Sat Feb 22 00:50:28 UTC 2025 I: starting to build snpsift/trixie/arm64 on jenkins on '2025-02-22 00:50'
Sat Feb 22 00:50:28 UTC 2025 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/arm64_1/61086/console.log
Sat Feb 22 00:50:28 UTC 2025 I: Downloading source for trixie/snpsift=5.2.e+dfsg-2
--2025-02-22 00:50:29-- http://deb.debian.org/debian/pool/main/s/snpsift/snpsift_5.2.e%2bdfsg-2.dsc
Connecting to 46.16.76.132:3128... connected.
Proxy request sent, awaiting response... 200 OK
Length: 2429 (2.4K) [text/prs.lines.tag]
Saving to: ‘snpsift_5.2.e+dfsg-2.dsc’
0K .. 100% 380M=0s
2025-02-22 00:50:29 (380 MB/s) - ‘snpsift_5.2.e+dfsg-2.dsc’ saved [2429/2429]
Sat Feb 22 00:50:29 UTC 2025 I: snpsift_5.2.e+dfsg-2.dsc
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 3.0 (quilt)
Source: snpsift
Binary: libsnpsift-java, snpsift, libsnpsift-java-doc
Architecture: all
Version: 5.2.e+dfsg-2
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Pierre Gruet <pgt@debian.org>
Homepage: https://pcingola.github.io/SnpEff/ss_introduction/
Standards-Version: 4.7.0
Vcs-Browser: https://salsa.debian.org/med-team/snpsift
Vcs-Git: https://salsa.debian.org/med-team/snpsift.git
Testsuite: autopkgtest
Testsuite-Triggers: default-jdk-headless, junit5
Build-Depends: debhelper-compat (= 13), antlr4, antlr4-doc, javahelper, junit5, libcommons-math3-java, libcommons-math3-java-doc, libhtsjdk-java, libhtsjdk-java-doc, libmaven-assembly-plugin-java, libmaven-javadoc-plugin-java, libsnpeff-java, libsnpeff-java-doc, libtrove3-java, libtrove3-java-doc, maven-debian-helper
Package-List:
libsnpsift-java deb java optional arch=all
libsnpsift-java-doc deb doc optional arch=all
snpsift deb java optional arch=all
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a6236daecdea20ffc9b6679090df6c30390ee316 7400 snpsift_5.2.e+dfsg-2.debian.tar.xz
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Files:
4178f3bca437f48b93596d5237392cdf 6505900 snpsift_5.2.e+dfsg.orig.tar.xz
b36b0e7b2b72fcca8b2222a15bc49b4b 7400 snpsift_5.2.e+dfsg-2.debian.tar.xz
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Sat Feb 22 00:50:29 UTC 2025 I: Checking whether the package is not for us
Sat Feb 22 00:50:29 UTC 2025 I: Starting 1st build on remote node codethink03-arm64.debian.net.
Sat Feb 22 00:50:29 UTC 2025 I: Preparing to do remote build '1' on codethink03-arm64.debian.net.
Sat Feb 22 01:07:01 UTC 2025 I: Deleting $TMPDIR on codethink03-arm64.debian.net.
I: pbuilder: network access will be disabled during build
I: Current time: Thu Mar 26 19:13:33 -12 2026
I: pbuilder-time-stamp: 1774595613
I: Building the build Environment
I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz]
I: copying local configuration
W: --override-config is not set; not updating apt.conf Read the manpage for details.
I: mounting /proc filesystem
I: mounting /sys filesystem
I: creating /{dev,run}/shm
I: mounting /dev/pts filesystem
I: redirecting /dev/ptmx to /dev/pts/ptmx
I: policy-rc.d already exists
I: Copying source file
I: copying [snpsift_5.2.e+dfsg-2.dsc]
I: copying [./snpsift_5.2.e+dfsg.orig.tar.xz]
I: copying [./snpsift_5.2.e+dfsg-2.debian.tar.xz]
I: Extracting source
dpkg-source: warning: cannot verify inline signature for ./snpsift_5.2.e+dfsg-2.dsc: unsupported subcommand
dpkg-source: info: extracting snpsift in snpsift-5.2.e+dfsg
dpkg-source: info: unpacking snpsift_5.2.e+dfsg.orig.tar.xz
dpkg-source: info: unpacking snpsift_5.2.e+dfsg-2.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying alter_pom_for_debian_packaging.patch
dpkg-source: info: applying omit_unused_junit_classes.patch
dpkg-source: info: applying Debian_specific_config_file.patch
dpkg-source: info: applying test_scope_for_junit.patch
I: Not using root during the build.
I: Installing the build-deps
I: user script /srv/workspace/pbuilder/1573939/tmp/hooks/D02_print_environment starting
I: set
BUILDDIR='/build/reproducible-path'
BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other'
BUILDUSERNAME='pbuilder1'
BUILD_ARCH='arm64'
DEBIAN_FRONTEND='noninteractive'
DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 '
DISTRIBUTION='trixie'
HOME='/root'
HOST_ARCH='arm64'
IFS='
'
INVOCATION_ID='63b9551a725947538e8c21c08fa5cdd8'
LANG='C'
LANGUAGE='en_US:en'
LC_ALL='C'
MAIL='/var/mail/root'
OPTIND='1'
PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games'
PBCURRENTCOMMANDLINEOPERATION='build'
PBUILDER_OPERATION='build'
PBUILDER_PKGDATADIR='/usr/share/pbuilder'
PBUILDER_PKGLIBDIR='/usr/lib/pbuilder'
PBUILDER_SYSCONFDIR='/etc'
PPID='1573939'
PS1='# '
PS2='> '
PS4='+ '
PWD='/'
SHELL='/bin/bash'
SHLVL='2'
SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.3ibxKXsF/pbuilderrc_lzUq --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.3ibxKXsF/b1 --logfile b1/build.log snpsift_5.2.e+dfsg-2.dsc'
SUDO_GID='109'
SUDO_UID='104'
SUDO_USER='jenkins'
TERM='unknown'
TZ='/usr/share/zoneinfo/Etc/GMT+12'
USER='root'
_='/usr/bin/systemd-run'
http_proxy='http://192.168.101.4:3128'
I: uname -a
Linux codethink03-arm64 6.1.0-31-cloud-arm64 #1 SMP Debian 6.1.128-1 (2025-02-07) aarch64 GNU/Linux
I: ls -l /bin
lrwxrwxrwx 1 root root 7 Nov 22 2024 /bin -> usr/bin
I: user script /srv/workspace/pbuilder/1573939/tmp/hooks/D02_print_environment finished
-> Attempting to satisfy build-dependencies
-> Creating pbuilder-satisfydepends-dummy package
Package: pbuilder-satisfydepends-dummy
Version: 0.invalid.0
Architecture: arm64
Maintainer: Debian Pbuilder Team <pbuilder-maint@lists.alioth.debian.org>
Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder
This package was created automatically by pbuilder to satisfy the
build-dependencies of the package being currently built.
Depends: debhelper-compat (= 13), antlr4, antlr4-doc, javahelper, junit5, libcommons-math3-java, libcommons-math3-java-doc, libhtsjdk-java, libhtsjdk-java-doc, libmaven-assembly-plugin-java, libmaven-javadoc-plugin-java, libsnpeff-java, libsnpeff-java-doc, libtrove3-java, libtrove3-java-doc, maven-debian-helper
dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'.
Selecting previously unselected package pbuilder-satisfydepends-dummy.
(Reading database ... 19923 files and directories currently installed.)
Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ...
Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ...
dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested:
pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however:
Package debhelper-compat is not installed.
pbuilder-satisfydepends-dummy depends on antlr4; however:
Package antlr4 is not installed.
pbuilder-satisfydepends-dummy depends on antlr4-doc; however:
Package antlr4-doc is not installed.
pbuilder-satisfydepends-dummy depends on javahelper; however:
Package javahelper is not installed.
pbuilder-satisfydepends-dummy depends on junit5; however:
Package junit5 is not installed.
pbuilder-satisfydepends-dummy depends on libcommons-math3-java; however:
Package libcommons-math3-java is not installed.
pbuilder-satisfydepends-dummy depends on libcommons-math3-java-doc; however:
Package libcommons-math3-java-doc is not installed.
pbuilder-satisfydepends-dummy depends on libhtsjdk-java; however:
Package libhtsjdk-java is not installed.
pbuilder-satisfydepends-dummy depends on libhtsjdk-java-doc; however:
Package libhtsjdk-java-doc is not installed.
pbuilder-satisfydepends-dummy depends on libmaven-assembly-plugin-java; however:
Package libmaven-assembly-plugin-java is not installed.
pbuilder-satisfydepends-dummy depends on libmaven-javadoc-plugin-java; however:
Package libmaven-javadoc-plugin-java is not installed.
pbuilder-satisfydepends-dummy depends on libsnpeff-java; however:
Package libsnpeff-java is not installed.
pbuilder-satisfydepends-dummy depends on libsnpeff-java-doc; however:
Package libsnpeff-java-doc is not installed.
pbuilder-satisfydepends-dummy depends on libtrove3-java; however:
Package libtrove3-java is not installed.
pbuilder-satisfydepends-dummy depends on libtrove3-java-doc; however:
Package libtrove3-java-doc is not installed.
pbuilder-satisfydepends-dummy depends on maven-debian-helper; however:
Package maven-debian-helper is not installed.
Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ...
Reading package lists...
Building dependency tree...
Reading state information...
Initializing package states...
Writing extended state information...
Building tag database...
pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0)
pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0)
The following NEW packages will be installed:
ant{a} ant-optional{a} antlr4{a} antlr4-doc{a} autoconf{a} automake{a} autopoint{a} autotools-dev{a} binfmt-support{a} bsdextrautils{a} ca-certificates{a} ca-certificates-java{a} dctrl-tools{a} debhelper{a} default-jdk-doc{a} default-jdk-headless{a} default-jre-headless{a} devscripts{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dirmngr{a} dwz{a} fastjar{a} file{a} fonts-mathjax{a} gettext{a} gettext-base{a} gnupg{a} gnupg-l10n{a} gpg{a} gpg-agent{a} gpgconf{a} gpgsm{a} gpgv{a} groff-base{a} intltool-debian{a} jarwrapper{a} java-common{a} javahelper{a} junit4{a} junit5{a} libactivation-java{a} libantlr3-runtime-java{a} libantlr4-runtime-java{a} libaopalliance-java{a} libapache-pom-java{a} libapfloat-java{a} libapiguardian-java{a} libarchive-zip-perl{a} libargs4j-java{a} libasm-java{a} libassuan9{a} libatinject-jsr330-api-java{a} libb-hooks-op-check-perl{a} libbiojava6-java{a} libbsh-java{a} libcdi-api-java{a} libcharts4j-java{a} libciftools-java{a} libclass-method-modifiers-perl{a} libclass-xsaccessor-perl{a} libclone-perl{a} libcodemodel-java{a} libcommons-beanutils-java{a} libcommons-cli-java{a} libcommons-codec-java{a} libcommons-collections3-java{a} libcommons-collections4-java{a} libcommons-compress-java{a} libcommons-digester-java{a} libcommons-exec-java{a} libcommons-io-java{a} libcommons-jexl2-java{a} libcommons-lang-java{a} libcommons-lang3-java{a} libcommons-logging-java{a} libcommons-math-java{a} libcommons-math3-java{a} libcommons-math3-java-doc{a} libcommons-parent-java{a} libcommons-text-java{a} libcommons-validator-java{a} libdebhelper-perl{a} libdevel-callchecker-perl{a} libdistlib-java{a} libdom4j-java{a} libdoxia-core-java{a} libdoxia-java{a} libdoxia-sitetools-java{a} libdtd-parser-java{a} libdynaloader-functions-perl{a} libel-api-java{a} libelf1t64{a} libencode-locale-perl{a} liberror-prone-java{a} libexec-maven-plugin-java{a} libexpat1{a} libezmorph-java{a} libfastinfoset-java{a} libfastutil-java{a} libffi8{a} libfile-dirlist-perl{a} libfile-homedir-perl{a} libfile-listing-perl{a} libfile-stripnondeterminism-perl{a} libfile-touch-perl{a} libfile-which-perl{a} libfreemarker-java{a} libgcrypt20{a} libgeronimo-annotation-1.3-spec-java{a} libgeronimo-interceptor-3.0-spec-java{a} libgnutls30t64{a} libgoogle-gson-java{a} libgpg-error0{a} libguava-java{a} libguice-java{a} libhamcrest-java{a} libhtml-parser-perl{a} libhtml-tagset-perl{a} libhtml-tree-perl{a} libhtsjdk-java{a} libhtsjdk-java-doc{a} libhttp-cookies-perl{a} libhttp-date-perl{a} libhttp-message-perl{a} libhttp-negotiate-perl{a} libhttpclient-java{a} libhttpcore-java{a} libicu4j-java{a} libicu72{a} libidn2-0{a} libimport-into-perl{a} libinchi1.07{a} libio-html-perl{a} libio-pty-perl{a} libio-socket-ssl-perl{a} libipc-run-perl{a} libistack-commons-java{a} libitext5-java{a} libjackson2-annotations-java{a} libjackson2-core-java{a} libjackson2-databind-java{a} libjansi-java{a} libjaxb-api-java{a} libjaxb-java{a} libjaxen-java{a} libjetty9-java{a} libjgrapht-java{a} libjgraphx-java{a} libjheaps-java{a} libjmol-java{a} libjni-inchi-java{a} libjni-inchi-jni{a} libjpeg62-turbo{a} libjs-jquery{a} libjs-jquery-ui{a} libjs-jquery-ui-theme-base{a} libjs-mathjax{a} libjson-java{a} libjson-simple-java{a} libjsonp-java{a} libjsoup-java{a} libjsp-api-java{a} libjsr305-java{a} libjtidy-java{a} libksba8{a} liblcms2-2{a} libldap2{a} liblog4j1.2-java{a} liblwp-mediatypes-perl{a} liblwp-protocol-https-perl{a} libmagic-mgc{a} libmagic1t64{a} libmaven-archiver-java{a} libmaven-artifact-transfer-java{a} libmaven-assembly-plugin-java{a} libmaven-clean-plugin-java{a} libmaven-common-artifact-filters-java{a} libmaven-compiler-plugin-java{a} libmaven-file-management-java{a} libmaven-filtering-java{a} libmaven-invoker-java{a} libmaven-jar-plugin-java{a} libmaven-javadoc-plugin-java{a} libmaven-parent-java{a} libmaven-plugin-tools-java{a} libmaven-reporting-api-java{a} libmaven-reporting-exec-java{a} libmaven-resolver-java{a} libmaven-resources-plugin-java{a} libmaven-shared-incremental-java{a} libmaven-shared-io-java{a} libmaven-shared-utils-java{a} libmaven-site-plugin-java{a} libmaven3-core-java{a} libmbedcrypto16{a} libmbedtls21{a} libmbedx509-7{a} libmmtf-java{a} libmodule-runtime-perl{a} libmoo-perl{a} libmsgpack-java{a} libnaga-java{a} libncbi-ngs3{a} libncbi-vdb3{a} libnet-http-perl{a} libnet-ssleay-perl{a} libngs-java{a} libngs-jni{a} libnpth0t64{a} libnspr4{a} libnss3{a} libopentest4j-java{a} libopentest4j-reporting-java{a} liboro-java{a} libp11-kit0{a} libparams-classify-perl{a} libpcsclite1{a} libpicocli-java{a} libpipeline1{a} libplexus-ant-factory-java{a} libplexus-archiver-java{a} libplexus-bsh-factory-java{a} libplexus-build-api-java{a} libplexus-cipher-java{a} libplexus-classworlds-java{a} libplexus-compiler-java{a} libplexus-component-annotations-java{a} libplexus-container-default-java{a} libplexus-container-default1.5-java{a} libplexus-i18n-java{a} libplexus-interactivity-api-java{a} libplexus-interpolation-java{a} libplexus-io-java{a} libplexus-languages-java{a} libplexus-sec-dispatcher-java{a} libplexus-utils2-java{a} libplexus-velocity-java{a} libplexus-xml-java{a} libproc2-0{a} libpython3-stdlib{a} libpython3.13-minimal{a} libpython3.13-stdlib{a} libqdox2-java{a} libreadline8t64{a} librelaxng-datatype-java{a} librhino-java{a} librngom-java{a} librole-tiny-perl{a} libsasl2-2{a} libsasl2-modules-db{a} libservlet-api-java{a} libsisu-inject-java{a} libsisu-plexus-java{a} libslf4j-java{a} libsnappy-java{a} libsnappy-jni{a} libsnappy1v5{a} libsnpeff-java{a} libsnpeff-java-doc{a} libstax-ex-java{a} libstreambuffer-java{a} libstringtemplate4-java{a} libsub-quote-perl{a} libsurefire-java{a} libtasn1-6{a} libtimedate-perl{a} libtool{a} libtreelayout-java{a} libtrove3-java{a} libtrove3-java-doc{a} libtry-tiny-perl{a} libtxw2-java{a} libuchardet0{a} libunistring5{a} libunivocity-parsers-java{a} liburi-perl{a} libvecmath-java{a} libvelocity-tools-java{a} libwagon-file-java{a} libwagon-http-java{a} libwagon-provider-api-java{a} libwebsocket-api-java{a} libwww-perl{a} libwww-robotrules-perl{a} libxbean-reflect-java{a} libxerces2-java{a} libxml-commons-external-java{a} libxml-commons-resolver1.1-java{a} libxml2{a} libxml2-utils{a} libxom-java{a} libxsom-java{a} libxz-java{a} m4{a} man-db{a} maven{a} maven-debian-helper{a} maven-repo-helper{a} media-types{a} ncbi-vdb-data{a} netbase{a} openjdk-21-doc{a} openjdk-21-jdk-headless{a} openjdk-21-jre-headless{a} openssl{a} patchutils{a} perl-openssl-defaults{a} pinentry-curses{a} po-debconf{a} procps{a} python3{a} python3-minimal{a} python3.13{a} python3.13-minimal{a} readline-common{a} sensible-utils{a} sgml-base{a} sopv-gpgv{a} tzdata{a} unzip{a} velocity{a} wdiff{a}
The following packages are RECOMMENDED but will NOT be installed:
curl debian-keyring dput dput-ng dupload equivs gnupg-utils gpg-wks-client javascript-common libarchive-cpio-perl libasound2t64 libbiojava6-java-doc libcups2t64 libdata-dump-perl libdistro-info-perl libfontconfig1 libfreetype6 libgit-wrapper-perl libgitlab-api-v4-perl libgpg-error-l10n libharfbuzz0b libhtml-form-perl libhtml-format-perl libhttp-daemon-perl libio-compress-brotli-perl libjline3-java libjson-perl libldap-common liblist-compare-perl libltdl-dev libmail-sendmail-perl libmailtools-perl libnamespace-clean-perl libsasl2-modules libsoap-lite-perl libstring-shellquote-perl libxstring-perl licensecheck lintian linux-sysctl-defaults lynx pristine-tar psmisc python3-apt python3-argcomplete python3-debian python3-magic python3-requests python3-unidiff python3-xdg strace wget
0 packages upgraded, 323 newly installed, 0 to remove and 0 not upgraded.
Need to get 311 MB of archives. After unpacking 1169 MB will be used.
Writing extended state information...
Get: 1 http://deb.debian.org/debian trixie/main arm64 libpipeline1 arm64 1.5.8-1 [40.2 kB]
Get: 2 http://deb.debian.org/debian trixie/main arm64 binfmt-support arm64 2.2.2-7+b1 [68.2 kB]
Get: 3 http://deb.debian.org/debian trixie/main arm64 libpython3.13-minimal arm64 3.13.2-1 [853 kB]
Get: 4 http://deb.debian.org/debian trixie/main arm64 libexpat1 arm64 2.6.4-1 [90.7 kB]
Get: 5 http://deb.debian.org/debian trixie/main arm64 python3.13-minimal arm64 3.13.2-1 [1997 kB]
Get: 6 http://deb.debian.org/debian trixie/main arm64 python3-minimal arm64 3.13.1-2 [27.0 kB]
Get: 7 http://deb.debian.org/debian trixie/main arm64 media-types all 10.1.0 [26.9 kB]
Get: 8 http://deb.debian.org/debian trixie/main arm64 netbase all 6.4 [12.8 kB]
Get: 9 http://deb.debian.org/debian trixie/main arm64 tzdata all 2025a-2 [259 kB]
Get: 10 http://deb.debian.org/debian trixie/main arm64 libffi8 arm64 3.4.7-1 [21.2 kB]
Get: 11 http://deb.debian.org/debian trixie/main arm64 readline-common all 8.2-6 [69.4 kB]
Get: 12 http://deb.debian.org/debian trixie/main arm64 libreadline8t64 arm64 8.2-6 [159 kB]
Get: 13 http://deb.debian.org/debian trixie/main arm64 libpython3.13-stdlib arm64 3.13.2-1 [1914 kB]
Get: 14 http://deb.debian.org/debian trixie/main arm64 python3.13 arm64 3.13.2-1 [745 kB]
Get: 15 http://deb.debian.org/debian trixie/main arm64 libpython3-stdlib arm64 3.13.1-2 [9952 B]
Get: 16 http://deb.debian.org/debian trixie/main arm64 python3 arm64 3.13.1-2 [28.0 kB]
Get: 17 http://deb.debian.org/debian trixie/main arm64 sgml-base all 1.31 [15.4 kB]
Get: 18 http://deb.debian.org/debian trixie/main arm64 libproc2-0 arm64 2:4.0.4-7 [62.4 kB]
Get: 19 http://deb.debian.org/debian trixie/main arm64 procps arm64 2:4.0.4-7 [868 kB]
Get: 20 http://deb.debian.org/debian trixie/main arm64 sensible-utils all 0.0.24 [24.8 kB]
Get: 21 http://deb.debian.org/debian trixie/main arm64 openssl arm64 3.4.1-1 [1390 kB]
Get: 22 http://deb.debian.org/debian trixie/main arm64 ca-certificates all 20241223 [164 kB]
Get: 23 http://deb.debian.org/debian trixie/main arm64 libmagic-mgc arm64 1:5.45-3+b1 [314 kB]
Get: 24 http://deb.debian.org/debian trixie/main arm64 libmagic1t64 arm64 1:5.45-3+b1 [102 kB]
Get: 25 http://deb.debian.org/debian trixie/main arm64 file arm64 1:5.45-3+b1 [43.4 kB]
Get: 26 http://deb.debian.org/debian trixie/main arm64 gettext-base arm64 0.23.1-1 [241 kB]
Get: 27 http://deb.debian.org/debian trixie/main arm64 libuchardet0 arm64 0.0.8-1+b2 [69.2 kB]
Get: 28 http://deb.debian.org/debian trixie/main arm64 groff-base arm64 1.23.0-7 [1129 kB]
Get: 29 http://deb.debian.org/debian trixie/main arm64 bsdextrautils arm64 2.40.4-3 [92.0 kB]
Get: 30 http://deb.debian.org/debian trixie/main arm64 man-db arm64 2.13.0-1 [1404 kB]
Get: 31 http://deb.debian.org/debian trixie/main arm64 ca-certificates-java all 20240118 [11.6 kB]
Get: 32 http://deb.debian.org/debian trixie/main arm64 java-common all 0.76 [6776 B]
Get: 33 http://deb.debian.org/debian trixie/main arm64 liblcms2-2 arm64 2.16-2 [151 kB]
Get: 34 http://deb.debian.org/debian trixie/main arm64 libjpeg62-turbo arm64 1:2.1.5-3+b1 [173 kB]
Get: 35 http://deb.debian.org/debian trixie/main arm64 libnspr4 arm64 2:4.36-1 [102 kB]
Get: 36 http://deb.debian.org/debian trixie/main arm64 libnss3 arm64 2:3.108-1 [1293 kB]
Get: 37 http://deb.debian.org/debian trixie/main arm64 libpcsclite1 arm64 2.3.1-1 [55.3 kB]
Get: 38 http://deb.debian.org/debian trixie/main arm64 openjdk-21-jre-headless arm64 21.0.6+7-1 [40.6 MB]
Get: 39 http://deb.debian.org/debian trixie/main arm64 default-jre-headless arm64 2:1.21-76 [3192 B]
Get: 40 http://deb.debian.org/debian trixie/main arm64 ant all 1.10.15-1 [2163 kB]
Get: 41 http://deb.debian.org/debian trixie/main arm64 ant-optional all 1.10.15-1 [456 kB]
Get: 42 http://deb.debian.org/debian trixie/main arm64 libantlr4-runtime-java all 4.9.2-3 [318 kB]
Get: 43 http://deb.debian.org/debian trixie/main arm64 libantlr3-runtime-java all 3.5.3-2 [165 kB]
Get: 44 http://deb.debian.org/debian trixie/main arm64 libicu4j-java all 73.2-1 [16.4 MB]
Get: 45 http://deb.debian.org/debian trixie/main arm64 libjsonp-java all 1.1.2-4 [127 kB]
Get: 46 http://deb.debian.org/debian trixie/main arm64 libstringtemplate4-java all 4.3.3-1 [247 kB]
Get: 47 http://deb.debian.org/debian trixie/main arm64 libtreelayout-java all 1.0.3-2 [27.0 kB]
Get: 48 http://deb.debian.org/debian trixie/main arm64 antlr4 all 4.9.2-3 [1399 kB]
Get: 49 http://deb.debian.org/debian trixie/main arm64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB]
Get: 50 http://deb.debian.org/debian trixie/main arm64 libjs-jquery-ui all 1.13.2+dfsg-1 [250 kB]
Get: 51 http://deb.debian.org/debian trixie/main arm64 libjs-jquery-ui-theme-base all 1.12.1+dfsg-1.1 [44.3 kB]
Get: 52 http://deb.debian.org/debian trixie/main arm64 openjdk-21-doc all 21.0.6+7-1 [13.2 MB]
Get: 53 http://deb.debian.org/debian trixie/main arm64 default-jdk-doc arm64 2:1.21-76 [3264 B]
Get: 54 http://deb.debian.org/debian trixie/main arm64 antlr4-doc all 4.9.2-3 [862 kB]
Get: 55 http://deb.debian.org/debian trixie/main arm64 m4 arm64 1.4.19-5 [284 kB]
Get: 56 http://deb.debian.org/debian trixie/main arm64 autoconf all 2.72-3 [493 kB]
Get: 57 http://deb.debian.org/debian trixie/main arm64 autotools-dev all 20220109.1 [51.6 kB]
Get: 58 http://deb.debian.org/debian trixie/main arm64 automake all 1:1.17-3 [862 kB]
Get: 59 http://deb.debian.org/debian trixie/main arm64 autopoint all 0.23.1-1 [770 kB]
Get: 60 http://deb.debian.org/debian trixie/main arm64 dctrl-tools arm64 2.24-3+b1 [125 kB]
Get: 61 http://deb.debian.org/debian trixie/main arm64 libdebhelper-perl all 13.24.1 [90.9 kB]
Get: 62 http://deb.debian.org/debian trixie/main arm64 libtool all 2.5.4-3 [539 kB]
Get: 63 http://deb.debian.org/debian trixie/main arm64 dh-autoreconf all 20 [17.1 kB]
Get: 64 http://deb.debian.org/debian trixie/main arm64 libarchive-zip-perl all 1.68-1 [104 kB]
Get: 65 http://deb.debian.org/debian trixie/main arm64 libfile-stripnondeterminism-perl all 1.14.1-2 [19.7 kB]
Get: 66 http://deb.debian.org/debian trixie/main arm64 dh-strip-nondeterminism all 1.14.1-2 [8620 B]
Get: 67 http://deb.debian.org/debian trixie/main arm64 libelf1t64 arm64 0.192-4 [189 kB]
Get: 68 http://deb.debian.org/debian trixie/main arm64 dwz arm64 0.15-1+b1 [102 kB]
Get: 69 http://deb.debian.org/debian trixie/main arm64 libunistring5 arm64 1.3-1 [449 kB]
Get: 70 http://deb.debian.org/debian trixie/main arm64 libicu72 arm64 72.1-6 [9239 kB]
Get: 71 http://deb.debian.org/debian trixie/main arm64 libxml2 arm64 2.12.7+dfsg+really2.9.14-0.2+b1 [630 kB]
Get: 72 http://deb.debian.org/debian trixie/main arm64 gettext arm64 0.23.1-1 [1610 kB]
Get: 73 http://deb.debian.org/debian trixie/main arm64 intltool-debian all 0.35.0+20060710.6 [22.9 kB]
Get: 74 http://deb.debian.org/debian trixie/main arm64 po-debconf all 1.0.21+nmu1 [248 kB]
Get: 75 http://deb.debian.org/debian trixie/main arm64 debhelper all 13.24.1 [920 kB]
Get: 76 http://deb.debian.org/debian trixie/main arm64 openjdk-21-jdk-headless arm64 21.0.6+7-1 [81.9 MB]
Get: 77 http://deb.debian.org/debian trixie/main arm64 default-jdk-headless arm64 2:1.21-76 [1124 B]
Get: 78 http://deb.debian.org/debian trixie/main arm64 libgpg-error0 arm64 1.51-3 [78.5 kB]
Get: 79 http://deb.debian.org/debian trixie/main arm64 libassuan9 arm64 3.0.1-2 [58.1 kB]
Get: 80 http://deb.debian.org/debian trixie/main arm64 libgcrypt20 arm64 1.11.0-7 [742 kB]
Get: 81 http://deb.debian.org/debian trixie/main arm64 gpgconf arm64 2.2.46-1+b1 [115 kB]
Get: 82 http://deb.debian.org/debian trixie/main arm64 libidn2-0 arm64 2.3.7-2+b1 [127 kB]
Get: 83 http://deb.debian.org/debian trixie/main arm64 libp11-kit0 arm64 0.25.5-3 [409 kB]
Get: 84 http://deb.debian.org/debian trixie/main arm64 libtasn1-6 arm64 4.20.0-2 [47.3 kB]
Get: 85 http://deb.debian.org/debian trixie/main arm64 libgnutls30t64 arm64 3.8.9-2 [1374 kB]
Get: 86 http://deb.debian.org/debian trixie/main arm64 libksba8 arm64 1.6.7-2+b1 [125 kB]
Get: 87 http://deb.debian.org/debian trixie/main arm64 libsasl2-modules-db arm64 2.1.28+dfsg1-8+b1 [20.3 kB]
Get: 88 http://deb.debian.org/debian trixie/main arm64 libsasl2-2 arm64 2.1.28+dfsg1-8+b1 [55.7 kB]
Get: 89 http://deb.debian.org/debian trixie/main arm64 libldap2 arm64 2.6.9+dfsg-1 [179 kB]
Get: 90 http://deb.debian.org/debian trixie/main arm64 libnpth0t64 arm64 1.8-2 [22.8 kB]
Get: 91 http://deb.debian.org/debian trixie/main arm64 dirmngr arm64 2.2.46-1+b1 [344 kB]
Get: 92 http://deb.debian.org/debian trixie/main arm64 gnupg-l10n all 2.2.46-1 [702 kB]
Get: 93 http://deb.debian.org/debian trixie/main arm64 gpg arm64 2.2.46-1+b1 [481 kB]
Get: 94 http://deb.debian.org/debian trixie/main arm64 pinentry-curses arm64 1.3.1-2 [83.5 kB]
Get: 95 http://deb.debian.org/debian trixie/main arm64 gpg-agent arm64 2.2.46-1+b1 [231 kB]
Get: 96 http://deb.debian.org/debian trixie/main arm64 gpgsm arm64 2.2.46-1+b1 [232 kB]
Get: 97 http://deb.debian.org/debian trixie/main arm64 gnupg all 2.2.46-1 [376 kB]
Get: 98 http://deb.debian.org/debian trixie/main arm64 gpgv arm64 2.2.46-1+b1 [200 kB]
Get: 99 http://deb.debian.org/debian trixie/main arm64 sopv-gpgv all 0.1.1-1 [10.7 kB]
Get: 100 http://deb.debian.org/debian trixie/main arm64 libfile-dirlist-perl all 0.05-3 [7600 B]
Get: 101 http://deb.debian.org/debian trixie/main arm64 libfile-which-perl all 1.27-2 [15.1 kB]
Get: 102 http://deb.debian.org/debian trixie/main arm64 libfile-homedir-perl all 1.006-2 [42.4 kB]
Get: 103 http://deb.debian.org/debian trixie/main arm64 libfile-touch-perl all 0.12-2 [8816 B]
Get: 104 http://deb.debian.org/debian trixie/main arm64 libio-pty-perl arm64 1:1.20-1+b2 [34.0 kB]
Get: 105 http://deb.debian.org/debian trixie/main arm64 libipc-run-perl all 20231003.0-2 [101 kB]
Get: 106 http://deb.debian.org/debian trixie/main arm64 libclass-method-modifiers-perl all 2.15-1 [18.0 kB]
Get: 107 http://deb.debian.org/debian trixie/main arm64 libclass-xsaccessor-perl arm64 1.19-4+b5 [34.9 kB]
Get: 108 http://deb.debian.org/debian trixie/main arm64 libb-hooks-op-check-perl arm64 0.22-3+b2 [10.6 kB]
Get: 109 http://deb.debian.org/debian trixie/main arm64 libdynaloader-functions-perl all 0.004-1 [12.1 kB]
Get: 110 http://deb.debian.org/debian trixie/main arm64 libdevel-callchecker-perl arm64 0.009-1+b1 [16.3 kB]
Get: 111 http://deb.debian.org/debian trixie/main arm64 libparams-classify-perl arm64 0.015-2+b4 [22.3 kB]
Get: 112 http://deb.debian.org/debian trixie/main arm64 libmodule-runtime-perl all 0.016-2 [19.6 kB]
Get: 113 http://deb.debian.org/debian trixie/main arm64 libimport-into-perl all 1.002005-2 [11.3 kB]
Get: 114 http://deb.debian.org/debian trixie/main arm64 librole-tiny-perl all 2.002004-1 [21.4 kB]
Get: 115 http://deb.debian.org/debian trixie/main arm64 libsub-quote-perl all 2.006008-1 [21.8 kB]
Get: 116 http://deb.debian.org/debian trixie/main arm64 libmoo-perl all 2.005005-1 [58.0 kB]
Get: 117 http://deb.debian.org/debian trixie/main arm64 libencode-locale-perl all 1.05-3 [12.9 kB]
Get: 118 http://deb.debian.org/debian trixie/main arm64 libtimedate-perl all 2.3300-2 [39.3 kB]
Get: 119 http://deb.debian.org/debian trixie/main arm64 libhttp-date-perl all 6.06-1 [10.7 kB]
Get: 120 http://deb.debian.org/debian trixie/main arm64 libfile-listing-perl all 6.16-1 [12.4 kB]
Get: 121 http://deb.debian.org/debian trixie/main arm64 libhtml-tagset-perl all 3.24-1 [14.7 kB]
Get: 122 http://deb.debian.org/debian trixie/main arm64 liburi-perl all 5.30-1 [105 kB]
Get: 123 http://deb.debian.org/debian trixie/main arm64 libhtml-parser-perl arm64 3.83-1+b2 [97.5 kB]
Get: 124 http://deb.debian.org/debian trixie/main arm64 libhtml-tree-perl all 5.07-3 [211 kB]
Get: 125 http://deb.debian.org/debian trixie/main arm64 libclone-perl arm64 0.47-1+b1 [13.7 kB]
Get: 126 http://deb.debian.org/debian trixie/main arm64 libio-html-perl all 1.004-3 [16.2 kB]
Get: 127 http://deb.debian.org/debian trixie/main arm64 liblwp-mediatypes-perl all 6.04-2 [20.2 kB]
Get: 128 http://deb.debian.org/debian trixie/main arm64 libhttp-message-perl all 7.00-2 [79.8 kB]
Get: 129 http://deb.debian.org/debian trixie/main arm64 libhttp-cookies-perl all 6.11-1 [19.1 kB]
Get: 130 http://deb.debian.org/debian trixie/main arm64 libhttp-negotiate-perl all 6.01-2 [13.1 kB]
Get: 131 http://deb.debian.org/debian trixie/main arm64 perl-openssl-defaults arm64 7+b2 [6712 B]
Get: 132 http://deb.debian.org/debian trixie/main arm64 libnet-ssleay-perl arm64 1.94-3 [323 kB]
Get: 133 http://deb.debian.org/debian trixie/main arm64 libio-socket-ssl-perl all 2.089-1 [223 kB]
Get: 134 http://deb.debian.org/debian trixie/main arm64 libnet-http-perl all 6.23-1 [23.9 kB]
Get: 135 http://deb.debian.org/debian trixie/main arm64 liblwp-protocol-https-perl all 6.14-1 [10.8 kB]
Get: 136 http://deb.debian.org/debian trixie/main arm64 libtry-tiny-perl all 0.32-1 [22.9 kB]
Get: 137 http://deb.debian.org/debian trixie/main arm64 libwww-robotrules-perl all 6.02-1 [12.9 kB]
Get: 138 http://deb.debian.org/debian trixie/main arm64 libwww-perl all 6.77-1 [183 kB]
Get: 139 http://deb.debian.org/debian trixie/main arm64 patchutils arm64 0.4.2-1+b1 [71.3 kB]
Get: 140 http://deb.debian.org/debian trixie/main arm64 wdiff arm64 1.2.2-7 [121 kB]
Get: 141 http://deb.debian.org/debian trixie/main arm64 devscripts all 2.25.2 [1058 kB]
Get: 142 http://deb.debian.org/debian trixie/main arm64 fastjar arm64 2:0.98-7+b1 [74.9 kB]
Get: 143 http://deb.debian.org/debian trixie/main arm64 fonts-mathjax all 2.7.9+dfsg-1 [2210 kB]
Get: 144 http://deb.debian.org/debian trixie/main arm64 jarwrapper all 0.80 [9692 B]
Get: 145 http://deb.debian.org/debian trixie/main arm64 javahelper all 0.80 [80.4 kB]
Get: 146 http://deb.debian.org/debian trixie/main arm64 libhamcrest-java all 2.2-2 [121 kB]
Get: 147 http://deb.debian.org/debian trixie/main arm64 junit4 all 4.13.2-5 [350 kB]
Get: 148 http://deb.debian.org/debian trixie/main arm64 libapiguardian-java all 1.1.2-1 [4656 B]
Get: 149 http://deb.debian.org/debian trixie/main arm64 libopentest4j-java all 1.2.0-4 [9516 B]
Get: 150 http://deb.debian.org/debian trixie/main arm64 libopentest4j-reporting-java all 0.1.0-M1-2 [49.0 kB]
Get: 151 http://deb.debian.org/debian trixie/main arm64 libpicocli-java all 4.6.2-2 [390 kB]
Get: 152 http://deb.debian.org/debian trixie/main arm64 libunivocity-parsers-java all 2.9.1-1 [397 kB]
Get: 153 http://deb.debian.org/debian trixie/main arm64 junit5 all 5.10.3-1 [2459 kB]
Get: 154 http://deb.debian.org/debian trixie/main arm64 libactivation-java all 1.2.0-2 [84.7 kB]
Get: 155 http://deb.debian.org/debian trixie/main arm64 libaopalliance-java all 20070526-7 [8572 B]
Get: 156 http://deb.debian.org/debian trixie/main arm64 libapache-pom-java all 33-2 [5852 B]
Get: 157 http://deb.debian.org/debian trixie/main arm64 libapfloat-java all 1.14.0-2 [725 kB]
Get: 158 http://deb.debian.org/debian trixie/main arm64 libargs4j-java all 2.33-2 [138 kB]
Get: 159 http://deb.debian.org/debian trixie/main arm64 libasm-java all 9.7.1-1 [391 kB]
Get: 160 http://deb.debian.org/debian trixie/main arm64 libatinject-jsr330-api-java all 1.0+ds1-6 [5112 B]
Get: 161 http://deb.debian.org/debian trixie/main arm64 libgeronimo-annotation-1.3-spec-java all 1.3-1 [11.1 kB]
Get: 162 http://deb.debian.org/debian trixie/main arm64 libgoogle-gson-java all 2.10.1-1 [262 kB]
Get: 163 http://deb.debian.org/debian trixie/main arm64 libciftools-java all 6.0.0-1 [2211 kB]
Get: 164 http://deb.debian.org/debian trixie/main arm64 libcommons-parent-java all 56-1 [10.8 kB]
Get: 165 http://deb.debian.org/debian trixie/main arm64 libcommons-codec-java all 1.17.1-1 [303 kB]
Get: 166 http://deb.debian.org/debian trixie/main arm64 libcommons-math-java all 2.2-9 [933 kB]
Get: 167 http://deb.debian.org/debian trixie/main arm64 liberror-prone-java all 2.18.0-1 [22.5 kB]
Get: 168 http://deb.debian.org/debian trixie/main arm64 libjsr305-java all 0.1~+svn49-12 [26.6 kB]
Get: 169 http://deb.debian.org/debian trixie/main arm64 libguava-java all 32.0.1-1 [2708 kB]
Get: 170 http://deb.debian.org/debian trixie/main arm64 libitext5-java all 5.5.13.3-4 [2667 kB]
Get: 171 http://deb.debian.org/debian trixie/main arm64 libjackson2-annotations-java all 2.14.0-1 [68.8 kB]
Get: 172 http://deb.debian.org/debian trixie/main arm64 libjackson2-core-java all 2.14.1-1 [447 kB]
Get: 173 http://deb.debian.org/debian trixie/main arm64 libjackson2-databind-java all 2.14.0+ds-1 [1532 kB]
Get: 174 http://deb.debian.org/debian trixie/main arm64 libjaxb-api-java all 2.3.1-1 [119 kB]
Get: 175 http://deb.debian.org/debian trixie/main arm64 libjaxen-java all 1.1.6-5 [214 kB]
Get: 176 http://deb.debian.org/debian trixie/main arm64 libdom4j-java all 2.1.4-1 [312 kB]
Get: 177 http://deb.debian.org/debian trixie/main arm64 libcommons-io-java all 2.18.0-1 [509 kB]
Get: 178 http://deb.debian.org/debian trixie/main arm64 libslf4j-java all 1.7.32-1 [144 kB]
Get: 179 http://deb.debian.org/debian trixie/main arm64 libmaven-shared-utils-java all 3.4.2-1 [137 kB]
Get: 180 http://deb.debian.org/debian trixie/main arm64 libcommons-cli-java all 1.6.0-1 [60.4 kB]
Get: 181 http://deb.debian.org/debian trixie/main arm64 libguice-java all 5.1.0-1 [932 kB]
Get: 182 http://deb.debian.org/debian trixie/main arm64 libmaven-parent-java all 43-2 [6252 B]
Get: 183 http://deb.debian.org/debian trixie/main arm64 libcommons-lang3-java all 3.17.0-1 [641 kB]
Get: 184 http://deb.debian.org/debian trixie/main arm64 libplexus-utils2-java all 3.4.2-1 [258 kB]
Get: 185 http://deb.debian.org/debian trixie/main arm64 libwagon-provider-api-java all 3.5.3-1 [48.2 kB]
Get: 186 http://deb.debian.org/debian trixie/main arm64 libmaven-resolver-java all 1.9.22-1 [729 kB]
Get: 187 http://deb.debian.org/debian trixie/main arm64 libplexus-cipher-java all 2.0-1 [14.9 kB]
Get: 188 http://deb.debian.org/debian trixie/main arm64 libplexus-classworlds-java all 2.7.0-1 [50.6 kB]
Get: 189 http://deb.debian.org/debian trixie/main arm64 libplexus-component-annotations-java all 2.1.1-1 [7660 B]
Get: 190 http://deb.debian.org/debian trixie/main arm64 libplexus-interpolation-java all 1.27-1 [76.8 kB]
Get: 191 http://deb.debian.org/debian trixie/main arm64 libplexus-sec-dispatcher-java all 2.0-3 [28.3 kB]
Get: 192 http://deb.debian.org/debian trixie/main arm64 libgeronimo-interceptor-3.0-spec-java all 1.0.1-5 [8444 B]
Get: 193 http://deb.debian.org/debian trixie/main arm64 libcdi-api-java all 1.2-4 [55.3 kB]
Get: 194 http://deb.debian.org/debian trixie/main arm64 libsisu-inject-java all 0.3.5-1 [352 kB]
Get: 195 http://deb.debian.org/debian trixie/main arm64 libsisu-plexus-java all 0.3.5-1 [183 kB]
Get: 196 http://deb.debian.org/debian trixie/main arm64 libmaven3-core-java all 3.9.9-1 [1661 kB]
Get: 197 http://deb.debian.org/debian trixie/main arm64 libmaven-shared-io-java all 3.0.0-4 [33.2 kB]
Get: 198 http://deb.debian.org/debian trixie/main arm64 libmaven-file-management-java all 3.0.0-2 [35.1 kB]
Get: 199 http://deb.debian.org/debian trixie/main arm64 libcommons-compress-java all 1.27.1-2 [641 kB]
Get: 200 http://deb.debian.org/debian trixie/main arm64 libplexus-io-java all 3.3.1-2 [65.3 kB]
Get: 201 http://deb.debian.org/debian trixie/main arm64 libsnappy1v5 arm64 1.2.1-1+b1 [28.7 kB]
Get: 202 http://deb.debian.org/debian trixie/main arm64 libsnappy-jni arm64 1.1.10.7-1 [6476 B]
Get: 203 http://deb.debian.org/debian trixie/main arm64 libsnappy-java all 1.1.10.7-1 [87.6 kB]
Get: 204 http://deb.debian.org/debian trixie/main arm64 libxz-java all 1.9-1 [143 kB]
Get: 205 http://deb.debian.org/debian trixie/main arm64 libplexus-archiver-java all 4.6.1-1 [187 kB]
Get: 206 http://deb.debian.org/debian trixie/main arm64 libhttpcore-java all 4.4.16-1 [636 kB]
Get: 207 http://deb.debian.org/debian trixie/main arm64 libcommons-logging-java all 1.3.0-1 [68.6 kB]
Get: 208 http://deb.debian.org/debian trixie/main arm64 libhttpclient-java all 4.5.14-1 [1247 kB]
Get: 209 http://deb.debian.org/debian trixie/main arm64 libjsoup-java all 1.15.3-1 [431 kB]
Get: 210 http://deb.debian.org/debian trixie/main arm64 libwagon-http-java all 3.5.3-1 [49.5 kB]
Get: 211 http://deb.debian.org/debian trixie/main arm64 libistack-commons-java all 3.0.6-5 [145 kB]
Get: 212 http://deb.debian.org/debian trixie/main arm64 libcodemodel-java all 2.6+jaxb2.3.0.1-11 [164 kB]
Get: 213 http://deb.debian.org/debian trixie/main arm64 librelaxng-datatype-java all 1.0+ds1-4 [11.8 kB]
Get: 214 http://deb.debian.org/debian trixie/main arm64 librngom-java all 2.3.0.1-11 [292 kB]
Get: 215 http://deb.debian.org/debian trixie/main arm64 libxsom-java all 2.3.0.1-11 [401 kB]
Get: 216 http://deb.debian.org/debian trixie/main arm64 libtxw2-java all 2.3.0.1-11 [134 kB]
Get: 217 http://deb.debian.org/debian trixie/main arm64 libxml-commons-resolver1.1-java all 1.2-11 [98.3 kB]
Get: 218 http://deb.debian.org/debian trixie/main arm64 libdtd-parser-java all 1.2-1 [64.9 kB]
Get: 219 http://deb.debian.org/debian trixie/main arm64 libstax-ex-java all 1.7.8-3 [40.9 kB]
Get: 220 http://deb.debian.org/debian trixie/main arm64 libstreambuffer-java all 1.5.4-1.1 [74.0 kB]
Get: 221 http://deb.debian.org/debian trixie/main arm64 libfastinfoset-java all 1.2.12-4 [347 kB]
Get: 222 http://deb.debian.org/debian trixie/main arm64 libjaxb-java all 2.3.0.1-11 [1980 kB]
Get: 223 http://deb.debian.org/debian trixie/main arm64 libmaven-archiver-java all 3.6.2-1 [26.1 kB]
Get: 224 http://deb.debian.org/debian trixie/main arm64 libmaven-jar-plugin-java all 3.3.0-2 [24.0 kB]
Get: 225 http://deb.debian.org/debian trixie/main arm64 libcommons-text-java all 1.12.0-1 [222 kB]
Get: 226 http://deb.debian.org/debian trixie/main arm64 libfastutil-java all 8.5.15+dfsg-1 [20.0 MB]
Get: 227 http://deb.debian.org/debian trixie/main arm64 libjheaps-java all 0.14-2 [144 kB]
Get: 228 http://deb.debian.org/debian trixie/main arm64 libxml-commons-external-java all 1.4.01-6 [240 kB]
Get: 229 http://deb.debian.org/debian trixie/main arm64 libxerces2-java all 2.12.2-1 [1440 kB]
Get: 230 http://deb.debian.org/debian trixie/main arm64 libjgraphx-java all 2.1.0.7-5 [809 kB]
Get: 231 http://deb.debian.org/debian trixie/main arm64 libjgrapht-java all 1.5.2-1 [1610 kB]
Get: 232 http://deb.debian.org/debian trixie/main arm64 libinchi1.07 arm64 1.07.2+dfsg-1 [500 kB]
Get: 233 http://deb.debian.org/debian trixie/main arm64 libjni-inchi-jni arm64 0.8+dfsg-8 [9480 B]
Get: 234 http://deb.debian.org/debian trixie/main arm64 libcommons-exec-java all 1.3-2 [48.1 kB]
Get: 235 http://deb.debian.org/debian trixie/main arm64 libexec-maven-plugin-java all 3.1.0-2 [66.7 kB]
Get: 236 http://deb.debian.org/debian trixie/main arm64 libmaven-shared-incremental-java all 1.1-6 [9916 B]
Get: 237 http://deb.debian.org/debian trixie/main arm64 libcommons-lang-java all 2.6-10 [273 kB]
Get: 238 http://deb.debian.org/debian trixie/main arm64 libxbean-reflect-java all 4.5-9 [132 kB]
Get: 239 http://deb.debian.org/debian trixie/main arm64 libplexus-container-default-java all 2.1.1-1 [193 kB]
Get: 240 http://deb.debian.org/debian trixie/main arm64 libplexus-compiler-java all 2.13.0-1 [99.5 kB]
Get: 241 http://deb.debian.org/debian trixie/main arm64 libqdox2-java all 2.0.3-1 [296 kB]
Get: 242 http://deb.debian.org/debian trixie/main arm64 libplexus-languages-java all 1.1.1-2 [47.3 kB]
Get: 243 http://deb.debian.org/debian trixie/main arm64 libmaven-compiler-plugin-java all 3.13.0-1 [78.8 kB]
Get: 244 http://deb.debian.org/debian trixie/main arm64 liblog4j1.2-java all 1.2.17-11 [444 kB]
Get: 245 http://deb.debian.org/debian trixie/main arm64 libjni-inchi-java all 0.8+dfsg-8 [33.6 kB]
Get: 246 http://deb.debian.org/debian trixie/main arm64 libnaga-java all 3.0+svn80-5 [43.5 kB]
Get: 247 http://deb.debian.org/debian trixie/main arm64 libjmol-java all 16.2.33+dfsg-1 [10.4 MB]
Get: 248 http://deb.debian.org/debian trixie/main arm64 libjson-simple-java all 2.3.0-2 [61.7 kB]
Get: 249 http://deb.debian.org/debian trixie/main arm64 libmsgpack-java all 0.9.6-1 [161 kB]
Get: 250 http://deb.debian.org/debian trixie/main arm64 libmmtf-java all 1.0.11-1 [187 kB]
Get: 251 http://deb.debian.org/debian trixie/main arm64 libvecmath-java all 1.5.2-7 [97.0 kB]
Get: 252 http://deb.debian.org/debian trixie/main arm64 libbiojava6-java all 6.1.0+dfsg-5 [5359 kB]
Get: 253 http://deb.debian.org/debian trixie/main arm64 libbsh-java all 2.0b4-20 [291 kB]
Get: 254 http://deb.debian.org/debian trixie/main arm64 libcharts4j-java all 1.3-4 [162 kB]
Get: 255 http://deb.debian.org/debian trixie/main arm64 libcommons-collections3-java all 3.2.2-3 [530 kB]
Get: 256 http://deb.debian.org/debian trixie/main arm64 libcommons-beanutils-java all 1.9.4-2 [233 kB]
Get: 257 http://deb.debian.org/debian trixie/main arm64 libcommons-collections4-java all 4.4-2 [682 kB]
Get: 258 http://deb.debian.org/debian trixie/main arm64 libcommons-digester-java all 1.8.1-7 [138 kB]
Get: 259 http://deb.debian.org/debian trixie/main arm64 libcommons-jexl2-java all 2.1.1-6 [256 kB]
Get: 260 http://deb.debian.org/debian trixie/main arm64 libcommons-math3-java all 3.6.1-4 [2040 kB]
Get: 261 http://deb.debian.org/debian trixie/main arm64 libjs-mathjax all 2.7.9+dfsg-1 [5667 kB]
Get: 262 http://deb.debian.org/debian trixie/main arm64 libcommons-math3-java-doc all 3.6.1-4 [3106 kB]
Get: 263 http://deb.debian.org/debian trixie/main arm64 libcommons-validator-java all 1:1.9.0-1 [191 kB]
Get: 264 http://deb.debian.org/debian trixie/main arm64 libdistlib-java all 1.0-5 [72.5 kB]
Get: 265 http://deb.debian.org/debian trixie/main arm64 libdoxia-core-java all 2.0.0-1 [149 kB]
Get: 266 http://deb.debian.org/debian trixie/main arm64 libplexus-xml-java all 3.0.1-2 [93.7 kB]
Get: 267 http://deb.debian.org/debian trixie/main arm64 libdoxia-java all 2.0.0-1 [113 kB]
Get: 268 http://deb.debian.org/debian trixie/main arm64 libmaven-reporting-api-java all 4.0.0-1 [6724 B]
Get: 269 http://deb.debian.org/debian trixie/main arm64 libplexus-i18n-java all 1.0-beta-10-6 [13.4 kB]
Get: 270 http://deb.debian.org/debian trixie/main arm64 velocity all 1.7-7 [431 kB]
Get: 271 http://deb.debian.org/debian trixie/main arm64 libplexus-velocity-java all 1.2-4 [9676 B]
Get: 272 http://deb.debian.org/debian trixie/main arm64 liboro-java all 2.0.8a-14 [70.5 kB]
Get: 273 http://deb.debian.org/debian trixie/main arm64 libvelocity-tools-java all 2.0-9 [311 kB]
Get: 274 http://deb.debian.org/debian trixie/main arm64 libdoxia-sitetools-java all 2.0.0-1 [176 kB]
Get: 275 http://deb.debian.org/debian trixie/main arm64 libel-api-java all 3.0.0-3 [64.9 kB]
Get: 276 http://deb.debian.org/debian trixie/main arm64 libezmorph-java all 1.0.6-4 [75.9 kB]
Get: 277 http://deb.debian.org/debian trixie/main arm64 libfreemarker-java all 2.3.32-2 [1546 kB]
Get: 278 http://deb.debian.org/debian trixie/main arm64 libxom-java all 1.3.9-1 [174 kB]
Get: 279 http://deb.debian.org/debian trixie/main arm64 libjson-java all 3.1.0+dfsg-2 [142 kB]
Get: 280 http://deb.debian.org/debian trixie/main arm64 libmbedcrypto16 arm64 3.6.2-3 [341 kB]
Get: 281 http://deb.debian.org/debian trixie/main arm64 libmbedx509-7 arm64 3.6.2-3 [146 kB]
Get: 282 http://deb.debian.org/debian trixie/main arm64 libmbedtls21 arm64 3.6.2-3 [222 kB]
Get: 283 http://deb.debian.org/debian trixie/main arm64 ncbi-vdb-data all 3.0.9+dfsg-2 [74.0 kB]
Get: 284 http://deb.debian.org/debian trixie/main arm64 libncbi-vdb3 arm64 3.0.9+dfsg-2 [1110 kB]
Get: 285 http://deb.debian.org/debian trixie/main arm64 libncbi-ngs3 arm64 3.0.9+dfsg-7+b2 [143 kB]
Get: 286 http://deb.debian.org/debian trixie/main arm64 libngs-jni arm64 3.0.9+dfsg-7+b2 [25.9 kB]
Get: 287 http://deb.debian.org/debian trixie/main arm64 libngs-java arm64 3.0.9+dfsg-7+b2 [112 kB]
Get: 288 http://deb.debian.org/debian trixie/main arm64 librhino-java all 1.7.15-1 [1382 kB]
Get: 289 http://deb.debian.org/debian trixie/main arm64 libhtsjdk-java all 4.1.3+dfsg-2 [1841 kB]
Get: 290 http://deb.debian.org/debian trixie/main arm64 libhtsjdk-java-doc all 4.1.3+dfsg-2 [1063 kB]
Get: 291 http://deb.debian.org/debian trixie/main arm64 libjansi-java all 2.4.1-2 [100 kB]
Get: 292 http://deb.debian.org/debian trixie/main arm64 libjsp-api-java all 2.3.4-3 [53.7 kB]
Get: 293 http://deb.debian.org/debian trixie/main arm64 libservlet-api-java all 4.0.1-2 [81.0 kB]
Get: 294 http://deb.debian.org/debian trixie/main arm64 libwebsocket-api-java all 1.1-2 [40.1 kB]
Get: 295 http://deb.debian.org/debian trixie/main arm64 libjetty9-java all 9.4.56-1 [2964 kB]
Get: 296 http://deb.debian.org/debian trixie/main arm64 libjtidy-java all 7+svn20110807-6 [251 kB]
Get: 297 http://deb.debian.org/debian trixie/main arm64 libmaven-common-artifact-filters-java all 3.4.0-1 [47.7 kB]
Get: 298 http://deb.debian.org/debian trixie/main arm64 libmaven-artifact-transfer-java all 0.13.1-2 [158 kB]
Get: 299 http://deb.debian.org/debian trixie/main arm64 libplexus-build-api-java all 0.0.7-4 [10.3 kB]
Get: 300 http://deb.debian.org/debian trixie/main arm64 libmaven-filtering-java all 3.4.0-1 [51.4 kB]
Get: 301 http://deb.debian.org/debian trixie/main arm64 libmaven-assembly-plugin-java all 3.4.2-2 [242 kB]
Get: 302 http://deb.debian.org/debian trixie/main arm64 libmaven-clean-plugin-java all 3.2.0-2 [32.2 kB]
Get: 303 http://deb.debian.org/debian trixie/main arm64 libmaven-invoker-java all 3.3.0-1 [29.1 kB]
Get: 304 http://deb.debian.org/debian trixie/main arm64 libplexus-interactivity-api-java all 1.3-1 [11.6 kB]
Get: 305 http://deb.debian.org/debian trixie/main arm64 libmaven-javadoc-plugin-java all 3.10.1-2 [451 kB]
Get: 306 http://deb.debian.org/debian trixie/main arm64 libplexus-container-default1.5-java all 2.1.1-1 [4476 B]
Get: 307 http://deb.debian.org/debian trixie/main arm64 libplexus-ant-factory-java all 1.0~alpha2.1-4 [11.4 kB]
Get: 308 http://deb.debian.org/debian trixie/main arm64 libplexus-bsh-factory-java all 1.0~alpha7-5 [8360 B]
Get: 309 http://deb.debian.org/debian trixie/main arm64 libmaven-plugin-tools-java all 3.10.2-1 [245 kB]
Get: 310 http://deb.debian.org/debian trixie/main arm64 libmaven-reporting-exec-java all 2.0.0-1 [23.9 kB]
Get: 311 http://deb.debian.org/debian trixie/main arm64 libmaven-resources-plugin-java all 3.3.1-1 [27.5 kB]
Get: 312 http://deb.debian.org/debian trixie/main arm64 libmaven-site-plugin-java all 3.21.0-1 [106 kB]
Get: 313 http://deb.debian.org/debian trixie/main arm64 libtrove3-java all 3.0.3-5 [2146 kB]
Get: 314 http://deb.debian.org/debian trixie/main arm64 libsnpeff-java all 5.2.f+dfsg-1 [2156 kB]
Get: 315 http://deb.debian.org/debian trixie/main arm64 libsnpeff-java-doc all 5.2.f+dfsg-1 [1295 kB]
Get: 316 http://deb.debian.org/debian trixie/main arm64 libsurefire-java all 2.22.3-3 [1284 kB]
Get: 317 http://deb.debian.org/debian trixie/main arm64 libtrove3-java-doc all 3.0.3-5 [823 kB]
Get: 318 http://deb.debian.org/debian trixie/main arm64 libwagon-file-java all 3.5.3-1 [8388 B]
Get: 319 http://deb.debian.org/debian trixie/main arm64 libxml2-utils arm64 2.12.7+dfsg+really2.9.14-0.2+b1 [97.7 kB]
Get: 320 http://deb.debian.org/debian trixie/main arm64 maven all 3.9.9-1 [19.7 kB]
Get: 321 http://deb.debian.org/debian trixie/main arm64 maven-repo-helper all 1.11 [142 kB]
Get: 322 http://deb.debian.org/debian trixie/main arm64 unzip arm64 6.0-28+b1 [158 kB]
Get: 323 http://deb.debian.org/debian trixie/main arm64 maven-debian-helper all 2.6.7 [108 kB]
Fetched 311 MB in 11s (27.8 MB/s)
Preconfiguring packages ...
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Setting up libpython3.13-minimal:arm64 (3.13.2-1) ...
Setting up libexpat1:arm64 (2.6.4-1) ...
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Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8 to /lib/aarch64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64'
Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8.2 to /lib/aarch64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64'
Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8 to /lib/aarch64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64'
Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8.2 to /lib/aarch64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64'
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Setting up python3-minimal (3.13.1-2) ...
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Unpacking libmagic1t64:arm64 (1:5.45-3+b1) ...
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Unpacking file (1:5.45-3+b1) ...
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Unpacking gettext-base (0.23.1-1) ...
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Setting up libncbi-vdb3:arm64 (3.0.9+dfsg-2) ...
Setting up python3 (3.13.1-2) ...
Setting up sopv-gpgv (0.1.1-1) ...
update-alternatives: using /usr/bin/sopv-gpgv to provide /usr/bin/sopv (sopv) in auto mode
Setting up man-db (2.13.0-1) ...
Not building database; man-db/auto-update is not 'true'.
Setting up dirmngr (2.2.46-1+b1) ...
Setting up libmaven-filtering-java (3.4.0-1) ...
Setting up openjdk-21-doc (21.0.6+7-1) ...
Setting up libmaven-resolver-java (1.9.22-1) ...
Setting up libmodule-runtime-perl (0.016-2) ...
Setting up libhttpclient-java (4.5.14-1) ...
Setting up libmaven-common-artifact-filters-java (3.4.0-1) ...
Setting up gnupg (2.2.46-1) ...
Setting up libwagon-http-java (3.5.3-1) ...
Setting up libmaven-shared-utils-java (3.4.2-1) ...
Setting up libfastinfoset-java (1.2.12-4) ...
Setting up libmaven-resources-plugin-java (3.3.1-1) ...
Setting up libncbi-ngs3:arm64 (3.0.9+dfsg-7+b2) ...
Setting up libngs-jni:arm64 (3.0.9+dfsg-7+b2) ...
Setting up libplexus-io-java (3.3.1-2) ...
Setting up libcommons-compress-java (1.27.1-2) ...
Setting up libcommons-validator-java (1:1.9.0-1) ...
Setting up libimport-into-perl (1.002005-2) ...
Setting up libmoo-perl (2.005005-1) ...
Setting up libmaven-invoker-java (3.3.0-1) ...
Setting up debhelper (13.24.1) ...
Setting up default-jdk-doc (2:1.21-76) ...
Setting up antlr4-doc (4.9.2-3) ...
Setting up libmaven-clean-plugin-java (3.2.0-2) ...
Setting up libplexus-archiver-java (4.6.1-1) ...
Setting up libngs-java:arm64 (3.0.9+dfsg-7+b2) ...
Setting up libmaven-archiver-java (3.6.2-1) ...
Setting up liblwp-protocol-https-perl (6.14-1) ...
Setting up liberror-prone-java (2.18.0-1) ...
Setting up libwww-perl (6.77-1) ...
Setting up devscripts (2.25.2) ...
Setting up libguava-java (32.0.1-1) ...
Setting up javahelper (0.80) ...
Setting up libplexus-container-default-java (2.1.1-1) ...
Setting up libguice-java (5.1.0-1) ...
Setting up libplexus-i18n-java (1.0-beta-10-6) ...
Setting up libplexus-container-default1.5-java (2.1.1-1) ...
Setting up libplexus-velocity-java (1.2-4) ...
Setting up libmaven3-core-java (3.9.9-1) ...
Setting up libmaven-shared-incremental-java (1.1-6) ...
Setting up libmaven-shared-io-java (3.0.0-4) ...
Setting up libplexus-bsh-factory-java (1.0~alpha7-5) ...
Setting up libplexus-compiler-java (2.13.0-1) ...
Setting up libmaven-compiler-plugin-java (3.13.0-1) ...
Setting up libjni-inchi-java (0.8+dfsg-8) ...
Setting up libmaven-artifact-transfer-java (0.13.1-2) ...
Setting up libmaven-file-management-java (3.0.0-2) ...
Setting up libjmol-java (16.2.33+dfsg-1) ...
Setting up libmaven-jar-plugin-java (3.3.0-2) ...
Setting up libmaven-assembly-plugin-java (3.4.2-2) ...
Setting up libcommons-text-java (1.12.0-1) ...
Setting up libmsgpack-java (0.9.6-1) ...
Setting up libmmtf-java (1.0.11-1) ...
Setting up libjgrapht-java (1.5.2-1) ...
Setting up libdoxia-core-java (2.0.0-1) ...
Setting up libdoxia-java (2.0.0-1) ...
Setting up libmaven-reporting-api-java (4.0.0-1) ...
Setting up libmaven-reporting-exec-java (2.0.0-1) ...
Processing triggers for libc-bin (2.40-7) ...
Processing triggers for ca-certificates-java (20240118) ...
Adding debian:ACCVRAIZ1.pem
Adding debian:AC_RAIZ_FNMT-RCM.pem
Adding debian:AC_RAIZ_FNMT-RCM_SERVIDORES_SEGUROS.pem
Adding debian:ANF_Secure_Server_Root_CA.pem
Adding debian:Actalis_Authentication_Root_CA.pem
Adding debian:AffirmTrust_Commercial.pem
Adding debian:AffirmTrust_Networking.pem
Adding debian:AffirmTrust_Premium.pem
Adding debian:AffirmTrust_Premium_ECC.pem
Adding debian:Amazon_Root_CA_1.pem
Adding debian:Amazon_Root_CA_2.pem
Adding debian:Amazon_Root_CA_3.pem
Adding debian:Amazon_Root_CA_4.pem
Adding debian:Atos_TrustedRoot_2011.pem
Adding debian:Atos_TrustedRoot_Root_CA_ECC_TLS_2021.pem
Adding debian:Atos_TrustedRoot_Root_CA_RSA_TLS_2021.pem
Adding debian:Autoridad_de_Certificacion_Firmaprofesional_CIF_A62634068.pem
Adding debian:BJCA_Global_Root_CA1.pem
Adding debian:BJCA_Global_Root_CA2.pem
Adding debian:Baltimore_CyberTrust_Root.pem
Adding debian:Buypass_Class_2_Root_CA.pem
Adding debian:Buypass_Class_3_Root_CA.pem
Adding debian:CA_Disig_Root_R2.pem
Adding debian:CFCA_EV_ROOT.pem
Adding debian:COMODO_Certification_Authority.pem
Adding debian:COMODO_ECC_Certification_Authority.pem
Adding debian:COMODO_RSA_Certification_Authority.pem
Adding debian:Certainly_Root_E1.pem
Adding debian:Certainly_Root_R1.pem
Adding debian:Certigna.pem
Adding debian:Certigna_Root_CA.pem
Adding debian:Certum_EC-384_CA.pem
Adding debian:Certum_Trusted_Network_CA.pem
Adding debian:Certum_Trusted_Network_CA_2.pem
Adding debian:Certum_Trusted_Root_CA.pem
Adding debian:CommScope_Public_Trust_ECC_Root-01.pem
Adding debian:CommScope_Public_Trust_ECC_Root-02.pem
Adding debian:CommScope_Public_Trust_RSA_Root-01.pem
Adding debian:CommScope_Public_Trust_RSA_Root-02.pem
Adding debian:Comodo_AAA_Services_root.pem
Adding debian:D-TRUST_BR_Root_CA_1_2020.pem
Adding debian:D-TRUST_EV_Root_CA_1_2020.pem
Adding debian:D-TRUST_Root_Class_3_CA_2_2009.pem
Adding debian:D-TRUST_Root_Class_3_CA_2_EV_2009.pem
Adding debian:DigiCert_Assured_ID_Root_CA.pem
Adding debian:DigiCert_Assured_ID_Root_G2.pem
Adding debian:DigiCert_Assured_ID_Root_G3.pem
Adding debian:DigiCert_Global_Root_CA.pem
Adding debian:DigiCert_Global_Root_G2.pem
Adding debian:DigiCert_Global_Root_G3.pem
Adding debian:DigiCert_High_Assurance_EV_Root_CA.pem
Adding debian:DigiCert_TLS_ECC_P384_Root_G5.pem
Adding debian:DigiCert_TLS_RSA4096_Root_G5.pem
Adding debian:DigiCert_Trusted_Root_G4.pem
Adding debian:Entrust.net_Premium_2048_Secure_Server_CA.pem
Adding debian:Entrust_Root_Certification_Authority.pem
Adding debian:Entrust_Root_Certification_Authority_-_EC1.pem
Adding debian:Entrust_Root_Certification_Authority_-_G2.pem
Adding debian:Entrust_Root_Certification_Authority_-_G4.pem
Adding debian:FIRMAPROFESIONAL_CA_ROOT-A_WEB.pem
Adding debian:GDCA_TrustAUTH_R5_ROOT.pem
Adding debian:GLOBALTRUST_2020.pem
Adding debian:GTS_Root_R1.pem
Adding debian:GTS_Root_R2.pem
Adding debian:GTS_Root_R3.pem
Adding debian:GTS_Root_R4.pem
Adding debian:GlobalSign_ECC_Root_CA_-_R4.pem
Adding debian:GlobalSign_ECC_Root_CA_-_R5.pem
Adding debian:GlobalSign_Root_CA.pem
Adding debian:GlobalSign_Root_CA_-_R3.pem
Adding debian:GlobalSign_Root_CA_-_R6.pem
Adding debian:GlobalSign_Root_E46.pem
Adding debian:GlobalSign_Root_R46.pem
Adding debian:Go_Daddy_Class_2_CA.pem
Adding debian:Go_Daddy_Root_Certificate_Authority_-_G2.pem
Adding debian:HARICA_TLS_ECC_Root_CA_2021.pem
Adding debian:HARICA_TLS_RSA_Root_CA_2021.pem
Adding debian:Hellenic_Academic_and_Research_Institutions_ECC_RootCA_2015.pem
Adding debian:Hellenic_Academic_and_Research_Institutions_RootCA_2015.pem
Adding debian:HiPKI_Root_CA_-_G1.pem
Adding debian:Hongkong_Post_Root_CA_3.pem
Adding debian:ISRG_Root_X1.pem
Adding debian:ISRG_Root_X2.pem
Adding debian:IdenTrust_Commercial_Root_CA_1.pem
Adding debian:IdenTrust_Public_Sector_Root_CA_1.pem
Adding debian:Izenpe.com.pem
Adding debian:Microsec_e-Szigno_Root_CA_2009.pem
Adding debian:Microsoft_ECC_Root_Certificate_Authority_2017.pem
Adding debian:Microsoft_RSA_Root_Certificate_Authority_2017.pem
Adding debian:NAVER_Global_Root_Certification_Authority.pem
Adding debian:NetLock_Arany_=Class_Gold=_Főtanúsítvány.pem
Adding debian:OISTE_WISeKey_Global_Root_GB_CA.pem
Adding debian:OISTE_WISeKey_Global_Root_GC_CA.pem
Adding debian:QuoVadis_Root_CA_1_G3.pem
Adding debian:QuoVadis_Root_CA_2.pem
Adding debian:QuoVadis_Root_CA_2_G3.pem
Adding debian:QuoVadis_Root_CA_3.pem
Adding debian:QuoVadis_Root_CA_3_G3.pem
Adding debian:SSL.com_EV_Root_Certification_Authority_ECC.pem
Adding debian:SSL.com_EV_Root_Certification_Authority_RSA_R2.pem
Adding debian:SSL.com_Root_Certification_Authority_ECC.pem
Adding debian:SSL.com_Root_Certification_Authority_RSA.pem
Adding debian:SSL.com_TLS_ECC_Root_CA_2022.pem
Adding debian:SSL.com_TLS_RSA_Root_CA_2022.pem
Adding debian:SZAFIR_ROOT_CA2.pem
Adding debian:Sectigo_Public_Server_Authentication_Root_E46.pem
Adding debian:Sectigo_Public_Server_Authentication_Root_R46.pem
Adding debian:SecureSign_RootCA11.pem
Adding debian:SecureSign_Root_CA12.pem
Adding debian:SecureSign_Root_CA14.pem
Adding debian:SecureSign_Root_CA15.pem
Adding debian:SecureTrust_CA.pem
Adding debian:Secure_Global_CA.pem
Adding debian:Security_Communication_ECC_RootCA1.pem
Adding debian:Security_Communication_RootCA2.pem
Adding debian:Security_Communication_RootCA3.pem
Adding debian:Starfield_Class_2_CA.pem
Adding debian:Starfield_Root_Certificate_Authority_-_G2.pem
Adding debian:Starfield_Services_Root_Certificate_Authority_-_G2.pem
Adding debian:SwissSign_Gold_CA_-_G2.pem
Adding debian:SwissSign_Silver_CA_-_G2.pem
Adding debian:T-TeleSec_GlobalRoot_Class_2.pem
Adding debian:T-TeleSec_GlobalRoot_Class_3.pem
Adding debian:TUBITAK_Kamu_SM_SSL_Kok_Sertifikasi_-_Surum_1.pem
Adding debian:TWCA_CYBER_Root_CA.pem
Adding debian:TWCA_Global_Root_CA.pem
Adding debian:TWCA_Root_Certification_Authority.pem
Adding debian:Telekom_Security_TLS_ECC_Root_2020.pem
Adding debian:Telekom_Security_TLS_RSA_Root_2023.pem
Adding debian:TeliaSonera_Root_CA_v1.pem
Adding debian:Telia_Root_CA_v2.pem
Adding debian:TrustAsia_Global_Root_CA_G3.pem
Adding debian:TrustAsia_Global_Root_CA_G4.pem
Adding debian:Trustwave_Global_Certification_Authority.pem
Adding debian:Trustwave_Global_ECC_P256_Certification_Authority.pem
Adding debian:Trustwave_Global_ECC_P384_Certification_Authority.pem
Adding debian:TunTrust_Root_CA.pem
Adding debian:UCA_Extended_Validation_Root.pem
Adding debian:UCA_Global_G2_Root.pem
Adding debian:USERTrust_ECC_Certification_Authority.pem
Adding debian:USERTrust_RSA_Certification_Authority.pem
Adding debian:XRamp_Global_CA_Root.pem
Adding debian:certSIGN_ROOT_CA.pem
Adding debian:certSIGN_Root_CA_G2.pem
Adding debian:e-Szigno_Root_CA_2017.pem
Adding debian:ePKI_Root_Certification_Authority.pem
Adding debian:emSign_ECC_Root_CA_-_C3.pem
Adding debian:emSign_ECC_Root_CA_-_G3.pem
Adding debian:emSign_Root_CA_-_C1.pem
Adding debian:emSign_Root_CA_-_G1.pem
Adding debian:vTrus_ECC_Root_CA.pem
Adding debian:vTrus_Root_CA.pem
done.
Setting up maven-repo-helper (1.11) ...
Setting up maven (3.9.9-1) ...
update-alternatives: using /usr/share/maven/bin/mvn to provide /usr/bin/mvn (mvn) in auto mode
Setting up ant (1.10.15-1) ...
Setting up junit4 (4.13.2-5) ...
Setting up openjdk-21-jdk-headless:arm64 (21.0.6+7-1) ...
update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jar to provide /usr/bin/jar (jar) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jarsigner to provide /usr/bin/jarsigner (jarsigner) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/javac to provide /usr/bin/javac (javac) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/javadoc to provide /usr/bin/javadoc (javadoc) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/javap to provide /usr/bin/javap (javap) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jcmd to provide /usr/bin/jcmd (jcmd) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jdb to provide /usr/bin/jdb (jdb) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jdeprscan to provide /usr/bin/jdeprscan (jdeprscan) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jdeps to provide /usr/bin/jdeps (jdeps) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jfr to provide /usr/bin/jfr (jfr) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jimage to provide /usr/bin/jimage (jimage) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jinfo to provide /usr/bin/jinfo (jinfo) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jlink to provide /usr/bin/jlink (jlink) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jmap to provide /usr/bin/jmap (jmap) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jmod to provide /usr/bin/jmod (jmod) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jps to provide /usr/bin/jps (jps) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jrunscript to provide /usr/bin/jrunscript (jrunscript) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jshell to provide /usr/bin/jshell (jshell) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jstack to provide /usr/bin/jstack (jstack) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jstat to provide /usr/bin/jstat (jstat) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jstatd to provide /usr/bin/jstatd (jstatd) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jwebserver to provide /usr/bin/jwebserver (jwebserver) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/serialver to provide /usr/bin/serialver (serialver) in auto mode
update-alternatives: using /usr/lib/jvm/java-21-openjdk-arm64/bin/jhsdb to provide /usr/bin/jhsdb (jhsdb) in auto mode
Setting up default-jre-headless (2:1.21-76) ...
Setting up antlr4 (4.9.2-3) ...
Setting up libplexus-ant-factory-java (1.0~alpha2.1-4) ...
Setting up ant-optional (1.10.15-1) ...
Setting up default-jdk-headless (2:1.21-76) ...
Setting up junit5 (5.10.3-1) ...
Setting up libjson-java (3.1.0+dfsg-2) ...
Setting up libhtsjdk-java (4.1.3+dfsg-2) ...
Setting up libmaven-plugin-tools-java (3.10.2-1) ...
Setting up libistack-commons-java (3.0.6-5) ...
Setting up libsurefire-java (2.22.3-3) ...
Setting up libcodemodel-java (2.6+jaxb2.3.0.1-11) ...
Setting up libtxw2-java (2.3.0.1-11) ...
Setting up libjaxb-java (2.3.0.1-11) ...
Setting up libbiojava6-java (6.1.0+dfsg-5) ...
Setting up libsnpeff-java (5.2.f+dfsg-1) ...
Processing triggers for sgml-base (1.31) ...
Setting up libvelocity-tools-java (2.0-9) ...
Setting up libdoxia-sitetools-java (2.0.0-1) ...
Setting up libmaven-site-plugin-java (3.21.0-1) ...
Setting up maven-debian-helper (2.6.7) ...
Setting up libmaven-javadoc-plugin-java (3.10.1-2) ...
Processing triggers for ca-certificates (20241223) ...
Updating certificates in /etc/ssl/certs...
0 added, 0 removed; done.
Running hooks in /etc/ca-certificates/update.d...
done.
Processing triggers for ca-certificates-java (20240118) ...
done.
Reading package lists...
Building dependency tree...
Reading state information...
Reading extended state information...
Initializing package states...
Writing extended state information...
Building tag database...
-> Finished parsing the build-deps
I: Building the package
I: Running cd /build/reproducible-path/snpsift-5.2.e+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../snpsift_5.2.e+dfsg-2_source.changes
dpkg-buildpackage: info: source package snpsift
dpkg-buildpackage: info: source version 5.2.e+dfsg-2
dpkg-buildpackage: info: source distribution unstable
dpkg-buildpackage: info: source changed by Pierre Gruet <pgt@debian.org>
dpkg-source --before-build .
dpkg-buildpackage: info: host architecture arm64
debian/rules clean
dh clean --with javahelper
dh_auto_clean
bash -c "for dir in \$(find . -name target -type d); do if [ -f \$(echo \$dir | sed -e s/target\$/pom.xml/) ]; then rm -Rf \$dir; fi done"
mh_unpatchpoms -plibsnpsift-java
jh_clean
Duplicate specification "unlink|u" for option "u"
debian/rules override_dh_clean
make[1]: Entering directory '/build/reproducible-path/snpsift-5.2.e+dfsg'
# Removing all the sidx files created during the tests. Then one of them must
# be restored, it has been saved prior to the tests.
find . \( -name "*.sidx" -a ! -name "gnomad_db_multiple_entries.vcf.sidx" \) -delete
if [ -e test/ann/gnomad_db_multiple_entries.vcf.sidx.old ]; then \
mv test/ann/gnomad_db_multiple_entries.vcf.sidx.old test/ann/gnomad_db_multiple_entries.vcf.sidx; \
fi
# Restoring another file modified during the tests
if [ -e test/gt_test.01.gt.vcf.old ]; then \
mv test/gt_test.01.gt.vcf.old test/gt_test.01.gt.vcf; \
fi
dh_clean
make[1]: Leaving directory '/build/reproducible-path/snpsift-5.2.e+dfsg'
debian/rules binary
dh binary --with javahelper
dh_update_autotools_config
dh_autoreconf
dh_auto_configure
mh_patchpoms -plibsnpsift-java --debian-build --keep-pom-version --maven-repo=/build/reproducible-path/snpsift-5.2.e\+dfsg/debian/maven-repo
Failed to parse /build/reproducible-path/snpsift-5.2.e+dfsg/debian/maven-repo/org/biojava/biojava-structure/6.1.0/biojava-structure-6.1.0.pom
javax.xml.stream.XMLStreamException: ParseError at [row,col]:[117,21]
Message: Element type "debian.org.rcsb." must be followed by either attribute specifications, ">" or "/>".
at java.xml/com.sun.org.apache.xerces.internal.impl.XMLStreamReaderImpl.next(XMLStreamReaderImpl.java:652)
at org.debian.maven.repo.POMReader.readPom(POMReader.java:82)
at org.debian.maven.repo.POMReader.readPom(POMReader.java:57)
at org.debian.maven.repo.Repository.scan(Repository.java:397)
at org.debian.maven.repo.Repository.scan(Repository.java:394)
at org.debian.maven.repo.Repository.scan(Repository.java:394)
at org.debian.maven.repo.Repository.scan(Repository.java:394)
at org.debian.maven.repo.Repository.scan(Repository.java:394)
at org.debian.maven.repo.Repository.scan(Repository.java:201)
at org.debian.maven.repo.Repository.scanOnce(Repository.java:196)
at org.debian.maven.repo.POMTransformer.usePluginVersionsFromRepository(POMTransformer.java:107)
at org.debian.maven.repo.POMTransformer.main(POMTransformer.java:779)
Failed to parse /build/reproducible-path/snpsift-5.2.e+dfsg/debian/maven-repo/org/biojava/biojava-structure/6.x/biojava-structure-6.x.pom
javax.xml.stream.XMLStreamException: ParseError at [row,col]:[117,21]
Message: Element type "debian.org.rcsb." must be followed by either attribute specifications, ">" or "/>".
at java.xml/com.sun.org.apache.xerces.internal.impl.XMLStreamReaderImpl.next(XMLStreamReaderImpl.java:652)
at org.debian.maven.repo.POMReader.readPom(POMReader.java:82)
at org.debian.maven.repo.POMReader.readPom(POMReader.java:57)
at org.debian.maven.repo.Repository.scan(Repository.java:397)
at org.debian.maven.repo.Repository.scan(Repository.java:394)
at org.debian.maven.repo.Repository.scan(Repository.java:394)
at org.debian.maven.repo.Repository.scan(Repository.java:394)
at org.debian.maven.repo.Repository.scan(Repository.java:394)
at org.debian.maven.repo.Repository.scan(Repository.java:201)
at org.debian.maven.repo.Repository.scanOnce(Repository.java:196)
at org.debian.maven.repo.POMTransformer.usePluginVersionsFromRepository(POMTransformer.java:107)
at org.debian.maven.repo.POMTransformer.main(POMTransformer.java:779)
jh_linkjars
dh_auto_build
/usr/lib/jvm/default-java/bin/java -noverify -cp /usr/share/maven/boot/plexus-classworlds-2.x.jar -Dmaven.home=/usr/share/maven -Dmaven.multiModuleProjectDirectory=/build/reproducible-path/snpsift-5.2.e\+dfsg -Dclassworlds.conf=/etc/maven/m2-debian.conf org.codehaus.plexus.classworlds.launcher.Launcher -s/etc/maven/settings-debian.xml -Ddebian.dir=/build/reproducible-path/snpsift-5.2.e\+dfsg/debian -Dmaven.repo.local=/build/reproducible-path/snpsift-5.2.e\+dfsg/debian/maven-repo --batch-mode package javadoc:jar javadoc:aggregate -DskipTests -Dnotimestamp=true -Dlocale=en_US
OpenJDK 64-Bit Server VM warning: Options -Xverify:none and -noverify were deprecated in JDK 13 and will likely be removed in a future release.
[INFO] Scanning for projects...
[INFO]
[INFO] ------------------------< org.snpsift:snpsift >-------------------------
[INFO] Building SnpSift 5.2
[INFO] from pom.xml
[INFO] --------------------------------[ jar ]---------------------------------
[WARNING] The artifact org.apache.maven.plugins:maven-surefire-plugin:jar:2.17 has been relocated to org.apache.maven.plugins:maven-surefire-plugin:jar:2.22.3
[WARNING] The artifact org.apache.maven.plugins:maven-jar-plugin:jar:3.1.2 has been relocated to org.apache.maven.plugins:maven-jar-plugin:jar:3.3.0
[WARNING] The POM for org.biojava:biojava-structure:jar:6.x is invalid, transitive dependencies (if any) will not be available: 1 problem was encountered while building the effective model
[FATAL] Non-parseable POM /build/reproducible-path/snpsift-5.2.e+dfsg/debian/maven-repo/org/biojava/biojava-structure/6.x/biojava-structure-6.x.pom: start tag unexpected character $ (position: TEXT seen ...org.jgrapht.jgrapht-core.originalVersion>\n\t\t\n\t\t\t<debian.org.rcsb.$... @117:22) @ line 117, column 22
[INFO]
[INFO] --- resources:3.3.1:resources (default-resources) @ snpsift ---
[INFO] skip non existing resourceDirectory /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/resources
[INFO]
[INFO] --- compiler:3.13.0:compile (default-compile) @ snpsift ---
[INFO] Recompiling the module because of changed source code.
[INFO] Compiling 144 source files with javac [debug deprecation release 21] to target/classes
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/lang/LangFactory.java:[112,25] org.antlr.v4.runtime.ANTLRInputStream in org.antlr.v4.runtime has been deprecated
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/lang/LangFactory.java:[112,54] org.antlr.v4.runtime.ANTLRInputStream in org.antlr.v4.runtime has been deprecated
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/hwe/VcfHwe.java:[116,45] factorialLog(int) in org.apache.commons.math3.util.ArithmeticUtils has been deprecated
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/hwe/VcfHwe.java:[116,80] factorialLog(int) in org.apache.commons.math3.util.ArithmeticUtils has been deprecated
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/hwe/VcfHwe.java:[116,116] factorialLog(int) in org.apache.commons.math3.util.ArithmeticUtils has been deprecated
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/hwe/VcfHwe.java:[116,152] factorialLog(int) in org.apache.commons.math3.util.ArithmeticUtils has been deprecated
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/hwe/VcfHwe.java:[117,45] factorialLog(int) in org.apache.commons.math3.util.ArithmeticUtils has been deprecated
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/hwe/VcfHwe.java:[117,84] factorialLog(int) in org.apache.commons.math3.util.ArithmeticUtils has been deprecated
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/hwe/VcfHwe.java:[117,119] factorialLog(int) in org.apache.commons.math3.util.ArithmeticUtils has been deprecated
[INFO]
[INFO] --- resources:3.3.1:testResources (default-testResources) @ snpsift ---
[INFO] skip non existing resourceDirectory /build/reproducible-path/snpsift-5.2.e+dfsg/src/test/resources
[INFO]
[INFO] --- compiler:3.13.0:testCompile (default-testCompile) @ snpsift ---
[INFO] Recompiling the module because of changed dependency.
[INFO] Compiling 46 source files with javac [debug deprecation release 21] to target/test-classes
[INFO]
[INFO] --- surefire:2.22.3:test (default-test) @ snpsift ---
[INFO] Tests are skipped.
[INFO]
[INFO] --- jar:3.3.0:jar (default-jar) @ snpsift ---
[INFO] Building jar: /build/reproducible-path/snpsift-5.2.e+dfsg/target/snpsift-5.2.jar
[INFO]
[INFO] --- javadoc:3.10.1:jar (default-cli) @ snpsift ---
[INFO] Adding the --ignore-source-errors option
[INFO] No previous run data found, generating javadoc.
[WARNING] Javadoc Warnings
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/annotate/mem/dataFrame/dataFrameColumn/DataFrameColumnString.java:34: warning: @param argument "dataSize" is not a parameter name.
[WARNING] * @param dataSize: Total size of all strings (i.e. memory used)
[WARNING] ^
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/lang/expression/FieldIterator.java:31: warning: @param argument "starType" is not a parameter name.
[WARNING] * @param starType
[WARNING] ^
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/lang/expression/FieldIterator.java:32: warning: @param argument "max" is not a parameter name.
[WARNING] * @param max
[WARNING] ^
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/lang/expression/FieldIterator.java:138: warning: @param argument "starType" is not a parameter name.
[WARNING] * @param starType
[WARNING] ^
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/gwasCatalog/GwasCatalog.java:38: warning: invalid input: '&'
[WARNING] * Get all entries at a given chromosome & position
[WARNING] ^
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/gwasCatalog/GwasCatalog.java:38: warning: invalid input: '&'
[WARNING] * Get all entries at a given chromosome & position
[WARNING] ^
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/lang/LangFactory.java:99: warning: invalid input: '&'
[WARNING] * Create an AST from a program (using ANTLR lexer & parser)
[WARNING] ^
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/lang/LangFactory.java:99: warning: invalid input: '&'
[WARNING] * Create an AST from a program (using ANTLR lexer & parser)
[WARNING] ^
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/pedigree/PedigreeDraw.java:552: warning: @return tag cannot be used in method with void return type.
[WARNING] public void line(Individual parent1, Individual parent2, Individual child) {
[WARNING] ^
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/pedigree/PedigreeDraw.java:612: warning: @param argument "xpos" is not a parameter name.
[WARNING] * @param xpos
[WARNING] ^
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/pedigree/PedigreeDraw.java:626: warning: @param argument "xpos" is not a parameter name.
[WARNING] * @param xpos
[WARNING] ^
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/SnpSiftCmdAnnotate.java:403: warning: invalid input: '&'
[WARNING] * @param createList : If true, return a list with all annotated entries (used for test cases & debugging)
[WARNING] ^
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/SnpSiftCmdAnnotateMem.java:290: warning: invalid input: '&'
[WARNING] * @param createList : If true, return a list with all annotated entries (used for test cases & debugging)
[WARNING] ^
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/SnpSiftCmdFilter.java:32: warning: invalid input: '<'
[WARNING] * - Int, double fields: FiledZZ == N, FiledZZ < X, FiledZZ > X, FiledZZ <= X, FiledZZ >= X
[WARNING] ^
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/SnpSiftCmdFilter.java:32: warning: invalid input: '<'
[WARNING] * - Int, double fields: FiledZZ == N, FiledZZ < X, FiledZZ > X, FiledZZ <= X, FiledZZ >= X
[WARNING] ^
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/SnpSiftCmdFilterGt.java:25: warning: invalid input: '<'
[WARNING] * e.g. if the expression is "GQ < 20", all genotypes
[WARNING] ^
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/SnpSiftCmdIntervals.java:101: warning: @param argument "fileName" is not a parameter name.
[WARNING] * @param fileName
[WARNING] ^
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/SnpSiftCmdIntervalsIndex.java:55: warning: @param argument "bedFileNames" is not a parameter name.
[WARNING] * @param bedFileNames
[WARNING] ^
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/SnpSiftCmdIntervalsIndex.java:127: warning: @param argument "fileName" is not a parameter name.
[WARNING] * @param fileName
[WARNING] ^
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/SnpSiftCmdPedShow.java:106: warning: @param argument "tfamFile" is not a parameter name.
[WARNING] * @param tfamFile
[WARNING] ^
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/SnpSiftCmdPedShow.java:107: warning: @param argument "vcfFileName" is not a parameter name.
[WARNING] * @param vcfFileName
[WARNING] ^
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/SnpSiftCmdPedShow.java:108: warning: @param argument "outputDir" is not a parameter name.
[WARNING] * @param outputDir
[WARNING] ^
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/SnpSiftCmdPedShow.java:109: warning: @param argument "chrPos" is not a parameter name.
[WARNING] * @param chrPos
[WARNING] ^
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/SnpSiftCmdSort.java:16: warning: invalid input: '&'
[WARNING] * Sort VCF file/s by chromosome & position
[WARNING] ^
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/SnpSiftCmdVcf2Tped.java:179: warning: @param argument "tpedFile" is not a parameter name.
[WARNING] * @param tpedFile
[WARNING] ^
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/annotate/mem/arrays/StringArrayBase.java:32: warning: @param argument "numElements" is not a parameter name.
[WARNING] * @param numElements : Number of elements in the array
[WARNING] ^
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/annotate/mem/database/VariantDatabase.java:230: warning: @param argument "databaseVcfFileName" is not a parameter name.
[WARNING] * @param databaseVcfFileName
[WARNING] ^
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/hwe/VcfHwe.java:12: warning: invalid input: '&'
[WARNING] * "Principles of population genetics", Hartl & Clark
[WARNING] ^
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/hwe/VcfHwe.java:96: warning: invalid input: '&'
[WARNING] * "Principles of population genetics", Hartl & Clark, page 58 (formula 2.5)
[WARNING] ^
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/hwe/VcfHwe.java:187: warning: invalid input: '&'
[WARNING] * "Principles of population genetics", Hartl & Clark, page 58 (formula 2.5)
[WARNING] ^
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/hwe/VcfHwe.java:96: warning: invalid input: '&'
[WARNING] * "Principles of population genetics", Hartl & Clark, page 58 (formula 2.5)
[WARNING] ^
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/hwe/VcfHwe.java:131: warning: invalid input: '&'
[WARNING] * References: "Principles of population genetics", Hartl & Clark, page 58
[WARNING] ^
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/hwe/VcfHwe.java:187: warning: invalid input: '&'
[WARNING] * "Principles of population genetics", Hartl & Clark, page 58 (formula 2.5)
[WARNING] ^
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/VcfLd.java:12: warning: invalid input: '&'
[WARNING] * Reference: "Principles of population genetics (4th edition)" Hartl & Clark, pages 73 to 81
[WARNING] ^
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/SnpSiftCmdSort.java:16: warning: invalid input: '&'
[WARNING] * Sort VCF file/s by chromosome & position
[WARNING] ^
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/VcfLd.java:12: warning: invalid input: '&'
[WARNING] * Reference: "Principles of population genetics (4th edition)" Hartl & Clark, pages 73 to 81
[WARNING] ^
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/SnpSiftCmdSort.java:16: warning: invalid input: '&'
[WARNING] * Sort VCF file/s by chromosome & position
[WARNING] ^
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/lang/LangFactory.java:99: warning: invalid input: '&'
[WARNING] * Create an AST from a program (using ANTLR lexer & parser)
[WARNING] ^
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/gwasCatalog/GwasCatalog.java:38: warning: invalid input: '&'
[WARNING] * Get all entries at a given chromosome & position
[WARNING] ^
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/SnpSiftCmdSort.java:16: warning: invalid input: '&'
[WARNING] * Sort VCF file/s by chromosome & position
[WARNING] ^
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/VcfLd.java:12: warning: invalid input: '&'
[WARNING] * Reference: "Principles of population genetics (4th edition)" Hartl & Clark, pages 73 to 81
[WARNING] ^
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/lang/LangFactory.java:99: warning: invalid input: '&'
[WARNING] * Create an AST from a program (using ANTLR lexer & parser)
[WARNING] ^
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/gwasCatalog/GwasCatalog.java:38: warning: invalid input: '&'
[WARNING] * Get all entries at a given chromosome & position
[WARNING] ^
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/hwe/VcfHwe.java:96: warning: invalid input: '&'
[WARNING] * "Principles of population genetics", Hartl & Clark, page 58 (formula 2.5)
[WARNING] ^
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/hwe/VcfHwe.java:187: warning: invalid input: '&'
[WARNING] * "Principles of population genetics", Hartl & Clark, page 58 (formula 2.5)
[WARNING] ^
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/SnpSiftCmdSort.java:16: warning: invalid input: '&'
[WARNING] * Sort VCF file/s by chromosome & position
[WARNING] ^
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/VcfLd.java:12: warning: invalid input: '&'
[WARNING] * Reference: "Principles of population genetics (4th edition)" Hartl & Clark, pages 73 to 81
[WARNING] ^
[WARNING] 47 warnings
[INFO] Building jar: /build/reproducible-path/snpsift-5.2.e+dfsg/target/snpsift-5.2-javadoc.jar
[INFO]
[INFO] ------------------------< org.snpsift:snpsift >-------------------------
[INFO] Building SnpSift 5.2
[INFO] from pom.xml
[INFO] --------------------------------[ jar ]---------------------------------
[INFO]
[INFO] >>> javadoc:3.10.1:aggregate (default-cli) > compile @ snpsift >>>
[INFO]
[INFO] --- resources:3.3.1:resources (default-resources) @ snpsift ---
[INFO] skip non existing resourceDirectory /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/resources
[INFO]
[INFO] --- compiler:3.13.0:compile (default-compile) @ snpsift ---
[INFO] Nothing to compile - all classes are up to date.
[WARNING] Overwriting artifact's file from /build/reproducible-path/snpsift-5.2.e+dfsg/target/snpsift-5.2.jar to /build/reproducible-path/snpsift-5.2.e+dfsg/target/classes
[INFO]
[INFO] <<< javadoc:3.10.1:aggregate (default-cli) < compile @ snpsift <<<
[INFO]
[INFO]
[INFO] --- javadoc:3.10.1:aggregate (default-cli) @ snpsift ---
[INFO] Adding the --ignore-source-errors option
[INFO] Configuration changed, re-generating javadoc.
[WARNING] Javadoc Warnings
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/annotate/mem/dataFrame/dataFrameColumn/DataFrameColumnString.java:34: warning: @param argument "dataSize" is not a parameter name.
[WARNING] * @param dataSize: Total size of all strings (i.e. memory used)
[WARNING] ^
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/lang/expression/FieldIterator.java:31: warning: @param argument "starType" is not a parameter name.
[WARNING] * @param starType
[WARNING] ^
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/lang/expression/FieldIterator.java:32: warning: @param argument "max" is not a parameter name.
[WARNING] * @param max
[WARNING] ^
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/lang/expression/FieldIterator.java:138: warning: @param argument "starType" is not a parameter name.
[WARNING] * @param starType
[WARNING] ^
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/gwasCatalog/GwasCatalog.java:38: warning: invalid input: '&'
[WARNING] * Get all entries at a given chromosome & position
[WARNING] ^
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/gwasCatalog/GwasCatalog.java:38: warning: invalid input: '&'
[WARNING] * Get all entries at a given chromosome & position
[WARNING] ^
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/lang/LangFactory.java:99: warning: invalid input: '&'
[WARNING] * Create an AST from a program (using ANTLR lexer & parser)
[WARNING] ^
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/lang/LangFactory.java:99: warning: invalid input: '&'
[WARNING] * Create an AST from a program (using ANTLR lexer & parser)
[WARNING] ^
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/pedigree/PedigreeDraw.java:552: warning: @return tag cannot be used in method with void return type.
[WARNING] public void line(Individual parent1, Individual parent2, Individual child) {
[WARNING] ^
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/pedigree/PedigreeDraw.java:612: warning: @param argument "xpos" is not a parameter name.
[WARNING] * @param xpos
[WARNING] ^
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/pedigree/PedigreeDraw.java:626: warning: @param argument "xpos" is not a parameter name.
[WARNING] * @param xpos
[WARNING] ^
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/SnpSiftCmdAnnotate.java:403: warning: invalid input: '&'
[WARNING] * @param createList : If true, return a list with all annotated entries (used for test cases & debugging)
[WARNING] ^
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/SnpSiftCmdAnnotateMem.java:290: warning: invalid input: '&'
[WARNING] * @param createList : If true, return a list with all annotated entries (used for test cases & debugging)
[WARNING] ^
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/SnpSiftCmdFilter.java:32: warning: invalid input: '<'
[WARNING] * - Int, double fields: FiledZZ == N, FiledZZ < X, FiledZZ > X, FiledZZ <= X, FiledZZ >= X
[WARNING] ^
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/SnpSiftCmdFilter.java:32: warning: invalid input: '<'
[WARNING] * - Int, double fields: FiledZZ == N, FiledZZ < X, FiledZZ > X, FiledZZ <= X, FiledZZ >= X
[WARNING] ^
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/SnpSiftCmdFilterGt.java:25: warning: invalid input: '<'
[WARNING] * e.g. if the expression is "GQ < 20", all genotypes
[WARNING] ^
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/SnpSiftCmdIntervals.java:101: warning: @param argument "fileName" is not a parameter name.
[WARNING] * @param fileName
[WARNING] ^
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/SnpSiftCmdIntervalsIndex.java:55: warning: @param argument "bedFileNames" is not a parameter name.
[WARNING] * @param bedFileNames
[WARNING] ^
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/SnpSiftCmdIntervalsIndex.java:127: warning: @param argument "fileName" is not a parameter name.
[WARNING] * @param fileName
[WARNING] ^
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/SnpSiftCmdPedShow.java:106: warning: @param argument "tfamFile" is not a parameter name.
[WARNING] * @param tfamFile
[WARNING] ^
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/SnpSiftCmdPedShow.java:107: warning: @param argument "vcfFileName" is not a parameter name.
[WARNING] * @param vcfFileName
[WARNING] ^
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/SnpSiftCmdPedShow.java:108: warning: @param argument "outputDir" is not a parameter name.
[WARNING] * @param outputDir
[WARNING] ^
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/SnpSiftCmdPedShow.java:109: warning: @param argument "chrPos" is not a parameter name.
[WARNING] * @param chrPos
[WARNING] ^
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/SnpSiftCmdSort.java:16: warning: invalid input: '&'
[WARNING] * Sort VCF file/s by chromosome & position
[WARNING] ^
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/SnpSiftCmdVcf2Tped.java:179: warning: @param argument "tpedFile" is not a parameter name.
[WARNING] * @param tpedFile
[WARNING] ^
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/annotate/mem/arrays/StringArrayBase.java:32: warning: @param argument "numElements" is not a parameter name.
[WARNING] * @param numElements : Number of elements in the array
[WARNING] ^
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/annotate/mem/database/VariantDatabase.java:230: warning: @param argument "databaseVcfFileName" is not a parameter name.
[WARNING] * @param databaseVcfFileName
[WARNING] ^
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/hwe/VcfHwe.java:12: warning: invalid input: '&'
[WARNING] * "Principles of population genetics", Hartl & Clark
[WARNING] ^
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/hwe/VcfHwe.java:96: warning: invalid input: '&'
[WARNING] * "Principles of population genetics", Hartl & Clark, page 58 (formula 2.5)
[WARNING] ^
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/hwe/VcfHwe.java:187: warning: invalid input: '&'
[WARNING] * "Principles of population genetics", Hartl & Clark, page 58 (formula 2.5)
[WARNING] ^
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/hwe/VcfHwe.java:96: warning: invalid input: '&'
[WARNING] * "Principles of population genetics", Hartl & Clark, page 58 (formula 2.5)
[WARNING] ^
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/hwe/VcfHwe.java:131: warning: invalid input: '&'
[WARNING] * References: "Principles of population genetics", Hartl & Clark, page 58
[WARNING] ^
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/hwe/VcfHwe.java:187: warning: invalid input: '&'
[WARNING] * "Principles of population genetics", Hartl & Clark, page 58 (formula 2.5)
[WARNING] ^
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/VcfLd.java:12: warning: invalid input: '&'
[WARNING] * Reference: "Principles of population genetics (4th edition)" Hartl & Clark, pages 73 to 81
[WARNING] ^
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/SnpSiftCmdSort.java:16: warning: invalid input: '&'
[WARNING] * Sort VCF file/s by chromosome & position
[WARNING] ^
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/VcfLd.java:12: warning: invalid input: '&'
[WARNING] * Reference: "Principles of population genetics (4th edition)" Hartl & Clark, pages 73 to 81
[WARNING] ^
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/SnpSiftCmdSort.java:16: warning: invalid input: '&'
[WARNING] * Sort VCF file/s by chromosome & position
[WARNING] ^
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/lang/LangFactory.java:99: warning: invalid input: '&'
[WARNING] * Create an AST from a program (using ANTLR lexer & parser)
[WARNING] ^
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/gwasCatalog/GwasCatalog.java:38: warning: invalid input: '&'
[WARNING] * Get all entries at a given chromosome & position
[WARNING] ^
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/SnpSiftCmdSort.java:16: warning: invalid input: '&'
[WARNING] * Sort VCF file/s by chromosome & position
[WARNING] ^
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/VcfLd.java:12: warning: invalid input: '&'
[WARNING] * Reference: "Principles of population genetics (4th edition)" Hartl & Clark, pages 73 to 81
[WARNING] ^
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/lang/LangFactory.java:99: warning: invalid input: '&'
[WARNING] * Create an AST from a program (using ANTLR lexer & parser)
[WARNING] ^
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/gwasCatalog/GwasCatalog.java:38: warning: invalid input: '&'
[WARNING] * Get all entries at a given chromosome & position
[WARNING] ^
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/hwe/VcfHwe.java:96: warning: invalid input: '&'
[WARNING] * "Principles of population genetics", Hartl & Clark, page 58 (formula 2.5)
[WARNING] ^
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/hwe/VcfHwe.java:187: warning: invalid input: '&'
[WARNING] * "Principles of population genetics", Hartl & Clark, page 58 (formula 2.5)
[WARNING] ^
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/SnpSiftCmdSort.java:16: warning: invalid input: '&'
[WARNING] * Sort VCF file/s by chromosome & position
[WARNING] ^
[WARNING] /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/java/org/snpsift/VcfLd.java:12: warning: invalid input: '&'
[WARNING] * Reference: "Principles of population genetics (4th edition)" Hartl & Clark, pages 73 to 81
[WARNING] ^
[WARNING] 47 warnings
[INFO] ------------------------------------------------------------------------
[INFO] BUILD SUCCESS
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 01:03 min
[INFO] Finished at: 2026-03-26T19:18:54-12:00
[INFO] ------------------------------------------------------------------------
debian/rules execute_before_dh_auto_test
make[1]: Entering directory '/build/reproducible-path/snpsift-5.2.e+dfsg'
# Saving some files that are modified during the tests, in order to restore them later.
cp test/ann/gnomad_db_multiple_entries.vcf.sidx test/ann/gnomad_db_multiple_entries.vcf.sidx.old
cp test/gt_test.01.gt.vcf test/gt_test.01.gt.vcf.old
make[1]: Leaving directory '/build/reproducible-path/snpsift-5.2.e+dfsg'
dh_auto_test
/usr/lib/jvm/default-java/bin/java -noverify -cp /usr/share/maven/boot/plexus-classworlds-2.x.jar -Dmaven.home=/usr/share/maven -Dmaven.multiModuleProjectDirectory=/build/reproducible-path/snpsift-5.2.e\+dfsg -Dclassworlds.conf=/etc/maven/m2-debian.conf org.codehaus.plexus.classworlds.launcher.Launcher -s/etc/maven/settings-debian.xml -Ddebian.dir=/build/reproducible-path/snpsift-5.2.e\+dfsg/debian -Dmaven.repo.local=/build/reproducible-path/snpsift-5.2.e\+dfsg/debian/maven-repo --batch-mode test
OpenJDK 64-Bit Server VM warning: Options -Xverify:none and -noverify were deprecated in JDK 13 and will likely be removed in a future release.
[INFO] Scanning for projects...
[INFO]
[INFO] ------------------------< org.snpsift:snpsift >-------------------------
[INFO] Building SnpSift 5.2
[INFO] from pom.xml
[INFO] --------------------------------[ jar ]---------------------------------
[WARNING] The artifact org.apache.maven.plugins:maven-surefire-plugin:jar:2.17 has been relocated to org.apache.maven.plugins:maven-surefire-plugin:jar:2.22.3
[WARNING] The POM for org.biojava:biojava-structure:jar:6.x is invalid, transitive dependencies (if any) will not be available: 1 problem was encountered while building the effective model
[FATAL] Non-parseable POM /build/reproducible-path/snpsift-5.2.e+dfsg/debian/maven-repo/org/biojava/biojava-structure/6.x/biojava-structure-6.x.pom: start tag unexpected character $ (position: TEXT seen ...org.jgrapht.jgrapht-core.originalVersion>\n\t\t\n\t\t\t<debian.org.rcsb.$... @117:22) @ line 117, column 22
[INFO]
[INFO] --- resources:3.3.1:resources (default-resources) @ snpsift ---
[INFO] skip non existing resourceDirectory /build/reproducible-path/snpsift-5.2.e+dfsg/src/main/resources
[INFO]
[INFO] --- compiler:3.13.0:compile (default-compile) @ snpsift ---
[INFO] Nothing to compile - all classes are up to date.
[INFO]
[INFO] --- resources:3.3.1:testResources (default-testResources) @ snpsift ---
[INFO] skip non existing resourceDirectory /build/reproducible-path/snpsift-5.2.e+dfsg/src/test/resources
[INFO]
[INFO] --- compiler:3.13.0:testCompile (default-testCompile) @ snpsift ---
[INFO] Nothing to compile - all classes are up to date.
[INFO]
[INFO] --- surefire:2.22.3:test (default-test) @ snpsift ---
[INFO]
[INFO] -------------------------------------------------------
[INFO] T E S T S
[INFO] -------------------------------------------------------
[INFO] Running org.snpsift.tests.unit.TestCasesAnnotateTabix
TestCasesAnnotate.test_31_annotate_minimal_representation_db(642): Test
TestCasesAnnotate.test_29_repeated_IDs(618): Test
TestCasesAnnotate.test_01(145): Test
TestCasesAnnotate.test_02(153): Test
TestCasesAnnotate.test_03(161): Test
TestCasesAnnotate.test_04(169): Test
TestCasesAnnotate.test_05(181): Test
TestCasesAnnotate.test_06(192): Test
TestCasesAnnotate.test_07(217): Test
TestCasesAnnotate.test_08(232): Test
TestCasesAnnotate.test_09(245): Test
TestCasesAnnotate.test_11(273): Test
TestCasesAnnotate.test_12(300): Test
TestCasesAnnotate.test_13(320): Test
TestCasesAnnotate.test_14(340): Test
TestCasesAnnotate.test_15(356): Test
TestCasesAnnotate.test_16(372): Test
TestCasesAnnotate.test_17(390): Test
TestCasesAnnotate.test_18(415): Test
TestCasesAnnotate.test_19(428): Test
TestCasesAnnotate.test_20(439): Test
TestCasesAnnotate.test_21(453): Test
TestCasesAnnotate.test_22(479): Test
TestCasesAnnotate.test_24(509): Test
TestCasesAnnotate.test_25(539): Test
TestCasesAnnotate.test_35(693): Test
TestCasesAnnotate.test_36(711): Test
TestCasesAnnotate.test_38(732): Test
TestCasesAnnotate.test_39(743): Test
TestCasesAnnotate.test_40(762): Test
TestCasesAnnotate.test_41(770): Test
TestCasesAnnotate.test_42(781): Test
TestCasesAnnotate.test_43(809): Test
TestCasesAnnotate.test_44(835): Test
TestCasesAnnotate.test_45(861): Test
TestCasesAnnotate.test_33_empty_db(665): Test
TestCasesAnnotate.test_26_repeat_db_entry(568): Test
TestCasesAnnotate.test_32_annotate_minimal_representation_input(654): Test
TestCasesAnnotate.test_28_exists(596): Test
TestCasesAnnotate.test_34_dbStartsOnDifferentChromo(676): Test
TestCasesAnnotate.test_23_allele_specific_annotation_missing_R(491): Test
TestCasesAnnotate.test_27_repeat_db_entry(580): Test
[INFO] Tests run: 42, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 61.59 s - in org.snpsift.tests.unit.TestCasesAnnotateTabix
[INFO] Running org.snpsift.tests.unit.TestCasesEnumArray
EnumArray: length: 17 / 17, number of enums: 6
0: 'one' (1)
1: 'two' (2)
2: 'three' (3)
3: 'four' (4)
4: 'five' (5)
5: 'three' (3)
6: 'four' (4)
7: 'five' (5)
8: 'three' (3)
9: 'four' (4)
[INFO] Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 1.503 s - in org.snpsift.tests.unit.TestCasesEnumArray
[INFO] Running org.snpsift.tests.unit.TestCasesIntervals
TestCasesIntervals.test_01(25): Test
TestCasesIntervals.test_02(50): Test
[INFO] Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.056 s - in org.snpsift.tests.unit.TestCasesIntervals
[INFO] Running org.snpsift.tests.unit.TestCasesFilterChrPos
[INFO] Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.114 s - in org.snpsift.tests.unit.TestCasesFilterChrPos
[INFO] Running org.snpsift.tests.unit.TestCasesAnnotateUseIndex
TestCasesAnnotate.test_31_annotate_minimal_representation_db(642): Test
TestCasesAnnotate.test_29_repeated_IDs(618): Test
TestCasesAnnotate.test_01(145): Test
TestCasesAnnotate.test_02(153): Test
TestCasesAnnotate.test_03(161): Test
TestCasesAnnotate.test_04(169): Test
TestCasesAnnotate.test_05(181): Test
TestCasesAnnotate.test_06(192): Test
TestCasesAnnotate.test_07(217): Test
TestCasesAnnotate.test_08(232): Test
TestCasesAnnotate.test_09(245): Test
TestCasesAnnotate.test_11(273): Test
TestCasesAnnotate.test_12(300): Test
TestCasesAnnotate.test_13(320): Test
TestCasesAnnotate.test_14(340): Test
TestCasesAnnotate.test_15(356): Test
TestCasesAnnotate.test_16(372): Test
TestCasesAnnotate.test_17(390): Test
TestCasesAnnotate.test_18(415): Test
TestCasesAnnotate.test_19(428): Test
TestCasesAnnotate.test_20(439): Test
TestCasesAnnotate.test_21(453): Test
TestCasesAnnotate.test_22(479): Test
TestCasesAnnotate.test_24(509): Test
TestCasesAnnotate.test_25(539): Test
TestCasesAnnotate.test_35(693): Test
TestCasesAnnotate.test_36(711): Test
TestCasesAnnotate.test_38(732): Test
TestCasesAnnotate.test_39(743): Test
TestCasesAnnotate.test_40(762): Test
TestCasesAnnotate.test_41(770): Test
TestCasesAnnotate.test_42(781): Test
TestCasesAnnotate.test_43(809): Test
TestCasesAnnotate.test_44(835): Test
TestCasesAnnotate.test_45(861): Test
TestCasesAnnotate.test_33_empty_db(665): Test
TestCasesAnnotate.test_26_repeat_db_entry(568): Test
TestCasesAnnotate.test_32_annotate_minimal_representation_input(654): Test
TestCasesAnnotate.test_28_exists(596): Test
TestCasesAnnotate.test_34_dbStartsOnDifferentChromo(676): Test
TestCasesAnnotate.test_23_allele_specific_annotation_missing_R(491): Test
TestCasesAnnotate.test_27_repeat_db_entry(580): Test
[INFO] Tests run: 42, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 58.268 s - in org.snpsift.tests.unit.TestCasesAnnotateUseIndex
[INFO] Running org.snpsift.tests.unit.TestCasesAnnotateMem
TestCasesAnnotate.test_31_annotate_minimal_representation_db(642): Test
TestCasesAnnotate.test_29_repeated_IDs(618): Test
TestCasesAnnotate.test_01(145): Test
TestCasesAnnotate.test_02(153): Test
TestCasesAnnotate.test_03(161): Test
TestCasesAnnotate.test_04(169): Test
TestCasesAnnotate.test_05(181): Test
TestCasesAnnotate.test_06(192): Test
TestCasesAnnotate.test_07(217): Test
TestCasesAnnotate.test_08(232): Test
TestCasesAnnotate.test_09(245): Test
TestCasesAnnotate.test_11(273): Test
TestCasesAnnotate.test_12(300): Test
TestCasesAnnotate.test_13(320): Test
TestCasesAnnotate.test_14(340): Test
TestCasesAnnotate.test_15(356): Test
TestCasesAnnotate.test_16(372): Test
TestCasesAnnotate.test_17(390): Test
TestCasesAnnotate.test_18(415): Test
TestCasesAnnotate.test_19(428): Test
TestCasesAnnotate.test_20(439): Test
TestCasesAnnotate.test_21(453): Test
TestCasesAnnotate.test_22(479): Test
TestCasesAnnotate.test_24(509): Test
TestCasesAnnotate.test_25(539): Test
TestCasesAnnotate.test_35(693): Test
TestCasesAnnotate.test_36(711): Test
TestCasesAnnotate.test_38(732): Test
TestCasesAnnotate.test_39(743): Test
TestCasesAnnotate.test_40(762): Test
TestCasesAnnotate.test_41(770): Test
TestCasesAnnotate.test_42(781): Test
TestCasesAnnotate.test_43(809): Test
TestCasesAnnotate.test_44(835): Test
TestCasesAnnotate.test_45(861): Test
TestCasesAnnotate.test_33_empty_db(665): Test
TestCasesAnnotate.test_26_repeat_db_entry(568): Test
TestCasesAnnotate.test_32_annotate_minimal_representation_input(654): Test
TestCasesAnnotate.test_28_exists(596): Test
TestCasesAnnotate.test_34_dbStartsOnDifferentChromo(676): Test
TestCasesAnnotate.test_23_allele_specific_annotation_missing_R(491): Test
TestCasesAnnotate.test_27_repeat_db_entry(580): Test
[INFO] Tests run: 42, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 69.899 s - in org.snpsift.tests.unit.TestCasesAnnotateMem
[INFO] Running org.snpsift.tests.unit.TestCasesFilterGt
TestCasesFilterGt.test_01(28): Test
TestCasesFilterGt.test_02(62): Test
[INFO] Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.196 s - in org.snpsift.tests.unit.TestCasesFilterGt
[INFO] Running org.snpsift.tests.unit.TestCasesConcordance
TestCasesConcordance.test_01(68): Test
TestCasesConcordance.test_02(74): Test
TestCasesConcordance.test_03(80): Test
TestCasesConcordance.test_04(91): Test
TestCasesConcordance.test_05(102): Test
TestCasesConcordance.test_06(113): Test
TestCasesConcordance.test_07(125): Test
TestCasesConcordance.test_08(131): Test
TestCasesConcordance.test_09(142): Test
TestCasesConcordance.test_10(153): Test
TestCasesConcordance.test_11(164): Test
TestCasesConcordance.test_12(181): Test
[INFO] Tests run: 12, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.326 s - in org.snpsift.tests.unit.TestCasesConcordance
[INFO] Running org.snpsift.tests.unit.TestCasesVariantTypeCounter
[INFO] Tests run: 5, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.026 s - in org.snpsift.tests.unit.TestCasesVariantTypeCounter
[INFO] Running org.snpsift.tests.unit.TestCasesAnnotateCreateIndex
TestCasesAnnotate.test_31_annotate_minimal_representation_db(642): Test
TestCasesAnnotate.test_29_repeated_IDs(618): Test
TestCasesAnnotate.test_01(145): Test
TestCasesAnnotate.test_02(153): Test
TestCasesAnnotate.test_03(161): Test
TestCasesAnnotate.test_04(169): Test
TestCasesAnnotate.test_05(181): Test
TestCasesAnnotate.test_06(192): Test
TestCasesAnnotate.test_07(217): Test
TestCasesAnnotate.test_08(232): Test
TestCasesAnnotate.test_09(245): Test
TestCasesAnnotate.test_11(273): Test
TestCasesAnnotate.test_12(300): Test
TestCasesAnnotate.test_13(320): Test
TestCasesAnnotate.test_14(340): Test
TestCasesAnnotate.test_15(356): Test
TestCasesAnnotate.test_16(372): Test
TestCasesAnnotate.test_17(390): Test
TestCasesAnnotate.test_18(415): Test
TestCasesAnnotate.test_19(428): Test
TestCasesAnnotate.test_20(439): Test
TestCasesAnnotate.test_21(453): Test
TestCasesAnnotate.test_22(479): Test
TestCasesAnnotate.test_24(509): Test
TestCasesAnnotate.test_25(539): Test
TestCasesAnnotate.test_35(693): Test
TestCasesAnnotate.test_36(711): Test
TestCasesAnnotate.test_38(732): Test
TestCasesAnnotate.test_39(743): Test
TestCasesAnnotate.test_40(762): Test
TestCasesAnnotate.test_41(770): Test
TestCasesAnnotate.test_42(781): Test
TestCasesAnnotate.test_43(809): Test
TestCasesAnnotate.test_44(835): Test
TestCasesAnnotate.test_45(861): Test
TestCasesAnnotate.test_33_empty_db(665): Test
TestCasesAnnotate.test_26_repeat_db_entry(568): Test
TestCasesAnnotate.test_32_annotate_minimal_representation_input(654): Test
TestCasesAnnotate.test_28_exists(596): Test
TestCasesAnnotate.test_34_dbStartsOnDifferentChromo(676): Test
TestCasesAnnotate.test_23_allele_specific_annotation_missing_R(491): Test
TestCasesAnnotate.test_27_repeat_db_entry(580): Test
[INFO] Tests run: 42, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 62.367 s - in org.snpsift.tests.unit.TestCasesAnnotateCreateIndex
[INFO] Running org.snpsift.tests.unit.TestCasesStringArray
[INFO] Tests run: 6, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 63.724 s - in org.snpsift.tests.unit.TestCasesStringArray
[INFO] Running org.snpsift.tests.unit.TestCasesCaseControl
TestCasesCaseControl.test_01(53): Test
TestCasesCaseControl.test_02(65): Test
TestCasesCaseControl.test_03(83): Test
TestCasesCaseControl.test_04(107): Test
TestCasesCaseControl.test_05(119): Test
TestCasesCaseControl.test_06(125): Test
TestCasesCaseControl.test_07(131): Test
TestCasesCaseControl.test_08(137): Test
TestCasesCaseControl.test_09(146): Test
TestCasesCaseControl.test_10(222): Test
TestCasesCaseControl.test_02_Str2(77): Test
TestCasesCaseControl.test_03_Str2(95): Test
TestCasesCaseControl.test_03_Str3(101): Test
TestCasesCaseControl.test_01_Str(59): Test
TestCasesCaseControl.test_02_Str(71): Test
TestCasesCaseControl.test_03_Str(89): Test
TestCasesCaseControl.test_04_Str(113): Test
[INFO] Tests run: 17, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.913 s - in org.snpsift.tests.unit.TestCasesCaseControl
[INFO] Running org.snpsift.tests.unit.TestCasesDataFrameColumnBool
[INFO] Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 3.068 s - in org.snpsift.tests.unit.TestCasesDataFrameColumnBool
[INFO] Running org.snpsift.tests.unit.TestCasesIndex
TestCasesIndex.test_01(32): Test
TestCasesIndex.test_02(84): Test
[INFO] Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 4.14 s - in org.snpsift.tests.unit.TestCasesIndex
[INFO] Running org.snpsift.tests.unit.TestCasesPrivate
TestCasesPrivate.test_01(48): Test
TestCasesPrivate.test_02(59): Test
TestCasesPrivate.test_03(70): Test
TestCasesPrivate.test_04(81): Test
TestCasesPrivate.test_05(89): Test
TestCasesPrivate.test_06(95): Test
TestCasesPrivate.test_07(101): Test
TestCasesPrivate.test_08(107): Test
[INFO] Tests run: 8, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.042 s - in org.snpsift.tests.unit.TestCasesPrivate
[INFO] Running org.snpsift.tests.unit.TestCasesSplit
TestCasesSplit.test_01(28): Test
TestCasesSplit.test_02(58): Test
TestCasesSplit.test_03(84): Test
[INFO] Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.03 s - in org.snpsift.tests.unit.TestCasesSplit
[INFO] Running org.snpsift.tests.unit.TestCasesVarType
TestCasesVarType.test_05_multiple(82): Test
TestCasesVarType.test_01_SNP(58): Test
TestCasesVarType.test_02_MNP(64): Test
TestCasesVarType.test_03_INS(70): Test
TestCasesVarType.test_04_DEL(76): Test
[INFO] Tests run: 5, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.033 s - in org.snpsift.tests.unit.TestCasesVarType
[INFO] Running org.snpsift.tests.unit.TestCasesDataFrameSnp
DataFrame: SNP_A, size: 100, current index: 100, memory: 63.4 KB
Field types:
##INFO=<ID=field_char,Number=0,Type=Character,Description="">
##INFO=<ID=REF,Number=0,Type=String,Description="">
##INFO=<ID=field_int,Number=0,Type=Integer,Description="">
##INFO=<ID=field_bool,Number=0,Type=Flag,Description="">
##INFO=<ID=field_string_2,Number=0,Type=String,Description="">
##INFO=<ID=ALT,Number=0,Type=String,Description="">
##INFO=<ID=field_float,Number=0,Type=Float,Description="">
##INFO=<ID=field_string,Number=0,Type=String,Description="">
0 130 | G | A | null | null | null | true | EHPBPZOQGQUUVRTPOVSQENPLWOJYBWQKVGUIHFQWUSYUOXQ | null | 0.7077105889551186 | LZORARZVMGTYMKSHHVGLPKFFVDPCDVBXJSQCOQZPXBTJGJYGUPJFGVNNNHQUDVOYXEBBPQ |
1 757 | C | A | T | null | -1414941450 | true | JHSDKMELBXLUSSYJWTCQVIFLIJUELKBKEYJKNTHRFDXBCCKBLVOSVEUQFWT | null | null | GLETAEGILYUTDVAIFEOZYGHKARCZKVIZSFEDWAATTXBGTQUYDTQDGOYRSCIDNLNPVZTXTZUNERDJENKLHKXYEMFMQTLZADZBNDX |
2 1370 | C | A | null | null | 1897090011 | true | CUBOPMIUMFYLGRXNUESRZQDSAYJBJPSXKJQEUTDCSYARPMLCBJQVLWOVIJFGCPTTGMGCXHAYYLXAIMKCT | null | 0.4232016820908536 | UVPLGVIJEDMQLNYMXTSWVOERCTXUKSWFGOET |
3 1477 | C | A | V | null | 1879654250 | false | YPNKJELMEJCCCBAXESFLUYOJPARNUOSXOMPBKSLLDJGZKGHDVQLAAKWGAUODCZNFMRXEWAMVAFWWRYGGOTPRSHRUNJEPJI | null | 0.16081777232382255 | null |
4 2041 | G | A | null | null | 238651298 | false | RFTUUMHFZGRNHENWGVSRDGKVKARTBDCKYMOCEFUBDVXECTMHEVVOZPUTFMAKDPSHTHAR | null | 0.9203780707537543 | ZJPBVKGYBSVUHJBXPLIAMKDDPV |
5 2233 | T | A | G | null | 1415419657 | false | XRXWJUZTUYIHWWHCPJPBKFZBMNESHHXQXSIOOTQBYAMZRFKJC | null | 0.5608777204835643 | ODCKIZGLHJCVWJPDTEPZKMCQAQPJUIKUDWOJEACFAGHAJUAGU |
6 2424 | T | A | B | null | 1038841321 | true | AOLSBMGEKFBIGQUKJLUZTUDNVRJBQVPCOIEJRXLFNYGZGASEUGGPSBVAVQAISGEPOGDMTZPNIWMONLAETYPXX | null | 0.23329031270168166 | BJTOPXYAVBUFKFXCYZJXGYVICKOAMFVVWSPTNCGQIEMXRMHTEIGRNSQ |
7 2436 | C | A | Z | null | 1534332943 | true | FGZVEUUGMRBHYLGVDHQHETXOLCKQWDSOOPYFTKEUSOFRMKCHTCDASCZBWYYWFGVFTKARFUSEWVKGOKVC | null | 0.9064250162187653 | VCOMBUUTBXWQKICCOGOWJJGUZZCQWQYUQQTKMUBBNRIJOSKIGWEOJWYMVUDHDFKUXNMTUYJPZYRU |
8 3195 | T | A | X | null | 82125448 | true | QIYBBUBAZLCDFWYENCGBPHXSRWAOUSCYHUHUBGDWQETIVGKEMLV | null | 0.5895111591883899 | LZVCADPXDFSLLACZQMHEWEYJWJWQVRQKHZFHKBJCCBTEBDJKRNQUULWPMBXFIJAJIWKOWUCMTSW |
9 3795 | G | A | B | null | -1863371068 | false | ADIWAXPTXTV | null | 0.8353647488012405 | KQQHTZFSFVYKAZIZWLITSIBGVBUMVBJWDLZISLBBZZLAFIY |
10 4211 | T | A | H | null | 1146535185 | true | ICZG | null | 0.45790653980526064 | YTNWGKENKRJLZXOPKYMRYUQSVPFUZGDDMXLOBWQRTANIBWUKCXIEUXXTAZJWFGWAAEQHSMCZYQXQMRPTPFNAEJFNLPAVTXNBS |
11 4593 | T | A | S | null | -2067478043 | true | XPOHDKZTCWJEGQOFABQPIKEPQYVZJDJKZSAFIAAHSWFGVIBKKGFWKBYZYNSNTPANSIGHYIAITLYHHFQBG | null | 0.3213170275175463 | RDMJIBLOBLSKDWFONVIKA |
12 5155 | C | A | E | null | -1582508959 | null | WTMUTOOPMQNUGIHZTBJTLIFFBHNWHXBLGYGCTRNXIWGFMDRYLLIS | null | 0.996499903115384 | null |
13 5957 | T | A | W | null | 418863761 | true | QPCY | null | 0.6214323026875882 | TIMJZ |
14 6475 | C | A | E | null | -1694109453 | false | IURYCMIRNPAQXDXXUOXPYASMSHLSH | null | 0.5008657916784399 | EYWHCEBYNFJGRCAUIVMXQXRDXKNXIQFMHOCPKFQIYOKFUCMTYDAXAWLEPFSOPHVFZUEFDEJNVD |
15 7374 | T | A | P | null | 1676673925 | true | VSGRPTSDYQCNFNNIKYQTFEOEHQDCMXXGNLSSWJIIPEMJKSOVNOHLLTOINNESNDAMNPABXDMDFINZH | null | 0.9396996031685798 | LUPRBRXWHBLPLKJKWNFXJFPCSFTBCOGQQMIQABGWIONUOBWHKOXRNGJGVRXGVGFTVBPELFIVQAXUJQEJUMISRBUU |
16 7558 | C | A | V | null | -1932890842 | true | null | null | 0.5705108314931444 | ITFREYQHUQLXZIVVZTNGEXPPRGWIJFGNMKTZUOIZVXNXQZFDEBETGNMT |
17 8121 | C | A | W | null | 1554269779 | false | OWKBQYRYSGVHXBWNYGWXWVNWBBASTFMWIMPLAKWIQLCYASAYTWLRZ | null | null | CF |
18 8617 | G | A | A | null | -1236886794 | false | EKKLYORBIPYRJUDBIDCVFQZTUNWCGVSDIDIZXMDDAKTUAODSJAAKKPEEFFMCGPCRPYIKDMFUPNFRTNVPWIOXYXTHTYNY | null | null | ACOJSAMYSFHFDOWTMCRLMYTTAVQCBRJRCXBFMMMEUYDPQEFKJEZLOHQRTHZUBYWZORERPCZFUS |
19 8942 | G | A | J | null | 1689625755 | false | CAQQYHVYMSZDYZLGDMWLBJJADJNZBAVOB | null | 0.9615764869110734 | TVATSQRUUCAKFROSNQESIETCBYNCQKJDXWIHQVGONRRSGZRYORCGVCJXSQSUFGVPCCKOEMOWWQXOBMRHBACQREDB |
20 9766 | G | A | Z | null | -1592120268 | null | BSUFQUKPWLPNFFRJWMCUWIXPNTHHZZHADJSGVZPTFTXFBASLXSEJEJNCMXPXKEAEIXRRTZWOVCTBZXSFZEKHHLXZ | null | 0.9695903512350196 | XMYLARYBPGPAPLSOYBUKFPB |
21 9894 | T | A | B | null | -276880478 | false | LYAFTMUPXGOVUIDXQKLPRETYPTCCKIUXDNSLHWUDRUSZUWXBVOUOUYTQUNPJDEXQEXRAAQDWLX | null | 0.3186475059556044 | ACLYINUQMDKFXDIMSWQOFOJHETRGRNTRCEOBDTQWXBHOJWCYZUUUVSTMV |
22 9940 | G | A | B | null | 1968656375 | true | QAKHPQEWWNHVSQLOT | null | 0.23199904965999452 | FGVOADMYOHSRXWUDPVRSRMKLUCGTCFRDYIDIJF |
23 10454 | G | A | T | null | 235139563 | true | null | null | 0.40670084666628736 | JSJYH |
24 10697 | G | A | W | null | -1874689267 | true | PJFRKXQOSMDDYBVPNIPFGNGFXOYMCPAZFZCSMNEYJGTFPZIVULMYLCDHDSTUTUSRRDMJNIGBCJUBZXLDNNXPCVBJPSNJTE | null | 0.2720104762251929 | ATDXNUGEPQVNYFYDKVSQXWTECOSPWSYPWHFHTNZLHHCQDWURHCUCFMYMTWLAEORAA |
25 11364 | T | A | W | null | null | false | null | null | 0.38313554979059905 | OKNAZOGGLAHUDGHSLYCNLRITIOBZJSTXAOFYSGHZWIFOJXYYHZGVIWJFFVQXUOBTPVATCWTSSEDAGAQRDSPMURZGG |
26 11482 | G | A | G | null | 957533267 | false | XCFPBUDSQGLOBMZVVFLNSWMQXUCJTEKJBHRBKIFJPG | null | 0.3840613085884651 | CYGTPEMXGDGHWYUWKWRPOEUAAVSFEFMTYWHFBGMHHFEMY |
27 11619 | G | A | A | null | 1070093697 | false | GXUEAFPGVRPBB | null | 0.7823969714233068 | MMVQSQTSRSIRDVTNMTRXPBHFNJSKHXWIQWUUWZXQFUVXVAIJYKTFJOCXPZVUPWVJCUHEB |
28 12475 | C | A | Z | null | null | false | VQJ | null | 0.6542177803813974 | QWJECWFMMF |
29 12567 | C | A | Y | null | -1041889437 | false | EBZYNSDERCMAIXBNIQRIEMDHOQFQNJQUXLEAMIGIACWWMBNSJUJALKXXPVHUIRPUEIYKIREKZGFGBEAADUU | null | 0.8341152351901386 | HXAJOITFCVMOPIMPXRLKAIEIOUMPNXSABCPGVH |
30 13559 | G | A | null | null | -784355308 | false | KRIHEMLGVFOGEXQAHOSMXAJGLFIOEWERSVVSAJWPPTKAZQRFFFVRYSYVBDJNEDJSAMHXJDPHXFJ | null | 0.8919018013118993 | VSJEYOUPPNBVRPSISCUDRTBUEEBJFHEBUIHMNHWIMEDVXAMQMWWROUP |
31 13979 | C | A | G | null | 604597538 | false | HXO | null | 0.5737767537412954 | MXGLYBFIHLNCHAUOTOBMXB |
32 14208 | T | A | Z | null | 889094607 | false | KCJCRPRWZMRUHRDHRWTPNJDWQYQEYTRZGFJYAWMGVKTNMFTZSOSWWVMRPXNYNX | null | 0.7348688792213431 | COYIRUODLHHZGLMBQAJLGCZOUMEVVTADJIMOLIXKBVOTCBFCXQXRORIHAGVGOEUXJCGASKRFLVSUERWOAEHZWLSQJATLMHBLMPH |
33 14411 | C | A | P | null | -1277757986 | true | KYUETNMSZMQMOXJFESSUVIOIQBGIVNRJOMZVWXWMONEKKHMGZCBTCVGNNODWGLUYIKDTOP | null | 0.8142863771145411 | M |
34 14916 | T | A | Q | null | -2031558444 | false | XZIMBNHOHFIONKJDLERDGTFZPBBLHWZQAMTRPVRWFEGXRZRFDZRKFJOMCLPTTEKBFTTAFFZUAIURYMGGUWLAUKSTJQ | null | 0.043487543382889626 | null |
35 15412 | G | A | I | null | -1766739712 | false | QHTUUHBYSKXKDGWDDGQCUCQXBOMEYSHEELIYNVOKDHIX | null | 0.5545954825682613 | DGCQOGRHZTCYBZORDEBIMVHWPTPDSDL |
36 15844 | T | A | D | null | -974905979 | false | XJKYOLRXTHOYVQIXLQNZ | null | 0.8376967825567874 | XNRJBTUVDIAXJXSRAABIXFMQFNGHXLSOEAJKVRSXRELHZXDYXGCQDQQEE |
37 16151 | C | A | Y | null | -1464052388 | false | COISHZBCOERGUMYYDMVTOZFRCDZWFXPYAZDFJJHTKRYJFYFQLAKZUSSPYAPSWBQETRQQLRESQTQPMYWUY | null | 0.08138900458380194 | ZXXEALXRGCNLDFIXNZUPCZBSDODUKCOUTKXIRBMYCWNUDNNGDBTLFEYVTQKTOGH |
38 17114 | G | A | Y | null | -2072713690 | true | | null | 0.7540337043607578 | ZMSNEIIVXNKHDIKCPEZAYOPAVIWWDSBKGVIERZVVKWQMAPZOPDSXSKNPUUTRASSVAQLBASZKUOAQX |
39 17643 | C | A | E | null | 197650789 | null | CZJYFXCWGKYBDKQCOPZCRZCATNTUFFAAFWFFSVSBSJYSHLOFXYBMYZTQ | null | 0.5932150852090792 | QOQTKLVFPHTXHKJQVYAMKHLOWPTSYXUYRRGGGIIANNDJRSSXCAJCOPYYTHKUHL |
40 18248 | T | A | V | null | 1669796498 | true | null | null | 0.7987358741089746 | BUBAJUXSDHKHHCKPS |
41 18687 | C | A | X | null | -293144311 | false | VENLFRCLOJVRJUUTROOOTNOWPKPFZRWZGJGDREVYFYKPCKEHLAWCLGIHAGDZCLUGEUPAZPLXVMDCCMGQOMKTOVGLRH | null | 0.10242576624359911 | SGJPTSJDTKELPQHQDIEBEXBHJFIMPPDVZXFSSIZV |
42 19586 | G | A | Y | null | 1528438884 | true | FGCAHRXFUYRWJHGVJZCGXHLBHRLBCINDKYLGDKTYCLAZVICTNRXSDTKJBNDZXHKWLUOGGPCVERAXXOAVLQKIFLWJJTKVI | null | 0.48247255963260227 | RQOOBAXHWOPEORODIVFVMHWOXPGIWSRGLUGVEHLXDQTT |
43 19835 | G | A | V | null | 1658077281 | false | MQOLJLYKIUWLLNINAU | null | 0.9483279906075137 | OLTDOBNXUKJDPVJPSOBEOLCFOWQUAECVTRUGBQXLOOINVKQYHMPAUEYV |
44 20336 | T | A | L | null | -1086732515 | false | HYKIPFDMLTTAXEEGFQ | null | 0.9280433347351722 | JCLAUMVGKGUNPFZ |
45 20494 | G | A | L | null | 1407551342 | true | THBQXHRKWBEPZCHIAWMAKDQYRBPZBSVDVUVMAOYDMVWKCQOPWFYZOOPPWEJLJA | null | 0.12120423601455688 | STLWRADKLNSWYQIJLEMSYPRLUMZYSMRUPTOFHVRVJGCXKJZJDJCTJBMSKNTNRRWSWPOQJY |
46 20559 | G | A | B | null | -1956401995 | false | ZYMGNTENXHJSBPO | null | 0.2366115296468535 | JHOASYFSNYLHTKKYEXOXXCVQFFNCFTY |
47 21158 | C | A | Y | null | 1061170105 | true | TNMCPYCWDFLSHSINSSHZSFLFTPMDXIFUGVSFLODMYZHILGJSYHWBHI | null | 0.9582050005562486 | SHHTGIFDDJOXULGGPJTGVPOEXCNXBDIORIOEWPXUPJBBEKPQSARFFXUWDNIYWXADIYLUONT |
48 21839 | G | A | V | null | -1448080652 | false | NNWGPVDMZCMWALBHBZSDNPAZQNUZCBTVECALPBVRYGCTNGWNEHDQFNZRIJLEGPLJGZKGBBUEWZXQRUFHYOHQSASWDVQTYZFJUUC | null | 0.15721187608078857 | null |
49 22652 | C | A | null | null | 1798018762 | false | VRU | null | 0.1829273084105637 | QOYVQPTTMGBOOHSFOWUIJURGROVHDGOLLVMWBULFCGKDFFUUTDDXURSPK |
50 22922 | G | A | U | null | -1397098024 | true | GZKFCTREWKRHVHNGEOUBUIDIWXCNWIISITBTVMNPAYTHIPNCKCARBOCHEUDXOHXBODYUAKYGAHTLQELXYTJNNNPXLEGI | null | 0.7042135516116015 | PZLVEDGKFHPAFTMIKDCKW |
51 23093 | G | A | U | null | 24180645 | true | RSBDIILLCGQGDPFJVTKNEZBOQHXUGGG | null | 0.1684584264549135 | KNBBOPMKWBRCLYRXXABQJIXFRTNVCQIBZZQJAARJSGJOTHKAVFTWIUOIHRTVRUYFUACKZHXRLNAKXKBXLTNWDOSJT |
52 23709 | T | A | T | null | 1236657593 | false | null | null | 0.24280966163477757 | CSVBKGRQSNGDQGTNSIEYGJHV |
53 24620 | T | A | S | null | -1894693114 | true | PUATVBRLNYHIUPECZERSOMBIFLO | null | 0.6929618041184821 | CYDEEBKTFLFFLUFTSGJBQGY |
54 25394 | C | A | V | null | 1493543084 | true | null | null | 0.9018279295021804 | XFHZBLHXADISRKTIKXYMHTGDHUFIIDBYCTEUXSGVRGHDPVVEJASWCQDXMS |
55 26392 | T | A | R | null | 93450229 | true | QTAWTAOUNAYMHGNEWNYWEDDDCHLHPAMMBTCCYEASQAPHIVZCCVYKLUQ | null | 0.005711057299588651 | null |
56 27288 | C | A | G | null | -293064464 | false | QDTZPZQRZIACBFBDNFDLHOOWLPEKVRDEKAKMMIVCNFXLMUOOKIRSCDIVMKWMUBVINKPGRFPAXZAQCY | null | 0.747238647577231 | UZISTJZGJCDRPCNJCMTEKILBJSYNPCHNBHOVKEEOIDGCIPPPILVEHYJBDBLQWQTZGEERZXKCHCR |
57 27949 | T | A | null | null | 1968806855 | true | null | null | 0.4900712025998173 | JSQBAQBCZIHQFIGJUIQDVGBKHIBZWKGGQCSTRTLHEEGLMSAWQTGULKMUEBFERFVNVUBWFASDAKTYBUSRKBLDDWEOF |
58 28706 | C | A | X | null | null | true | PEVNUIRNSROCBCLTAXWNYPFVQNKFDAHZSZPMHFLCLYQVZEKQBOLPHTQDLSFTTMPM | null | 0.5837865399404514 | DJDCOBKBBYHBFZDGHGIFVIDZLRXCLXTZSXTKYSTMBQGGRLEXDSRBZJGXWOWHUPIIIRKVSTHEUQCNVKQSNISLICNKDKOMRLK |
59 29025 | T | A | Q | null | 1592215662 | true | null | null | 0.1867690496466592 | GADLZGNPSYEUDVAJRCRBBKCGZALLRDVNCSQBWFUIKAVQQ |
60 29783 | G | A | R | null | 1808188087 | false | AJHIZFPZJVLKFQHDWSTGPETVKXCXKWHSIMDNCPPXMPDZVJUAGJEZKKCJCLUBGMVFISLNJICNTQK | null | 0.284821207181992 | LKAWOOVRGFJQKVJRPQASSROBWVZDJKOCRCYMTXUBTDHUANHSZRCNCFBCWIZCNXGDEIMCPBZSBYHGCJJCH |
61 29885 | C | A | D | null | 2099808094 | true | BZVLBZNPJBGGWENLYYCJTPADCDDQOGHM | null | null | null |
62 30363 | C | A | F | null | 2049461907 | true | YDBVMBDDWTLH | null | 0.19308796469213663 | UXNYIRQCUBYGFSIMFYUAOECXQBGSKUSCEPQAOEVABQVGYCHUOTAEUPCXSMJBZN |
63 30664 | C | A | R | null | 1268480895 | null | FMWTOZMHCMXPFIOFRZAWQCTHQNXHDVMXZWXANQSZMAQJJKHDMASERCYWAWEEYUQ | null | 0.7337084268772609 | PNIWYMDJFTUBBMZZFWQYCCSALZJMOLGKLDXZXVZZI |
64 30865 | T | A | S | null | -378279969 | true | CYAOLFVXWCCSCLZTPSWEZOISZGQEGOAGLBNEVBDRXIXKVQHAMWTPLWPNHKVQVL | null | 0.17906540472431376 | BFWBJNIIFDYZWDSDUABTFOWDJHCNWEFLHQSSDKFHQVLDLEYB |
65 30965 | C | A | J | null | 471210071 | false | CTJXHBDBIDKXPHFOTFRATSTVGMMNADVITTBCUBYQEBQREDVKQVRWCEFSWRGIDIFQAFZGNEUXCUGFHDUYGCNDAMPRDVDPCCT | null | 3.3798591568623415E-4 | AHKHSJBEALCXXDQOQGKMWQYUNAVYXZLMSHZQOQAOMXYIBMPQHOMYJBNEODMVE |
66 31810 | C | A | D | null | -856376734 | null | TFNBOQDFQOSGIMGDVIDDYSIARMFNRXIDQWTWJFLQPICWLAKPW | null | 0.28175891452276325 | DZFIQAKSFLJFVUGJEAODATZBRRLBEQPWOKOXKFCDSZTVBKMHRHBLGOAIHY |
67 32236 | G | A | E | null | 1603058295 | true | ELWGCHTRZWHGPSJQDOVVDARUZRDFCROZGNNKLYMOPBGVKKEECTYFDRMGCEZ | null | 0.06608935143869987 | VHWTPPXLDCEUJVNDMTNWIVWAUWXGGLUXIOZZRBJJIUCGRJFDBUXNZCRQNAITMRTBYIC |
68 32279 | C | A | U | null | null | false | CQVYZEBMKVBMFPHNELKLQQTKDBYWMMMLOMWDKEYBUTFMOPXQHBHWYXRNQZTIPAXUATFOMJWEUBBMYDPULQZMZEDELHUCD | null | 0.8661449413480625 | IHADOF |
69 32608 | T | A | R | null | 885653722 | false | CEUAJYIQKIXRLLYWEHVGXFPHAAUD | null | 0.9988775237005663 | XXUODKYHXTZMYUWDVLMXUWUJVJQOFOLKCFROKHUCXYBSBMVOQAJLIVJLLIVKIMHNAJEWWRVWIZSGQPVZGJVDJ |
70 33008 | G | A | J | null | 945969148 | false | QBBTBRGBKZFMCM | null | 0.32096214117959965 | KHVYQCQKXUPYHKVOPSCJYNGPAHAHNQKARYGFZFXQHIJKMWIEK |
71 33459 | T | A | Z | null | -1727043276 | true | null | null | 0.6692453147361582 | BKTOJGDTUTFKJQGNEXEKZSZQ |
72 34070 | T | A | W | null | -522264751 | false | CZBQOPQ | null | 0.3706339971103657 | MFLNYIAJYPS |
73 34080 | G | A | Q | null | -1031944423 | true | BUUEXHGUEQLVFIECDHCJEXBPZTNNUGGNQRCFGCLCZL | null | 0.8044321661564519 | UHOZCYODCFABSKEDDMQDIIPGHVZBDSZEWNRWSUYVVSOYHJJNHKMNUL |
74 34998 | C | A | X | null | -748117835 | true | EKTMBUOBZBKLTJMSURAYRXBCQMBFCCJLLATENBRRGHPSMAIZCPBATXXVHGDQXVTUTLCCUOEWSCGDKYTEGYYTNJQBYHCWLKK | null | 0.8214445816892618 | RBGGEOPFRVIOUHAVSYGXMMWZEJTKLGQIGRWFRRQPOKVFNLUBIYFBAUNPDVY |
75 35245 | G | A | E | null | 1713093473 | false | KRZJLAUPUQUKFCWVILOIQRMKLWKVIMPSQGQQNCWUOOODFX | null | null | VETGLEKPBVHLRZZCIVSXZRKBEOERVKNQMYPBSU |
76 35544 | C | A | M | null | null | true | SIBGCAUOFFYVS | null | 0.8641128569289488 | ZPNNKYYWJASSEOOTVOMHEQALCBNSOIUBJHULZAQBBRFRJGAZJF |
77 35671 | C | A | P | null | null | false | CADYZZKOKNDIJQWVENOKRPELATYNBXBIXFNZNJOPDWFPVEGBDMNZ | null | 0.3987435782174066 | XFUMVUZPPYMJWXLTJFYYYLFMIRHTQKHVRPKBIKEQEHHEFPDIISRJLHXN |
78 36561 | T | A | D | null | -1460529165 | true | XWBHGEOLXJAFLXULPZGOHHPVYKONTTVCOQNLCWSMQUCHQQLSVPYLUIDGCGAOOIWYYNIQHONRKHLCUIXZZIYXHYQTEPKZLFFD | null | 0.6853806738425013 | JMJVZNNVTYOGCLPAAEWFHXXHZSKILOGWYTQN |
79 37461 | G | A | Q | null | -370738731 | false | JTNZIUKYPRCYFYRJTIMZCUTWALOTKNBHTORFBZWSPFYBDENAEMVIQZBDVRTNVQWSKUSZKIYRSHCZHDRLFULNBVZYMWMCWSNATKM | null | 0.6877880916304786 | null |
80 37688 | T | A | M | null | null | false | AOWMOMIAHSXGQAOJVNMALPLDEWAFVWFQMSSRMHZWJVVUOMBPVLGTNWXGFKDELXIPNUBI | null | 0.11235770546609591 | XVTNOEXWQQVTGTYHRYIKSBPMDLKYANUQQSBHHFNJMSBKHRYXQMXNCHRFX |
81 37872 | C | A | P | null | 918728225 | true | TCTJJQZLBEIWXLIDELTXVWYOGYCNFDSSXEVDGHUMRBMPSIPOELOIZALCSFUBICUYVGZRUC | null | 0.22246030326656885 | DQDPRHSPDBXOVSQDYPTSBOHIXPFDYCFBWFIJOYSGWEIOFGIUX |
82 38240 | C | A | D | null | 799276516 | true | VXZZYKIRENGVZILQ | null | 0.9266466937796255 | NDEAFXIIBLWZYUZUWYXQZREBEHXQZJGMJQZLJFYKYFBXNSVJTLWNHBEUMPEFUCIPJJNTHMLQTYJURKMRXYHDULOETRHFDJ |
83 39087 | C | A | S | null | -24941154 | false | DPSXOBUVDYUVXJVCQC | null | 0.7331699812800507 | YFDZCXTCGTGQRTIAPDDYSLBHDYOEYFHHKORYXGSGMUZOCDLFZWPTVNSBZCISAQEHRFONPWQ |
84 39848 | C | A | U | null | -1693220490 | false | TPSRJHDKBDZEZWMWLJVVMMXUVVGHNVOZYPQRDQXSFUDEHXTGNQQDVBKIEZBVIVOYKQVRQYCMJAMIHT | null | 0.13371271442356658 | null |
85 40311 | T | A | Q | null | 1393421383 | false | PJLNBCCVLDOBFFIBXIWYNWPONALNRDOUUIZOZANCFSHJFAUVMFOZYUDRXIVX | null | 0.6531233959776986 | null |
86 41221 | C | A | X | null | null | true | WXONPKQUQOCSOLGKFDASKPM | null | 0.6053836153414445 | HAHLUYTGFNUMWYCYFWSDUVNNDFUBOGYSZGEJGRUQMKXJIAKLYIUGICLVURGSXFJCAXCGZKZKGXU |
87 41864 | C | A | K | null | 468567806 | true | RORVMYYKPYAM | null | 0.11273881633613159 | IGEGGZUDIMTLCOYYXOYESTZVLXIYHFLBWVRPVPBOAIVXCWSQVTZKNXGQ |
88 42064 | T | A | C | null | null | true | TIHNQPTSFSEQDBHZBNESFTNMMBHTCZRTQJGILVEEPC | null | 0.331658923043161 | OGVKFINKYIWQEGYAKQZXEGXNLLREPZFWVCTQTHORMWUADUERWVVTEILAAAWWEQGIIUKQTGFVSEPVTJSEWOEWXDUV |
89 42509 | G | A | H | null | -1246328247 | false | PMRBMYNJMWKISSQSPVODXUFKNLGZUIAZNNDFNUFAVMYECUHCAZJBYCLWWKT | null | 0.15343423367903142 | FAOCDFSUNIOOVESGTIPFVKUARMUBGZXYUKKFAFXYZOHHJFVMANHSBRDCSOPTTCSZJSNBGPIFIBAH |
90 43153 | C | A | R | null | 807042979 | false | GTZFGXFMSSZQVMYCFSVUZWZMVVVAMVZAAQHDHBHFFAYFMRFBHJSXUNGJITKBVEEPVVKXCSIXIBPDCIIEIJGPIYRYOKKJGWQFGM | null | 0.9386411416386536 | null |
91 43380 | G | A | Y | null | -2089396397 | true | SGDLLYEDQGNLLGTKZUZKDQYKPUXKEQCQLI | null | 0.11007731621246053 | ESMQRCAXYFQXI |
92 44013 | G | A | O | null | 897370038 | true | ONOYSMVTAGLUXLTSFSUXWPAZCGDEZLOURIYYLWILVSASNXJPRPTZJUVXIXGKFSRYQHMBXLWGDWVBAGMPTPSDIRXOPHW | null | 0.5924396633188068 | QWBRYGDGRIKAMQVKJOHLFKMJVLVPEWSAPMKKJOCHYNCBMNZGHZDQIJCWDWAX |
93 44026 | C | A | L | null | 985953272 | true | MAZQXNOKCAAFLMKMAPJWDQJCYEVSBUBXDQEBUOZRNZMEYWN | null | 0.6715564052618268 | NACNSNCHTLNYRRGIOERSJAEXCVDZTHLXIASSVJIAGBAADWLG |
94 44993 | C | A | U | null | 660772828 | true | RWBWITTSCTVWERUBUYFRQAZEOOVZJFXKRBSP | null | 0.862677140873428 | LRLFXDZVCSKRHFAOHYQEROWKFMUZWTWVWVEASCDWYPBMUTRLSEYOQ |
95 45470 | C | A | V | null | -1024151526 | false | RKLHJC | null | 0.549969275294569 | TBUBYREHOBNQZAXRCSAFUCKBVTXSFZIREOPS |
96 45856 | T | A | Q | null | -1501848022 | true | null | null | 0.8681195274458912 | null |
97 46816 | G | A | X | null | null | true | QXMEWEAZFGHCIOHYERXDZFDWPGMMPWASXLFEMMHIIRGLTWABTAHOQZHIYVYWSNZYSVHEUPARPRXANOYECAOXWUWWVT | null | 0.13316878795796683 | CQYYNYRBIIEWXCXDOUIHQBODOZVZMZKNJIVKSVNASIVINPVYVOOFJZLLPJAFKPFDVHROQPHOPRLLGYJFDTJW |
98 47348 | T | A | D | null | -1744261515 | true | UWGNVSSQWFYCDFHHPEETPXZMKACPDAVPUPUFOKMOHRRYEWXXYNLPWODAVFQLYFWYGSXOQWBSZMNVAMWWRCT | null | 0.0747086820367786 | null |
99 47714 | C | A | A | null | -408548646 | true | JWMMJQHSKQBSLLSGOWIMIRRBIEZVEAOMGJVFRQZFIVYJCJCARHWGLTWGVOVBBSKLOOZKHCWJZYEZK | null | 0.5351096975610091 | NI |
DataFrame: SNP_C, size: 100, current index: 100, memory: 63.4 KB
Field types:
##INFO=<ID=field_char,Number=0,Type=Character,Description="">
##INFO=<ID=REF,Number=0,Type=String,Description="">
##INFO=<ID=field_int,Number=0,Type=Integer,Description="">
##INFO=<ID=field_bool,Number=0,Type=Flag,Description="">
##INFO=<ID=field_string_2,Number=0,Type=String,Description="">
##INFO=<ID=ALT,Number=0,Type=String,Description="">
##INFO=<ID=field_float,Number=0,Type=Float,Description="">
##INFO=<ID=field_string,Number=0,Type=String,Description="">
0 130 | A | C | null | null | 1325939940 | true | EHPBPZOQGQUUVRTPOVSQENPLWOJYBWQKVGUIHFQWUSYUOXQ | null | 0.7077105889551186 | LZORARZVMGTYMKSHHVGLPKFFVDPCDVBXJSQCOQZPXBTJGJYGUPJFGVNNNHQUDVOYXEBBPQ |
1 757 | A | C | L | null | 117313442 | false | AEGILYUTDVAIFEOZYGHKARCZKVIZSFEDWAATTXBGT | null | 0.4686717016077616 | |
2 1425 | T | C | S | null | -435642541 | false | LZADZBNDXVFRJHSDKMELB | null | 0.014055818452733182 | VZTXTZUNERDJENKLHKXYEMF |
3 1532 | T | C | V | null | -1468434616 | true | VOERCTXUKSWFGOETZUFCUBOPMIUMFYLGRXNUESRZQDSAYJBJPSXKJQEUTDCS | null | 0.69709331396258 | LKBKEYJKNTHRFDXBCCKBLVOSVEUQFWTNZKBFUZYSRXCKKTJLEUVPLGVIJEDMQLNYMX |
4 1626 | G | C | L | null | 76479700 | true | YYLXAIMKCTVQNSDPJFZMDVOZIAHTCCKYPNKJELMEJCCCBAXESFLUYOJPARNUOSXOMPBKSLLDJGZKGHDVQLAAKWGAUODCZN | null | 0.5472075167262199 | CPTTGMGC |
5 2037 | G | C | W | null | 497861789 | false | CKYMOCEFUBDVXECTMHEVVOZPUTFMAKDPSHTHARUGHBUTZYQGKGJWBPOXVOD | null | 0.6228544201629813 | PRSHRUNJEPJICSFDIBMCDIQEETUIGTSZJPBVKGYBSVUHJBXPLIAMKDDPVNZURFTUUMHFZGRNHENWGVSRDGKVKAR |
6 2057 | T | C | P | null | -1406811197 | true | AQPJUIKUDWOJEACFAGHAJUAGUXHJXRXWJUZTUYIHWWHCPJPBKFZBMNESHHXQXSIOOTQBYAMZRFKJCJOA | null | 0.48687173749553314 | null |
7 2860 | A | C | B | null | 1001974229 | false | AMFVVWSPTNCGQIEMXRMHTEIGRNSQPPZAOLSBMGEKFBIGQUKJLUZTUDNVRJBQ | null | 0.9430161143370018 | OPXYAVBUFKFXCYZJXGYVI |
8 3817 | A | C | N | null | 820742796 | true | TBXWQKICCOGOWJJGUZZCQW | null | 0.5926161499838429 | UGGPSBVAVQAISGEPOGDMTZPNIWMONLAETYPXXUWRHTWRBBIFZWSEEYMAVCOM |
9 4413 | A | C | N | null | 1119905417 | false | null | null | 0.7852648697879052 | GWEOJWYMVUDHDFKUXNMTUYJPZYRUZCWFGZVEUUGMRBHYLGVDHQHETXOL |
10 4813 | A | C | E | null | 1720339637 | true | PXD | null | 0.6088492750640411 | CHTCDASCZBWYYWFGVFTKARFUSEWVKGOKVCBJRCITOZLVPZQXPTCATSLLZV |
11 5524 | A | C | W | null | -1363857139 | false | SRWAOUSCYHUHUBGDWQETIVGKEMLVCLMYKFYMDAGCGBDIDZEEHKQ | null | 0.5340339813731204 | VRQKHZFHKBJCCBTEBDJKRNQUULWPMBXFIJAJIWKOWUCMTSWCUNQIYBBUBAZLCDFWYENCGB |
12 5648 | G | C | null | null | null | false | null | null | 0.7204961878614636 | TSIBGVBUMVBJWDLZISLBBZZLAFIYNIVADIWAXPTXTVODSUOZTPWRVHQMFXCK |
13 5917 | A | C | Z | null | 121572172 | null | NLPAVTXNBSMPGICZGSAAKUXYRDHISDKIKEXJRDMJIBLOBLSKDWFONVIKAEYDXPOHDKZTC | null | 0.7094489766507978 | MRYUQSVPFUZGDDMXLOBWQRTANIBWUKCXIEUXXTAZJWFGWAAEQHSMCZYQXQMRPTPFNA |
14 6459 | A | C | K | null | -1220586919 | false | FQBGATATIARJNANENEUPMRUWTMUTOOPMQNUGIHZTBJTLIFFBHNWHXBLGYGCTRNXIWGFMDRYLLISWKNUEIYXBMRV | null | 0.8919390102660923 | DJKZSAFIAAHSWFGVIBKKGFWKBYZYNSNTPANSIGHYIAITL |
15 6679 | A | C | J | null | 940454155 | false | MHOCPKFQIYOKFUCMTYD | null | 0.19631180378072444 | YGQYRZLRREBLEBHRQZRGEYWHCEBYNFJGRCAUIVMXQXRDXKNX |
16 7181 | T | C | H | null | 576887710 | false | XUBSELUPRBRXWHBLPLKJKWNFXJFPCSFTBCOGQQMIQABGWIONUOBWHKOXRNGJGVRXGVGFTV | null | 0.07720664912473318 | EJNVDJVDIURYCMIRNPAQXDXXUOXPYASMSHLSHBDGHYGPIRBDKXC |
17 8074 | T | C | J | null | -422146125 | false | WKXGXIITFREYQHUQLXZIVVZTNGEXPPRGWIJFGNMKTZUOIZVXNXQZFDEBETGNMTOBLZ | null | 0.39924721679807706 | RBUUMGFVSGRPTSDYQCNFNNIKYQTFEOEHQDCMXXGNLSSWJIIPEMJKSOVNOHLLTOINNESNDAMNPABXDMDFINZHSRJSFVGSMS |
18 8901 | T | C | U | null | 1006707364 | false | CBRJRCXBFMMMEUYDPQEFKJEZLOHQRTHZUBYWZORERPCZFU | null | 0.2724737555583038 | POWKBQYRYSGVHXBWNYGWXWVNWBBASTFMWIMPLAKWIQLCYASAYTWLRZOEZULNPISAMSOKHMUACOJSAMYSFHFDOWTMCRLMYTT |
19 9057 | G | C | null | null | null | false | BIDCVFQZTUNWCGVSDIDIZXMDDAKTUAODSJAAKKPEEFFMCGPCRPYIKDMFUPNFRTNVPWIOXYXTHTYNYBD | null | 0.5245560595402556 | null |
20 9759 | A | C | Q | null | -102713501 | true | DBOCPCAQQYHVYMSZDYZLGDMWLBJJADJNZBAVOBMTNXMJZA | null | 0.987999856038869 | ATSQRUUCAKFROSNQESIETCBYNCQKJDXWIHQVGONRRSGZRYORCGVCJXSQSUFGVPCCKOEMOWWQXOBMRHBAC |
21 10438 | A | C | X | null | 5277273 | true | XSEJEJNCMXPXKEAEIXRRTZWOVCTBZXSFZEKHHLXZIXJKJIXDPIKBKIANCKLACLYINUQMDKFXDIMSWQOFOJHETRGRNTRCEOBDTQW | null | null | PGPAPLSOYBUKFPBAFIBSUFQUKPWLPNFFRJWMCUWIXPNTHHZZHADJSGVZPTFTXFB |
22 10667 | T | C | V | null | 1204505736 | null | VUIDXQKLPR | null | 0.0747072190044199 | TOLYAFTMUP |
23 11041 | G | C | null | null | 39675779 | false | XQEXRAAQDWLXMONCLSJNJFGBQRLQGVCFGVOADMYOHSRXWUDP | null | 0.200656308174055 | DRUSZUWXBVOUOUYTQUNP |
24 11932 | A | C | C | null | 1447277076 | false | WHKXIGPLGGEVWJSEISSNATDXNUGEPQVNYFYDKVSQXWTECOSPWSYPWHFH | null | 0.038605111882175636 | JFXVPQAKHPQEWWNHVSQLOTMXOVRAGOTTXTCDDIXWJJSJ |
25 12491 | T | C | H | null | 988757342 | false | VULMYLCDHDSTUT | null | 0.7658555547661529 | TWLAEORAANJSPJFRKXQOSMDDYBVPNIPFGNGFXOYMCPAZFZCSMNEYJGTF |
26 12957 | T | C | C | null | -592135898 | false | PZLVRQWDHOYTRBOKNAZOGGLAHUDGHSLYCNLRITIOBZJSTXAOFYSGHZWIFOJXYYHZGVIWJFFVQXUOBTPVATCWTSSEDAGAQR | null | 0.39224060732371047 | NNXPCVBJPSNJTEH |
27 13152 | A | C | null | null | -1315294767 | false | QGLOBMZVVFLNSWMQXUCJTEKJBHRBKIFJPGHPQTYO | null | 0.12764604542692848 | KLLCGOGZFFHLCYGTPEMXGDGHWYUWKWRPOEUAAVSFEFMTYWHFBGMHHFEMYPISXCFPB |
28 14016 | T | C | Y | null | 397797617 | false | CWFMMFFDRVQJWARQPOLYAIVYZQ | null | 0.6606672661308439 | TSRSIRDVTNMTRXPBHFNJSKHXWIQWUUWZXQFUVXVAIJYKTFJOCXPZVUPWVJCUHEBBELGXUEAFPGVRPBBCUZUTIRNMBZQIBPCTGQ |
29 14342 | A | C | T | null | -1987493819 | false | LKXXPVHUIRPUEIYKIREKZGFGBEAADUUMWYHAEHMXFNGJXNTYDVSJEYOUPPNBVRPS | null | 0.5257024134636187 | MPXRLKAIEIOUMPNXSABCPGVHHLJEBZYNSDERCMAIXBNIQRIEMDHOQFQNJQUXLEAMIGIACWWMBNSJ |
30 15242 | A | C | B | null | 401189003 | true | null | null | 0.38830464061684267 | null |
31 16050 | T | C | M | null | -912434516 | true | FJUVINTKURUNTGXBCRIYGMXGLYBFIHLNCHAUOTOBMXBPTXHXONSYUZUFENSQQWZBPWG | null | 0.1980054990409249 | PEHPKRIHEMLGVFOGEXQAHOSMXAJGLFIOEWERSVVSAJWPPTKAZQRFFFVRYSYVBDJNEDJSAMHXJD |
32 16690 | T | C | H | null | 1517047320 | false | null | null | 0.8379316023844177 | AJLGCZOUMEVVTADJ |
33 16910 | T | C | F | null | -397603831 | true | AGVGOEUXJCGASKRFLVSUERWOA | null | 0.5704988038983347 | null |
34 17722 | A | C | H | null | 466219921 | true | OAMMXFPMGJWHVBMIISKYUETNMSZMQMOXJFESSUVIOIQBGIVNRJOMZVW | null | 0.10743163842113601 | KKCJCRPRWZMRUHRDHRWTPNJDWQYQEYTRZGFJYAWMGVKTNMFTZSOSWWVMRPXNYNXLQ |
35 18141 | G | C | T | null | -260961560 | false | null | null | 0.13847150405507225 | null |
36 18777 | A | C | Y | null | 1184228205 | false | QMNRSPVOKGXZIMBNHOHFIONKJDLERDGTFZPBBLHWZQAMTRPVRW | null | 0.7065858600517958 | null |
37 19768 | G | C | J | null | 1952582250 | null | KSTJQACGSGRAMCVDIGDQCKOTDGCQOGRHZTCYBZORDEBIMVHWPTPDSDLDEGQHTUUHBYSKXKDGWDDGQCUCQXBOMEYSHEELIYNV | null | 0.16341591642736342 | TTEKBFTTAFFZUAIURYMGGUW |
38 20090 | T | C | S | null | -329728495 | false | OYVQIXLQNZJEFFEIOQAEKWYKMIVESHZXXEALXRGCNLDFIXNZUPCZBSDODUKCOUTKXIRBMYC | null | 0.10317526862175708 | DSNJKSFBXNRJBTUVDIAXJXSRAABIXFMQFNGHXLSOEAJKVRSXRELHZXDYXGCQDQQEEPBAXJKYOLR |
39 20562 | G | C | F | null | 1804923979 | true | HZBCOERGUMYYDMVTOZFRCDZWFXPYAZDFJJHTKRYJFYFQ | null | 0.2195458587951088 | OGHTWJC |
40 21053 | G | C | B | null | -144337035 | false | NEIIVXNKHDIKCPEZAYOPAVIWWDSBKGVIERZVVKWQMAPZOPDSXSKNPUUTRASSVAQLBASZKUOAQXSZYHTFPESQNYFKQEPAPSQQOQ | null | 0.6307428626490887 | RESQTQPMYWUYTHQCHTPHGWMYYPIWPAH |
41 21806 | A | C | Q | null | -2088069898 | false | PTSYXUYRRGGGIIANNDJRSSXCAJCOPYYTHKUHLZDK | null | 0.6231257518601767 | null |
42 22058 | A | C | D | null | -345702397 | true | EFEAIUVTSPDSNVBUBAJUXSDHKHHCKPSLSDCLUOIJTCPZTXKZA | null | 0.35599371966149784 | RZCATNTUFFAAFWFFSVSBSJYSHLOFXYBMYZTQXJ |
43 23054 | G | C | T | null | 121063657 | false | null | null | 0.6568110946338338 | DIEBEXBHJFIMPP |
44 23245 | G | C | E | null | null | true | EUPAZPLXVMDCCMGQOMKTOVGLRHFHNQMBPQZMVYTJOPTTGRQOOBAXHWOPEORODI | null | 0.44806773421618973 | LOJVRJUUTROOOTNOWPKPFZRWZGJGDREVYFYKPCKEHLAWCLGIHAGDZC |
45 23280 | G | C | W | null | 578554250 | false | DKYLGDKTYCLAZVICTNRXSDTKJBNDZXHKWLUOGGPCVERAXXOAVLQKIFLWJ | null | 0.04624360636075597 | EHLXDQTTSIJFGCAHRXFUYRWJHGVJZCGXHLBHRLB |
46 23879 | A | C | B | null | -1095543088 | false | null | null | 0.38605120753190303 | ODKOLTDOBNXUKJDPVJPSOBEOLCFOWQUAEC |
47 24298 | G | C | V | null | -1476423743 | false | LTTAXEEGFQGXLBBHXRCJVLXRLFKYGSTLWRADKLNSWYQIJLEMSYPRLUMZYSMRUPTOFHVRVJGCXKJZJDJCTJBMSKNTNR | null | 0.11715762961725507 | UEYVOVQMQOLJLYKIUWLLNINAULGHKESUDFREILZDQYXXHJCLAUMVGKGUNPFZAZQHYKIP |
48 24903 | A | C | W | null | 390077302 | false | PZCHIAWMAKDQYRBPZBSVDVUVMAOYDMVWKCQOPWFYZOOP | null | 0.7984498050273369 | K |
49 25202 | G | C | Q | null | -836597398 | true | XBDIORIOEWPXUPJBBEKPQSARFFX | null | 0.5729985772223652 | RNQFDCVJHOASYFSNYLHTKKYEXOXXCVQFFNCFTYYJLZYMGNTENXHJSBPOTDAUKOTRZLNYAYGFBKVSHHTGIFDDJOXULGGPJTGVPOE |
50 26096 | T | C | Y | null | -956685735 | true | CWDFLSHSINSSHZSFLFTPMDXIFUGVSFLODMYZHILGJSYHWBHIFILQDC | null | 0.17880359829479353 | ETNM |
51 26449 | A | C | D | null | 466935695 | true | HDQFNZRIJLEGPLJGZKGBBUEWZX | null | 0.22059988335771297 | PVDMZCMWALBHBZSDNPAZQNUZCBTVECALPBVRYGCTNG |
52 27377 | A | C | S | null | 1416258910 | false | UTDDXURSPKSCNVRUEZJVGIUWTXHUDCOQYZFPZLVEDGKFHPAFTMIKDCKWPZQGZKFCTR | null | 0.8257088275299405 | FJUUCLNKWXYBNONXNRMRDSFQOYVQPTTMGBOOHSFOWUIJURGROVHDGOLLVMWBULFCGKD |
53 27405 | T | C | B | null | -1957676038 | true | GQTKNBBOPMKWBRCLYRXXABQJIXFRTNVCQIBZZQJAARJSGJOTHKAV | null | 0.2211636637864719 | NWIISITBTVMNPAYTHIPNCKCARBOCHEUDXOHXBODYUAKYGAHTLQELXYTJNNNPXLEGILTKJKBPLEWXUA |
54 27524 | T | C | V | null | null | true | RQSN | null | 0.05046136960776815 | KZHXRLNAKXKBXLTNWDOSJTUIFRSBDIILLCGQGDPFJVTKNEZBOQHXUGGGGXVAUPORVJZTOJMMUPECSV |
55 27762 | G | C | J | null | 337814814 | true | IFLOGISAKLNHGVIVMCRZGOEXFHZBLHXADISRKTIKX | null | 0.9415580589124032 | AKKXEYZYIMSZQHIQYVCYDEEBKTFLFFLUFTSGJBQGYPKJPUATVBRLNYHIUPECZERS |
56 28026 | A | C | D | null | 1256061260 | false | QIIWDFWFESSLYGJQVJSBTUZISTJZGJCDRPCNJCMTEKILBJ | null | 0.968496265784478 | SGVRGHDPVVEJASWCQDXMSCMKQSOUBBBVBJRYNYSLDLERQTAWTAOUNAYMHGNEWNYWEDDDCHLHPAMMBTCCYEASQAPHIVZCCVY |
57 28778 | T | C | V | null | null | true | ZIACBFBDNFDLHOOWLPEKVRDEKAKMMIVCNFXLMUOOKIRSCDIVMKWMUBVINKPGRFPAXZAQCYNCFHHGTIVJG | null | 0.7688990285080709 | CIPPPILVEHYJBDBLQWQTZGEERZXKCHCRVOGQDTZP |
58 29129 | T | C | null | null | 980721615 | true | ZWKGGQCSTRTLHEEGLMSAWQTGULKMUEBFERFVNVUBWFASDAKTYBUSRKBLDDWEO | null | 0.4622995304977632 | QFIGJUIQDVGBK |
59 29636 | A | C | D | null | 1390914368 | true | X | null | null | VJBHDJDCOBKBBYHBFZDGHGIFVID |
60 30474 | G | C | M | null | 1515055969 | true | FVQNKFDAHZSZPMHFLCLYQVZEKQB | null | 0.7409815665149543 | XDSRBZJGXWOWHUPIIIRKVSTHEUQCNVKQSNISLICNKDKOMRLKHNSPEVNUIRNSROCBCLTAXW |
61 30610 | A | C | F | null | 90735203 | false | LRDVNCSQBWFUIKAVQQY | null | null | SCZTRZLGJQQUKIIAPGADLZGNPSYEUDVAJRCRBBKCG |
62 31325 | T | C | T | null | 1852795286 | false | EIMCPBZSBYHGCJJCHZAJAJHIZFPZJVLKFQHDWSTGPETVKXCXKWHSIMDNCPPXMPDZVJUAGJEZK | null | 0.6132294578078568 | ZLKAWOOVRGFJQKVJRPQASSROBWVZDJKOCRCYMTXUBTDHUANHSZRCNCFBCWIZCN |
63 32141 | A | C | I | null | 513821018 | true | WENLYYCJTPADCDDQOGHMOVVSZJDCDAWFEBOBSMKUXNYIRQCUBYGFSIMFYUAOECXQBGSKUSCEPQAOEVABQVGYCHUOTAEUPCXSMJ | null | 0.013355374167080325 | TQKOCGCXSKCEDPKOLOTGKOBZVLBZNPJ |
64 32520 | G | C | B | null | -1621505252 | true | WCWVCQRXQVDNPNIWYMDJFTUBBMZZFWQYCCSALZJMOLGKLDX | null | 0.4998322634463337 | N |
65 32607 | G | C | null | null | -339319550 | false | XANQSZMAQJJKHDMASERCYWAWEEYUQTEZZDPNUQYPSLZEVRQGBF | null | 0.780453290420614 | MXPFIOFRZAWQCTHQNXHDVM |
66 33517 | A | C | D | null | -572022652 | false | null | null | 0.5988396823217189 | OWDJHCNWEFLHQSSDKFHQVLDLEYBCIQCYAOLFVXWCCSCLZTPSW |
67 33993 | T | C | N | null | -1738479899 | true | NHKVQVLIAPGDSPUGHRJ | null | 0.3625174745801645 | XKVQHAMWTP |
68 34102 | A | C | S | null | -1073982345 | false | RATSTVGMMNADVITTBCUBYQEBQREDVKQVRWCEFSWRGID | null | 0.4761978219475651 | XDQOQGKMWQYUNAVYXZLMSHZQOQAOMXYIBMPQHOMYJBNEODMVEEFBCTJXHBDBIDKXPHF |
69 34166 | T | C | C | null | -222656654 | true | TFNBOQDFQOSGIMGDVIDDYSIARMFNRXIDQWTWJFLQPICWLAKPW | null | 0.43136002553398134 | GCNDAMPRDVDPCCTNNBCPCXUCJIDAGHNODZFIQAKSFLJFVUGJEAODATZBRRLBEQPWOKOXKFCDSZTVBKMHRHBLGOAIHY |
70 34592 | G | C | E | null | 1603058295 | true | ELWGCHTRZWHGPSJQDOVVDARUZRDFCROZGNNKLYMOPBGVKKEECTYFDRMGCEZ | null | 0.06608935143869987 | VHWTPPXLDCEUJVNDMTNWIVWAUWXGGLUXIOZZRBJJIUCGRJFDBUXNZCRQNAITMRTBYIC |
71 34635 | A | C | F | null | 855592486 | false | YZEBMKVBMFPHNEL | null | 0.48250355081481844 | ADOFZLP |
72 34895 | G | C | M | null | -725609102 | true | PULQZMZEDELHUCDBTWQJJVJXWLRQHRDMENXXUODKYHXTZMYUWDVLMXUWUJVJQOFOLKCFROKHUCXYBSBMVOQ | null | 0.762356385268207 | EYBUTFMOPXQHBHWYXRNQZTIPAXUATFOMJWEUBB |
73 35605 | G | C | I | null | -1080358974 | false | AHNQKARYGFZFXQHIJKMWIEKPDQQBBTBRGBKZFMCMBEVLOGA | null | 0.07293217555193243 | WRVWIZSGQPVZGJVDJEEACEUAJYIQKIXRLLYWEHVGXFPHAAUDGWKSKVEWCKVJHOOKWRVKHVYQCQKXUPYHKVOPSCJYNG |
74 36576 | G | C | null | null | -302854964 | false | TUTFKJQGNEXEKZSZQSANBMVAXRABRZWJEAEABTMFLNYIAJYPS | null | 0.9604138454200374 | null |
75 37125 | G | C | M | null | null | true | DSZEWNRWSUYVVSOYHJJNHKMNULYYCBUUEXHGUEQLVFIECDHCJEXBPZTNNUGGNQRCFGCLCZLYWEJMYHNTTSXXCLCCPJRBGGEOPFR | null | 0.9511758825939518 | WDOSQMSWTUMIUHOZCYODCFABSKEDDMQDIIPGH |
76 37510 | A | C | M | null | -954131549 | false | AIZCPBATXXVHGDQXVTUTLCCUOEWSCGDKYTEGYYTNJQBYHCWLKKNLPUGLUZPEPQWRMM | null | 0.8239415352361015 | LGQIGRWFRRQPOKVFNLUBIYFBAUNPDVYDOXEKTMBUOBZBKLTJMSURAYRXBCQMBFCCJLLATENBRRGH |
77 37548 | G | C | null | null | -604825087 | null | RKBEOERVKNQMYPBSUHNQKRZJLAUPUQUKFCWVILOIQRMKLWKVI | null | 0.5775280612131627 | CIV |
78 38242 | G | C | U | null | null | false | DCUY | null | 0.9168626208902441 | XMMRLQOTVYZPCMTXLUFJUZPNNKYYWJASSEOOTVOMHEQALCBNSOIUBJHULZAQBBRFRJGAZJFYSHSIBGCAUOFFYVSTFHZXHGROHWP |
79 38813 | G | C | J | null | -1060008357 | true | EQEHHEFPDIISRJLHXNORWCADYZZKOKNDIJQWVENOKRPELATY | null | 0.5636726805530461 | YYLFMIRHTQKHVRPK |
80 39804 | A | C | O | null | -41179819 | false | VYKONTTVCOQNLCWSMQUCHQQLSVPYLUIDG | null | 0.5772578841976616 | GBDMNZOFIEPCPEANBDLHYXXFKJMJVZNNVTYOGCLPAAEWFHXXHZSKILOGWYTQNLEWXWBHGEOLXJAFLXULPZGO |
81 40642 | G | C | null | null | -205879304 | false | ZIYXHYQTEPKZLFFDEOMBEYHZSGIQQETOE | null | 0.9696367861264819 | LCU |
82 41264 | A | C | K | null | 894088999 | false | TIMZCUTWALOTKNBHTORFBZWSPFYBDENAEMVIQZBDVRTNVQWSKUSZKIYRSHCZHDRLFULNBVZYMWMCWSNATKMXIBTID | null | 0.03688145467878867 | null |
83 41596 | T | C | P | null | -975534012 | false | TGTYHRYIKSBPMDLKYANUQQS | null | 0.7928325890103091 | W |
84 42029 | G | C | R | null | 310253242 | true | Z | null | 0.8539197522117524 | HRFXSPGAOWMOMIAHSXGQAOJVNMALPLDEWAFVWFQMSS |
85 42943 | A | C | T | null | 607159257 | false | PNUBIQSXJJIMPZRAQRPGGYYEALDQDPRHSPDBXOVSQDYPTSBOHIXPFDYCFBWFIJOYSGWE | null | 0.3788040778412717 | E |
86 43781 | G | C | C | null | -968348607 | true | EBEHXQZJGMJQZLJFYKYFBXNSVJTLWNHBEUMPEFUCIPJJNTHMLQTYJURKMRXYHDULOETRHFDJW | null | 0.5141137514398851 | EIWXLIDELTXVWYOGYCNFDSSXEVDGHUMRBMPSIPOELOIZALCSFUBICUYVGZRUCWQPBGBNWRLKDJYERMIINDEAFXIIBLWZYUZUWYX |
87 44096 | G | C | N | null | 1877670182 | true | KORYXGSGMUZOCDLFZWPTVNSBZCISAQEHRFONPWQQXCDPSXOBUVDYUVXJVCQCBJLYOLUVOCIFUEZZG | null | 0.0825834081697362 | XAGJUNMNBZSMODRXZBYFDZCXTCGTGQRTIAPDDYSLBHDYOEY |
88 44862 | G | C | D | null | 292978956 | null | IHTRDJLBERTXDYQZAPBEVZQOPJLNBCCVLDOBFFIBXIWYNWPONALNRDOUUIZOZANCFSHJFAUVMFOZYUDRXIVXGA | null | 0.7571768837926776 | ZWMWLJVVMMXUVVGHNVOZYPQRDQXSFUDEHXTGNQQDVBKIEZBVIVOYKQVRQYCM |
89 44995 | T | C | H | null | -1246496945 | true | EJGRUQMKXJIAKLYIUGICLVURGSXFJCAX | null | 0.9583422799198349 | UYTGFNUMWYCYFWSDUVNNDFUBOGY |
90 45159 | T | C | F | null | -144000269 | false | FDASKPMDBASJYUSZRTKHCHMKEYIGEGGZUDIMTLCOYYXOYESTZVLXIYHFLBWVRPVPBOAIVXCWSQVTZKNXGQLGWRORVMYY | null | 0.8822155345441609 | UQOCSO |
91 46091 | G | C | C | null | -1053492588 | true | FVSEPVTJSEWOEWXDUVMQMTIHNQPTSFSEQDBH | null | null | OEWAOGVKFINKYIWQEGYAKQZXEGXNLLREPZFWVCTQTHORMWUADUERWVVTEILAAAWWEQGIIUK |
92 46592 | A | C | H | null | 175016072 | true | null | null | 0.8899784086868494 | GILVEEPCHTEGAXQHZZKHNCPGXUCFAOCDF |
93 47573 | G | C | F | null | -167495906 | false | CAZJBYCLWWKTSGVRHGNDOZBRLYNCQJNXKGTZFGXFMSSZQVMYC | null | 0.47299236005182366 | BGZXYUKKFAFXYZOHHJFVMANHSBRDCSOPTTCSZJSNBGPIFIBAHZYTPMRBMYNJMWKISSQSPVODXUFKNLGZUIAZNNDFNUFAVMYE |
94 47734 | G | C | V | null | -1734529840 | false | SGDLLYEDQGNLLGTKZUZKDQYKPUXKEQCQLI | null | null | HDHBHFFAYFMRFBHJSXUNGJITKBVEEPVVKXCSIXIBPDCIIEIJGPIYRYOKKJGWQFGMJFLHZAHXAQFYBZVVKGXESMQRCAXYFQXI |
95 48367 | G | C | O | null | 897370038 | true | ONOYSMVTAGLUXLTSFSUXWPAZCGDEZLOURIYYLWILVSASNXJPRPTZJUVXIXGKFSRYQHMBXLWGDWVBAGMPTPSDIRXOPHW | null | 0.5924396633188068 | QWBRYGDGRIKAMQVKJOHLFKMJVLVPEWSAPMKKJOCHYNCBMNZGHZDQIJCWDWAX |
96 48380 | T | C | F | null | -819807059 | true | GGNHMAZQXNOKCAAFLMKMAPJWDQJCYEVSBUBXDQEBUOZRNZMEYWNTPMJUZMH | null | 0.46904482548623505 | ACNSNCHTLNYRRGIOERSJAEXCVDZTHLXIASSVJIAGBAA |
97 49324 | T | C | L | null | -114418910 | false | null | null | 0.34282113100252154 | CSKRHFAOHYQEROWKFMU |
98 49535 | T | C | Y | null | 482703874 | true | B | null | 0.2767290379215618 | SEYOQUBORWBWITTSCTVWERUBUYFRQAZEOOVZJFXKRBSPXSRJHJMNUZVVGBGRN |
99 50401 | T | C | Z | null | 774077734 | false | CMKHHRQKKZSZXYRELEZOLEJKZFBXWMPOBPUCQ | null | null | UCKBVTXSFZIREOPSNYURKLHJCGP |
DataFrame: SNP_G, size: 100, current index: 100, memory: 63.4 KB
Field types:
##INFO=<ID=field_char,Number=0,Type=Character,Description="">
##INFO=<ID=REF,Number=0,Type=String,Description="">
##INFO=<ID=field_int,Number=0,Type=Integer,Description="">
##INFO=<ID=field_bool,Number=0,Type=Flag,Description="">
##INFO=<ID=field_string_2,Number=0,Type=String,Description="">
##INFO=<ID=ALT,Number=0,Type=String,Description="">
##INFO=<ID=field_float,Number=0,Type=Float,Description="">
##INFO=<ID=field_string,Number=0,Type=String,Description="">
0 130 | A | G | null | null | 1325939940 | true | EHPBPZOQGQUUVRTPOVSQENPLWOJYBWQKVGUIHFQWUSYUOXQ | null | 0.7077105889551186 | LZORARZVMGTYMKSHHVGLPKFFVDPCDVBXJSQCOQZPXBTJGJYGUPJFGVNNNHQUDVOYXEBBPQ |
1 757 | A | G | L | null | 117313442 | false | AEGILYUTDVAIFEOZYGHKARCZKVIZSFEDWAATTXBGT | null | 0.4686717016077616 | |
2 1425 | T | G | S | null | -435642541 | false | LZADZBNDXVFRJHSDKMELB | null | 0.014055818452733182 | VZTXTZUNERDJENKLHKXYEMF |
3 1532 | T | G | V | null | -1468434616 | true | VOERCTXUKSWFGOETZUFCUBOPMIUMFYLGRXNUESRZQDSAYJBJPSXKJQEUTDCS | null | 0.69709331396258 | LKBKEYJKNTHRFDXBCCKBLVOSVEUQFWTNZKBFUZYSRXCKKTJLEUVPLGVIJEDMQLNYMX |
4 1626 | A | G | W | null | -1234394797 | null | LXAIMKCTVQNSDPJFZMDVOZIAHTCCKYPNKJELMEJCCCBAXESFLUYO | null | 0.8197576174215644 | GCPTTGMGCXH |
5 2229 | A | G | P | null | null | false | BVKGYBSVUHJBXPLIAMKDDPVNZURFTUUMHFZGRNHENWGVS | null | 0.6755240114928003 | GZKGHDVQLAAKWGAUODCZNFMRXEWAMVAFWWRYGGOTPRSHRUNJEPJICSFDIBMCDIQEETUIGTS |
6 2620 | C | G | C | null | 895549918 | false | EVVOZPUTFMAKDPSHTHARUGHBUTZYQGKGJWBPOXVODCKIZGLHJCVWJPDTEPZKMCQAQPJ | null | 0.5314847873660685 | UBDVXEC |
7 3388 | A | G | F | null | -1423684069 | true | RSXBEQNWBEYBTRLL | null | 0.4296410560398164 | GUXHJXRXWJUZTUYIHWWHCPJPBKFZBMNESHHXQXSIOOTQBYAMZRFKJC |
8 3459 | A | G | F | null | -253191553 | true | ZAOLSBMGEKFBIGQUKJLUZTUDNVRJBQVPCOIEJRXLFNYGZGASEUGGPSBVAVQAISGEPOGDMTZPNIWMONLAETYPXXUWRHTWRBBIFZW | null | 0.9132391862789185 | XGYVICKOAMFVVWSPTNCGQIEMXRMHTEIGRNS |
9 4247 | A | G | U | null | -1485168747 | true | ZZCQWQYUQQTKMUBBNRIJOSKIGWEOJWYMVUDHDFKUXNMTUYJP | null | 0.6893297325706504 | ICCOGOWJ |
10 4990 | A | G | E | null | -1344278569 | false | ZVCADPXDFSLLACZQMHEWEYJWJWQVRQKHZFHKBJCCBTE | null | 0.3814666823118418 | YLGVDHQHETXOLCKQWDSOOPYFTKEUSOFRMKCHTCDASCZBWYYWFGVFTKARFUSEWVKGOKVCBJRCITOZLVPZQXPTCAT |
11 5033 | A | G | P | null | -906435933 | false | WKOWUCMTSWCUNQIYBBUBAZLCDFWYENCGBPHXSRWAOUSCYHUHUBGDWQETIVGKEMLVCLMYKFYMDAGCGBDIDZEEHKQQHTZFSF | null | 0.14823447916521082 | null |
12 5422 | A | G | S | null | 611624727 | false | KCXIEUXXTAZJWFGWAAEQHSMCZYQXQMRPTPFNAEJFNLPAVTXNBSMPGICZGSAAKUXYRDHISD | null | 0.3279608991497672 | VBJWDLZISLBBZZLAFIYNIVADIWAXPTXTVODSUOZTPWRVHQMFXCKFYTNWGKENKRJLZXOPKYMRYUQSVPFUZGDDMXLOBWQRTANI |
13 6184 | C | G | B | null | 1352524414 | true | WFGVIBKKGFWKBYZYNSNTPANSIGHYIAIT | null | 0.6572028989146969 | WFONVIKAEYDXPOHDKZTCWJEGQOFABQPIKEPQYVZJDJKZSAFIA |
14 6909 | T | G | T | null | 133184282 | false | RVWHHYVCLDTIMJZUEMQPCYGQYRZLRREBLEBHRQZRGEYWHCEB | null | 0.4213289063379432 | ENEUPMRUWTMUTOOPMQNUGIHZTBJTLIFFBHNWHXBLGYGCTRNXIWGFMDRYLLISWKNUEIY |
15 7433 | C | G | M | null | -1265502299 | true | IQFMHOCPKFQIYOKFUCMTYDAXAWLEPFSOPHVFZUEFDEJNVDJVDIURYCMIRNPAQXDXXUOXPYASMSHLSHBDGHYGPIRBDKXCP | null | 0.11035167455949524 | null |
16 7665 | A | G | R | null | 1887352465 | false | | null | 0.1371791219940881 | KJKWNFXJFPCSFTBCOGQQMIQABGWIONUOBWHKOXRNGJGVRXGVGFTVBPELFIVQAXUJQ |
17 7797 | C | G | V | null | null | false | RJSFVGSMSRVAWKXGXIITFREYQHUQLXZIVVZTNGEXPPRGWIJFGNMKTZUOIZVXNXQZFDEBETGNMTOBLZLZLRAB | null | 0.9692319994043119 | YQCNFNNIKYQTFEOEHQDCMXXGNLSSWJIIPEMJKSOVNOHLLTOINNESNDAMNPABXDMDFIN |
18 8713 | C | G | J | null | -715903371 | false | TWLRZOEZULNPISAMSOKH | null | 0.34853580300939946 | YRYSGVHXBWNYGWXWVNWBBASTFMWIMPLAKWIQLCYA |
19 9305 | T | G | F | null | null | true | USOSSEKKLYORBIPYRJUDBIDCVFQZTUNWCGVSDIDIZXMDDAKTUAODSJAAKKPEEFFMC | null | 0.7560910517289061 | CRLMYTTAVQCBRJRCXBFMMMEUYDPQEFKJEZLOHQRTHZUBYWZORERP |
20 10073 | T | G | null | null | -2101849898 | null | null | null | null | FRTNVPWIOXYXTHTYNYBDM |
21 10618 | T | G | Q | null | -51540272 | null | null | null | 0.49606459663856894 | TSQRUUCAKFROSNQESIETCBYNCQKJDXWIHQVGONRRSGZRYORC |
22 10894 | C | G | C | null | 1733693192 | true | NXMJZATPEZATDQX | null | 0.046949657755137375 | QXOBMRHBACQREDBOCPCAQQYHVYMSZDYZLGDMWLBJJADJNZBAVO |
23 11121 | A | G | null | null | 1751860709 | false | PTFTXFBASLXSEJEJNCMXPXKEAEIXRRTZWOVCTBZXSFZEKHHLXZIXJKJ | null | 0.3631296843997939 | UKFPBAFIBSUFQUKPWLPNFFRJWMCUWIXPNTHHZZHADJS |
24 11149 | C | G | K | null | -1834436112 | true | null | null | 0.484931749035458 | UQMDKFXDIMSWQOFOJHETR |
25 11966 | A | G | X | null | -1524419715 | true | YPTCCKIUXDNSLHWUDRUSZUWXBVOUOUYTQUNPJDEXQEXRAAQDWLXMONCLSJNJFGBQRLQ | null | 0.84835007780834 | ZUUUVSTMVQTOLYAFTMUPXGOVUIDXQKLP |
26 12290 | C | G | Y | null | null | true | RDYIDIJFXVPQAKHPQEWWNHVSQLOTMXOVRAGOTTXTCDDIX | null | 0.7735367774957302 | DPVRSRMKLUCG |
27 13130 | C | G | I | null | -1865102407 | false | SEISSNATDXNUGEPQVNYFY | null | 0.023017356336717976 | null |
28 13221 | T | G | S | null | 1390831709 | false | YMTWLAEORA | null | 0.7488809318978249 | FHTNZLHHCQDWURHCU |
29 14019 | C | G | O | null | -713845357 | true | HDSTU | null | 0.5886779047530278 | PNIPFGNGFXOYMCPAZFZCSMNEYJGTFPZIVULMY |
30 14516 | A | G | B | null | -1931080334 | true | VBJPSNJTEHOWCPZLVRQWDHOYTRBOKNAZOGGLAHUDGHSLYCNLRITIOBZJSTXAOF | null | 0.5082776455915063 | DNN |
31 15400 | A | G | Y | null | 328926357 | true | HHFEMYPISXCFPBUDSQGLOBMZVVFL | null | 0.38678335946885756 | FFVQXUOBTPVATCWTSSEDAGAQRDSPMURZGGYMIELVHMRKLLCGOGZFFHLCYGTPEMXGDGHWYUWKWRPOEUAAVSFEFMTYWHF |
32 15683 | C | G | K | null | 183067280 | true | MTRXPBHFNJSKHXWIQWUUWZXQFUVXVAIJYKTFJOCXPZVUPWVJCUHEBBELGXUEAFPGVRPBBCUZUTIRNMBZQIBPCTG | null | 0.3756534924017908 | FJPGHPQTYOGNZQEAQKWLSYJMMVQSQTSRSIRD |
33 16331 | A | G | D | null | 1112100084 | false | TFCVMOPIMPXR | null | 0.3374087649226645 | QPOLYAIVYZQWDQPYHXA |
34 16772 | T | G | X | null | 2137995661 | true | WWMBNSJUJALKXXPVHUIRPUEIYKIREKZGFGBEAADUUMWYHAEHMXFNGJXNTYDVSJEYOUPP | null | 0.7380289283033604 | HHLJEBZYNSDERCMAIXBNIQRIEMDHOQFQNJQUXLEAMIG |
35 17379 | C | G | R | null | 1496757995 | true | null | null | 0.019616703487471354 | FHE |
36 17731 | T | G | X | null | -1043624329 | true | RFFF | null | 0.5595993590466001 | OUPEHPKRIHEMLGVFOGEXQAHOSMXAJGLFIOEWERSVVSAJWPPTK |
37 17904 | T | G | D | null | -493289939 | false | ODLHHZGLMBQAJLGCZOUMEVVTADJIMOLIXKBVOTCBFCXQXRORIHAGVGOEUXJCGASKRFLVSUERWOAEHZWLSQJATLMHBLMPHX | null | 0.9773485813955075 | DPHXFJUVINTKURUNTGXBCRIYGMXGLYBFIHLNCHAUOTOBMXBPTXHXONSYUZUFENSQQWZBPWGGGPCOY |
38 18369 | A | G | R | null | -1253111176 | null | null | null | 0.7531890445183089 | RWTPNJDWQYQEYTRZGFJYAWMGVKTNMFTZSOSWWVM |
39 18486 | A | G | M | null | -770412890 | false | WXWMONEKKHMGZCBTCVGNNODWGLUYIKDTOPVYHTILJJSHAQMNRSPVOKGXZIMBNHOHFIO | null | 0.6664746210351404 | WHVBMIISKYUETNMSZMQMOXJFESSUVIOIQBGIVNRJO |
40 18925 | A | G | null | null | -913804880 | true | BFTTAFFZUAIURYMGGUWLAUKSTJQACGSGRAMCVDIGDQCKOTDGCQOGRHZTCYBZORDEBIMVHW | null | 0.043241162334179184 | QAMTRPVRWFEGXRZRFDZRKFJOMCLPT |
41 19568 | T | G | H | null | 1045464768 | true | NGHXL | null | 0.5839079139597713 | KXKDGWDDGQCUCQXBOMEYSHEELIYNVOKDHIXALLPUSAKUWJOTDSNJKSFBXNRJBTUVDIAXJXSRAABIXF |
42 20322 | C | G | E | null | 848570807 | false | COUTKXIRBMYCWNUDNNGDBTLFEYVTQKTOGHTWJCOISHZBCOERGUMY | null | 0.38030197361129114 | GCQDQQEEPBAXJKYOLRXTHOYVQIXLQNZJEFFEIOQAEKWYKMIVESHZXXEALXRGCNLDFIXNZUPCZBSDO |
43 20458 | T | G | Z | null | 537861259 | true | CHTPHGWMYYPIWPAHZMSNEIIVXNKHDIKC | null | 0.856910720250756 | DFJJHTKRYJFYFQLAKZUSSPYAPSWBQETRQQLRESQTQPMYWUY |
44 20483 | T | G | D | null | -999237583 | false | AN | null | 0.6592938128291357 | RZVVKWQMAPZOPDSXSKNPUUTRASSVAQLBASZKUOAQXSZYHTFPESQNYFKQEPAPSQQOQTKLVFPHTXHKJQVYAMKHLOWPTSYXUYRRGG |
45 21038 | T | G | O | null | -1947818663 | false | HLOFXYBMYZTQXJUFDEFEAIUVTSPDSNVBUBAJUXSDHKHHCKPSLSDCLUOIJTCPZTXKZAMMIUSGJP | null | 0.8482923893211213 | HLZDKCZJYFXCWGKYBDKQCOPZCRZCATNTUFFAAFWFFSVSBS |
46 21113 | C | G | Q | null | 1411429955 | true | JUUTROOOTNOWPKPFZRWZGJGDREVYFYKPCKEHLAWCLGIHAGDZCLUGEUPAZPLXVMDCCMGQOMKTOVGLR | null | 0.7530274401586365 | HJFIMPPDVZXFSSIZVMSEVENLFRCLO |
47 21584 | A | G | V | null | -1818342568 | false | SRGLUGVEHLXDQTTSIJFGCAHRXFUYRWJHGVJZCGXHLBHRLBCINDKY | null | 0.46853294197429063 | GRQOOBAXHWOPEORODIVFVMHWOXP |
48 21719 | A | G | I | null | -1383251385 | false | QKIFLWJJTKVIJQLBOIDWBLDVMGPQODKOLTDOBNXUKJDPVJPSOBEOLCFOWQUAECVTRUGBQXLOOINVKQYHM | null | 0.7763475019948253 | TKJBNDZXHKWLUOGGPCVERAXXO |
49 21892 | T | G | L | null | -71968993 | false | VGKGUNPFZAZQHYKIPFDMLTTAXEEGFQ | null | 0.074609705848941 | LLNINAULGHKESUDFREILZDQYXXHJCL |
50 22050 | C | G | X | null | 447646330 | false | null | null | 0.5909248061156072 | TLWRADKLNSWY |
51 22447 | T | G | Z | null | 805335840 | false | KNTNRRWSWPOQJYEQWTHBQXHRKWBEPZCHIAWMAK | null | 0.47815630010183885 | OFHVRVJGCXKJZJDJCTJ |
52 23180 | T | G | V | null | 1324293778 | true | FNCFTYYJLZYMGNTENXHJSBPOTDAUKOTRZLNYAYGFBKVSHHTGIFDDJOXULGGPJTGVP | null | 0.9381800089060516 | MVWKCQOPWFYZOOPPWEJLJAXEAFQWFNTTHBRNQFDCVJHOASYFSNYLHTKKYEXOXXC |
53 23254 | T | G | I | null | -1980411442 | true | null | null | 0.9830382067879199 | JBBEKPQSARFFXUWDNIYWXADIYLUONTQMETNMCPYCW |
54 24179 | A | G | L | null | -276422557 | false | FNPVQXTQLDDLRNNWGPVDMZCMWALBHBZSDNPAZQNUZCBTVECALP | null | 0.34670610455245865 | FUGVSFLODMYZHILGJSYHWBHIFILQDC |
55 24714 | A | G | E | null | 936970436 | true | GPLJGZKGBBUEWZXQRUFHYOHQSASWDVQTYZFJUUCLNKWXYBNO | null | 0.3098816310163274 | I |
56 25595 | C | G | Y | null | -537826507 | true | URGROVHDGOLLVMWBULF | null | 0.0737720909558438 | BOOHSFOW |
57 25851 | C | G | X | null | 922901315 | false | CTREWKRHVHNGEOUBU | null | 0.22945500318593115 | NVRUEZJVGIUWTXHUDCOQYZFPZLVEDGKFHPAFTMIKDCKWPZQG |
58 26343 | A | G | I | null | -1441464962 | true | OPMKWBRCLYRXXABQJIXFRTNVCQIBZZQJAARJSGJOTHK | null | null | NPAYTHIPNCKCARBOCHEUDXOHXBODYUAKYGAHTLQELXYTJNNNPXLEGILTKJKBPLEWXUAUUEGQTK |
59 27229 | C | G | V | null | -1062308551 | true | RQSN | null | 0.05046136960776815 | KZHXRLNAKXKBXLTNWDOSJTUIFRSBDIILLCGQGDPFJVTKNEZBOQHXUGGGGXVAUPORVJZTOJMMUPECSV |
60 27467 | A | G | H | null | -868387021 | false | XEYZYIMSZQHIQYVCYDEEBKTFLFFLUFTSGJBQGYPKJPUATVBRLNYHIUPECZ | null | 0.7236564509158407 | null |
61 27517 | T | G | I | null | 489970648 | true | | null | 0.3142292144917068 | VIVMCRZGOEXFHZBLHXADISRKTIKXYMHTGDHUFIIDBYCTEUXSGVRGHDPVVEJASWCQDXMSCM |
62 28195 | A | G | Y | null | 24528819 | true | QAPH | null | 0.7707821899345295 | TAWTAOUNAYMHGNEWNYWEDDDCHLHPAMMBTCCY |
63 28489 | A | G | null | null | -1933589312 | true | BDBLQWQTZGEERZXKCHCRVOGQDTZPZQRZIACBFBDNF | null | 0.6186961406973683 | ESSLYGJQVJSBTUZISTJZGJCDRPCNJCMTEKILBJSYNPCHNBHOVKEEOIDGCIPPPILVE |
64 29104 | T | G | R | null | 875444104 | true | null | null | 0.1565787402470541 | IVCNFXLMUOOKIRSCDIVMKWMUBVINKPGRFPAXZAQCYNCFHHGTIV |
65 29455 | T | G | null | null | 980721615 | true | ZWKGGQCSTRTLHEEGLMSAWQTGULKMUEBFERFVNVUBWFASDAKTYBUSRKBLDDWEO | null | 0.4622995304977632 | QFIGJUIQDVGBK |
66 29962 | A | G | D | null | 1390914368 | true | X | null | null | VJBHDJDCOBKBBYHBFZDGHGIFVID |
67 30800 | C | G | T | null | -635403909 | true | YPFVQNKFDAHZSZPMHFLCLYQVZEKQBOLPHTQ | null | 0.5203201732185717 | EXDSRBZJGXWOWHUPIIIRKVSTHEUQCNVKQSNISLICNKDKOMRLKHNSPEVNUIRNSROCBCLTA |
68 31637 | T | G | S | null | 987859431 | true | ZYNBPVPBWIETRLFHEHQZLKAWOOVRGFJQKVJRPQASSROBWVZDJKOCRCYMTXUBTDHUANHSZR | null | 0.7381053961388984 | JQQUKIIAPGADLZGNPSYEUDVAJRCRBBKCGZALLRDVNCSQBWFUIKAV |
69 32437 | A | G | G | null | -762253484 | true | AJHIZFPZJVLKFQHDWSTGPETVKXCXKWHSIMDNCPPXMPDZVJUAGJEZKKCJCLUBGMVFISLNJICNTQK | null | 0.7473205676299366 | ZSBYHGCJJCH |
70 32539 | C | G | D | null | 2099808094 | true | BZVLBZNPJBGGWENLYYCJTPADCDDQOGHM | null | null | null |
71 33017 | C | G | F | null | 2049461907 | true | YDBVMBDDWTLH | null | 0.19308796469213663 | UXNYIRQCUBYGFSIMFYUAOECXQBGSKUSCEPQAOEVABQVGYCHUOTAEUPCXSMJBZN |
72 33318 | C | G | R | null | 1268480895 | null | FMWTOZMHCMXPFIOFRZAWQCTHQNXHDVMXZWXANQSZMAQJJKHDMASERCYWAWEEYUQ | null | 0.7337084268772609 | PNIWYMDJFTUBBMZZFWQYCCSALZJMOLGKLDXZXVZZI |
73 33519 | T | G | S | null | -378279969 | true | CYAOLFVXWCCSCLZTPSWEZOISZGQEGOAGLBNEVBDRXIXKVQHAMWTPLWPNHKVQVL | null | 0.17906540472431376 | BFWBJNIIFDYZWDSDUABTFOWDJHCNWEFLHQSSDKFHQVLDLEYB |
74 33619 | C | G | J | null | 471210071 | false | CTJXHBDBIDKXPHFOTFRATSTVGMMNADVITTBCUBYQEBQREDVKQVRWCEFSWRGIDIFQAFZGNEUXCUGFHDUYGCNDAMPRDVDPCCT | null | 3.3798591568623415E-4 | AHKHSJBEALCXXDQOQGKMWQYUNAVYXZLMSHZQOQAOMXYIBMPQHOMYJBNEODMVE |
75 34464 | C | G | D | null | -856376734 | null | TFNBOQDFQOSGIMGDVIDDYSIARMFNRXIDQWTWJFLQPICWLAKPW | null | 0.28175891452276325 | DZFIQAKSFLJFVUGJEAODATZBRRLBEQPWOKOXKFCDSZTVBKMHRHBLGOAIHY |
76 34890 | C | G | G | null | -1152296235 | null | FINELWGCHTRZWHGPSJQDOVVDARUZRDFCROZGNNKLYMOPBGVKKEECTYFDRMGCEZDPHFWRRB | null | 0.2975479182293854 | RVHWTPPXLDCEUJVNDMTNWIVWAUWXGGLUXIOZZRBJJIUCGRJFDBUXNZCRQNAITMRTB |
77 35394 | A | G | H | null | -1917945158 | false | QJJVJXWLRQHRDMENXXUODKYHXTZMYUWDVLMXUWUJVJQOFO | null | 0.6775121531908064 | CQVYZEBMKVBMFPHNELKLQQTKDBYWMMMLOMWDKEYBUTFMOPXQHBHWYXRNQZTIPAXUATFOMJWEUBBMYDPULQZMZEDELHUCD |
78 36217 | C | G | Y | null | 1000815122 | false | HNAJEWWRVWIZSGQPVZ | null | 0.8305474834928933 | AJLIVJLLIV |
79 36345 | T | G | Y | null | -820581671 | false | QKXUPYHKVOPS | null | 0.22862666220394212 | LYWEHVGXFPHAAUDGWKSKVEWCKVJHOOKWRVKHV |
80 37207 | T | G | Q | null | -1438935715 | false | XRABRZWJEAEABTMFLNYIAJYPSXDXCZBQOPQMSFJNWUVWDOSQMSWTUMIUHOZCYODCFABSKEDD | null | 0.7864728771537823 | FXQHIJKMWIEKPDQQBBTBRGBKZFMCMBEVLOGANDMKAZJMHLLIYBKTOJGDTUTFKJQGNEXEKZSZQSANB |
81 37973 | A | G | null | null | 162272412 | true | ULYYCBUUEXHGUEQLVFIECDHCJEXBPZTNNUGGNQR | null | null | NRWSUYVVSOYHJJNH |
82 38001 | C | G | J | null | -458414969 | false | GEOPFRVIOUHAVSYGXMMWZEJTKLGQIGRWFRRQPOKVFNLUBIYFBAUNPDVYDOXEKTMBUOBZBKLTJMSURAYRXBCQMBFCCJLLATENBR | null | 0.35702342227267614 | XXCLCCPJ |
83 38376 | A | G | B | null | -1025096135 | false | BYHCWLKKNLPUGLUZPEPQWRMMWVETGLEKPBVHLRZZCIVSXZRKBEOERVKN | null | 0.1274717880636046 | DQXVTUTLCCUOEWSCGDKYTEGYYT |
84 39232 | T | G | Z | null | 134823712 | false | FJUZPNNKYY | null | 0.9240522105340442 | UKFCWVILOIQRMKLWKVIMPSQGQQNCWUOOODFXZXMMRLQOTVYZPCMT |
85 39422 | T | G | M | null | -206113243 | false | QBBRFRJGAZJFYSHSIBGCAUOFFYVSTFHZXHGROHWPSYMDCUYXFUMVUZPPYMJWXLTJFYYYLFMIRHTQKHVRPKBIKEQEHHEFPDII | null | 0.4713315365446201 | NSOIUBJHU |
86 39588 | T | G | A | null | 522904370 | false | GCLPAAEWFHXXHZSKILOGWYTQNLEWXWBHGEOLXJAFLXULPZGOHHPVYKONTTVC | null | 0.909186193288043 | NDIJQWVENOKRPELATYNBXBIXFNZNJOPDWFPVEGBDMNZOFIEPCPEANBDLHYXXFKJMJVZNNV |
87 40544 | T | G | H | null | 955552733 | true | EYHZSGIQQETOESYPHFJTNZIUKYPRCYFYRJTIMZCUTWALOTK | null | 0.9599747857646441 | LUIDGCGAOOIWYYNIQHONRKHLCUIXZZIYXHYQTEPKZLFFDE |
88 40793 | C | G | B | null | -1835659221 | false | DLKYANUQQSBHHFNJMSBKHRYXQMXNCHRFXSPGAOWMOMIAHSXGQAOJVNMALPLDEWAFVWFQMSSRMHZWJVVUOM | null | 0.19161888431855756 | IQZBDVRTNVQWSKUSZKIYRSHCZHDRLFULNBVZYMWMCWSNATKMXIBTIDOMJAMIHYVSZPXVTNOEXWQQVTGTYHRYIKS |
89 40894 | C | G | K | null | -1649622296 | true | IJOYSGWEIOFGIUXBMYTCTJJQZLBEI | null | 0.4565401967896783 | UBIQSXJJIMPZRAQRPGGYYEALDQDPRHSPDBXOVSQDYPTSBOHIXPFDYCF |
90 41110 | A | G | Y | null | 998107454 | true | null | null | 0.173068587122447 | SSXEVDGHUMRBMPSIPOELOIZALCSFUBICUYVGZRUCWQPBGBNWRLKDJYERMIINDEAFXIIBLWZYU |
91 41624 | C | G | Z | null | 1957246546 | true | null | null | 0.8627830350098948 | JFYKYFBXNSVJTLWNH |
92 42362 | A | G | J | null | 1654471166 | null | EYFHHKORYXGSGMUZOCDLFZWPTVNSBZCISAQEHRFONPWQQXCDPSXOBUVDYUVX | null | null | LQTYJURKMRXYHDULOETRHFDJWPUVXZZYKIRENGVZILQTXAGJUNMNBZSMODRXZBYFDZCXTCGTGQRTIAPDDYSLBH |
93 43223 | T | G | L | null | 866749522 | true | VRQYCMJAMIHTRDJLBERTXDYQZAPBEVZQOPJLNBCCVLDOBFFIBXIWYNWPONALNRDOUUIZOZANCF | null | null | EZZGWQFYSTPSRJHDKBDZEZWMWLJVVMMXUVVGHNVOZYPQRDQXSFUDEHXTGNQQDVBKIEZBVIVO |
94 44167 | A | G | D | null | 131702367 | null | null | null | 0.8489882460239491 | GAVYBXSVREXJZHHTSPHAHLUYTGFNUMWYCYFWSDUVNNDFUBOGYSZGEJGRUQMKXJIAKLYIUGICLVU |
95 44535 | T | G | K | null | -147373767 | true | WVRPVPBOAIVXCWSQVTZKNXGQLGWRORVMYYKPYAMAZCXGYJCAL | null | 0.8881914112592243 | XONPKQUQOCSOLGKFDASKPMDBASJYUSZRTKHCHMKEYIGEGGZUDIMTLCOYYXOYESTZVLXIYH |
96 45355 | A | G | V | null | 563465342 | true | XEGXNLLREPZFWVCTQTH | null | 0.7018378621643794 | WQEGYA |
97 45645 | C | G | E | null | 1512920697 | null | QGIIUKQTGFVSEPVTJSEWOEWXDUVMQMTIHNQPTSFSEQDBHZBNESFTNMMBHTCZRTQJGILVEEPCHTEGAXQH | null | 0.193414500648447 | |
98 46622 | C | G | F | null | -597676374 | false | PVODXUFKNLGZUIAZNNDFNUFAVMYECUHCAZJBYCLWWKTSGVRHGNDOZBRLYNCQJNXKGTZFGXFMSSZQVMYCFSVU | null | 0.9002014226502575 | NIOOVESGTIPFVKUARMUBGZXYUKKFAFXYZOHHJFVMANHSBRDCSOPTTCSZJSNBGPIFIBAHZYTPMRBMYNJMWKIS |
99 47565 | A | G | A | null | null | false | AYFMRFB | null | 0.6745896400668322 | null |
DataFrame: SNP_T, size: 100, current index: 100, memory: 63.4 KB
Field types:
##INFO=<ID=field_char,Number=0,Type=Character,Description="">
##INFO=<ID=REF,Number=0,Type=String,Description="">
##INFO=<ID=field_int,Number=0,Type=Integer,Description="">
##INFO=<ID=field_bool,Number=0,Type=Flag,Description="">
##INFO=<ID=field_string_2,Number=0,Type=String,Description="">
##INFO=<ID=ALT,Number=0,Type=String,Description="">
##INFO=<ID=field_float,Number=0,Type=Float,Description="">
##INFO=<ID=field_string,Number=0,Type=String,Description="">
0 130 | A | T | null | null | 1325939940 | true | EHPBPZOQGQUUVRTPOVSQENPLWOJYBWQKVGUIHFQWUSYUOXQ | null | 0.7077105889551186 | LZORARZVMGTYMKSHHVGLPKFFVDPCDVBXJSQCOQZPXBTJGJYGUPJFGVNNNHQUDVOYXEBBPQ |
1 757 | A | T | L | null | 117313442 | false | AEGILYUTDVAIFEOZYGHKARCZKVIZSFEDWAATTXBGT | null | 0.4686717016077616 | |
2 1425 | C | T | N | null | 38453561 | false | SSYJWT | null | 0.5214943036897558 | TZUNERDJENKLHKXYEMFMQTLZADZBNDXVFRJHSDKMELB |
3 1611 | A | T | K | null | -1179185161 | true | BLVOSVEUQFWTNZKBFUZYSRXCKKTJLEUVPLGVIJEDMQLNYMXTSWVOERCTXUKS | null | 0.7648226592427628 | THRFDXB |
4 1775 | G | T | B | null | 1962816760 | false | FGCPTTGMGCXHAYYLXAIMKCTVQNSDPJFZMDVOZIAHTCCKYPNKJELMEJCCCBAXESFLUYOJP | null | 0.8837630591185496 | YLGRXNUESRZQDSAYJBJPSXKJQEUTDCSYARPMLCBJQVLWO |
5 2451 | A | T | K | null | -1816709355 | false | SVUHJBXPLIAMKDDPVNZURFTUUMHFZGRNHENWGVSRDGKVKARTBDCKYMOCEFUBDVXECTMHEVVOZPUTFMAKDPSHTHARUGHBU | null | 0.8398659092547522 | KGHDVQLAAKWGAUODCZNFMRXEWAMVAFWWRYGGOTPRSHRUNJEPJICSFDIBMCDIQEETUIGTSZJPBVK |
6 2982 | G | T | X | null | 1274612112 | true | PJPBKFZBMNESHHXQXSIOOTQBYAMZRFKJCJOARSXBEQNWBEYBTRLLBJTOPXYAVBUFKFXCYZJXGYVICKOAMFVVWSPTNC | null | 0.030443143763536518 | GLHJCVWJPDTEPZKMCQAQPJUIKUDWOJEACFAGHAJUAGUXHJXRXWJUZTUYIHW |
7 3126 | G | T | I | null | 590931301 | true | YMAVCOMBUUTBXWQKICCOGOWJJGUZZCQWQYUQQTKMUBBNRIJOSKIGWEOJWYMVUDHD | null | 0.7618362942935621 | ZAOLSBMGEKFBIGQUKJLUZTUDNVRJBQVPCOIEJRXLFNYGZGASEUGGPSBVAVQAISGEPOGDMTZPNIWMONLAETYPXXUWRHTWRBBIFZW |
8 3391 | C | T | Y | null | 1797260009 | false | TOZLVPZQXPTCATSLLZVCADPXDFSLLACZQMHEWEYJWJWQVRQKHZFHKBJCCBTEBDJKRNQUULWPMBXF | null | 0.7131587768334366 | ZVEUUGMRBHYLGVDHQHETXOLCKQWDSOOPYFTKEUSOFRMKCHTCDASCZBWYYWFGVFTKARFUSEWVKGOKVCBJ |
9 3483 | A | T | M | null | 1715384389 | true | GB | null | 0.2693438403479881 | IYBBUBAZLCDFWY |
10 4060 | C | T | Y | null | -1903781789 | true | WAXPTXTVODSUOZTPWRVHQMFXCKFYTNWGKENKRJLZXOPKYMRYUQSVPFUZGDDMXLOBWQRTANIBWUKCXIEUXXTAZJWF | null | 0.6290131566875504 | WQETIVGKEMLVCLMYKFYMDAGCGBDIDZEEHKQQHTZFSFVYKAZIZWLITSIBGVBUMVBJWDLZISLBBZZLAFIYNIV |
11 4316 | G | T | Q | null | -2141120660 | false | RDHISDKIKEXJRDMJIBLOBLSKDWFONVIKAEYDXPOHDKZTCWJEGQOFABQPIKEPQYVZJDJKZSAFIAAHSWFGVI | null | 0.32240371096877196 | FNAEJFNLPAVTXNBSMPGICZGSAAK |
12 4615 | G | T | S | null | 963269520 | null | GHYIAITLYHHFQBGA | null | 0.839962533275974 | null |
13 5362 | G | T | N | null | -787565319 | true | LIFFBHNWHXBLGYGCTRNXIWGFMDRYLLISWKNUEIY | null | 0.4741834740049925 | TMUTOOPMQNUGIHZT |
14 6227 | G | T | V | null | -649702826 | true | FQIYOKFUCMTYDAXAWLEPFSOPHVFZUEFD | null | null | ZUEMQPCYGQYRZLRREBLEBHRQZRGEYWHCEBYNFJGRCAUIVMXQXRDXKNXIQFMHO |
15 6867 | A | T | R | null | null | true | GFTVBPELFIVQAXUJQEJUMISRBUUMGFVSGRPTS | null | 0.14244474729162748 | AQXDXXUOXPYASMSHLSHBDGHYGPIRBDKXCPUUXUBSELUPRBRXWHBLPLKJKWNFXJFPCSFTBCOGQQMIQABGWIONUOBWHKOXRNGJGVR |
16 7334 | A | T | Q | null | 1823663894 | false | null | null | 0.7773190912838853 | DCMXXGNLSSWJIIPEMJKSOVNOHLLTOINNESNDAMNPABXDMDFINZHSRJSFVGSMSRVAWKXGXIITFREYQHUQLXZIVV |
17 7389 | A | T | G | null | -364148997 | true | UZSKCFJZPOWKBQYRYSGVHXBWNYGWXWVNWBBASTFMWIMPLAKWIQLCYASAYTWLRZ | null | 0.32665530046016367 | IZVXNXQZFDEBETGNMTOBLZLZLRABIW |
18 7885 | G | T | A | null | -1236886794 | false | EKKLYORBIPYRJUDBIDCVFQZTUNWCGVSDIDIZXMDDAKTUAODSJAAKKPEEFFMCGPCRPYIKDMFUPNFRTNVPWIOXYXTHTYNY | null | null | ACOJSAMYSFHFDOWTMCRLMYTTAVQCBRJRCXBFMMMEUYDPQEFKJEZLOHQRTHZUBYWZORERPCZFUS |
19 8210 | G | T | J | null | 1689625755 | false | CAQQYHVYMSZDYZLGDMWLBJJADJNZBAVOB | null | 0.9615764869110734 | TVATSQRUUCAKFROSNQESIETCBYNCQKJDXWIHQVGONRRSGZRYORCGVCJXSQSUFGVPCCKOEMOWWQXOBMRHBACQREDB |
20 9034 | G | T | Z | null | -1592120268 | null | BSUFQUKPWLPNFFRJWMCUWIXPNTHHZZHADJSGVZPTFTXFBASLXSEJEJNCMXPXKEAEIXRRTZWOVCTBZXSFZEKHHLXZ | null | 0.9695903512350196 | XMYLARYBPGPAPLSOYBUKFPB |
21 9162 | C | T | I | null | -2060828797 | false | BHOJWCYZUUUVSTMVQTOLYAFTMUPXG | null | 0.8728101636899569 | LYINUQMDKFXDIMSWQOFOJHETRGRNTRCEOBDT |
22 9472 | A | T | E | null | -831335741 | true | TQUNPJDEXQEXRAAQDWLXMONCLSJN | null | 0.8662825730007576 | IUXDNSLHWUDRUSZUWXBVOU |
23 10001 | G | T | F | null | -1054289511 | false | PQEWWNHVSQLOTMXOVRAGOTT | null | 0.9908923980683975 | OHSRXWUDPVRSRMKLUCGTCFRDYIDIJFXVPQ |
24 10314 | C | T | J | null | 1831784974 | true | EVWJSEISSNATDXNUGEPQVNYFYDKVSQ | null | 0.934190982794041 | IGP |
25 10483 | A | T | P | null | -1786016068 | null | | null | 0.8711382334857547 | NZLHHCQDWURHCUCFMYMTWLAEORAANJSPJFRKXQOSMDDYBVPNIPFGNGFXOYM |
26 11278 | G | T | null | null | 133844865 | true | GBCJUBZXLDNNXPCVBJPSNJTEHOWCPZLVRQWDHOYTRBOKNAZOGGLAHUDGHSLYCNLRITIO | null | 0.587222927544775 | LMYLCDHDSTUTUSRRDM |
27 11479 | A | T | H | null | 758453846 | true | KLLCGOGZFFHLCYGTPEMXGDGHWYUWKWRPOEUAAVSFEFMTYWHFBGMHHFEMYPISXCFPB | null | 0.2292387309942473 | YYHZGVIWJFFVQXUOBTPVATCWTSSEDAGAQRDSPMURZGGYMIELV |
28 12253 | C | T | V | null | 1878366945 | true | TSRSIRDVTNMTRXPBHFNJSKHXWIQWUUWZXQFUVXVAIJYKTFJOCXPZVUPWVJCUHEBBELGXUEAFPGVRPBBCUZUTIRNMBZQIBPCTGQ | null | 0.3397356585960569 | XUCJTEKJBHRBKIFJPGHPQTYOGNZQEAQKWLSYJMMV |
29 12723 | C | T | R | null | -301506404 | true | AIEIOUMPNXSABCPGVHHLJEBZYNSDERCMAIXB | null | 0.9176030675129526 | POLYAIVYZQWDQPYHXAJOITFCVMOPIMPX |
30 13204 | A | T | F | null | -117338812 | true | CUDRTBUEEBJFHEBUIHMNHWIMEDVXAMQMWWROUPEHPKRI | null | 0.9947358996478333 | EAMIGIACWWMBNSJUJALKXXPVHUIRPUEIYKIREKZGFGBEAADUUMWYHAEHMXFNGJXNTYDVSJEYOUPPNBVRP |
31 13287 | A | T | Q | null | -705793227 | false | SAJWPPTKAZQRFFFVRYSYVBDJNEDJSAMHXJD | null | 0.17122732654589223 | JGLFIOEWER |
32 13566 | G | T | null | null | 1434911494 | false | BPTXHXONSYUZUFENSQQWZBPWGGGPCOYIRUODLHHZGLMBQAJLGCZOUMEVVTADJIMOLIXKBVOTCBFCXQXRORI | null | 0.14076882752881215 | RIYGMXGLYBFIHLNCHAUOTO |
33 14191 | A | T | C | null | null | false | XLKKCJCRPRWZMRUHRDHRWTPNJ | null | 0.010961659191682793 | VSUERWOAEHZWLSQJATLMHBL |
34 14618 | G | T | null | null | -247877827 | true | EKKHMGZCBTCVGNNODWGLUYIKDTOPVYHTILJJSHAQMNRSPVOKGXZIMBNHOHFIONKJDLE | null | 0.5181463969519201 | VKTNMFTZSOSWWVMRPXNYNXLQTNZOAMMXFPMGJWHVBMIISKYUETNMSZMQMOXJFESSUVIOIQBGIVNRJOMZVWXW |
35 14885 | C | T | B | null | null | false | PDSDLDEGQHTUUHBYSKXKDGWDDGQCUCQXB | null | null | TRPVRWFEGXRZRFDZRKFJOMCLPTTEKBFTTAFFZUAIURYMGGUWLAUKSTJQACGSGRAMCVDIGDQCKOTDGCQOGRHZTCYBZORDEBIMVH |
36 15081 | A | T | N | null | -189425403 | false | null | null | 0.6698811404834022 | ALLPUSAKUWJOTDS |
37 15243 | G | T | V | null | 1510802014 | false | MQFNGHXLSOEAJKVRSXRELHZXDYXGCQDQQEEPBAXJKYOLRXTHOYVQIXLQNZJEFFEIO | null | 0.18208131838996633 | RAAB |
38 15317 | A | T | S | null | -1884692267 | true | UMYYDMVTOZFRCDZWFXPYAZDFJJHTKRYJFYFQLAKZUSSPYAPSWBQETRQQLRESQTQPMYWUYT | null | 0.7400498644327095 | XRGCNLDFIXNZUPCZBSDODUKCOUTKXIRBMYCWNUDNNGDBTLFEYVTQKTOGHTWJCOISHZBCO |
39 16226 | C | T | null | null | -1019440614 | true | | null | 0.3173623047846922 | ZMSNEIIVXNKHDIKCPEZAYOPAVIWWDSBKGVIERZVVKWQMAPZOPDSXSKNPUUTRASSVAQLBASZKUOAQX |
40 16755 | A | T | F | null | -753227527 | false | null | null | null | QQOQTKLVFPHTXHKJQVYAMKHLOWPTSYXUYRRG |
41 16899 | C | T | C | null | -1075446186 | true | DKCZJYFXCWGKYBDKQCOPZCRZCATNTUFFAAFWFFSVSBSJYSHLOFXYBMY | null | 0.35504209319484414 | THKU |
42 17272 | C | T | T | null | -17667716 | false | CKPSLSDCL | null | 0.1475002958851096 | UBAJUXSDH |
43 18030 | A | T | Z | null | 581523007 | true | null | null | 0.41839959918022074 | JPTSJDTKELPQHQDIEBEXBHJFIMPP |
44 18221 | G | T | E | null | null | true | EUPAZPLXVMDCCMGQOMKTOVGLRHFHNQMBPQZMVYTJOPTTGRQOOBAXHWOPEORODI | null | 0.44806773421618973 | LOJVRJUUTROOOTNOWPKPFZRWZGJGDREVYFYKPCKEHLAWCLGIHAGDZC |
45 18256 | G | T | W | null | 578554250 | false | DKYLGDKTYCLAZVICTNRXSDTKJBNDZXHKWLUOGGPCVERAXXOAVLQKIFLWJ | null | 0.04624360636075597 | EHLXDQTTSIJFGCAHRXFUYRWJHGVJZCGXHLBHRLB |
46 18855 | C | T | D | null | -274592687 | false | CVTRUGBQXLOOINVKQYHMPAUEYVOVQMQOLJLYKIUWLLNINAULGHKESUDFREILZDQYXXHJCLAUMVGKGUNPFZAZQHYK | null | 0.295082569110763 | PQODKOLTDOBNXUKJDPVJPSOBEOLCFOWQ |
47 19093 | G | T | E | null | null | null | XHRKWBEPZCHIAWMAKDQYRBPZBSVDVUVMAOYDMVWKCQOPWFYZOOPPWEJLJAXEAFQWFNTTHBRNQFDCVJHOASYFSNYLHTKK | null | 0.6326350077170896 | LBBHXRCJVLXRLFKYGSTLWRADKLNSWYQIJLEMSYPRLUMZYSMRUPTOFHVRVJGCXKJZJDJCTJBMSKNTNRRWSWPOQJYEQWT |
48 19309 | G | T | C | null | 1012923803 | null | YLUONTQMETNMCPYCWDFLSHSINSSHZSFLFTPM | null | 0.9752018491920234 | LZYMGNTENXHJSBPOTDAUKOTRZLNYAYGFBKVSHHTGIFDDJOXULGGPJTGVPOEXCNXBDIORIOEWPXUPJBBEKPQSARFFXUWDNIYWX |
49 19944 | G | T | D | null | 1859314744 | false | | null | 0.057459817044769324 | JS |
50 20293 | C | T | F | null | -1573766194 | false | AL | null | 0.6628424521893181 | LDDLRNNWGPVDMZ |
51 20824 | A | T | N | null | 2003236284 | false | SASWDVQTYZFJUUCLNKWXYBNO | null | 0.11372914407281842 | CALPBVRYGCTNGWNEHDQFNZRIJLEGPLJGZKGBBUEWZXQRUFHY |
52 21705 | C | T | Y | null | -537826507 | true | URGROVHDGOLLVMWBULF | null | 0.0737720909558438 | BOOHSFOW |
53 21961 | C | T | X | null | 922901315 | false | CTREWKRHVHNGEOUBU | null | 0.22945500318593115 | NVRUEZJVGIUWTXHUDCOQYZFPZLVEDGKFHPAFTMIKDCKWPZQG |
54 22453 | A | T | I | null | -1441464962 | true | OPMKWBRCLYRXXABQJIXFRTNVCQIBZZQJAARJSGJOTHK | null | null | NPAYTHIPNCKCARBOCHEUDXOHXBODYUAKYGAHTLQELXYTJNNNPXLEGILTKJKBPLEWXUAUUEGQTK |
55 23339 | G | T | T | null | 279611636 | false | ZBOQHXUGGGGXVAUPORVJZTOJMMUPECSVBKGRQSNGDQGTNSIEYGJHVFJLXUAKKXEYZYIMSZQHIQYVCY | null | 0.8387849487433041 | CKZHXRLNAKXKBXLTNWDOSJTUIFRSBDIILLCGQGDPFJVT |
56 24316 | C | T | U | null | -651937236 | true | SWCQDXMSCMKQSOUBBBVBJRYNYSLDLERQTAWTAOUNAYMHGNEWNYWEDDDCHLHPAMMBTCCYEASQAPHIVZCCVY | null | 0.7942255149817324 | GYPKJPUATVBRLNYHIUPECZERSOMBIFLOGISAKLNHGVIVMCRZGOEXFHZBLHXADISRKTIKXYMHTGDHUFIIDBYCTEUXSGVRGHDPVV |
57 25184 | A | T | F | null | null | false | KEEOIDGCIPPPILVEHYJBDBLQWQTZGEERZXKCHCRVOGQDTZPZQRZIACBFBDNFDLHOOWLPE | null | 0.34530944605958225 | QVJSBTUZISTJZGJCDRPCNJCMTEKILBJSYNPCHNB |
58 25822 | A | T | V | null | -1785329143 | true | | null | 0.24416744446199234 | OOKIRSCDIVMKWMUBVINKPGRFPAXZAQCYNCFHHGTIVJGFPETBDVJSQBAQBCZIHQFIGJUIQDVGBKHI |
59 26566 | C | T | E | null | 675825180 | true | X | null | 0.4931563909493777 | QTGULKMUEBFERFVNVUBWFASDAKTYBUSRKBLDDWEOFLBRGUYZKDJNGXPPHVJBHDJDCOBKBBYHBFZDGHGIFVID |
60 27404 | C | T | T | null | -635403909 | true | YPFVQNKFDAHZSZPMHFLCLYQVZEKQBOLPHTQ | null | 0.5203201732185717 | EXDSRBZJGXWOWHUPIIIRKVSTHEUQCNVKQSNISLICNKDKOMRLKHNSPEVNUIRNSROCBCLTA |
61 28241 | A | T | Z | null | -1067906708 | true | QZLKAWOOVRGFJQKVJRPQASSROBWVZDJKOCRCYMTXUBTDHUANHSZRCNCFBCWIZCNXGDEIMCPBZSB | null | 0.5796962976262425 | QUKIIAPGADLZGNPSYEUDVAJRCRBBKCGZALLRDVNCSQBWFUIKAVQQYZYNBPVPBWIETRLF |
62 28271 | G | T | A | null | -1835503465 | false | null | null | 0.620329573157975 | JVLKFQHDWSTGPETVKXCXKWHSIMDNCPPXMPDZVJUAG |
63 28638 | A | T | I | null | 513821018 | true | WENLYYCJTPADCDDQOGHMOVVSZJDCDAWFEBOBSMKUXNYIRQCUBYGFSIMFYUAOECXQBGSKUSCEPQAOEVABQVGYCHUOTAEUPCXSMJ | null | 0.013355374167080325 | TQKOCGCXSKCEDPKOLOTGKOBZVLBZNPJ |
64 29017 | G | T | B | null | -1621505252 | true | WCWVCQRXQVDNPNIWYMDJFTUBBMZZFWQYCCSALZJMOLGKLDX | null | 0.4998322634463337 | N |
65 29104 | G | T | null | null | -339319550 | false | XANQSZMAQJJKHDMASERCYWAWEEYUQTEZZDPNUQYPSLZEVRQGBF | null | 0.780453290420614 | MXPFIOFRZAWQCTHQNXHDVM |
66 30014 | A | T | D | null | -572022652 | false | null | null | 0.5988396823217189 | OWDJHCNWEFLHQSSDKFHQVLDLEYBCIQCYAOLFVXWCCSCLZTPSW |
67 30490 | C | T | L | null | -1193426399 | true | PUGHRJDV | null | 0.15722460663127813 | XIXKVQHAMWTPLWPNHKVQVLIAP |
68 30809 | C | T | null | null | 1370291323 | true | GKMWQYUNAVYXZLMSHZQOQAOMXYIBMPQHOMYJBNEODMVEEFBCTJXHBDBI | null | 0.9614556068091539 | D |
69 31450 | G | T | T | null | -100602925 | true | UXCUGFHDUYGCNDAMPRDVDPCCTNNBCPCX | null | 0.8565876795373273 | ADVITTBCUBYQEBQREDVKQVRWCEFSWRGIDIFQAFZ |
70 32094 | G | T | O | null | 483122282 | false | ARMFNR | null | null | SFLJFVUGJEAODATZBRRLBEQPWOKOXKFCDSZTVBKMHRHBLGOAIHYNPLTFNBOQDFQOSGIMGDVIDD |
71 32993 | C | T | P | null | -1784374440 | false | ULBRVHWTPPXLD | null | 0.9767443437342928 | WYRVDDYVZKYHE |
72 33077 | G | T | I | null | -600964577 | false | YMOPBGVKKEECTYFDRMGCEZDPHFWRRBUMUSFMSQDSIHADOFZLPCQVYZEBMKVBMFPHNELKLQQTKDBYWMMMLOMWD | null | 0.2571020272807142 | GLUXIOZZRBJJIUCGRJFDBUXNZCRQNAITMRTBYICFINELWGCHTRZWHGPSJQDOVVDARUZRDFCROZGN |
73 33615 | G | T | Q | null | null | true | ZTIPAXUATFOMJWEUBBMYDPULQZMZEDELHUCDBTWQJJVJXWLRQHRDMENXXUODKYHXTZMYUWDVLMXUWUJVJQOF | null | 0.6377115707798058 | null |
74 34193 | G | T | X | null | 1935647750 | false | SKVEWCKV | null | 0.454310429551415 | QAJLIVJLLIVKIMHNAJEWWRVWIZSGQPVZGJVDJEEACEUAJYIQKIXRLLYWEHVGXFPHAAUD |
75 35108 | C | T | Y | null | -621301019 | null | FXQHIJKMWIEKPDQQBBTBRGBKZFMCMBEVLOGANDMKAZJMHLLIYBKTOJGDTUTFKJQGNEXEKZSZQSANB | null | 0.987225742581265 | UPYHKVOPSCJYNGPAHAHNQKARY |
76 35674 | A | T | E | null | 1240918155 | true | WUVWDOSQMSW | null | 0.3960450868212172 | LNYIAJYPSXDXCZBQOPQMS |
77 35933 | C | T | Y | null | 1963623780 | false | FGCLCZLYWEJMYHNTTSXXCLCCPJRB | null | null | KEDDMQDIIPGHVZBDSZEWNRWSUYVVSOYHJJNHKMNULYYCBUUEXHGUEQLVFIECDHCJEXBPZTNNUGGN |
78 36231 | C | T | H | null | -598651890 | false | null | null | 0.5231217315120074 | MWZEJTKLGQIGRWFRRQPOKVFNLUBIYFBAUNPDVYDOXEKTMBUOBZBKLTJMSURAYR |
79 37137 | C | T | T | null | -560927886 | true | CCUOEWSCGDK | null | 0.9765723991647748 | PSMAIZCPBATXXVHGDQXVT |
80 37895 | C | T | Q | null | 1433331585 | true | YPBSUHNQKRZJLAUPUQUKFCWVILOIQRMKLWKVIMPSQGQQNCWUOOODFXZXMMRLQOTVYZPCMTXLUFJUZPNNKYYWJA | null | null | KNLPUGLUZPEPQWRMMWVETGLEKPBVHLRZZCIVSXZRKBEOERVK |
81 38645 | C | T | A | null | -64922945 | true | ROHWPSYMDCUYXFUMVUZPPYMJWXLTJFYYYLFMIRHTQKHVRPKBIKEQEHHEFPDIISRJLHXNOR | null | 0.10626181009846947 | UBJHULZAQBBRFRJGAZJFYSHSIBGCAUOFFYVSTFHZ |
82 39497 | A | T | D | null | -804208911 | null | OKRPELATYNBXBIXFNZNJOPDWFPVEGBDMNZOFIEP | null | 0.9198539785480527 | null |
83 39573 | C | T | X | null | -659042873 | null | NNVTYOGCLPAAEWFHXXHZSKILO | null | 0.481661024928565 | null |
84 39849 | G | T | B | null | 1854162940 | true | null | null | 0.5584640948881829 | AFLXULPZG |
85 40136 | G | T | O | null | 679572108 | false | YHZSGIQQETOESYPHFJTNZIUKYPRCYFYRJTIMZCUTWALOTKNBHTORFBZWSP | null | 0.6626593894044713 | QUCHQQLSVPYLUIDGCGAOOIWYYNIQHONRKHLCUIXZZIYXHYQTEPKZLFFDEO |
86 41021 | A | T | Q | null | 922545529 | true | ZYMWMCWSN | null | 0.511942583705699 | VQWSKUSZKIYRSHCZHDRLFUL |
87 41279 | G | T | null | null | 768786455 | false | BPMDLKYANUQQSBHHFNJMSBKHRYXQMXNCHRFXSPGAOWMOMIAHSX | null | 0.24633161141195914 | VSZPXVTNOEXWQQVTGTYHRY |
88 41405 | C | T | L | null | 364863895 | true | VSQDYPTSBOHIXPFDYCFBWFIJOYSGWEIOFGIUXBMYTCTJJQZLBEIWXLIDELTXVWYOGYCN | null | 0.40638145332991804 | FQMSSRMHZWJVVUOMBPVLGTNWXGFKDELXIPNUBIQSXJJIMPZRAQRPGGYYEALDQDPRHSPD |
89 42360 | G | T | M | null | -149554186 | true | CWQPBGBNWRLKDJYERMIINDEAFXIIBLWZYU | null | 0.902379120727297 | OELOIZALCSFUBICUYVG |
90 43097 | C | T | H | null | 1619482067 | true | FUCIPJJN | null | 0.4557069798817662 | QZLJFYKYFBXNSVJTLWNHBEU |
91 43250 | G | T | M | null | 1039840912 | false | null | null | 0.43826401782238567 | OETRHFDJWPUVXZZYKIRENGVZILQTXAGJUNMNBZSMODRXZBYFDZCXTCGTGQRTIAPDDYSLBHD |
92 44012 | A | T | S | null | 1153307754 | true | UVXJVCQCBJLYOLUVOCIFUEZZGWQFYSTPSRJHDKBDZEZWMWLJVVMMXUVVGHNV | null | 0.17365479912109194 | LFZWPTVNSBZCISAQEHRFONPWQQXCDPSXOBU |
93 44468 | A | T | F | null | null | true | IBXIWYNWPON | null | 0.7436084607961213 | NQQDVBKIEZBVIVOYKQVRQYCMJAMIHTRDJLBERTXDYQZAPBEVZQOPJLNBCCVLDO |
94 45360 | A | T | O | null | 1583899124 | true | IVXGAVYBXSVREXJZHHTSPHAHLUYTGFNUMWYCYFWSDUVNNDFUBOG | null | null | JFAUVMFOZYU |
95 46156 | C | T | K | null | 1142428620 | true | null | null | 0.2676287457935427 | IUGICLVU |
96 46524 | G | T | Z | null | 1090886060 | false | SJYUSZRTKHCHMKEYIGEGGZUDIMTLCOYYXOYESTZVLXIYHF | null | 0.6704205555944355 | WXONPKQUQOCSOLGKFDASKPM |
97 46865 | G | T | V | null | 1657219698 | false | WQEGYA | null | 0.6009573425303274 | ZKNXGQLGWRORVMYYKPYAMAZCXGYJCALSCGAZOEWAOGVKFIN |
98 47093 | C | T | E | null | 653352657 | true | WUADUERWVVTEILAAAWWEQGIIUKQTGFVSEPVTJSEWOEWXDUVMQMTIHNQPTSFSEQDBHZBNESFTNMMBHTCZRTQJGILVEE | null | 0.08956523678408113 | QTH |
99 47588 | C | T | Z | null | 1873761820 | false | YNJMWKISSQSPVODXUFKNLGZUIAZNNDFNUFAVMYECUHCAZJBYCLWWKTSGVR | null | 0.9680541190017328 | UCFAOCDFSUNIOOVESGTIPFVKUARMUBGZXYUKKFAFXYZOHHJFVMANHSBRDCSOPTTCSZJSNBGPIFIBAHZYTPM |
[INFO] Tests run: 6, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.096 s - in org.snpsift.tests.unit.TestCasesDataFrameSnp
[INFO] Running org.snpsift.tests.unit.TestCasesDataFrameColumnChar
[INFO] Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 2.518 s - in org.snpsift.tests.unit.TestCasesDataFrameColumnChar
[INFO] Running org.snpsift.tests.unit.TestCasesDataFrameMixed
DataFrame: MIXED, size: 100, current index: 100, memory: 63.4 KB
Field types:
##INFO=<ID=field_char,Number=0,Type=Character,Description="">
##INFO=<ID=REF,Number=0,Type=String,Description="">
##INFO=<ID=field_int,Number=0,Type=Integer,Description="">
##INFO=<ID=field_bool,Number=0,Type=Flag,Description="">
##INFO=<ID=field_string_2,Number=0,Type=String,Description="">
##INFO=<ID=ALT,Number=0,Type=String,Description="">
##INFO=<ID=field_float,Number=0,Type=Float,Description="">
##INFO=<ID=field_string,Number=0,Type=String,Description="">
0 130 | GACTC | ATGCTTTTACC | H | null | 1660292060 | true | VGUIHFQWUSYUOXQVRXNTLWTQRTLGZHNXJGLETAEGILYUTDVAIFEOZYGHKA | null | 0.1505474834792303 | FVDPCDVBXJSQCOQZPXBTJGJYGUPJFGVNNNHQUDVOYXEBBPQCNHEHPBPZOQGQUUVRTPOVSQENPLWOJYB |
1 719 | AA | TTTCATAC | D | null | null | false | null | null | 0.2821982861306481 | null |
2 1667 | GGCGTG | ACG | N | null | null | true | KT | null | 0.6610508916166571 | MFMQTLZADZBNDXVFRJHSDKMELBXLUSSYJWTCQVIFLIJUELKBKEYJKNTHRFDXBCCKBLVOSVEUQFWTNZKBFUZYSR |
3 2408 | GCGG | TGA | X | null | -926287273 | false | ETZUFCUBOPMIUMFYLGRXNUESRZQDSAYJBJPSXKJQEUTDCSYARPMLCBJQVLWOVIJFGCPTTGMGCXHAYYLXAIMKCTVQNSDPJFZM | null | 0.6053218598587271 | CTXUKSW |
4 2905 | CAGGA | TGTC | C | null | -2110639781 | false | BKSLLDJGZKGHDVQLAAK | null | 0.0987491349432944 | LUYOJPARNUOSX |
5 3569 | TACATC | GGTTA | Y | null | -1619827948 | true | FDIBMCDIQEETUIGTSZJPBVKGYBSVUHJBXPLIAMKDDP | null | 0.6958254788801048 | HRUNJEPJ |
6 3942 | AGG | GC | E | null | 1759468634 | true | POXVODCKIZGLHJCVWJPDTEPZKMCQAQPJUIKUDWOJEACFAGHAJUAGUXHJXRXWJUZTUYIHWWHCPJPBKFZBMNESHHXQXSIOOTQ | null | 0.31191986699310315 | GKVKARTBDCKYMOCEFUBDVXECTMHEVVOZPUTFMAKDPSHTHARUGHBUTZYQGKG |
7 4309 | GCGT | TGTGGA | B | null | 1001974229 | false | AMFVVWSPTNCGQIEMXRMHTEIGRNSQPPZAOLSBMGEKFBIGQUKJLUZTUDNVRJBQ | null | 0.9430161143370018 | OPXYAVBUFKFXCYZJXGYVI |
8 5266 | CCA | GGCC | G | null | -1921530556 | true | GOWJJGUZZCQWQYUQQTKMUBBNRIJOSKIGWEOJWY | null | 0.4442576436641098 | QAISGEPOGDMTZPNIWMONLAETYPXXUWRHTWRBBIFZWSEEYMAVCOMBUUTBXWQKI |
9 5514 | TAG | CC | R | null | -759679086 | false | HYLGVDHQHETXOLC | null | 0.36492146475814047 | VEUUG |
10 6338 | AG | CTCG | M | null | -536631031 | false | FHKBJCCBTEBDJKRNQUULWPMBXFIJAJIWKOWUC | null | 0.6880295632898734 | SCZBWYYWFGVFTKARFUSEWVKGOKVCBJRCITOZLVPZQXPTCATSLLZVCADPXDFSLLACZQMHEWEYJWJWQVRQ |
11 6556 | GACGG | TCGATA | Y | null | -1809889978 | false | null | null | null | XSRWAOUSCYHUHUBGDWQETIVGKEMLVCL |
12 7530 | GCCTC | TTTA | F | null | 125900821 | false | KFYTNWGKENKRJLZXOPKYMRYUQSVPFUZGDDMXLOBWQRTANIBWUKCXIEUXXTAZJWFGWAAE | null | 0.040427108343605966 | WLITSIBGVBUMVBJWDLZISLBBZZLAFIYNIVADIWAXPTXTVODSUOZTPWRVHQM |
13 7848 | GCTTTT | TGAA | V | null | 552048597 | false | null | null | 0.2229941719444838 | GIC |
14 8230 | GC | ATC | X | null | -1901567179 | false | AITLYHHFQB | null | 0.9281005456025566 | LOBLSKDWFONVIKAEYDXPOHDKZTCWJEGQOFABQPIKEPQYVZJDJKZSAFIAAHSWFGVIBKKGFWKBYZYNSNTPANSIG |
15 9168 | CGGG | GTCCG | U | null | -1414511684 | true | TIMJZ | null | null | PMQNUGIHZTBJTLIFFBHNWHXBLGYGCTRNXIWGFMDRYLLISWKNUEIYXBMRVWHHYV |
16 9658 | ACG | TGCCC | H | null | -192898018 | true | null | null | 0.4896099581558816 | WHCEBYNFJGRCAUIVMXQXRDXKNXIQFMHOCPKFQIYOKFUCMTYDAXAWLEPFSOPHVFZUEFDEJNVDJVDIURYCMIRNPAQXDX |
17 10210 | CTCT | GCT | I | null | -374215497 | false | QABGWIONUOBWHKOXRNGJGVRXGVGFTVBPELFIVQAXUJQEJUMISRBUUMGF | null | 0.16071858764042235 | UUXUBSELUPRBRXWHBLPLKJKWNFXJFPCSFTBCOGQ |
18 10777 | AGAA | CAGCT | O | null | 779853740 | false | RJSFVGSMSRVAWKXGXIITFREYQHUQLXZIVVZTNGEXPPRGWIJFGNMKTZUOIZVXNXQZFDEBETGNMTOBLZLZLRAB | null | 0.792349918144592 | XGNLSSWJIIPEMJKSOVNOHLLTOINNESNDAMNPABXDMDFIN |
19 11693 | ACTGCC | TGAC | null | null | null | false | SFHFDOWTMCRLMYTTAVQCBRJRCXBFMMMEUYDPQEFKJEZLOHQRTHZUBYWZORERPCZFUSOS | null | 0.5577468336431636 | WNYGWXWVNWBBASTFMWIMPLAKWIQLCYASAYTWLRZOEZULNPISAMSOKHMUACOJS |
20 12285 | TGCACA | CA | V | null | null | true | VSDIDIZXMDDAKTUAODSJAAKKPEEFFMCGPCRPYIKDMFUPNFRTNVPWIOXYXT | null | 0.6271643404105325 | null |
21 12310 | ACGTGT | CTTG | Q | null | -1617046473 | true | YHVYMSZDYZLGDMWL | null | 0.9831828393010831 | UUCAKFROSNQESIETCBYNCQKJDXWIHQVGONRRSGZRYORCGVCJXSQSUFGVPCCKOEMOWWQXOBMRHBACQREDBOCPC |
22 13067 | GT | AAAACT | null | null | -1111392265 | null | LPNFFRJWMCUWIXPNTHHZZHADJSGVZPTFTXFBASLXSEJEJNCMXPXKEAEIXRRTZWOV | null | 0.6293056149475463 | TDQXXMYLARYBPGPAPLSOYBUKFPBAFIBSUFQU |
23 13721 | CCTTC | GGC | I | null | -479647117 | true | null | null | 0.975556283988524 | IANCKLACLYINUQMDKFXDIMSWQOFOJHETRGRNTRCEOBDTQWXBHOJWCYZUUUVSTM |
24 14152 | TTCCTC | CCG | P | null | 446527421 | false | IUXDNSLHWUDRUSZUWXBVOU | null | 0.7515769772774136 | null |
25 14934 | GAG | ACCC | L | null | null | false | PVRSRMKLUCGTCFRDYIDIJFXVPQAKHPQEWWNHVSQLOTM | null | 0.5907961912348977 | JNJFGBQRLQGVCFGVOADMYOHSRX |
26 15751 | TA | CCT | J | null | 1599579110 | true | PLGGEVWJSEISSN | null | 0.4264956752414417 | HK |
27 16453 | GGG | CC | Q | null | 167756937 | false | YPWHFHTNZLHHCQDWURHCUCFMYMTWLAEORAANJSPJFRKXQOSMDDYBVPNIPFGNGFXOYMCPAZFZCS | null | 0.07643741004951432 | |
28 16633 | GG | CTCA | H | null | -1598495659 | true | MJNIGBCJUBZXLDNNXPCVBJPSNJTEHOWCPZLVRQWDHOYTRBOKNAZOGGLAHUDGHSLYCNLRITIOBZJSTXAOFYSGHZWIFOJXYYHZGVI | null | 0.37999657635046324 | |
29 17489 | CTG | GACCA | D | null | -1354298566 | true | LCYGTPEMXGDGHWYUWKWRPOEUAAVSFEFMTYW | null | 0.9746654097927338 | PMURZGGYMIELVHMRKLLCGOGZ |
30 17606 | TGTAG | CCACAGAAGC | V | null | 1878366945 | true | TSRSIRDVTNMTRXPBHFNJSKHXWIQWUUWZXQFUVXVAIJYKTFJOCXPZVUPWVJCUHEBBELGXUEAFPGVRPBBCUZUTIRNMBZQIBPCTGQ | null | 0.3397356585960569 | XUCJTEKJBHRBKIFJPGHPQTYOGNZQEAQKWLSYJMMV |
31 18076 | GCT | CTCG | P | null | -1494948578 | false | KXXPVHUIRPUEIYKIREKZGFGBEAADUUMWYHAEHMXFNGJXN | null | 0.7635122604571503 | ZQWDQPYHXAJOITFCVMOPIMPXRLKAIEIOUMPNXSABCPGVHHLJEBZYNSDERCMAIXBNIQRIEMDHOQFQNJQUXLEAMIGIACWWMBNSJU |
32 18957 | TGTG | GT | C | null | 1406916527 | true | FHE | null | 0.3484911209670729 | |
33 19938 | ATCT | TGAAC | O | null | 1149795017 | null | NTKURUNTGXBCRIYGMXGLYBFIHLNCHAUOTOBMXBPTXHXONSYUZUFENSQQWZ | null | null | KRIHEMLGVFOGEXQAHOSMXAJGLFIOEWERSVVSAJWPPTKAZQRFFFVRYSYVBDJNEDJSAMHXJDPHXFJ |
34 20585 | TA | GTCA | G | null | null | false | WOAEHZWLSQJATLMHBLMPH | null | 0.9344242335487438 | GCZOUMEVVTADJIMOLIXKBVOTCBFCXQXRORIHAGVGOEUXJCGASKRFLVS |
35 21560 | GA | TTA | H | null | -205155770 | null | null | null | null | JDWQYQEYTRZGFJYAWMGVKTNMFTZSO |
36 21988 | AA | GGGT | F | null | -1432480630 | true | TILJJSHAQMNRS | null | 0.3133917870266195 | BMIISKYUETNMSZMQMOXJFESSUVIOIQBGIVNRJOMZVWXWMONEKKHMGZCBTCVGNNODWGLUYIKDTOP |
37 22427 | CCCACG | TTGT | E | null | 860447657 | true | LHWZQAMTRPVRWFEGXRZRFDZRKFJOMCLPTTEKBFTTAFFZUAIURYMGGUWLAUKSTJQACGSGRAMCVDIGDQCKOTDGCQOGRHZTC | null | 0.694454522391098 | null |
38 22883 | CGA | TCGTGTTGCA | U | null | -1787101930 | true | YNVOKDHIXALLPU | null | 0.36980056706464903 | DGWDDGQCUCQXBOMEYSHE |
39 23461 | TGTCC | CA | B | null | -1176210216 | false | SRAABIXFMQFNGHXLSOEAJKVRSXRELHZXDYXGCQDQQEEPBAXJKYOLRXTHOYV | null | 0.3517610111383015 | null |
40 23891 | GATC | TCG | K | null | -2118220436 | true | TOZFRCDZWFXPYAZDFJJHTKRYJFYFQLAKZUSSPYAPSWBQETRQQLRESQTQPMY | null | 0.6397097529450779 | XXEALXRGCNLDFIXNZUPCZBSDODUKCOUTKXIRBMYCWNUDNNGDBTLFEYVTQKTOGHTWJCOISHZBCOERGUMYY |
41 24581 | CGG | TTTT | A | null | 426196393 | false | KUOAQXSZYHTFPESQNYFKQEPAP | null | 0.5332729085977445 | IVXNKHDIKCPEZAYOPAVIWWDSBKGVIERZVVKWQMAPZOPDSXSKNPUUTRASSVAQLB |
42 24617 | AGAG | GACCT | null | null | -298680206 | false | COPZCRZCATNTUFFAAFWFFSVSBSJYSHLOFXYBMYZTQXJUFDEFEAIUVTSPDSNVBUBAJUXSDHKHHCKPSLSDCLUO | null | 0.9217536754688332 | UYRRGGGIIANNDJRSSXCAJCOPYYTHKUHLZDKCZJYFXCWGKYB |
43 25109 | AAT | TCAGT | S | null | -1807342243 | true | PKPFZRWZGJGDREVYFYKPCKEHLAWCLGIHAGDZCLUGEUPAZPLXVMDCCMGQOMKTOV | null | 0.028187333666930825 | QHQDIEBEXBHJFIMPPDVZXFSSIZVMSEVENLFRCLOJVRJUUTROOOT |
44 25687 | GA | CGCCCC | R | null | 1025744915 | true | LAZVICTNRXSDTKJBNDZXHKWLUOGGPCVERAXXOAVLQKIFLWJJTKVIJQLBOIDWBLDVMGPQODKOLTDOBNXUKJDP | null | 0.761817576180882 | WOPEORODIVFVMHWOXPGIWSRGLUGVEHLXDQTTSIJFGCAHRXFUYRWJHGVJZCGXHLBHRLBCINDKYLGDK |
45 25708 | TC | GTCTC | null | null | 1837325288 | false | null | null | 0.7695808495019865 | OOINVKQYHMPAUEYVOVQMQOLJLYKIUWLLNINAULGHKESUDFREILZDQ |
46 26557 | CC | GAA | Z | null | 1120279121 | false | LTTAXEEGFQGXLBBHXRCJVLXRLFKYGSTLWRADKLNSWYQIJLEMSYPRLUMZYSMRUPTOFHVRVJGCXKJZJDJCTJBMSKNTNR | null | 0.8524057650440213 | null |
47 27162 | GTAG | TCGTT | Z | null | 52752038 | true | BPZBSVD | null | 0.8135675453387192 | KD |
48 27375 | CAA | ACGTT | O | null | 350350448 | false | null | null | 0.03426922763719786 | JAXEAFQWFNTTHBRNQFDCVJHOASYFSNYLHTKKYEXOXXCVQFFNC |
49 27499 | AAG | TGCAGT | A | null | 23904471 | false | null | null | 0.555524367802816 | NYAYGFBKVSHHTGIFDDJOXULGGPJTGVPOEXCNXBDIORIOEWPXUPJBBEKPQSARFFXUWDNIYWXADIYLUONTQ |
50 27892 | TT | GGAG | Z | null | 980648983 | false | YHWBHIFILQDCHDCFNPVQXTQLDDLRNNWGPVDMZCMWALBHBZSDNPAZQNUZCBTV | null | 0.9356403643683727 | DXIFUGVSFLODMYZHIL |
51 28540 | GCCG | AG | D | null | -1499042282 | false | GPLJGZKGBBUEWZXQRUFHYOHQSASWDVQTYZFJUUCLNKWXYBNO | null | 0.2701407767298879 | null |
52 29421 | GGTC | AAGGGG | H | null | -1649570894 | true | DFFUUTDDXURSPKSC | null | 0.5873439005542106 | URGROVHDGOLLVMWBULF |
53 30224 | TAT | AGGC | O | null | null | false | null | null | 0.07495722896453205 | VEDGKFHPAFTMIKDCKWPZQGZKFCTREWKRHVHNGEOUBUIDIWX |
54 31106 | GCAA | TA | C | null | -130152109 | true | PXLEGILTKJKBPLEWXUAUUEGQTKNBBOPMKWBRCLYRX | null | 0.8287913220463654 | UDXOHXBODYUAKYGAHTLQELXYTJ |
55 31183 | GGA | CA | Z | null | 2067688714 | true | CKZHXRLNAKXKBXLTNWDOSJTUIFRSBDIILLCGQGDPFJVT | null | 0.24977730671660292 | GJOTHKAVFTWIUOIHRTVRUY |
56 31297 | ATTG | TG | R | null | 1742753232 | false | NSIEYGJ | null | 0.7375087780942288 | MUPECSVBKGRQSNGD |
57 31496 | AGGAAT | GT | I | null | 2017697704 | true | FHZBLHXADISRKTIKXYMHTGDHUFIIDBYCTEUXSGVRGHDPVVEJASWCQDXMSCMKQSOUBBBVBJRYNYSLDLERQTAWTAOUNAYMHGN | null | 0.3831208851383727 | EBKTFLFFLUFTSGJBQGYPKJPUATVBRLNYHIUPECZERSOMBIFLOGISAKLNHGVIVMCRZG |
58 32442 | GCCCG | TAAGTT | A | null | -1205957868 | false | EERZXKCHCRVOGQDTZPZQRZIACBFBDNFDLHOOWLPEKVRDEKAKMMIVCNFXLMUOOKIR | null | 0.8878475241886875 | ZCCVYKLUQIIWDFWFESSLYGJQVJSBTUZISTJZGJCDRPCNJCMTEKILBJSYNPCHNBHOVKEEOIDGCIPPPILVEHYJBDBLQWQ |
59 33428 | GG | CCTATG | null | null | 1219143705 | false | NVUBWFASDAKTYBUSRKBLDDWEOFLBRGUYZKDJNGXPP | null | 0.7441218930581249 | HHGTIVJGFPETBDVJSQBAQBCZIHQFIGJUIQDVGBKHIBZWKGGQCSTRTLHEEGLMSAWQTGULKMUEBFE |
60 33855 | AGTTTG | GCG | D | null | -2022598863 | false | SRBZJGXWOWHUPIIIRKVSTHEUQCNVKQSNISLICNKDKOMRLKHNSPEVNUIRNSROCBCLTAXWNYPFV | null | null | DZLRXCLXTZSXTKYSTMBQGGRL |
61 33915 | ACGC | TACGACCGTGT | H | null | -1128367852 | null | TMPMZPSCZTRZLGJ | null | 0.5491902435953122 | null |
62 34483 | TAGC | CGCGAT | null | null | -1557358100 | true | CYMTXUBTDHUANHSZRCNCFBCWIZCNXGDEI | null | 0.31295892252145074 | CGZALLRDVNCSQBWFUIKAVQQYZYNBPVPBWIETRLFHEHQZLKAWOOVRGFJQKVJRPQASSROBWVZDJK |
63 34709 | CCC | AGGA | J | null | -835675181 | true | JCLUBGMVFISLNJIC | null | 0.9602366045493509 | VLKFQHDWSTGPETVKXCXKWHSIMDNCPPXMPDZVJUAGJEZ |
64 35340 | TTC | GGACA | K | null | -166905458 | true | WFEBOBSMKUXNYIRQCUBYGFSIMFYUAOECXQBG | null | 0.8602483882443271 | NPJBGGWENLYYCJTPADCDDQOGHMOVVSZJD |
65 35472 | TGAGGC | GCGAA | E | null | -1631313891 | true | NDQIYDBVMBDDWTLHTNDQJWCWVCQRXQVDNPNIWYMDJFTUBBMZZFWQYCCSALZJMOLGKLDXZXV | null | 0.12363944563302387 | null |
66 35669 | ATTGA | TCCTCA | C | null | -588298380 | false | IQCYAOLFVXWCCSCLZTPSWEZOISZGQEGOAGLBNEVBDRXIXKVQHAMWTPLWPNHKVQVLIAPGDSPUGHRJDVVKHOFAHKHSJBEA | null | 0.8550234837562305 | VMXZWXANQSZMAQJJKHDMASERCYWAWEEYUQTEZZDPNUQYPSLZEVRQGBFWBJNIIFDYZWDSDUABTFOWDJHCNWEFLHQSSDKFHQVLDLE |
67 35728 | GAACCT | CTTT | H | null | -747544882 | null | IDKXPHFOTFRATSTVGMMNADVITTBCUBYQE | null | 0.7490687548616841 | OMXYIBMPQHOMYJBNEODMVEEFBCTJXH |
68 36183 | AC | CATTA | I | null | -1319632117 | false | CTNNBCPCXUCJIDAGHNODZFIQAKSFLJFVUGJEAODATZBRRL | null | 0.4413689991083415 | EUXCUGFHDUYGCNDAMPRDV |
69 36578 | AAAT | GGCAT | R | null | null | false | GDVIDDYSIARMFNRXIDQWTWJFLQPICW | null | 0.43186967699327505 | HYNPLTFNBOQDFQOS |
70 36971 | ACTTG | GG | null | null | 1277958572 | false | DARUZRDFCROZGNNKLYMOPBGVKKEECTYFDRMGCEZDPHFWRRBUMUSFMSQDSIHADOFZLPCQVYZEBMKVBMFPHNELK | null | 0.4453573989044963 | TPPXLDCEUJVNDMTNWIVWAUWXGGLUXIOZZRBJJIUCGRJFDBUXNZCRQNAITMRTBYICFINELWGCHTRZWHGPSJQD |
71 37618 | TTAG | CAG | B | null | 1037393841 | false | BHWYXRNQZTIPAXUATFOMJWEUBBMYDPULQZMZEDELHUCDB | null | 0.39609232226749236 | null |
72 38201 | TAC | ACGTC | D | null | -2079477320 | false | ZGJVDJEEACE | null | 0.07742081110010546 | YUWDVLMXUWUJVJQOFOLKCFROKHUCXYBSBMVOQAJLIVJLLIVKIMHNAJEWWRVWIZSG |
73 38493 | GCCTG | CAGA | H | null | -1463798583 | null | KVEWCKVJHOOKWRVKHVYQCQKXUPYHKVOPSCJYNGPAHAHNQKARYGFZFXQHIJKMWIEKPDQQBBTBRG | null | 0.9277467500723097 | |
74 38540 | GGA | TATT | J | null | -1689361592 | true | IUHOZCYODCFABSKEDDMQDIIPGHVZBDSZEWNRWSUYVVSOYHJJNHKMNULYYCBUUEXHGUEQLV | null | 0.8092660381674348 | KTOJGDTUTFKJQGNEXEKZSZQSANBMVAXRABRZWJEAEABTMFLNYIAJYPSXDXCZBQOPQMSFJNWUVWDOSQMSW |
75 39183 | AG | CTTTG | R | null | -1961645317 | false | UHAVSYGXMMWZ | null | 0.7538616470122224 | LYWEJMYHNTTSXXCLCCPJRBGGEOPFR |
76 39799 | GT | AAT | null | null | -110423199 | false | TENBRRGHPSMAIZCPBATXXVHGDQXVTUTLCCUOEWSCGDKYTEGYYTNJQB | null | 0.12046287233320274 | IYFBAUNPDVYDOXEKTMBUOBZBKLTJMSURAYRXBCQMBFCCJ |
77 40229 | TTGTTT | CCAA | V | null | 1431130355 | false | KLWKVIMPSQGQQNCWUOOODFXZXMMRLQOTVYZPCMTXLUFJUZPNNKYYWJASSEOOTVOMHEQALCBNSOIUBJHULZAQBBRFRJGAZJ | null | 0.7558427773660447 | BVHLRZZCIVSXZRKBEOERVKNQMYPBSUHNQKRZJLAUPUQUKFCWVILOI |
78 40732 | CTCC | AATGT | G | null | 587644912 | true | LHXNORWCADYZZKOKNDIJQWVENOKRPELATYNBXBIXFNZNJOPDWFPVEGBDMNZOFIEPCPEAN | null | 0.4224823862977449 | MDCUYXFUMVUZPPYMJWXLTJFYYYLFMIRHTQKHVRPKBIKEQEHHEFPDII |
79 41491 | CACA | ACTGCTTCG | H | null | -554956194 | false | OLXJAFLXULPZGOHHPVYKONTTVCOQ | null | 0.5208315202141268 | LOGWYTQNLEWXWB |
80 41770 | AAAT | CTGATTAGAC | W | null | -985447616 | true | ORFBZWSPFYBDENAEMVIQZBDVRTNVQWSKU | null | 0.7821972190790509 | NRKHLCUIXZZIYXHYQTEPKZLFFDEOMBEYHZSGIQQETOESYPHFJTNZIUKYPRCYFYRJTIMZCUTWALOTKN |
81 42042 | AAGCGC | GT | M | null | -1038527991 | true | MSBKHRYXQMXNCHRFXSPGAOWMOMIAHSXGQAOJVNMALPLDEWAFVWFQMSSRMHZWJVVUOMBPVLGTNWXGFKDELXIPNUBIQSXJJIMPZRA | null | 0.37288256822247545 | TKMXIBTIDOMJAMIHYVSZPXVTNOEXWQQVTGTYHRYIKSBPMDLKYANUQQSBHH |
82 42652 | GTG | AC | P | null | 1557281811 | true | SFUBICUYVGZRUCWQPBGBNWRLKDJYERMIINDEAFXIIBLWZYUZUWYXQZREBEHXQZJGMJQZLJFYKYFBXNSV | null | null | DYPTSBOHIXPFDYCFBWFIJOYSGWEIOFGIUXBMYTCTJJQZLBEIWXLIDELTXVWYOGYCNFDSSXEVDGHUMRBMPSIPOELOIZ |
83 43313 | GAGAA | ATACTTAGAA | R | null | 978785572 | true | null | null | 0.32522709311038844 | ULOETRHFDJWPUVXZZYKIRENGVZILQTXAGJUNMNBZSMODRXZBYFDZCXTCGTGQRTIAP |
84 43685 | TA | CTGA | S | null | 1153307754 | true | UVXJVCQCBJLYOLUVOCIFUEZZGWQFYSTPSRJHDKBDZEZWMWLJVVMMXUVVGHNV | null | 0.17365479912109194 | LFZWPTVNSBZCISAQEHRFONPWQQXCDPSXOBU |
85 44141 | ACG | CGCCATT | I | null | -999066038 | false | QVRQYCMJAMIHTRDJLBERTXDYQZAPBEVZQOPJLNBCCVLDOBFFIBXIWYNWPONALNRDOU | null | 0.8295755949338437 | null |
86 44779 | CTATA | TGGAGT | R | null | null | false | VNNDFUBOGYSZGEJGRUQMKXJIAKLYIUGICLVURGSXFJCAXCGZKZKGXUYPFWXONPKQUQOCSOLG | null | 0.7400197473135066 | YBXSVREXJZHHTSPHAHLUYTGFNUMWYCYFW |
87 45371 | GACTA | CC | K | null | 468567806 | true | RORVMYYKPYAM | null | 0.11273881633613159 | IGEGGZUDIMTLCOYYXOYESTZVLXIYHFLBWVRPVPBOAIVXCWSQVTZKNXGQ |
88 45571 | TAACTC | GCC | F | null | -287500759 | true | WUADUERWVVTEILAAAWWEQGIIUKQTGFVSEPVTJSEWOEWXDUVMQMTIHNQPTSFSEQDBHZBNESFTNMMBHTCZRTQJGILVEE | null | 0.8056508189855021 | EGYAKQZXEGXNLLREPZFWVCTQTH |
89 46066 | GGCAG | AAA | C | null | -493586842 | true | AHZYTPMRBMYNJMWKISSQSPVODXUFKNLGZUIAZNNDFNUFAVMYECUHCAZJBYCLWWKTSGVRHGNDOZBRLYNCQJNXKGT | null | 0.612124337258956 | UNIOOVESGTIPFVKUARMUBGZXYUKKFAFXYZOHHJFVMANHSBRDCSOPTTCSZJSNBGPI |
90 46985 | TAG | CTTA | W | null | 351786237 | null | XUNGJITKBVEEPVVKXCSIXIBPDCIIEIJGPIYRYOKKJGWQFGMJFLHZAHXAQFYBZVVK | null | 0.27826706664560996 | AMVZAAQHDHBHFFAYFMRFB |
91 47081 | TACCC | AGAG | E | null | -36353828 | true | KKJO | null | 0.0291007292139015 | TKZUZKDQYKPUXKEQCQLIRLCADJZBWMMOMXRGCZSQWBRYGDGRIKAMQVKJOHLFKMJVLVPEWS |
92 47907 | ATTCA | TCC | A | null | 613424168 | false | FSUXWPAZCGDEZLOURIYYLWILVSASNXJPRPTZJUVXIXGKFSRYQHMBXLWGDWVBAGMP | null | 0.2190837769941144 | YSMVTAGLUX |
93 48226 | TAGC | GTATTATCGC | Q | null | 1202745151 | false | HMAZQXNOKCAAFLMKMAPJWDQJCYEVSBUBXDQEBUOZRNZMEYWNTPMJUZMHOMCUHBNTWZFLRLFXDZVCSKRHFAOHYQERO | null | 0.3656546516594086 | HTLNYRRGIOERSJAEXCVDZTHLXIASSVJIAGBAADWL |
94 48416 | GA | ATTC | B | null | -1923088956 | false | NYURKLHJCGPENFCMKHHRQKKZSZXYRELEZOLEJK | null | 0.8751078883243962 | YOQUBORWBWITTSCTVWERUBUYFRQAZEOOVZJFXKRBSPXSRJHJMNUZVVGBGRNLCTBUBYREHOBNQZAXRCSAFUCKBVTXSFZIRE |
95 49291 | TCCT | GGG | B | null | null | false | ERXDZFDWPGMMPWASXLFEMMHIIRGLTWABTAHO | null | 0.7202708244462117 | DOUIHQBODOZVZMZKNJIVKSVNASIVINPVYVOOFJZLLPJAFKPFDVHROQPHOPRLLGYJFDTJWMSIQXMEWEAZFGHCI |
96 49771 | TGGT | CAC | P | null | -1705231585 | false | OXWUWWVTQCERGGEXGBKDKARWVUJORUWGNVSSQWFYCDFHHPEE | null | 0.03359993949940343 | null |
97 50142 | TTCTA | GAAA | R | null | 789177677 | true | null | null | 0.42057612519588505 | NLPWODAVFQLYFWYGSXOQWBSZMNVAMWWRCTCJDBQOFZHSTNZAUQLGKFGNIUNTJWMMJQHSKQBSLLSGOWIMIRRBIEZVEAOMGJ |
98 50305 | GGA | AAGG | G | null | -1078219233 | null | LOOZKHCWJZYEZKSPMSDXYJXODFUCNQJPJJQLSMLNNQFYIWKZIBFJARVKVELGNMJBSLVSOJJPATNF | null | 0.7680804977882877 | null |
99 50789 | CTCC | TGATA | N | null | -1627198920 | false | JAJASVDEOFQ | null | 0.5578843763975981 | GYRGQQXTQSITYGVHCIJQYUMGDLDKITYVVNHWOBSZWJLXTOEH |
[INFO] Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.012 s - in org.snpsift.tests.unit.TestCasesDataFrameMixed
[INFO] Running org.snpsift.tests.unit.TestCasesExtractFields
TestCasesExtractFields.test_31_ann(291): Test
TestCasesExtractFields.test_00(71): Test
TestCasesExtractFields.test_01(98): Test
TestCasesExtractFields.test_02(104): Test
TestCasesExtractFields.test_03(110): Test
TestCasesExtractFields.test_04(116): Test
TestCasesExtractFields.test_05(122): Test
TestCasesExtractFields.test_06(128): Test
TestCasesExtractFields.test_07(134): Test
TestCasesExtractFields.test_08(140): Test
TestCasesExtractFields.test_09(146): Test
TestCasesExtractFields.test_10(152): Test
TestCasesExtractFields.test_11(158): Test
TestCasesExtractFields.test_12(164): Test
TestCasesExtractFields.test_13(170): Test
TestCasesExtractFields.test_14(176): Test
TestCasesExtractFields.test_15(182): Test
TestCasesExtractFields.test_16(188): Test
TestCasesExtractFields.test_17(194): Test
TestCasesExtractFields.test_18(200): Test
TestCasesExtractFields.test_19(206): Test
TestCasesExtractFields.test_20(212): Test
TestCasesExtractFields.test_23(218): Test
TestCasesExtractFields.test_24(224): Test
TestCasesExtractFields.test_25(230): Test
TestCasesExtractFields.test_26(236): Test
TestCasesExtractFields.test_27(242): Test
TestCasesExtractFields.test_28(253): Test
TestCasesExtractFields.test_29(262): Test
TestCasesExtractFields.test_30(273): Test
TestCasesExtractFields.test_31(282): Test
TestCasesExtractFields.test_32(300): Test
TestCasesExtractFields.test_33(312): Test
TestCasesExtractFields.test_34(323): Test
TestCasesExtractFields.test_35(340): Test
[INFO] Tests run: 35, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.348 s - in org.snpsift.tests.unit.TestCasesExtractFields
[INFO] Running org.snpsift.tests.unit.TestCasesGeneSets
TestCasesGeneSets.test_01(25): Test
[INFO] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.123 s - in org.snpsift.tests.unit.TestCasesGeneSets
[INFO] Running org.snpsift.tests.unit.TestCasesGt
TestCasesGt.test_01(25): Test
[INFO] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.227 s - in org.snpsift.tests.unit.TestCasesGt
[INFO] Running org.snpsift.tests.unit.TestCasesDataFrameColumnFloat
[INFO] Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 4.851 s - in org.snpsift.tests.unit.TestCasesDataFrameColumnFloat
[INFO] Running org.snpsift.tests.unit.TestCasesDataFrameColumnInt
[INFO] Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 3.961 s - in org.snpsift.tests.unit.TestCasesDataFrameColumnInt
[INFO] Running org.snpsift.tests.unit.TestCasesHwe
[INFO] Tests run: 6, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.028 s - in org.snpsift.tests.unit.TestCasesHwe
[INFO] Running org.snpsift.tests.unit.TestCasesPosIndex
[INFO] Tests run: 6, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.006 s - in org.snpsift.tests.unit.TestCasesPosIndex
[INFO] Running org.snpsift.tests.unit.TestCasesDataFrameDel
DataFrame: DEL, size: 100, current index: 100, memory: 63.4 KB
Field types:
##INFO=<ID=field_char,Number=0,Type=Character,Description="">
##INFO=<ID=REF,Number=0,Type=String,Description="">
##INFO=<ID=field_int,Number=0,Type=Integer,Description="">
##INFO=<ID=field_bool,Number=0,Type=Flag,Description="">
##INFO=<ID=field_string_2,Number=0,Type=String,Description="">
##INFO=<ID=ALT,Number=0,Type=String,Description="">
##INFO=<ID=field_float,Number=0,Type=Float,Description="">
##INFO=<ID=field_string,Number=0,Type=String,Description="">
0 130 | GACT | | G | null | -1436456258 | true | ZVMGTYMKSHHVG | null | null | |
1 223 | CTGG | | X | null | null | false | NNHQUDVOYXEBBPQCNHEHPBPZOQGQUUVRTPOVSQENPLWOJYBWQKVGU | null | null | PXBTJGJYGUPJF |
2 545 | GTCG | | null | null | -1976073951 | false | QTLZADZBNDXVFRJHSDKMELBXLUSSYJ | null | 0.6940557826497827 | TLGZHNXJGLETAEGILYUTDVAIFEOZYGHKARCZKVIZSFEDWAATTXBGTQUYDTQDGOYRSCIDNLNPVZTXTZUNERDJENKLHKXYE |
3 1055 | AATGG | | E | null | -1010079021 | true | BOPMIUMFYLGRXNUESRZQDSAYJBJPSXKJQEUTDCSYARPMLCBJQVLWOVIJFGCPTTGMGC | null | 0.8502834502384514 | FDXBCCKBLVOSVEUQFWTNZKBFUZYSRXCKKTJLEUVPLGVIJEDMQLNYMXTSWVOERCTXUKSWFGOETZU |
4 1446 | C | | T | null | 1403132403 | true | AUODCZNFMRXEWAMVAFWWRYGGOTPRSHRUNJEPJICSFDIBMCDIQEETUIGTSZJPBVKGYBSVUHJBXP | null | 0.39316353033715945 | FZMDVOZIAHTCCKYPNKJELMEJCCCBAXESFLUYOJPARNUOSXOMPBKSLLDJGZKGHDVQLAA |
5 1881 | TTGA | | T | null | null | false | TEPZKMCQAQPJUIKUDWOJEACFAGHAJUAGUXHJXRXWJUZTUYIHWWHCPJPBKFZBMNESHHXQXSIOOTQBYAMZRFKJCJOARSXBEQN | null | 0.13527063443116194 | RNHENWGVSRDGKVKARTBDCKYMOCEFUBDVXECTMHEVVOZPUTFMAKDPSHTHARUGHBUTZYQGKGJWBPOXVODCKIZGLHJCVW |
6 2563 | T | | T | null | null | false | UKJLUZTUDNVRJBQVPCOIEJRXLFNYGZGASEUGGPSBVAVQAISGEPOGDMTZPNIWMONL | null | 0.6240261637520885 | UFKFXCYZJXGYVICKOAMFVVWSPTNCGQIEMXRMHTEIGRNSQPPZAOLSBMGEKFB |
7 2947 | AAA | | B | null | 114930024 | false | FKUXNMTUYJPZYRUZCWFGZVEUUGMRBHYLGVDHQHETXOLCK | null | 0.07793307836710994 | EYMAVCOMBUUTBXWQKICCOGOWJJGUZZCQWQYUQQTKMUBBNRIJOSKIGWEOJWYMVU |
8 3347 | GTCT | | F | null | 845126422 | false | HEWEYJWJWQVRQKHZFHKBJCCBTEBDJKRNQUULWPMBXFIJ | null | 0.6161471556789055 | DASCZBWYYWFGVFTKARFUSEWVKGOKVCBJRCITOZLVPZQXPTCATSLLZVCADPXDFSLLAC |
9 3983 | CTTCA | | Q | null | 468178437 | false | WQETIVGKEMLVCLMYKFYMDAGCGBDIDZEEHKQQHTZFSFVYKAZIZWLITSIBGVBUMVBJWDLZISLBBZZLAFIYNIV | null | 0.04108960045004717 | ZLCDFWYENCGBPHXSRWAOUSCYHUHU |
10 4433 | GTAT | | O | null | 1130020054 | true | RYUQSVPFUZGDDMXLOBWQRTANIBWUKCXIEUXXTAZJWFGWAAEQHSMCZYQXQMRPTPFNAEJFNLPAVTXNBSMPGICZ | null | 0.6382849215814441 | QMFXCKFYTNWGKENKRJLZXOP |
11 4689 | TGC | | K | null | -445790332 | false | KBYZYNSNTPANSIGHYIAITLYHHFQBGATATIARJNANENEUPMRUWTMUTOOPMQNU | null | 0.7382253789492977 | MJIBLOBLSKDWFONVIKAEYDXPOHDKZTCWJEGQOFABQPIKEPQYVZJDJKZSAFIAAHSWFGVIBKK |
12 5001 | GGG | | B | null | -1313067818 | true | RREBLEBHRQZRGEYWHCEBYNFJGRCAUIVMXQXRDXKNXIQFM | null | null | GYGCTRNXIWGFMDRYLLISWKNUEIYXBMRVWHHYVCLDTIMJZUEMQPCYGQY |
13 5198 | GGGTA | | Y | null | -1251908859 | false | SMSHLSHBDGHYGPIRBDKXCPUUXUBSELUPRBRXWHBLPLKJKWNFXJFPCSFT | null | 0.9167833442482675 | PFSOPHVFZUEFDEJNVDJVDIURYCMIRNPAQXDXXUOX |
14 6041 | AT | | I | null | -6330919 | true | XGVGFTVBPELFIVQAXUJQEJUMISRBUUMGFVSGRPTSDYQCNFNNIKYQTFEOEHQDCMXXGNLSSWJIIPEMJKSOVNOHLLTOINN | null | 0.3800326067140799 | KOXRNGJ |
15 6581 | GGGG | | F | null | null | false | EDKUZSKCFJZPOWKBQYRYSGVHXBWNYGWXWV | null | 0.06012241070042468 | SFVGSMSRVAWKXGXIITFREYQHUQLXZIVVZTNGEXPPRGWIJFGNMKTZUOIZVXNXQZFDEBETGNMTOBLZLZLRA |
16 6936 | TTA | | A | null | 511856758 | false | YTWLRZOEZULNPISA | null | 0.896994305092103 | |
17 7804 | GAACG | | F | null | -1272606888 | true | USOSSEKKLYORBIPYRJUDBIDCVFQZTUNWCGVSDIDIZXMDDAKTUAODSJAAKKPEEFFMC | null | 0.7560910517289061 | CRLMYTTAVQCBRJRCXBFMMMEUYDPQEFKJEZLOHQRTHZUBYWZORERP |
18 8572 | TGG | | null | null | null | true | SNQESIETCBYNCQKJDXWIHQVGONRRSGZRYORCGVCJXSQS | null | null | VPWIOXYXTHTYNYBDMMZVHXXWSJZQXNQOQTVATSQRUUCAK |
19 8788 | AACGT | | O | null | 74880996 | false | MWLBJJADJNZBAVOBMTNXMJZATPEZATDQXXMYLARYBPGPAPLSOYBUKFPBAFIBSUFQU | null | 0.07910641251928785 | QREDBOCPCAQQYHVYMSZDYZ |
20 9670 | TC | | U | null | -1276786925 | true | QO | null | 0.6263524583490568 | HZZHADJSGVZPTFTXFBASLXSEJEJNCMXPXKEAEIXRRTZWOVCTBZXSFZEKHHLXZIXJKJIXDPIKBKIANCKLACLYINUQMDKFXDI |
21 9827 | G | | R | null | null | true | TMUPXGOVUIDXQKLPRET | null | 0.018681289917958255 | WXBHOJWCYZUUUVSTMVQTOL |
22 10693 | AC | | L | null | null | false | GVCFGVOADMYOHSRXWUDPVRSRMKLUCGTCFRDYIDIJFXVP | null | 0.6111167283426931 | ZUWXBVOUOUYTQUNPJDEXQEXRAAQDWLXMONCLSJNJFGBQ |
23 11663 | C | | S | null | -31088424 | true | VWJSEISSNATDXNUGEPQVNYFYDKVSQXWTECOSPWSYPWHFHTNZLHHCQDWURHCUCFMYMTWLAEORAANJSPJFRKXQOSMDDYBVPN | null | 0.7531929524822482 | VRAGOTTXTCDDIXWJJSJYHEWHKXIGPL |
24 12601 | GGCC | | Z | null | null | false | XPCVBJPSNJTEHOWCPZLVRQWDHOY | null | 0.31339935880017655 | YJGTFPZIVULMYLCDHDSTUTUSRRDMJNIGBCJUBZXL |
25 13072 | AAC | | U | null | 1330843747 | true | GYMIELVHMRKLLCGOGZFFHLCYGTPEMXGDGHWYUWKWRPOEUAAVSFEFMTYWHFBGMHHFEMYPISXCFPBUDSQGLOBMZVVFLNSWMQXUCJ | null | 0.4692113581027457 | NLRITIOBZJSTXAOFYSGHZWIFOJXYYHZGVIWJFFVQXUOBTPVATCWTSSEDAGAQRDSPMU |
26 13867 | GCC | | G | null | null | false | XP | null | 0.22199844675396851 | NZQEAQKWLSYJMMVQSQTSRSIRDVTNMTRXPBHFNJSKHXWIQWUUWZXQFUVXVAIJYKTF |
27 13962 | GAG | | L | null | 146571832 | null | MOPIMPXRLKAIE | null | 0.510346538643695 | FPGVRPBBCUZUTIRNMBZQIBPCTGQWJECWFMMFFDRVQJWARQPOLYAIVYZQWDQPYHXAJOIT |
28 14288 | GTC | | H | null | 1548333524 | false | UXLEAMIGIACWWMBNSJUJALKXXPVHUIRPUEIYKIREKZGFGBEAADUUMWYHAEHMXFNGJXNTYDVSJEYOUPPNBVRPSISCUD | null | 0.07446599626789219 | NSDERCMAIXBNIQRIEMDHOQFQ |
29 14851 | CC | | null | null | -1696167297 | null | HXJDPHXFJUVINTKURUNTGXBCRIYGMXGLYBFIHLNCHA | null | 0.0799845503474157 | WIMEDVXAMQMWWROUPEHPKRIHEMLGVFOGEXQAHOSMXAJGLFIOEWERSVVSAJWPPTKAZQRFFFVRYSYVBDJNEDJ |
30 14999 | TGTTC | | Y | null | -522360497 | false | TLMHBLMPHXLKKCJCRPRWZMRUHRDHRWTPNJDWQYQEYTRZGFJYAWMGVKTNMFTZSOSWWVMRPXNYNXLQTNZOAMMXFPMGJWHVBMIISK | null | 0.5344552293903443 | QQWZBPWGGGPCOYIRUODLHHZGLMBQAJLGCZOUMEVVTADJIMOLIXKBVOTCBFCXQXRORIHAGVGOEUXJCGASKRFLVSUERWOAEHZWLS |
31 15537 | GACGA | | S | null | -578434703 | false | OMZVWXWMONE | null | 0.8251475537214046 | BGIV |
32 15731 | ATAC | | null | null | 400671947 | null | HTILJJSHAQMNRSPVOKGXZIMBNHOHFIONKJDLERDGTFZPBBLHWZQAMTRPVRWF | null | 0.5579494955102167 | YIKDTO |
33 15777 | GCT | | M | null | -319681430 | false | DSDLDEGQHTUUHBYSKXKDGWDDGQCUCQXBOMEYSHEELIYNVOKDHIXALLPUSAKUWJOTDSNJKSFBXNRJBTUVDIAXJ | null | 0.3831246943809442 | BFTTAFFZUAIURYMGGUWLAUKSTJQACGSGRAMCVDIGDQCKOTDGCQOGRHZTCYBZORDEBIMVHW |
34 16236 | AACCC | | L | null | -1117096939 | true | COUTKXIRBMYCWNUDNNGDBTLFEYVTQKTOGHTWJCOISHZBCOERGUMY | null | 0.17249805940518959 | RSXRELHZXDYXGCQDQQEEPBAXJKYOLRXTHOYVQIXLQNZJEFFEIOQAEKWYKMIVESHZXXEALXRGCNLDFIXNZUPCZBSDO |
35 16372 | C | | W | null | 1179462312 | true | EZAYOPAVIWWDSBKGVIERZVVKW | null | 0.985450039923121 | FJJHTKRYJFYFQLAKZUSSPYAPSWBQETRQQLRESQTQPMYWUYTHQCHTPHGWMYYPIWPAHZMSNEIIVXNKHDI |
36 17216 | G | | N | null | -1055384584 | true | PSQQOQTKLV | null | 0.06566831133672113 | SVAQLBASZKUOAQXSZYHTFPESQNYFKQ |
37 17785 | ACGCT | | null | null | -298680206 | false | COPZCRZCATNTUFFAAFWFFSVSBSJYSHLOFXYBMYZTQXJUFDEFEAIUVTSPDSNVBUBAJUXSDHKHHCKPSLSDCLUO | null | 0.9217536754688332 | UYRRGGGIIANNDJRSSXCAJCOPYYTHKUHLZDKCZJYFXCWGKYB |
38 18277 | AA | | I | null | -863116862 | true | null | null | 0.5623763340669743 | JDTKELPQHQDIEBEXBHJFIMPP |
39 18468 | AT | | N | null | 1924436227 | true | WCLGIHAGDZCLUGEUPAZPLXVMDCCMGQOMKTOVGLRHFHNQ | null | 0.1749105387303984 | VRJUUTROOOTNOWPKPFZRWZGJGDREVYFYKPCKE |
40 18910 | CCCCG | | Q | null | -2031335518 | false | LAZVICTNRXSDTKJBNDZXHKWLUOGGPCVERAXXOAVLQKIFLWJJTKVIJQLBOIDWBLDVMGPQODKOLTDOBNXUKJDP | null | 0.11273244680001182 | OPEORODIVFVMHWOXPGIWSRGLUGVEHLXDQTTSIJFGCAHRXFUYRWJHGVJZCGXHLBHRLBCINDKYLGDK |
41 18931 | T | | W | null | 1899206506 | false | VGKGUNPFZAZQHYKIPFDMLTTAXEEGFQ | null | 0.4671423995923216 | RUGBQXLOOINVKQYHMPAUEYVOVQMQOLJLYKIUWLLNINAULGHKESUDFREILZDQYXXHJCL |
42 19089 | CC | | R | null | 1118819099 | false | DQYRBPZBSVDVUVMAOYDMVWKCQOPWFYZOOPPWEJLJAXEAFQWFNTTHBRNQFDCVJHOASYFSNYLHTKKYEXOXXC | null | 0.4478386559636307 | LWRADKLNSWYQIJLEMSYPRLUMZYSMRUPTOFHVRVJGCXKJZJDJCTJBMSKNTNRRWSWPOQJYEQWTHBQXHRKWBEPZCHIAW |
43 19894 | CCCTA | | N | null | -605014644 | false | null | null | 0.7303047459316435 | BPOTDAUKOTRZLNYAYGFBKVSHHTGIFDDJOXULGGPJTGVPOEXCNXBDIORIOEWPXUPJBBEKPQSARFFXUWDNIYWXAD |
44 20045 | ACGA | | C | null | null | false | WALBHBZSDNPAZQNUZCBTVECALPBVRYGCTNGWNEHDQFNZRIJLEGPLJGZK | null | 0.8179955180515363 | INSSHZSFLFTPMDXIFUGVSFLODMYZHILGJSYHWBHIFILQDCHDCFNPVQXTQLDDLRNNWGPVDM |
45 20405 | CCTT | | Y | null | -1514625439 | true | JURGROVHDGOLLVMWBULFCGKDFFUUTDDXURSPKSCNVRUE | null | null | DVQTYZFJUUCLNKWXYBNONXNRMRDSFQOYVQPTTMGBOOHSFO |
46 20912 | GGCA | | O | null | 1616307207 | false | null | null | null | VEDGKFHPAFTMIKDCKWPZQGZKFCTREWKRHVHNGEOUBUIDIWX |
47 21794 | GCA | | T | null | -1227593025 | false | HTLQ | null | 0.2772271069547678 | ARBOCHEUDXOHXBODYUAK |
48 22268 | CGAGT | | T | null | -284068841 | true | AVFTWIUOIHRTVRUYFU | null | 0.31929058625899376 | WXUAUUEGQTKNBBOPMKWBRCLYRXXABQJIXFRTNVCQIBZZQJAARJSGJO |
49 23112 | GAAT | | K | null | null | false | MMUPECSVBKGRQSNGDQGTNSIEYGJHVFJLXUAKKXEYZYIMSZQHIQYVCYDEEBKTFLFFLUFTSGJBQGYPKJPUATVBR | null | null | OSJTUIFRSBDIILLCGQGDPFJVTKNEZBOQHXUGGGGXVAUPORVJZ |
50 24097 | ATAGC | | I | null | -598926481 | true | VEJASWCQDXMSCMKQSOUBBBVBJRYNYSLDLERQTAWTAOUNAYMHGNEWNYWEDDDCHLHPAMMBTCCYEASQAPHIVZCCVYKLU | null | 0.21927388862578912 | KLNHGVIVMCRZGOEXFHZBLHXADISRKTIKXYMHTGDHUFIIDBYCTEUXSGVRGH |
51 25083 | AC | | G | null | -293064464 | false | QDTZPZQRZIACBFBDNFDLHOOWLPEKVRDEKAKMMIVCNFXLMUOOKIRSCDIVMKWMUBVINKPGRFPAXZAQCY | null | 0.747238647577231 | UZISTJZGJCDRPCNJCMTEKILBJSYNPCHNBHOVKEEOIDGCIPPPILVEHYJBDBLQWQTZGEERZXKCHCR |
52 25744 | CG | | E | null | -1360501385 | false | WKGGQCSTRTLHEEGLMSAWQ | null | 0.024172844226171386 | BAQBCZIHQFIGJUIQDVGBKH |
53 26411 | G | | F | null | -1304874868 | false | BLDDWEOFLBRGUYZKDJNGXPPHVJBHDJDCOBKBBYHBFZDGHGIFVIDZLRXCLXTZSXTKYSTMBQGGRL | null | 0.6860774121795407 | ASDAKTYBU |
54 27081 | A | | W | null | -1161853101 | true | ZPSCZTRZLGJQQUKIIAPGADLZGNPSYEUDVAJRCRBBKCGZALLRDVNCSQBWFUIKAVQQYZYNBPVPBWIE | null | 0.21385656542785914 | KVSTHEUQCNVKQSNISLICNKDKOMRLKHNSPEVNUIRNSROCBCLTAXWNYPFVQNKFDAHZSZPMHFLCLYQVZEKQBOLPHTQDLSFTT |
55 27218 | CT | | O | null | -1894851746 | false | NHSZRCNCFBCWIZCNXGDEIMCPBZSBYHGCJJCHZAJAJHIZFPZJVLKFQHDWSTGPETVKXCXKWHSIMDNCPPXMPDZVJU | null | 0.6536096755688723 | KVJRPQASSROBWVZDJKOCRCYMTXUBTD |
56 27282 | AGATT | | F | null | 884228440 | true | OBSMKUXNYIRQCUBYGFSIMFYUAOECXQBGSKUSCEPQAOEVABQVGYCHUOTAEUPCXSM | null | 0.2686316223942542 | NTQKOCGCXSKCEDPKOLOTGKOBZVLBZNPJBGGWENLYYCJTPADCDDQOGHMOVVSZJDCDAW |
57 27641 | GGGGA | | T | null | 1676893454 | true | ZZIIIHFMWTOZMHCMXPF | null | 0.8439224234714445 | WCWVCQRXQVDNPNIWYMDJFTUBBMZZFWQYCCSALZJMOLGKLDX |
58 28077 | CGTG | | D | null | -1203020043 | false | AQJJKHDMASERCYWAWE | null | 0.710936431698637 | NQ |
59 29035 | G | | Q | null | -609488607 | true | DSDUABTFOWDJHCNWEFLH | null | 0.911924838137379 | RQGBFWBJNIIFD |
60 29911 | CT | | L | null | -2089153437 | false | GOAGLBNEVBDRXIXKVQHAMWTPLWPNHKVQVLIAPGDSPUGHRJDVVKHOFAHKHSJBEALCXXDQOQGKMWQYUNAVYXZLMSHZQOQAOMXYIB | null | null | YAOLFVXWCCSCLZTPSWEZOISZ |
61 30667 | CTT | | V | null | -1973450833 | true | null | null | 0.9012258507873285 | XHBDBIDKXPHFOTFRATSTVGMMNADVITT |
62 31223 | AA | | K | null | -1755477375 | false | XKFCDSZTVBKMHRHBLGOAIHYNPLTFNBOQDFQOSGIMGDVIDDYSIARM | null | null | SWRGIDIFQAFZGNEUXCUGFHDUYGCNDAMPRDVDPCCTNNBCPCXUCJIDAGHNODZFIQAKSFLJFVUGJEAODATZBRRLBEQPW |
63 31496 | TG | | Q | null | 1180677504 | false | XNZCRQNAITMRTBYICFINELWGCHTRZWHGPSJQDOVVDARUZRDFCROZGNNKLYMOPBGVKKEECTYFDRMGCEZDPH | null | 0.984760373484259 | PWYRVDDYVZKYHEGNPULBRVHWTPPXLDCEUJVNDMTNWIVWAUWXGGLUXIOZZRBJJIUCGRJF |
64 32187 | ATA | | S | null | -724345447 | true | BMFPHNELKLQQTKDBYWMMMLOMWDKEYBUTFMOPXQHBHWYXRNQZTIPAXUATFOMJWEUBBMYDPULQZMZEDELHU | null | 0.8850906678117744 | LPCQVYZEB |
65 32391 | C | | L | null | -875561924 | true | UODKYHXTZMYUWDVLMXUWUJVJQOFOLKCFROKHUCXYBSBMVOQAJLIVJLL | null | 0.3715021908115971 | |
66 32515 | GTAG | | I | null | -375267285 | false | OKWRVKHVYQCQKXUPYHKVOPSCJY | null | 0.5900730230722597 | GJVDJEEACEUAJYIQKIXRLLYWEHVGXFPHAAUDGWKSKVEWCKV |
67 32590 | G | | Y | null | 1514413576 | true | EVLOGANDMKAZJMHLLIYBKTOJGDTUTFKJQGNEXEKZSZQSANBMVAX | null | 0.7341836835763552 | IJKMWIEKPDQQBBTBRGBKZFM |
68 32667 | G | | T | null | 797572977 | false | PSXDXCZBQOPQMSFJNWUVWDOSQMSWTUMIUHOZCYODCFABSKEDDMQDIIPGHVZBDSZEWNRWSUYVVSOYHJJN | null | 0.5332105043498733 | null |
69 32820 | A | | E | null | -415835914 | false | TNNUGGNQRCFGCLCZLYWEJMYHNTTSXXCLCCPJRBGGEOPFR | null | 0.1335174125223052 | VFIECDHCJEX |
70 33205 | A | | M | null | 520142376 | true | KTMBUOBZBKLTJMSURAYRXBCQMBFCCJLLATENBRRGHPSMAIZCPBATXXVHGDQXVTUTLCCUOEWS | null | 0.43211074741851097 | GQIGRWFRRQPOKVFNLUBIYFBAUNPDVYD |
71 34069 | GGTC | | Q | null | 1433331585 | true | YPBSUHNQKRZJLAUPUQUKFCWVILOIQRMKLWKVIMPSQGQQNCWUOOODFXZXMMRLQOTVYZPCMTXLUFJUZPNNKYYWJA | null | null | KNLPUGLUZPEPQWRMMWVETGLEKPBVHLRZZCIVSXZRKBEOERVK |
72 34819 | CG | | Q | null | -739082506 | true | null | null | null | IUBJHULZAQBBRFRJGAZJFYSHSIBGCAUOFFYVST |
73 34912 | T | | D | null | -1883492175 | true | HXNORWCADYZZKOKNDIJQWVENOKRPELATYNBXBIXFN | null | 0.653882331978058 | VUZPPYMJWXLTJFYYYLFMIRHTQKHVRPKBIKEQEHHEFPDIIS |
74 35777 | TA | | D | null | -502617652 | true | NTTVCOQNLCWSMQUCHQQLSVPYLUIDGCGAOOIWYYNIQHONRK | null | 0.8711203219921168 | PCPEANBDLHYXXFKJMJVZNNVTYOGCLPAAEWFHXXHZSKILOGWYTQNLEWXWBHGEOLXJAFLXULPZGOHHPV |
75 36380 | ATTAC | | T | null | 1571795832 | false | ZC | null | null | DEOMBEYHZSGIQQETOESYPHFJTNZIUKYPRCYFYRJ |
76 36754 | TC | | R | null | 1758196166 | true | TYHRYIKSBPMDLKYANUQQSBHHFNJMSBKHRYXQMXNCHRFXSPGAOWMOMIAHSXGQAOJVNMALPLDEWAFVWF | null | 0.6417540860653896 | YBDENAEMVIQZBDVRTNVQWSKUSZKIYRSHCZHDRLFULNBVZYMWMCWSNATKMXIBTIDOMJAMIHYVSZPXVTNOEXWQQ |
77 37602 | C | | V | null | 298122992 | true | WXGFKDELXIPNUBIQSXJ | null | null | L |
78 38525 | AAGAA | | L | null | -1359626233 | true | ELTXVWYOGYCNFDSSXEVDGHUMRBM | null | 0.40993593188707933 | PDBXOVSQDYPTSBOHIXPFDYCFBWFIJOYSGWEIOFGIUXBMYTCTJJQZLBEIWX |
79 39068 | A | | C | null | 313119412 | null | MIINDEAFXIIBLWZYUZUWYXQZREBEHXQZJGMJQZLJFYKYFBXNS | null | 0.8811611289359326 | CUYVGZRUCWQPBGBNWRLKDJ |
80 39391 | TG | | P | null | 387521435 | true | YHDULOETRHFDJWPUVXZZYKIRENGVZILQTXAGJUNMNBZSMODRXZBYFDZCXTCGTGQRTIAPDDYSLBHDYOEYF | null | null | JNTHMLQTYJURK |
81 39810 | ACA | | C | null | 1317623748 | false | DQXSFUDEHXTGNQQDVBKIEZBVIVOYKQVRQYCMJAMIHTRDJLBERTXDYQZAPBEVZQOPJLNBCCVLDOBFFIBXI | null | 0.027280066900205235 | VNSBZCISAQEHRFONPWQQXCDPSXOBUVDYUVXJVCQCBJLYOLUVOCIFUEZZGWQFYSTPSRJHDKBDZEZWMWLJVVMMXUVVGHNVOZY |
82 40464 | CTA | | U | null | 1991019784 | false | SXFJCAXCGZKZKGXUYPFWXONPKQUQOCSOLGKFDASKPMDBASJYUSZRTKHCHMKEYI | null | 0.5232752681520697 | FSHJFAUVMFOZYUDRXIVXGAVYBXSVREXJZHHTSPHAHLUYTGFNUMWYCYFWSDUVNNDFUBOGYSZGEJGRUQMKXJIAKLYIUGICLV |
83 41358 | G | | O | null | -2110428431 | false | CGAZOEWAOGVKFINKYIWQ | null | 0.03010634590247585 | TZVLXIYHFLBWVRPVPBOAIVXCWSQVTZKNXGQLGWRORVMYYKPYAMAZCXGYJC |
84 41616 | TGCC | | E | null | 653352657 | true | WUADUERWVVTEILAAAWWEQGIIUKQTGFVSEPVTJSEWOEWXDUVMQMTIHNQPTSFSEQDBHZBNESFTNMMBHTCZRTQJGILVEE | null | 0.08956523678408113 | QTH |
85 42111 | GGCA | | C | null | 930835808 | false | CSZJSNBGPIFIBAHZYTPMRBM | null | 0.47953341288935725 | OCDFSUNIOOVESGTIPFVKUARMUBGZXYUKKFAFXYZOHHJFVMANHSBRDCSO |
86 42781 | CGCTC | | U | null | 55021129 | false | SXUNGJITKBVEEPVVKXCSIXIBPDC | null | 0.5073404006748695 | IAZNNDFNUFAVMYECUHCAZJBYCLWWKTSGVRHGNDOZBRLYNCQJNXKGTZFGXFMSSZQVMYCFSVUZWZMVVVAMVZAAQHDHBHFFAYFMRF |
87 43117 | GGC | | J | null | 261156548 | true | IDFWSGDLLYEDQGNLLGTKZUZKDQYKPUXKEQCQLIRLCADJZBWMMOMXRGCZSQWBRYGDGRIKAMQVKJOHLFKMJVLVPEWSAPMKKJO | null | 0.37878537991521044 | FLHZAHXAQFYBZVVKGXESMQRCAXY |
88 43943 | ATTC | | I | null | null | true | LONOYSMVTAGLUXLTSFSUXWPAZCGDEZLOURIYYLWILVSA | null | 0.2964646286340923 | null |
89 44547 | TGGGC | | null | null | null | true | IOTQNACNSNCHTLNYRRGIOERSJAEXCVDZTHLXIASSVJIAGBAADWLGGNHMAZQXNOKCAAFLMKMAPJWDQ | null | 0.457479396913271 | HMBXLWGDWVBAGMPTPSDIRXOPHWHAEEWOYVMXSL |
90 44874 | CTCA | | U | null | null | true | VCSKRHFAOHYQEROWK | null | 0.4893857531586706 | YWNTPMJUZMHOMCUHBNTWZFLRLF |
91 45789 | T | | V | null | null | true | ITTSCTVWERUBUYFRQAZEOOVZJFXKRBSPXSRJHJMNUZVVGBGRNLCTBUBYRE | null | null | PBMUTRLSEYOQUBOR |
92 46656 | GAGC | | K | null | -682714045 | false | NJIVKSVNASIVIN | null | 0.21036323577585736 | IREOPSNYURKLHJCGPENFCMKHHRQKKZSZXYRELEZOLEJKZFBXWMPOBPUCQYYNYRBIIEWXCXDOUIHQBODOZVZ |
93 47481 | G | | J | null | 2004630449 | true | HIIRGLTWABTAHOQZHIYVYWSNZY | null | 0.19726006900984927 | HROQPHOPRLLGYJFDTJWMSIQXMEWEAZFGHCIOHYERXDZFDWPGMMPWASXLF |
94 48439 | C | | N | null | -986666946 | null | ZMKACPDAVPUPUFOKMOHRRYEWXXYNLPWODAVFQLYFWYGSXOQWBSZMNVAMWWRCTCJDBQOFZHSTNZAUQLGKFGNIUNT | null | 0.5498634898012835 | OXWUWWVTQCERGGEXGBKDKARWVUJORUWGNVSSQWFYCDFHHPEE |
95 48708 | CCA | | S | null | -907643995 | false | RQZFIVYJCJCARHWGLTWGVOVBBSKLO | null | 0.8043326769484491 | RBIEZVEAOMG |
96 49276 | TG | | P | null | -2066998677 | null | I | null | 0.7177010134014864 | JXODFUCNQJPJJQLSMLNNQFYI |
97 49401 | CGG | | B | null | -257772742 | true | TNFMNZYQCDRJILYWMZAJHDQZTNWQQYFRYGYRGQQXTQSITYGVHCIJQYUMGDLDKITYVVNHWOBSZWJLXTOEHBWLJAJASVDEOF | null | 0.4607268875015176 | null |
98 49907 | CAC | | P | null | 966658647 | true | KGDJSHWQNTLSEYGZ | null | 0.6885368220839251 | GTPFQOWDDNZNFTEUCOAEOMVYXBUMZTNLV |
99 50128 | CA | | E | null | 128095220 | false | NUJYTDVTSDBWKWGYBDKAHAQERJYIGNHYAUFUMIMLNOFPVQJAFDXGIRWIXOBXA | null | 0.4811475357641687 | ZGKNAOXKXJTBFDIJHRUHLXSCTNALYGQVYKSHPRPBNLLZYRIMNEOBUKWLLZRFRXCBJ |
[INFO] Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.022 s - in org.snpsift.tests.unit.TestCasesDataFrameDel
[INFO] Running org.snpsift.tests.unit.TestCasesDbNsfpDeleteCache
TestCasesDbNsfp.test_01(113): Test
TestCasesDbNsfp.test_02(138): Test
TestCasesDbNsfp.test_03(160): Test
TestCasesDbNsfp.test_04(179): Test
TestCasesDbNsfp.test_05(200): Test
TestCasesDbNsfp.test_06(223): Test
[INFO] Tests run: 11, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 30.589 s - in org.snpsift.tests.unit.TestCasesDbNsfpDeleteCache
[INFO] Running org.snpsift.tests.unit.TestCasesSort
TestCasesSort.test_01(30): Test
[INFO] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0 s - in org.snpsift.tests.unit.TestCasesSort
[INFO] Running org.snpsift.tests.unit.TestCasesVariantDatabase
1 1000 . A T . . ZZZ_FIELD_FLOAT=3.14;ZZZ_FIELD_STRING=Value1;ZZZ_FIELD_FLAG=false;ZZZ_FIELD_INT=123
[ZZZ_FIELD_FLOAT, ZZZ_FIELD_FLAG, ZZZ_FIELD_INT, ZZZ_FIELD_STRING]
[FIELD_FLOAT, FIELD_STRING, FIELD_FLAG, FIELD_INT]
[INFO] Tests run: 9, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.037 s - in org.snpsift.tests.unit.TestCasesVariantDatabase
[INFO] Running org.snpsift.tests.unit.TestCasesVcfCheck
TestCasesVcfCheck.test_01(18): Test
[INFO] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.025 s - in org.snpsift.tests.unit.TestCasesVcfCheck
[INFO] Running org.snpsift.tests.unit.TestCasesFilter
TestCasesFilter.test_57_short_circuit_AND_OR_operators(1724): Test
TestCasesFilter.test_32_ann(988): Test
TestCasesFilter.test_33_ann(1049): Test
TestCasesFilter.test_34_ann(1108): Test
TestCasesFilter.test_35_ann(1167): Test
TestCasesFilter.test_01(40): Test
TestCasesFilter.test_02(64): Test
TestCasesFilter.test_03(86): Test
TestCasesFilter.test_04(110): Test
TestCasesFilter.test_05(134): Test
TestCasesFilter.test_06(158): Test
TestCasesFilter.test_07(182): Test
TestCasesFilter.test_08(208): Test
TestCasesFilter.test_09(236): Test
TestCasesFilter.test_10(258): Test
TestCasesFilter.test_11(281): Test
TestCasesFilter.test_12(303): Test
TestCasesFilter.test_13(326): Test
TestCasesFilter.test_14(348): Test
TestCasesFilter.test_15(381): Test
TestCasesFilter.test_16(407): Test
TestCasesFilter.test_17(435): Test
TestCasesFilter.test_18(459): Test
TestCasesFilter.test_19(483): Test
TestCasesFilter.test_20(507): Test
TestCasesFilter.test_21(532): Test
TestCasesFilter.test_22(559): Test
TestCasesFilter.test_23(615): Test
TestCasesFilter.test_24(642): Test
TestCasesFilter.test_25(669): Test
TestCasesFilter.test_26(697): Test
TestCasesFilter.test_27(748): Test
TestCasesFilter.test_28(846): Test
TestCasesFilter.test_29(875): Test
TestCasesFilter.test_30(903): Test
TestCasesFilter.test_31(932): Test
TestCasesFilter.test_32(960): Test
TestCasesFilter.test_33(1021): Test
TestCasesFilter.test_34(1081): Test
TestCasesFilter.test_35(1140): Test
TestCasesFilter.test_36(1198): Test
TestCasesFilter.test_37(1222): Test
TestCasesFilter.test_38(1247): Test
TestCasesFilter.test_39(1272): Test
TestCasesFilter.test_40(1295): Test
TestCasesFilter.test_41(1320): Test
TestCasesFilter.test_42(1356): Test
TestCasesFilter.test_43(1374): Test
TestCasesFilter.test_44(1392): Test
TestCasesFilter.test_45(1410): Test
TestCasesFilter.test_46(1437): Test
TestCasesFilter.test_47(1448): Test
TestCasesFilter.test_48(1459): Test
TestCasesFilter.test_49(1475): Test
TestCasesFilter.test_50(1494): Test
TestCasesFilter.test_51(1526): Test
TestCasesFilter.test_52(1560): Test
TestCasesFilter.test_53(1583): Test
TestCasesFilter.test_54(1605): Test
TestCasesFilter.test_55(1627): Test
TestCasesFilter.test_22_3(589): Test
TestCasesFilter.test_55_2(1647): Test
TestCasesFilter.test_55_3(1667): Test
TestCasesFilter.test_56_empty_vcf(1687): Test
TestCasesFilter.test_58_rmFilter_info_field(1747): Test
TestCasesFilter.test_27_ann2(812): Test
TestCasesFilter.test_26_ann(721): Test
TestCasesFilter.test_27_ann(778): Test
[INFO] Tests run: 68, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 2.93 s - in org.snpsift.tests.unit.TestCasesFilter
[INFO] Running org.snpsift.tests.unit.TestCasesDataFrameColumnString
DataFrameColumnString.resize(76): Converting column 'Test' to EnumArray. Found 6 enums found. Size before: 44 B, after: 5 B
[INFO] Tests run: 5, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 61.988 s - in org.snpsift.tests.unit.TestCasesDataFrameColumnString
[INFO] Running org.snpsift.tests.unit.TestCasesDataFrameMnp
DataFrame: MNP, size: 100, current index: 100, memory: 63.4 KB
Field types:
##INFO=<ID=field_char,Number=0,Type=Character,Description="">
##INFO=<ID=REF,Number=0,Type=String,Description="">
##INFO=<ID=field_int,Number=0,Type=Integer,Description="">
##INFO=<ID=field_bool,Number=0,Type=Flag,Description="">
##INFO=<ID=field_string_2,Number=0,Type=String,Description="">
##INFO=<ID=ALT,Number=0,Type=String,Description="">
##INFO=<ID=field_float,Number=0,Type=Float,Description="">
##INFO=<ID=field_string,Number=0,Type=String,Description="">
0 130 | GACTC | ATGCT | G | null | -346484495 | false | QZPXBTJGJYGUPJFGVNNNHQUDVOYXEBBPQCNHEHPBPZOQGQUUVRTPOVSQENPL | null | 0.43979982659080874 | VGLPKFFVDPCDVBXJS |
1 800 | CCA | GAT | S | null | 734084664 | false | YGHKARCZKVIZSFEDWAATTXBGTQUYDTQDGOYRSCIDNLNPVZTXTZUNERDJENKLHKXYEMFMQTLZADZBNDXVF | null | 0.6279332754134727 | XNTLWTQRTLGZHNXJGLETAEGILYUTDVAIF |
2 1259 | TC | GT | S | null | null | false | SRXCKKTJLEUVPLGVIJEDMQLNYMXTSWVOERCTXUKSWFGOETZUFCUBOPMIUMFYLGRXNUESRZQDSAYJBJPSXKJQEUTD | null | 0.8556303199441717 | IFLIJUELKBKEYJKNTHRFDXBCCKBLVOSVEUQFWTNZKBF |
3 1947 | AGAAA | GCGTC | F | null | -135854320 | true | HAYYLXAIMKCTVQNSDPJFZMDVOZIAHTCCKYPNKJELMEJCCCBAXESFLUYOJPARNUOSXOMPBKSLLDJGZKGHDVQLAAKWGAU | null | null | |
4 2673 | TC | CG | F | null | -288299077 | true | null | null | 0.7278040889330866 | TPRSHRUNJEPJIC |
5 3562 | AGGTTA | GATAGC | U | null | 162252886 | true | BUTZYQGKGJWBPOXVODCKIZGLHJCVWJPDTEPZKMCQAQPJUIKUDWOJEACFAGHAJ | null | 0.028750514440683772 | AMKDDPVNZURFTUUMHFZGRNHENWGVSRDGKVKARTBDCKYMOCEFUBDVXECTMHEVVOZPUTFMAKDPSHTHAR |
6 4158 | CCTCCC | GAGAAT | B | null | -304213835 | false | MFVVWSPTNCGQIEMXRMHTEIGRNSQPPZAOLSBMGEKFBIGQUKJLUZTU | null | 0.04102447110373153 | SHHXQXSIOOTQBYAMZRFKJCJOARSXBEQNWBEYBTRLLBJTOPXYAVBUFKFXCYZJXGYVIC |
7 4279 | CC | GG | X | null | 256660382 | false | MONLAETYPXXUWRHTWRBBIFZWSEEYMAVCOMBUUTBXWQKICCOGOWJJGUZZCQWQYUQQTKMUBBNRIJOSKIGWEO | null | 0.19109407573087445 | ASEUGGPSBVAVQAISGEPOGDMTZP |
8 4676 | TTCTA | GATCC | R | null | -759679086 | false | HYLGVDHQHETXOLC | null | 0.36492146475814047 | VEUUG |
9 5500 | AG | TC | O | null | -1679979548 | false | QKHZFHKBJCCBTEBDJKRNQUULWPMBXFIJAJIWKOWUCMTSWCUNQIYBBUBAZLCDFWYENCGBPHX | null | 0.8750558587334625 | CDASCZBWYYWFGVFTKARFUSEWVKGOKVCBJRCITOZLVPZQXPTCATSLLZVCADPXDFSLLACZQMHEWEYJWJW |
10 5518 | CAGCA | ACAAT | G | null | -886012130 | false | VHQMFXCKFYTNWGKENKRJLZXOPKYMRYUQSVPFUZGDDMXLOBWQRTANIBWUKCXIEUXXTAZJWFGWAAEQHSMCZYQXQMRPTPFNAEJFNLP | null | 0.9484603601700132 | MYKFYMDAGCGBDIDZEEHKQQHTZFSFVYKAZIZWLITSIBGVBUMVBJWDLZISLBBZZLAFIYNIVADIWAXPTXTVODSUOZT |
11 5728 | ACGC | GTCA | Y | null | -1245654784 | false | IAAHSWFGVIBKKGFWKBYZYNSNTPANSIGHYIAITLYHHFQBGATATIA | null | 0.7194449346355324 | IKEXJRDMJIBLOBLSKDWFONVIKAEYDXPOHDKZTCWJEGQOFABQPIKEPQYVZJDJKZ |
12 6459 | CCG | AGA | null | null | -129760917 | false | BYNFJGRC | null | 0.5882172034343477 | GIHZTBJTLIFFBHNWHXBLGYGCTRNXIWGFMDRYLLISWKNUEIYXBMRVWHHYVCLDTIMJZUEMQPCYGQYRZLRREBLEBHRQZRGEYW |
13 6889 | AGCGC | CCAAG | P | null | 1620772052 | true | null | null | 0.35351188686690904 | FUCMTYDAXAWLEPFSOPHVFZUEFDEJ |
14 7834 | AA | CT | null | null | 335155552 | false | null | null | 0.4086730063619384 | null |
15 8137 | CTAG | TCCT | D | null | 690281034 | true | HBLPLKJKWNFXJFPCSFTBCOGQQMIQABGWIONUOBWHKOXRNGJGVRXGVGFTVBPELFIVQAXUJQEJUMISRBUUMGFVSGRPTSDYQC | null | 0.4844370393511812 | UBSELUPRB |
16 9084 | TT | AA | C | null | 917754666 | false | XDMDFINZHSRJSFVGSMSRVAWKXGXIITFREYQHUQLXZIVVZTNGEXPPRGWIJFGNMKTZUOIZVXNXQZFDEBETGNMTOBLZLZLRABIWE | null | 0.6487816358956248 | SWJIIPEMJKSOVNOHLLTOINNESNDAMN |
17 9409 | GCCT | TGAC | null | null | null | false | SFHFDOWTMCRLMYTTAVQCBRJRCXBFMMMEUYDPQEFKJEZLOHQRTHZUBYWZORERPCZFUSOS | null | 0.5577468336431636 | WNYGWXWVNWBBASTFMWIMPLAKWIQLCYASAYTWLRZOEZULNPISAMSOKHMUACOJS |
18 10001 | TGCACA | ATAGTG | T | null | -1515629276 | null | null | null | null | VSDIDIZXMDDAKTUAODSJAAKKPEEFFMCGPCRPYIKDMFUPNFRTNVPWIOXYXT |
19 10311 | GTGT | ACTG | Q | null | -1617046473 | true | YHVYMSZDYZLGDMWL | null | 0.9831828393010831 | UUCAKFROSNQESIETCBYNCQKJDXWIHQVGONRRSGZRYORCGVCJXSQSUFGVPCCKOEMOWWQXOBMRHBACQREDBOCPC |
20 11068 | GT | CG | N | null | 509578579 | null | UKFPBAFIBSUFQUKPWLPNFFRJWMCUWIXPNTHHZZHADJS | null | 0.7785962769003004 | TPEZATDQXXMYLARYBPGPAPLS |
21 11174 | TGCTCT | AAACTA | P | null | 921144451 | false | WOVCTBZXSFZEKHHLXZIXJKJIXDPIKBKIANCKLACLYINUQMDKFXDIMSWQOFOJHETRGRNTRCEOBDTQWXBHOJWCYZUUU | null | 0.9123421937562539 | R |
22 11571 | CTAG | TCCT | D | null | 1718949627 | false | MYOHSRXWUDPVRSRMKLUCGTCFRDYIDIJFX | null | 0.46673104389165376 | TYPTCCKIUXDNSLHWUDRUSZUWXBVOUOUYTQUNPJDEXQEXRAAQDWLXMONCLSJNJFGBQRLQGVCFGV |
23 12078 | CCCT | TTTC | O | null | -1384192067 | false | NJSPJFRKXQOSMDDYBVPNIPFGNGFXOYMCPAZFZCSMNEYJGTFPZIVULMYLCDHDSTUTUSRRDMJNIGBCJUBZXLDNNXPCVBJPSNJTEH | null | 0.26815358468775163 | XTCDDIXWJJSJYHEWHKXIGPLGGEVWJSEISSNATDXNUGEPQVNYFYDKVSQXWTECOSPWSYPWHFHTNZLHHCQDWURHCUCFMYMTWLAEO |
24 12254 | TCAC | GGTT | null | null | -438374424 | true | null | null | 0.14673592424180915 | AHUDG |
25 12349 | ATCAT | CGGTA | H | null | 758453846 | true | KLLCGOGZFFHLCYGTPEMXGDGHWYUWKWRPOEUAAVSFEFMTYWHFBGMHHFEMYPISXCFPB | null | 0.2292387309942473 | YYHZGVIWJFFVQXUOBTPVATCWTSSEDAGAQRDSPMURZGGYMIELV |
26 13123 | CCC | GAT | X | null | -1001450513 | true | JSK | null | 0.2696122012937159 | BHRBKIFJPGHPQTYOGNZQEAQKWLSYJMMVQSQTSRSIRDVTNMTRXPB |
27 13770 | TGAT | GATG | null | null | 2005789910 | true | PWVJCUHEBBELGXUEAFPGVRPBBCUZUTIRNMBZQIBPCTGQWJECWFMMFFDRVQJWARQPOLYAIVYZQWDQPYHXAJOITFCV | null | null | XP |
28 14344 | ACG | TAT | P | null | 1199993081 | true | FQNJQUXLEAMIGIACWWMBNSJUJALKXXPVHUIRPUEIYKIREKZGFGBEAADUUMWYHA | null | 0.5103393097757357 | GVHHLJEBZYNSDERCMAIXBNIQRIEMD |
29 14756 | TGAC | CTTT | N | null | -1804611253 | false | LGVFOGEXQAHOSMXAJGLFIOEWERSVVSAJWPPTKAZQRFFFVRYSYVBDJNEDJSAMHXJDPHXFJUVINT | null | 0.7827166701418667 | CUDRTBUEEBJFHEBUIHMNHWIMEDVXAMQMWWROUPEHPKRI |
30 15508 | GAAT | CGTG | H | null | 1220755583 | false | MBQAJLGCZOUMEVVTADJIMOLIX | null | 0.5501110077087921 | TOBMXBPTXHXONSYUZUFENSQQWZBPWGGGPCOYIRUODLHH |
31 16240 | AGGAA | CACGG | U | null | 559197251 | true | HBLMPHXLKKCJCRPRWZMRUHRDHRWTPNJDWQYQEYTRZGFJ | null | 0.4097318407654317 | RFLVSUERWOAEHZWLSQJA |
32 16358 | GGTA | CAGT | null | null | null | true | QBGIVNRJOMZVWXWMONEKKHMGZCBTCVGNNODWGLUYIKDTOPVYHTILJJSHAQMNRSPVOKGXZIMBNHOHFIONKJDLERDGTFZPBBLHWZ | null | 0.9780981106199931 | NXLQTNZOAMMXFPMGJWHVBMIISKYUETNMSZMQMOXJFESSUV |
33 16976 | AAACAC | TCCGCT | M | null | -319681430 | false | DSDLDEGQHTUUHBYSKXKDGWDDGQCUCQXBOMEYSHEELIYNVOKDHIXALLPUSAKUWJOTDSNJKSFBXNRJBTUVDIAXJ | null | 0.3831246943809442 | BFTTAFFZUAIURYMGGUWLAUKSTJQACGSGRAMCVDIGDQCKOTDGCQOGRHZTCYBZORDEBIMVHW |
34 17435 | AACCCT | GGTTAA | R | null | -2051070316 | true | LDFIXNZUPCZBSDODUKCOUTKXIRBMYCWNUDNNGDBTLFEYVTQKTOGHTWJ | null | 0.8501062151834663 | XGCQDQQEEPBAXJKYOLRXTHOYVQIXLQNZJEFFEIOQAEKWYKMIVESHZXXEALXR |
35 18205 | AATAT | CCACA | R | null | -1016853906 | false | RQQLRESQTQPMYWUYTHQCHTPHGWMYYPIWPAHZMSNEIIVXNKHDIKCPEZAYOPAVIWWDSBKGVIERZVVKWQM | null | 0.1252305846603955 | YAZDFJJHTKRYJFYFQLAKZUSSPYAPSWB |
36 18671 | CTAA | ACCT | A | null | 312433305 | true | QXSZYHTFPESQNYFKQEPAPSQQOQTKLVFPHTXHKJQVYAMKHLOWPTSYXUYRRGGG | null | 0.7732929039471246 | |
37 18815 | AGGT | TCCC | H | null | -192126094 | true | FDEFEAIUVTSP | null | 0.6687744242493339 | CZJYFXCWGKYBDKQCOPZCRZCATNTUFFAAFWFFSVSBSJYSHLOFXYBMYZTQ |
38 18990 | CCTCC | TTGAG | L | null | 1338557204 | false | KEHLAWCLGIHAGDZCLUGEUPAZPLXVMDCCMGQOMKTOVGLRHFHNQMBPQZMVYTJOPTTGRQOOBAXHWOPEORODIVFVMHWOXPGIWSRG | null | null | ZTXKZAMMIUSGJPTSJDTKELPQHQDIEBEXBHJFIMPPDVZXFSSIZVMSEVENLFRCLOJVRJUUTROOOTNOWPKPFZRWZGJGDREVYFY |
39 19649 | CCTTAT | TTAGGG | R | null | -845218447 | true | AVLQKIFL | null | 0.7741583228840283 | CGXHLBHRLBCINDKYLGDKTYCLAZVICTNRXSDTKJBNDZXHKWLUOGGPCVERA |
40 20607 | GCCAT | TGTCA | K | null | -45025817 | true | YHMPAUEYVOVQMQOLJLYKIUWLLNINAULGHKESUDFREILZDQYXXHJCLAUMVGKGUNPFZAZQHYKIPFDMLTTAXEEGFQGXLBBH | null | 0.9691373737772555 | XUKJDPVJPSOBEOLCFOWQUAECVTRUGBQXLOOIN |
41 21156 | GCCGCA | CGTATG | W | null | -1243561189 | true | SMRUPT | null | 0.4429926847541722 | SYPRLU |
42 21806 | TA | AC | null | null | 1735497575 | false | null | null | 0.0394328659741473 | null |
43 21839 | AG | TA | B | null | -865651518 | true | QFDCVJHOASYFSNYLHTKKYEXOXXCVQFFNCFTYYJLZYMGNTENXHJSBPOTDAUKOTRZLNYAYGFBKVSHHTGIFDDJOXUL | null | 0.5871949292573951 | EPZCHIAWMAKDQYRBPZBSVDVUVMAOYDMVWKCQOPWFYZOOPPWEJLJAXEAFQWFNTTH |
44 22489 | CGATCT | TCGGTC | P | null | 330394861 | false | FFXUWDNIYWXADIYLUONTQMETNMCPYCWDFLSHSINSSHZSF | null | 0.2997445310722515 | |
45 23072 | GTTGGG | CCAAAA | Y | null | -502033321 | true | NUZCBT | null | 0.43276042129899417 | LQDCHDCFNPVQXTQLDDLRNNWGPVDMZCMWALBHBZSDNP |
46 23295 | GGCCG | AAGAC | Z | null | -1518612753 | null | null | null | 0.6671145728647582 | GPLJGZKGBBUEWZXQRUFHYOHQSASWDVQTYZFJUUCLNKWXYBNO |
47 23898 | TCAA | AGGG | O | null | 448265666 | false | GIUWTXHUDCOQYZFPZLVEDGKFHPAFTMIKDCK | null | 0.24165067951893648 | JURGROVHDGOLLVMWBULFCGKDFFUUTDDXURSPKSCNVRUE |
48 24196 | AAGA | CCCT | G | null | 1626222045 | true | UDXOHXBODYUAKYGAHTLQELXYTJ | null | 0.32903298056413266 | IWXCNWIISITBTVMNPAYTHIPNCKCARBO |
49 25181 | GTGG | CGTT | E | null | -1426293938 | true | IUOIHRTVRUYFUACKZH | null | null | GQTKNBBOPMKWBRCLYRXXABQJIXFRTNVCQIBZZQJAARJSGJOTHKAV |
50 25974 | GA | TG | S | null | 1729122195 | null | AUPORVJZTOJMMUPECSVBKGRQSNGDQGTNSIEYGJHVFJLXUAKKXEYZYIMSZQHIQYVCYDEEBKTFLFFLUFTSGJBQGYP | null | 0.20879455011120462 | RSBDIILLCGQGDPFJVTKNEZBOQHXUGGG |
51 26128 | GGAC | CTGA | S | null | -2107939295 | true | GDHUFIIDBYCTEUXSGVRGHDPVVEJASWCQDXMSCMKQSOUBBBVBJRYNYSLDLERQTAWTAOUNAYMHGNEWNYWEDDD | null | 0.3465217480145627 | GISAKLNHGVIVMCRZGOEXFHZBLHXADISRKTIKXY |
52 26948 | GTTC | CGCT | I | null | 874276164 | false | null | null | 0.8700358952315721 | LUQIIWDFWFESSLYGJQVJSBTUZISTJZGJCDRPCNJCMTEKILBJSYNPCHNBHOVKEEOIDGCI |
53 27123 | GAGTTG | TTCGGA | C | null | -1626430403 | false | OOWLPEKVRDEKAKMMIVCNFXLMUOOKIRSCDIVMKWMUBVINKPGRFPAXZAQCYNCFHHGTIVJGFPE | null | 0.4907299787684579 | ZPZQRZIACBFBDNF |
54 27200 | TCCC | AGTG | null | null | 1628916152 | true | DAKTYBUSRKBLDDWEOFLBRGUYZKDJNGXPPHVJBHDJDCOBKBBYHBFZDGHGIFVIDZLRXCLXTZSXTKYSTMBQGGRL | null | 0.20887152037949375 | IBZWKGGQCSTRTLHEEGLMSAWQTGULKMUEBFERFVNVUBW |
55 27870 | AT | CG | P | null | 918507005 | false | NSPEVNUIRNSROCBCLTAXWNYPFVQNKFDAHZSZPMHFL | null | 0.7860384613677455 | THEUQCNVKQSNISLICNKDKOMR |
56 28608 | GTT | AGG | null | null | 1578678272 | true | PVPBWIETRLFHEHQZLKAWOOVRGFJQKVJRPQASSROBWVZDJKOCRCYMTXUBTDHUANHSZRCNCFBCWIZCNXGDEIMCPBZSBYHGC | null | 0.6304197165537765 | MZPSCZTRZLGJQQUKIIAPGADLZGNPSYEUDVAJRCRBBKCGZALLRDVNCSQBWFUIKAVQQYZ |
57 29523 | GGTG | TTCT | F | null | null | false | GCXSKCEDPKOLOTGKOBZVLBZNPJBGGWENLYYCJTPADCDDQOGHMOVVSZJDCD | null | 0.8901803045759502 | PETVKXCXKWHSIMDNCPPXMPDZVJUAGJEZKKCJCLUBGMVFISLNJICNTQ |
58 29759 | CTAC | TGCG | F | null | 1755390814 | true | EUPCXSMJBZ | null | 0.10399455024155924 | OECXQBGSKUSCEPQAOEVABQVGYCHU |
59 30240 | GAGC | CGTA | J | null | 245805235 | false | WQCTHQNXHDVMXZWXANQSZMAQJJKHDMASERCYWAWEEYUQTEZZDPNUQYPSLZEVRQGBFWBJNI | null | 0.4726267810717161 | XQVDNPNIWYMDJFTUBBMZZFWQYCCSALZJMOLGKLDXZXVZZIIIHFMWTOZMHCMXPFIOF |
60 30670 | GTACTT | TAGGGA | S | null | 944514871 | true | CXXDQOQGKMWQYUNAVYXZLMSHZQOQAOMXYIBMPQHOMYJBNEODMVEEFBCTJXH | null | 0.9717077606324023 | LDLEYBCIQCYAOLFVXWCCSCLZTPSWEZOISZGQEGOAGLBNEVBDRXIXKVQHAMWTPLWPNHKVQVLIAPGDSPUGHRJDVVKHOFAHKHSJB |
61 30689 | GCGG | TATA | M | null | -2073219890 | true | CUBYQEBQREDVKQVRWCEFSWRGIDIFQAFZGNEUXCUGFHDUYGCNDAMPRDVDPCCTNNB | null | 0.9472471024440868 | null |
62 30947 | GTC | AAA | I | null | -667972054 | true | JEAODATZBRRLBEQPWOKOXK | null | null | F |
63 31496 | TACC | ACTT | null | null | -1153848742 | false | WXGGLUXIOZZRBJJIUCGRJFDBUXNZCRQNAITMRTBYICFINELWGCHTRZWHGPSJQDOVVDARUZRDFCROZGNNKLYMOPBGVKKE | null | 0.3776459242637572 | BOQDFQOSGIMGDVIDDYSIARMFNRXIDQWTWJFLQPICWLAKPWYRVDDYVZKYHEGNPULBRVHWTPPXLDCEUJVNDMTNWIV |
64 31944 | TCTA | GGCG | B | null | 486774086 | false | PXQHBHWYXRNQZTIPAXUATFOMJWEUBBMYDPULQZ | null | 0.3695467993106807 | QDSIHADOFZLPCQVYZEBMKVBMFPHNELKLQQTKDBYWMMMLOMWDKEYBUT |
65 32434 | GGAAGG | ACCTCT | H | null | 1595589726 | false | IMHNAJEWWRVWIZSGQPVZGJVDJEEACEUAJYIQKIXRLLYWEHVGXFPHAAUDGWKSKVEWCK | null | 0.1196230872144961 | UODKYHXTZMYUWDVLMXUWUJVJQOFOLKCFROKHUCXYBSBMVOQAJLIVJLL |
66 33205 | CG | GT | Q | null | -54864998 | false | MCMBEVLOGANDMKAZJMHLLIYBKTOJGDTUTFKJQGNEXEKZSZQSANB | null | null | HKVOPSCJYNGPAHAHNQKARYGFZFXQHIJKMWIEKPDQQBBTBRGB |
67 33771 | TGCCGC | ACTGAA | J | null | -899793151 | false | XHGUEQLVFIECDHCJEXBPZTNNUGGNQRCFGCLCZLYWEJMYHNTTSXXCLCCPJRBGGEOPFRVIOUHAVSYGXMMWZEJTKL | null | 0.1905641263105804 | ZBQOPQMSFJNWUVWDOSQMSWTUMIUHOZCYODCFABSKEDDMQDIIPGHVZBDSZEWNRWSUYVVSOYHJJNHKMNULYYCB |
68 34741 | TGATT | CAGAG | F | null | -1225579561 | true | CCUOEWSCGDK | null | 0.881650195389698 | YDOXEKTMBUOBZBKLTJMSURAYRXBCQMBFCCJLLATENBRRGHPSMAIZCPBATXXVHGDQXVT |
69 35499 | CT | AG | K | null | -276395645 | false | null | null | 0.977751537018833 | ZPEPQWRMMWVETGLEKPBV |
70 35546 | AT | CG | null | null | 2040100435 | true | ZJLAUPUQUKFCWVILOIQRMKLWKVIMPSQGQQNCWUOOODFXZXMMRLQOTVYZPCMTXLUFJUZPN | null | 0.09037104358084358 | BSUHN |
71 36433 | GGCT | ATGC | C | null | 168413364 | true | null | null | 0.1904413360563667 | JHULZAQBBRFRJGAZJFYSHSIBGCAUOFFYVSTFH |
72 37416 | CG | TC | M | null | 1814030146 | true | DIISR | null | 0.27648269722880425 | JWXLTJFYYYLFMIRHTQKHVRPKBIKEQEHH |
73 38285 | AGC | TTA | D | null | -804208911 | null | OKRPELATYNBXBIXFNZNJOPDWFPVEGBDMNZOFIEP | null | 0.9198539785480527 | null |
74 38361 | GCTGAC | AAACCT | G | null | null | false | SVPYLUIDGCGAOOIWYYNIQHONRKHLCUIXZZIYXHYQTEPKZ | null | 0.9186628435199452 | FHXXHZSKILOGWYTQNLEWXWBHGEOLXJAFLXULPZGOHHPVYKONTTVCOQNLCWSMQUCH |
75 38632 | CCTAGC | TAGGTT | J | null | -1928769563 | false | ZC | null | 0.12015177706912317 | PRCYFYRJ |
76 39006 | TCG | ATC | S | null | -1435537229 | true | VSZPXVTNOEXWQQVTGTYHRY | null | 0.10825272757712423 | AEMVIQZBDVRTNVQWSKUSZKIYRSHCZHDRLFULNBVZYMWMCWSNATKMXIBTIDOMJAM |
77 39326 | CTGG | GCCC | N | null | 1238244676 | false | RPGGYYEALD | null | 0.41559312842378404 | YXQMXNCHRFXSPGAOWMOMIAHSXGQAOJVNMALPLDEWAFVWFQMSSRMHZWJVVUOMBPVLGTNWXGFKDELXIPNUBIQSXJJIMPZ |
78 39616 | AT | GC | P | null | 193791099 | false | YTCT | null | 0.2178404304349859 | PFDYCFBWFIJOYSGWEIOFGIU |
79 40139 | TGTAGT | CAGGTA | F | null | 928401180 | true | null | null | 0.4941678716122485 | GHUMR |
80 40682 | AC | GA | null | null | -510409048 | false | GMJQZLJFYKYFBXNSVJTLWNHBEUMPEFUCIPJJNTHMLQTYJURKMRXYHDULOETRHFDJWPUVXZZYK | null | 0.6826290896912366 | GZRUCWQPBGBNWRLKDJYERMIINDEAFXIIBLWZYUZUWYXQZREBEHX |
81 40844 | GTTTC | CGCCG | M | null | 838024760 | true | UVO | null | 0.5626054761915171 | FDZCXTCGTGQRTIAPDDYSLBHDYOEYFHHKORYXGSGMUZOCDLFZWPTVNSBZCISAQEHRFONPWQQXCDPSXOBUVDYUVXJVCQCBJL |
82 41772 | TT | CG | null | null | -1963423867 | false | ZWMWLJVVMMXUVVGHNVOZYPQRDQXSFUDEHXTGNQQDVBKIEZBVIVOYKQVRQYCM | null | 0.06821448380998862 | null |
83 42405 | GGAGAT | CCGAGA | null | null | 599980869 | true | SVREX | null | 0.557000574778266 | BCCVLDOBFFIBXIWYNWPONALNRDOUUIZOZANCFSHJFAUVMFOZYUDRXIVXGAV |
84 42798 | AAAT | CCTC | W | null | -433896788 | true | NNDFUBOGYSZGEJGRUQMKXJIAKLYIUGICLVURG | null | 0.8086382761333594 | null |
85 43166 | TCCTT | GTGCG | P | null | -212160676 | false | DASKPMDBASJYUSZRTKHCHMKEYIGEGGZUDIMTLCOYYXOYESTZVLXIYHFLBWVRPVPBOAIVXCWSQ | null | 0.4004611468446073 | OL |
86 43893 | TCAA | ATCG | A | null | -1842380129 | true | ALSCGAZOEWAOGVKFINKY | null | 0.6941442078114862 | null |
87 44799 | CTATG | AATGA | C | null | 1518735330 | false | TEGAXQHZZKHNCPGXUCFAOCDFSUNIOOVESGTIPFVKUARMU | null | 0.035089348611912374 | WUADUERWVVTEILAAAWWEQGIIUKQTGFVSEPVTJSEWOEWXDUVMQMTIHNQPTSFSEQDBHZBNESFTNMMBHTCZRTQJGILVEE |
88 44980 | ACACG | GGGGT | A | null | -1094185683 | true | DFNUFAVMYECUHCAZJBYCLWWKTSGVRHGNDOZBRLYNCQJNXKGTZFGXFMSSZQVMYCFSVUZWZMVVVAMVZAAQHDHBHFF | null | 0.39624910302016625 | SOPTTCSZJSNBGPIFIBAHZYTPMRBMYNJMWKISSQSPVODXUFKNLGZUIA |
89 45514 | CTAGGG | GCTATT | C | null | 829369797 | true | FYBZVVKGXESMQRCAXYFQXIDFWSGDLLYEDQGNLLGTKZUZKDQYKPUXKE | null | 0.06802209908917545 | CIIEIJGPIYRYOKKJGWQFGMJFLHZAH |
90 46164 | CTT | TGC | M | null | -814452473 | false | YGDGRIKAMQVKJOHLFKMJVLVPEWSAPMKKJOCHYNCBMNZGHZDQIJCWDWAXBELONOYSMVTAGLUXLTSFSUXWPAZ | null | 0.7938675906527775 | |
91 46724 | TTATGC | GGTAAA | P | null | 1882730814 | true | PTPSDIRXOPHWHAEEWOYVMXSLFZPIOTQNACNSNCHTLNYRRGIOERSJAEXC | null | 0.37844740748624583 | XIXGKFSRYQHMBXLWGDWVB |
92 46735 | GACGC | TCTTG | G | null | 575014296 | false | OMCUHBNTWZFLRLFXDZVCSKRHFAO | null | 0.5133194346909566 | XNOKCAAFLMKMAPJWDQJCYEVSBUBXDQEBUOZRNZMEYWNTPMJU |
93 47404 | GACG | TTGA | V | null | 681339300 | true | ITTSCTVWERUBUYFRQAZEOOVZJFXKRBSPXSRJHJMNUZVVGBGRNLCTBUBYRE | null | null | PBMUTRLSEYOQUBOR |
94 48271 | GAGCG | TTTAT | Z | null | 300539013 | true | null | null | 0.936695453283102 | YURKLHJCGPENFCMKHHRQKKZSZXYRELEZOLEJK |
95 48812 | CT | GG | B | null | -538906411 | false | ERXDZFDWPGMMPWASXLFEMMHIIRGLTWABTAHO | null | 0.7202708244462117 | DOUIHQBODOZVZMZKNJIVKSVNASIVINPVYVOOFJZLLPJAFKPFDVHROQPHOPRLLGYJFDTJWMSIQXMEWEAZFGHCI |
96 49292 | TGGT | CACG | P | null | 2113525344 | false | OXWUWWVTQCERGGEXGBKDKARWVUJORUWGNVSSQWFYCDFHHPEE | null | null | null |
97 49663 | TTCTA | GGTAG | H | null | -1954124469 | false | GKFGNIUNTJWMMJQHSKQ | null | null | YNLPWODAVFQLYFWYGSXOQWBSZMNVAMWWRCTCJDBQOFZHSTNZA |
98 49944 | TAAC | CGCA | G | null | -1858433447 | true | RVKVELGN | null | 0.8010342281968461 | IVYJCJCARHWGLTWGVOVBBSKLOOZKHCWJZYEZKSPMSDXYJXODFUCNQJPJJQLSMLNNQFYIWKZIB |
99 50194 | CTT | TAC | Y | null | -944159107 | true | QYFRYGYRGQQXTQSITYGVHCIJQYUMGDLDKITYVVNHWOBSZWJLXTOEHBWLJAJASVDEOFQVPOEGNJ | null | 0.06701482985829554 | YWMZAJHDQZT |
[INFO] Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.016 s - in org.snpsift.tests.unit.TestCasesDataFrameMnp
[INFO] Running org.snpsift.tests.unit.TestCasesDataFrameIns
DataFrame: INS, size: 100, current index: 100, memory: 63.4 KB
Field types:
##INFO=<ID=field_char,Number=0,Type=Character,Description="">
##INFO=<ID=REF,Number=0,Type=String,Description="">
##INFO=<ID=field_int,Number=0,Type=Integer,Description="">
##INFO=<ID=field_bool,Number=0,Type=Flag,Description="">
##INFO=<ID=field_string_2,Number=0,Type=String,Description="">
##INFO=<ID=ALT,Number=0,Type=String,Description="">
##INFO=<ID=field_float,Number=0,Type=Float,Description="">
##INFO=<ID=field_string,Number=0,Type=String,Description="">
0 130 | | GACTC | W | null | 392236186 | false | FFVDPCDVBXJSQCOQZPXBTJGJYGUPJFGVNNNHQUDVOYXEBBPQCNHEHPBPZOQGQUUV | null | 0.36878291341130565 | ZVMGTYMKSHHVG |
1 1113 | | CAG | Y | null | 1248616208 | true | EGILYUTDVAIFEOZYGHKARCZKVIZSFEDWAATTXBGTQUYDTQDGOYRSCIDNLNPVZTXTZUNERDJENKLHKXYEMFMQ | null | 0.805730942661998 | IHFQWUSYUOXQVRXNTLWTQRTLGZHNXJGL |
2 2034 | | TGA | H | null | 2096791762 | false | UVPLGVIJEDMQLNYMXTSWVOERCTXUKSWFGOET | null | 0.20057805982204702 | XLUSSYJWTCQVIFLIJUELKBKEYJKNTHRFDXBCCKBLVOSVEUQFWTNZKBFUZYSRXCKKT |
3 2775 | | TCTGG | R | null | 416003605 | false | CTVQNSDPJFZMDVOZIAHTCCKYPNKJELMEJCCCBAXESFLUYOJPARNUOSXOMPBK | null | 0.20222269912693658 | QDSAYJBJPSXKJQEUTDCSYARPMLCBJQVLWOVIJFGCPTTGMGCXHAYYLXA |
4 3709 | | GTT | A | null | -2030386360 | false | NJEPJICSFDIBMCDIQEETUIGTSZJPBVKGYBSVUHJBXPLIAMKD | null | 0.9001801157494951 | DCZNFMRXEWAMVAFWWRYGGOTPRS |
5 4212 | | AAAGGT | N | null | -343155651 | true | IKUDWOJEACFAGHAJUAGUXHJXRXWJUZTUYIHWWHCPJPBKFZBMNESHHXQXSIOOTQBYAMZR | null | 0.1015136969559961 | RDGKVKARTBDCKYMOCEFUBDVXECTMHEVVOZPUTFMAKDPSHTHARUGHBUTZYQGKGJWBPOXVODCKIZGLHJCVWJPDTEPZKMCQAQ |
6 4241 | | CGT | W | null | -1117389689 | true | null | null | 0.6213511710359201 | LBJTOPXYAVBUFKFXCYZJXGYVICKOAMFVVWSPTNCGQIEMXRMHTEIGR |
7 4605 | | TCTCG | G | null | -1170372084 | false | TZPNIWMONL | null | 0.47810166001754617 | TUDNVRJBQVPCOIEJRXLFNYGZGASEUGGPSBVAVQAISGEPO |
8 4989 | | AAAT | B | null | 1856078580 | false | XNMTUYJPZYRUZCWFGZVEUUGMRBHYLGVDHQHETXOLCKQWDSOOPYFTKEUSOFRMKCHTCDASCZBWYYWFGVFTKARFUSEWVKGO | null | 0.357239736902605 | YMAVCOMBUUTBXWQKICCOGOWJJGUZZCQWQYUQQTKMUBBNRIJOSKIGWEOJWYMVUDHD |
9 5739 | | AGAAT | X | null | 82125448 | true | QIYBBUBAZLCDFWYENCGBPHXSRWAOUSCYHUHUBGDWQETIVGKEMLV | null | 0.5895111591883899 | LZVCADPXDFSLLACZQMHEWEYJWJWQVRQKHZFHKBJCCBTEBDJKRNQUULWPMBXFIJAJIWKOWUCMTSW |
10 6339 | | AGTT | I | null | 1487791715 | false | ZWLITSIB | null | 0.4546689517646505 | QHTZFSFVYK |
11 6409 | | CA | S | null | 1763965218 | true | XLOBWQRTANIBWUKCXIEUXXTAZJ | null | 0.007031523778798898 | FIYNIVADIWAXPTXTVODSUOZTPWRVHQMFXCKFYTNWGKENKRJLZXOPKYMRYUQSVPFUZG |
12 7233 | | ATGCT | Q | null | -1705138200 | false | ZTCWJEGQOFABQPIKEPQYVZJDJKZSAFIAAHSWFGVIBKKGFWKBYZYNSN | null | 0.7645424751954817 | AEJFNLPAVTXNBSMPGICZGSAAKUXYRDHISDKIKEXJRDMJIBLOBLSKDWFONVIKAEYDXPO |
13 7870 | | GCCT | H | null | 353184724 | false | | null | 0.2791777177971343 | ATIARJNANENEUPMRUWTMUTOOPMQNUGIHZTBJTLIFFBHNWHX |
14 8682 | | GTA | Y | null | 411614493 | null | YXBMRVWHHYVCLDTIMJZUEMQPCYGQYRZLRREBLEBHRQZRGEYWHCEBYNFJGRCAUIVMXQXRDXKNXIQFMHOC | null | 0.982808162985235 | KN |
15 9587 | | TAGC | A | null | -152282141 | true | ZUEFDEJNV | null | 0.8385493805073976 | SOP |
16 10532 | | AA | P | null | -1558269714 | true | WHBLPLKJKWNFXJF | null | 0.28736669172469376 | OXPYASMSHLSHBDGHYGPIRBDKXCPUUXUBSELUPR |
17 11463 | | TATCAA | W | null | -384510011 | false | NNIKYQTFEOEHQDCMXXGNLSSWJIIPEMJKSOV | null | 0.6371545550232023 | HKOXRNGJGVRXGVGFTVBPELFIVQAXUJQEJUMISRBUUMGFVSGRPTSDYQ |
18 11520 | | AAGCAT | P | null | 2074911081 | true | HUQLXZIVVZTNGEXPPRGWIJFGNMKTZUOIZVXNXQZFDEBETGNMTOBL | null | 0.6872285243865529 | INZHSRJSFVGSMSRVAWKXGXIITFR |
19 12303 | | TCAA | K | null | 1170265868 | true | QYRYSGVHXBWNYGWXWVNWBBASTFMWIMPLAKWIQLCYASAYTWLRZOEZULNPISAMSOKHMUACOJSAMYSFHFDOWTMCRLMYTTAVQ | null | 0.8333157560452243 | null |
20 12973 | | GCCG | D | null | 115966875 | true | GPCRPYIKDMFUPNFRTNVP | null | 0.8139963787551981 | ZLOHQRTHZUBYWZORERPCZFUSOSSEKKLYORBIPYRJUDBIDCVFQZTUNWCGVSDIDIZXMDDAKTUAODSJAAKKPEEF |
21 13953 | | CC | Y | null | 859044042 | false | OCPCAQQYHVYMSZDYZLGDMWLBJJADJNZBAVOBMTNXMJZATPEZATDQXXMYLARYBPGPAPLSOYB | null | null | XXWSJZQXNQOQTVATSQRUUCAKFROSNQESIETCBYNCQKJDXWIHQVGONRRSGZRYORCGVCJXSQSUFGVPCCKOEMOWWQXOBMRHBACQR |
22 14607 | | AGGTAC | L | null | 941788784 | false | XDPIKBKIANCKLACLYINUQMDKFXDI | null | 0.6624030276873565 | MCUWIXPNTHHZZHADJSGVZPTFTXFBASLXSEJEJNCMXPXKEAEIXRRTZWOVCTBZXSFZEKHHLXZIXJ |
23 14825 | | TACGC | R | null | -2074325123 | true | TMUPXGOVUIDXQKLPRET | null | 0.018681289917958255 | WXBHOJWCYZUUUVSTMVQTOL |
24 15691 | | ACA | W | null | 252862157 | true | RXWUDPVRSRMKLUCGTCFRDYIDIJFXVPQAKHPQEWWNHVSQLOTMXOVRAGOTTXTCDDIX | null | 0.8168426301088789 | WXBVOUOUYTQUNPJDEXQEXRAAQDWLXMONCLSJNJFGBQRLQGVCFGVOADMY |
25 16531 | | CT | X | null | 1665655642 | false | GNGFXOY | null | null | VWJSEISSNATDXNUGEPQVNYFYDKVSQXWTECOSPWSYPWHFHTNZLHHCQDWURHCUCFMYMTWLAEORAANJSPJFRKXQOSMDDYBVPN |
26 17527 | | CCCGAG | F | null | null | true | TUTUSRRDMJNIGBCJUBZXLDNN | null | 0.5822841538996832 | YLCD |
27 17938 | | TTA | W | null | -1600039699 | true | null | null | 0.32403626900832316 | WDHOYTRBOKNAZOGGLAHUDG |
28 18033 | | ATCAT | A | null | 1645484388 | false | FFHLCYGTPEMXGDGHWYUWKWRPOEUAAVSFEFMTYWHFBGMHHFEMYPISXCFPBUDSQGLOBMZVVFLNSWMQXUCJTEKJBHRBK | null | 0.209445808007097 | WIFOJXYYHZGVIWJFFVQXUOBTPVATCWTSSEDAGAQRDSPMURZGGYMIELVHMRKLLCG |
29 18069 | | AAGTGG | null | null | 641853241 | false | GXUEAFPGVRPBB | null | 0.9492585897886805 | MMVQSQTSRSIRDVTNMTRXPBHFNJSKHXWIQWUUWZXQFUVXVAIJYKTFJOCXPZVUPWVJCUHEB |
30 18925 | | ATGAGA | G | null | -1415227265 | true | UXLEAMIGIACWWMBNSJUJALKXXPVHUIRPUEIYKIREKZGFGBEAADUUMWYHAEHMXFNGJXNTYDVSJEYOUPPNBVRPSISCUD | null | 0.5796633000167881 | MMFFDRVQJWARQPOLYAIVYZQWDQPYHXAJOITFCVMOPIMPXRLKAIEIOUMPNXSABCPGVHHLJEBZYNSDERCMAIXBNIQRIEMDHOQFQ |
31 19488 | | CCA | H | null | -943628690 | false | NEDJSAMHXJDPHXFJUVINTKURUNTGXBCRIYGMXGLYBFIHLNCHAUOTOBMXB | null | 0.3113658731648862 | DVXAMQMWWROUPEHPKRIHEMLGVFOGEXQAHOSMXAJGLFIOEWERSVVSAJWPPTKAZQRFFFVRYSYV |
32 19537 | | AGGCGA | Q | null | 1251603443 | false | null | null | 0.5257286882896216 | GPCOYIRUODLHHZGLMBQAJLGCZOUMEVVTADJIMOLI |
33 19780 | | GGA | null | null | null | true | UXJCGASKRFLVSUERWOAEHZWLSQJATLMHBLMPHXLKKCJCRPRWZMRUHRDHRWTPNJDWQYQEYTRZGFJYAWMGVKTNMFTZ | null | 0.2230352688593391 | null |
34 20604 | | AAT | L | null | 356208355 | false | null | null | 0.5020444853612951 | MXFPMGJWHVBMIISKYUETNMSZMQMOXJFESSUVIOIQBGIVNRJOMZVWXWMONEKKHMGZCBTCVGNN |
35 20862 | | ACT | T | null | -660348769 | true | XRZRFDZRKFJOMCLPTTEKBFTTAFFZUAIU | null | 0.34360523073670424 | QMNRSPVOKGXZIMBNHOHFIONKJDLERDGTFZPBBLHWZQAMTRPVRW |
36 20881 | | GTCCT | Q | null | 1228241393 | true | CUCQXBOMEYSHEELIYNVOKDHIXALLPUSA | null | null | MCVDIGDQCKOTDGCQOGRHZTCYBZORDEBIMVHWPTPDSDLDEGQHTUUHBYSKXKDGWD |
37 20979 | | TCC | F | null | -1865060559 | false | EAJKVRSXRELHZXDYXGCQDQQEEPBAXJKYOLRXTHOY | null | null | UVDIAXJXSRAABIXFMQFNGHX |
38 21774 | | AG | I | null | 1214916171 | true | null | null | 0.14525940093796808 | KMIVESHZXXEALXRGCNLDFIXNZUPCZBSDODUKCOUTKXIRBMYCWNUDNNGDBTLFEYVTQKTOGHTWJCOISHZBCOER |
39 22146 | | ATCT | F | null | -33582533 | false | CHTPHGWMYYPIWPAHZMSNEIIVXNKHDIKC | null | 0.7079952995511792 | JJHTKRYJFYFQLAKZUSSPYAPSWBQETRQQLRESQTQPMYWUY |
40 22171 | | TCGT | K | null | -1463321969 | true | null | null | 0.7829445841041348 | null |
41 22799 | | TCG | N | null | -1055384584 | true | PSQQOQTKLV | null | 0.06566831133672113 | SVAQLBASZKUOAQXSZYHTFPESQNYFKQ |
42 23368 | | ACGCTG | W | null | 731584253 | true | XJUFDEFEAIUVTSPDSNVBUBAJUXSDHKHHCKPSLSDCLUOIJTCPZTXKZAMMIUSG | null | 0.048538059777159304 | RRGGGIIANNDJRSSXCAJCOPYYTHKUHLZDKCZJYFXCWGKYBDKQCOPZCRZCATNTUFFAAFWFFSVSBSJYSHLOFXYBMY |
43 23897 | | GC | Q | null | 1411429955 | true | JUUTROOOTNOWPKPFZRWZGJGDREVYFYKPCKEHLAWCLGIHAGDZCLUGEUPAZPLXVMDCCMGQOMKTOVGLR | null | 0.7530274401586365 | HJFIMPPDVZXFSSIZVMSEVENLFRCLO |
44 24368 | | GGGCGC | T | null | 1231169964 | false | XSDTKJBNDZXHKWLUOGGPCVERAXXOAVLQKIFLWJJTKVIJQLBOIDWBLDVMGPQODKOLTDOBNXUKJ | null | 0.23882485221390193 | AXHWOPEORODIVFVMHWOXPGIWSRGLUGVEHLXDQTTSIJFGCAHRXFUYRWJHGVJZCGXHLBHRLBCINDKYLGDKTYCLAZVIC |
45 24399 | | GATCTC | A | null | 2006361315 | true | VOVQ | null | 0.33097788987005283 | BQXLOOINVKQYHMPA |
46 24971 | | GAT | null | null | 1172063121 | null | SUDFREILZDQY | null | 0.393494187985291 | G |
47 25760 | | TCCTGC | Z | null | -352846139 | true | LNSWYQIJLEMSYPRLUMZYSM | null | 0.8566224034706998 | PFDMLTTAXEEGFQGXLBBHXRCJVLXRLFKYGSTLWR |
48 26121 | | TGTTT | J | null | null | true | SKNTNRRWSWPOQJYEQWTHBQXHRKWBEPZCHIAWMAKDQYRBPZBSVDVUVMAOYDMVWKCQOPWFYZOOPPWEJLJAXEAFQWFNTTHBRNQFDC | null | 0.10357285179981146 | null |
49 26452 | | CCG | K | null | -1807694237 | false | FNCFTYYJLZYMGNTENXHJSBPOTDAUKOTRZLNYAYGFBKVSHHTGIFDDJOXULGGPJTGVP | null | 0.3354411676849467 | C |
50 26526 | | CGG | W | null | -72850326 | false | YHWBHIFILQDCHDCFNPVQXTQLDDLRNNWGPVDMZCMWALBHBZSDNPAZQNUZCBTV | null | 0.7967442732591338 | EKPQSARFFXUWDNIYWXADIYLUONTQMETNMCPYCWDFLSHSINSSHZSFLFTPMDXIFUGVSFLODMYZHIL |
51 27174 | | GCCG | W | null | null | true | UEWZXQRUFHYOHQSASWDVQTYZFJUUCLNKWXYBNONXNRMRDSFQOYVQPTTMGBOOHSFOWUIJURGROVHDGOLLV | null | 0.6066375620808753 | ZRIJLEGPLJGZK |
52 27844 | | ATA | T | null | 1372927724 | true | PZLVEDGKFHPAFTMIKDCKW | null | 0.21487970910288356 | KSCNVRUEZJVGIUWTXHUDCOQ |
53 27861 | | AG | R | null | 1390363635 | false | IDIWXCNWIISITBTVMNPAYTHIPNCKCARBOCHEUDXOHXBO | null | 0.11814515756399246 | |
54 28452 | | CTATTT | J | null | 1766551354 | false | JKBPLEWXUAUU | null | 0.2813757556627646 | GI |
55 29004 | | CGT | R | null | 1223664887 | true | KZHXRLNAKXKBXLTNWDOSJTUIFRSBDIILLCGQGDPFJVTKNEZBOQHXUGGGGXVAUPORVJZTOJMMUPECSV | null | 0.24077856032548373 | BQJIXFRTNVCQIBZZQJAARJSGJOTHKAVFTWIUOIHRTVRUYF |
56 29577 | | TT | null | null | -1150139141 | false | HXADISRKTIKXY | null | 0.2091512021346421 | VFJLXUAKKXEYZYIMSZQHIQYVCYDEEBKTFLFFLUFTSGJBQGYPKJPUATVBRLNYHIUPECZERSOMBIFLOGISAKLNHGVIVMCRZGOEXFH |
57 30447 | | CCCA | E | null | 1869461585 | false | YEASQAPHIVZCCVYKLUQIIWDFWFESSLYGJQVJSBTUZISTJZGJCDRPCNJCMTEKILBJSYNPCHNB | null | 0.5355040682130194 | HDPVVEJASWCQDXMSCMKQSOUBBBVBJRYNYSLDLERQTAWTAOUNAYMHGNEWNYWEDDDCHLHPAMMB |
58 31106 | | GGTAA | L | null | -1508617016 | false | KVRDEKAKMMIVCNFXLMUOOKIRSCDIVMKWMUBVINKPGRFPAXZAQCYNCFHHGTIVJGFPETBDVJSQBAQBCZIHQFIG | null | 0.07320212412633109 | BLQWQTZGEERZXKCHCRVOGQDTZPZQRZIACBFBDNFDLHOOW |
59 31573 | | CTGCGC | Q | null | 1571851493 | false | HDJDCOBKBBYHBFZDGHGIFVIDZLRXCLXTZSXTKYSTMBQGGRLEXDSRBZJGXWOWHUPII | null | 0.4386539601851286 | EEGLMSAWQTGULKMUEBFERFVNVUBWFASDAKTYBUSRKBLDDWEOFLBRGUYZKDJNGXPPH |
60 31615 | | TAGGT | N | null | -2016612795 | false | NSROCBCLTAXWNYPFVQNKFDAHZSZPMHFLCLYQVZEKQBOLPHTQDLSFTTMPMZPSCZTRZLGJQQUKIIAPGAD | null | 0.1310981753882957 | DKOMRLKHNSPEVN |
61 31948 | | TGCG | null | null | 1344148300 | true | KAWOOVRGFJQKVJRPQASSROBWVZDJKOCRCYMTXUBTDHUANHSZRCNCFBCWIZCNXGDEIMCPB | null | 0.5842806130061003 | ALLRDVNCSQBWFUIKAVQQYZYNBPVPBWIETRLFHEH |
62 32257 | | AGGA | J | null | -835675181 | true | JCLUBGMVFISLNJIC | null | 0.9602366045493509 | VLKFQHDWSTGPETVKXCXKWHSIMDNCPPXMPDZVJUAGJEZ |
63 32888 | | TTC | P | null | -1774917499 | false | EVABQVGYCHUOTAEUPCXSMJBZNDQIYDBVMBDDWTLHTNDQJWCWVCQRXQVDNPNI | null | 0.47228181628336274 | OBZVLBZNPJBGGWENLYYCJTPADCDDQOGHMOVVSZJDCDAWFEBOBSMKUXNYIRQCUBYGFSIMFYUAOECXQBGSKUSCEP |
64 33812 | | CGC | W | null | 901085161 | true | JJKHDMASERCYWA | null | 0.4163303952758649 | ZJMOLGKLDXZXVZZIIIHFMWTOZMHCMXPFIOFRZAWQCTHQNXHDVMXZWXANQSZ |
65 34662 | | ACGG | Y | null | -938444986 | true | BFWBJNIIFDYZWDSDUABTFOWDJHCNWEFLHQSSDKFHQVLDLEYB | null | 0.9407833954772991 | null |
66 35254 | | TCGA | C | null | -1971349990 | false | BNEVBDRXIXKVQHAMWTPLWPN | null | 0.6169287820253964 | ZOISZGQEGO |
67 35973 | | AGTCA | R | null | -1785568496 | true | TFRATSTVGMMNADVITTBCUBYQEBQREDVK | null | 0.46702535450962157 | FAHKHSJBEALCXXDQOQGKMWQYUNAVYXZLMSHZQOQAOMXYIBMPQHOMYJBNEODMVEEFBCTJXHBDBIDKXP |
68 36029 | | TAA | I | null | null | false | CTNNBCPCXUCJIDAGHNODZFIQAKSFLJFVUGJEAODATZBRRL | null | 0.4413689991083415 | EUXCUGFHDUYGCNDAMPRDV |
69 36424 | | AAAT | null | null | 731496163 | true | IARM | null | 0.24726460602879008 | HBLGOAIHYNPLTFNBOQDFQOSGIMGDVID |
70 36697 | | TGC | P | null | -1784374440 | false | ULBRVHWTPPXLD | null | 0.9767443437342928 | WYRVDDYVZKYHE |
71 36781 | | TTTCT | W | null | -626578806 | null | NAITMRTBYICFINELWGCHTRZWHGPSJQDOVVDARUZRDFCR | null | 0.5825804546132891 | XIOZZRBJJIUCGRJFDBUXNZ |
72 37733 | | GCCTTC | E | null | 74119738 | true | EZDPHF | null | 0.2393563548507074 | null |
73 38525 | | TACAT | A | null | -493531815 | false | JVJXWLRQHRDMENXXUODKYHXTZMYUWDVLMXUWUJVJQOFOLKCFROKHUCXYBSBMV | null | 0.9468290018256974 | QVYZEBMKVBMFPHNELKLQQTKDBYWMMMLOMWDKEYBUTFMOPXQHBHWYXRNQZTIPAXUATFOMJWEUBBMYDPULQZMZEDELHUCDBT |
74 39493 | | TG | I | null | -1080358974 | false | AHNQKARYGFZFXQHIJKMWIEKPDQQBBTBRGBKZFMCMBEVLOGA | null | 0.07293217555193243 | WRVWIZSGQPVZGJVDJEEACEUAJYIQKIXRLLYWEHVGXFPHAAUDGWKSKVEWCKVJHOOKWRVKHVYQCQKXUPYHKVOPSCJYNG |
75 40464 | | TC | B | null | -1895266390 | true | DMQDIIPGHVZBDSZEWNRWSUYVVSOYHJJNHKMNULYYCBUUEXHGUEQLVFIECDHCJEXBP | null | 0.02613012878314258 | UTFKJQGNEXEKZSZQSANBMVAXRABRZWJEAEABTMFLNYIAJYPSXDXCZBQOPQMSFJNWUVWDOSQMSWTUMIUHOZCYODCFABS |
76 41209 | | GTTTGT | L | null | 1351870056 | true | null | null | 0.5198764636109314 | NTTSXXCLCCPJRBGGEOPFRVIOUHAVSYGXMMWZEJTKLGQIGRWFRRQPOKVFNLU |
77 42149 | | CT | X | null | null | false | SCGDKYTEGYYTNJQBYHCWLKKNLPUGLUZPEPQWRMMWVETGLEKPBVHLRZZCIVSXZRKBEOER | null | 0.7721649771204521 | BZBKLTJMSURAYRXBCQMBFCCJLLATENBRRGHPSMAIZCPBATXXVHGDQXVTUTLCCU |
78 42284 | | ATGTA | J | null | -597273619 | null | ULZAQBBRFRJGAZJFYSHSIBGCAUOFFYVSTFHZXHGROHWPSYMDCUYXFUMVUZPPY | null | 0.12562854211500862 | QUKFCWVILOIQRMKLWKVIMPSQGQQNCWUOOODFXZXMMRLQOTVYZPCMTXLUFJUZPNNKYYWJASSEOOTVOMHEQALCBNSOIU |
79 43116 | | GTCCG | H | null | -1183505179 | true | HEFPDIISRJLHXNORWCADYZZKOKNDIJQWVENOKRPELATYNBXBIXFNZNJOPDWFPVEGBDMNZOFIEPCPEANBDLHYXXFKJMJVZNNVT | null | 0.6498267424172269 | KBIKE |
80 44066 | | TA | X | null | -123349300 | true | null | null | 0.14198551661486014 | GWYTQNLEWXWBHGEOLXJAFLXULPZGOHHPVYKONTTVCOQNLCWSMQUCHQQLSV |
81 44869 | | TGT | N | null | -935455867 | false | DENAEMVIQ | null | 0.8050034418999328 | HLCUIXZZIYXHYQTEPKZLFFDEOMBEYHZSGIQQETOESYPHFJTNZIUKYPRCYFYRJTIMZCUTWALOTKNBHTORFBZWSP |
82 45374 | | CATAGT | Y | null | 128319085 | true | QQSBHHFNJMSBKHRYXQMXNCHRFXSPGAOWMOMIAH | null | 0.944310006681651 | RLFULNBVZYMWMCWSNATKMXIBTIDOMJAMIHYVSZPXVTNOEXWQQVTGTYHRYIKSBPMDLKY |
83 45794 | | GCC | D | null | -103662317 | true | E | null | 0.6836398150836674 | QMSSRMHZWJVVUOMBPVLGTNWXG |
84 46251 | | AGT | I | null | null | false | IUXBMYTCTJJQZLBEIWXLIDELTXVWYOGYCNFD | null | 0.12377768791440902 | PGGYYEALDQDPRHSPDBXOVSQDYPTSBOHIXPFDYCFBWFIJOYSGWEI |
85 46963 | | TCTTGC | I | null | 1786679007 | true | GMJQZLJFYKYFBXNSVJTLWNHBEUMPEFUCIPJJNTHMLQTYJURKMRXYHDULOETRHFDJWPUVXZZYK | null | null | ALCSFUBICUYVGZRUCWQPBGBNWRLKDJYERMIINDEAFXIIBLWZYUZUWYXQZREBEHX |
86 47125 | | GTTTC | N | null | -1587699739 | true | QCBJLYOLUVOCIFUEZZGW | null | 0.6283732696129124 | DRXZBYFDZCXTCGTGQRTIAPDDYSLBHDYOEYFHHKORYXGSGMUZOCDLFZWPTVNSBZCISAQEHRFONPWQQXCDPSXOBUVDYUVX |
87 47839 | | AA | null | null | -1042917316 | true | FFIBXIWYNWPONALNRDOUUIZOZANCFSHJFAUVMFOZYUDRXIVXGAVYBXSVREX | null | 0.5413399443121274 | LJVVMMXUVVGHNVOZYPQRDQXSFUDEHXTGNQQDVBKIEZBVIVOYKQVRQYCMJAMIHTRDJLBERTXDYQZAPBEVZQOPJLNBCCVL |
88 48232 | | AAAT | F | null | -887604636 | null | KXJIAKLYIUGICL | null | 0.6177093967642714 | CYFWSDUVNNDFUBOGYSZGEJGR |
89 49227 | | AT | Z | null | -471111821 | true | null | null | 0.9656868712398303 | PFWXONPKQU |
90 49693 | | GGTG | A | null | 1044117360 | false | XGQLGWRORVMYYKPYAMAZCXGYJCALSCGAZOEWAOGVKFINKYIWQEGYAKQZXEGXNLLREPZFWVCTQTHORMW | null | 0.07708649570475923 | TKHCHMKEYIGEGGZUDIMTLCOYYXOYESTZVLXIYHFLBWVRPVPBOAIVXCWSQVT |
91 50459 | | CCTAA | A | null | -1370440665 | false | AXQHZZKHNCPGXUCFAOCDFSUNIOOVESGTIPFVKUARMUBGZXYUKKFAFX | null | null | IUKQTGFVSEPVTJSEWOEWXDUVMQMTIHNQPTSFSEQDBHZBNESFTNMMBHTCZRTQJGILVEEPCH |
92 50481 | | GCG | R | null | 2066697767 | false | MWKISSQSPVODXUFKNLGZUIAZNNDFNUFAVMYECUHCA | null | 0.872347902538948 | CSZJSNBGPIFIBAHZYTPMRBM |
93 50858 | | CAT | H | null | -587101376 | false | MYCFSVUZWZMVVVAMVZAAQHDHBHFFAYFMRFBHJSXUNGJIT | null | 0.7620400986238222 | LYNCQJNXKGTZFGXFMSS |
94 50860 | | CAGCA | I | null | 1098547523 | true | ESMQRCAXYFQXI | null | null | IJGPIYRYOKKJGWQFGMJFLHZAHXAQFYBZVV |
95 51603 | | TTAAT | G | null | 1908010737 | true | MVTAGLUXLTSFSUXWPAZCGDEZLOURIYYLWILVSASNXJPRPTZJUVXIXGKFSRYQHMBXLWGDWVBAGMPTPSDIRXOPHWHAEEWOYVMXSL | null | 0.43238451506653686 | QYKPUXKEQCQLIRLCADJZBWMMOMXRGCZSQWBRYGDGRIKAMQVKJOHLFKMJVLVPEWSAPMKKJOCHYNCBMNZGHZDQIJCWDWAXBELON |
96 51648 | | CCATGC | N | null | -1749037701 | false | SVJIAGBAADWLGGNHMAZQXNOKCAAFLMKMAPJWDQJCYEVSBUBXDQEBUOZRNZMEYWNTPMJUZMHOMCUHBNTWZFLRLFXDZV | null | 0.24978790296557885 | RSJAEXCVDZTHLX |
97 51910 | | TGGAT | F | null | 895867645 | true | EASCDWYPBMUTRLSEYOQUBORWBWITTSCTVWERU | null | 0.41222705817949823 | null |
98 52327 | | ATCAGG | K | null | null | false | UBYREHOBNQZAXRCSAFUCKBVTXSFZIREOPSNYURKLHJCGPENFCMKHHRQKKZSZXYRELEZOLEJKZFB | null | 0.5758661835439116 | JHJMNUZVVGBGRNL |
99 52862 | | TCGGGA | I | null | -1934920832 | false | OHYE | null | 0.6240226122495972 | UIHQBODOZVZMZKNJIVKSVNASIVINPVYVOOFJZLLPJAFKPFDVHROQPHOPRLLGYJFDTJWMSIQXMEWEAZFG |
[INFO] Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.023 s - in org.snpsift.tests.unit.TestCasesDataFrameIns
[INFO] Running org.snpsift.tests.unit.TestCasesFilterALL
[INFO] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.133 s - in org.snpsift.tests.unit.TestCasesFilterALL
[INFO] Running org.snpsift.tests.unit.TestCasesAnnotate
TestCasesAnnotate.test_31_annotate_minimal_representation_db(642): Test
TestCasesAnnotate.test_29_repeated_IDs(618): Test
TestCasesAnnotate.test_01(145): Test
TestCasesAnnotate.test_02(153): Test
TestCasesAnnotate.test_03(161): Test
TestCasesAnnotate.test_04(169): Test
TestCasesAnnotate.test_05(181): Test
TestCasesAnnotate.test_06(192): Test
TestCasesAnnotate.test_07(217): Test
TestCasesAnnotate.test_08(232): Test
TestCasesAnnotate.test_09(245): Test
TestCasesAnnotate.test_11(273): Test
TestCasesAnnotate.test_12(300): Test
TestCasesAnnotate.test_13(320): Test
TestCasesAnnotate.test_14(340): Test
TestCasesAnnotate.test_15(356): Test
TestCasesAnnotate.test_16(372): Test
TestCasesAnnotate.test_17(390): Test
TestCasesAnnotate.test_18(415): Test
TestCasesAnnotate.test_19(428): Test
TestCasesAnnotate.test_20(439): Test
TestCasesAnnotate.test_21(453): Test
TestCasesAnnotate.test_22(479): Test
TestCasesAnnotate.test_24(509): Test
TestCasesAnnotate.test_25(539): Test
TestCasesAnnotate.test_35(693): Test
TestCasesAnnotate.test_36(711): Test
TestCasesAnnotate.test_38(732): Test
TestCasesAnnotate.test_39(743): Test
TestCasesAnnotate.test_40(762): Test
TestCasesAnnotate.test_41(770): Test
TestCasesAnnotate.test_42(781): Test
TestCasesAnnotate.test_43(809): Test
TestCasesAnnotate.test_44(835): Test
TestCasesAnnotate.test_45(861): Test
TestCasesAnnotate.test_33_empty_db(665): Test
TestCasesAnnotate.test_26_repeat_db_entry(568): Test
TestCasesAnnotate.test_32_annotate_minimal_representation_input(654): Test
TestCasesAnnotate.test_28_exists(596): Test
TestCasesAnnotate.test_34_dbStartsOnDifferentChromo(676): Test
TestCasesAnnotate.test_23_allele_specific_annotation_missing_R(491): Test
TestCasesAnnotate.test_27_repeat_db_entry(580): Test
[INFO] Tests run: 42, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 78.672 s - in org.snpsift.tests.unit.TestCasesAnnotate
[INFO] Running org.snpsift.tests.unit.TestCasesDbNsfp
TestCasesDbNsfp.test_01(113): Test
TestCasesDbNsfp.test_02(138): Test
TestCasesDbNsfp.test_03(160): Test
TestCasesDbNsfp.test_04(179): Test
TestCasesDbNsfp.test_05(200): Test
TestCasesDbNsfp.test_06(223): Test
[INFO] Tests run: 11, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 21.415 s - in org.snpsift.tests.unit.TestCasesDbNsfp
[INFO] Running org.snpsift.tests.unit.TestCasesGwasCatalog
TestCasesGwasCatalog.test_01(34): Test
WARNING_DUPLICATE_PRIMARY_KEY: GwasCatalog entry chr:pos '19:16185558' already exists
WARNING_DUPLICATE_PRIMARY_KEY: GwasCatalog entry RS number 'rs8109288' already exists
WARNING_DUPLICATE_PRIMARY_KEY: GwasCatalog entry chr:pos ':-1' already exists
WARNING_DUPLICATE_PRIMARY_KEY: GwasCatalog entry chr:pos ':-1' already exists
WARNING_DUPLICATE_PRIMARY_KEY: GwasCatalog entry chr:pos ':-1' already exists
WARNING_DUPLICATE_PRIMARY_KEY: GwasCatalog entry chr:pos ':-1' already exists
WARNING_DUPLICATE_PRIMARY_KEY: GwasCatalog entry chr:pos ':-1' already exists
WARNING_DUPLICATE_PRIMARY_KEY: GwasCatalog entry chr:pos '19:46172277' already exists
WARNING_DUPLICATE_PRIMARY_KEY: GwasCatalog entry RS number 'rs11671664' already exists
WARNING_DUPLICATE_PRIMARY_KEY: GwasCatalog entry chr:pos '11:116648916' already exists
WARNING_DUPLICATE_PRIMARY_KEY: GwasCatalog entry RS number 'rs964184' already exists
WARNING_DUPLICATE_PRIMARY_KEY: GwasCatalog entry chr:pos ':-1' already exists
WARNING_DUPLICATE_PRIMARY_KEY: GwasCatalog entry chr:pos '6:161010117' already exists
WARNING_DUPLICATE_PRIMARY_KEY: GwasCatalog entry RS number 'rs10455872' already exists
WARNING_DUPLICATE_PRIMARY_KEY: GwasCatalog entry chr:pos ':-1' already exists
WARNING_DUPLICATE_PRIMARY_KEY: GwasCatalog entry chr:pos ':-1' already exists
WARNING_DUPLICATE_PRIMARY_KEY: GwasCatalog entry chr:pos '1:67705957' already exists
WARNING_DUPLICATE_PRIMARY_KEY: GwasCatalog entry RS number 'rs11209026' already exists
WARNING_DUPLICATE_PRIMARY_KEY: GwasCatalog entry chr:pos ':-1' already exists
WARNING_DUPLICATE_PRIMARY_KEY: GwasCatalog entry chr:pos '19:45412078' already exists
WARNING_DUPLICATE_PRIMARY_KEY: GwasCatalog entry RS number 'rs7412' already exists
WARNING_DUPLICATE_PRIMARY_KEY: GwasCatalog entry chr:pos '2:169763147' already exists
WARNING_DUPLICATE_PRIMARY_KEY: GwasCatalog entry RS number 'rs560887' already exists
WARNING_DUPLICATE_PRIMARY_KEY: GwasCatalog entry chr:pos ':-1' already exists
WARNING_DUPLICATE_PRIMARY_KEY: GwasCatalog entry chr:pos ':-1' already exists
WARNING_DUPLICATE_PRIMARY_KEY: GwasCatalog entry chr:pos ':-1' already exists
WARNING_DUPLICATE_PRIMARY_KEY: Too many 'WARNING_DUPLICATE_PRIMARY_KEY' warnings, no further warnings will be shown.
TestCasesGwasCatalog.test_02(50): Test
[INFO] Tests run: 2, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 4.216 s - in org.snpsift.tests.unit.TestCasesGwasCatalog
[INFO] Running org.snpsift.tests.unit.TestCasesDataFrameColumnLong
[INFO] Tests run: 3, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 5.071 s - in org.snpsift.tests.unit.TestCasesDataFrameColumnLong
[INFO] Running org.snpsift.tests.unit.TestCasesBoolArray
[INFO] Tests run: 7, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 2.512 s - in org.snpsift.tests.unit.TestCasesBoolArray
[INFO] Running org.snpsift.tests.unit.TestCasesLd
[INFO] Tests run: 1, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 0.021 s - in org.snpsift.tests.unit.TestCasesLd
[INFO]
[INFO] Results:
[INFO]
[INFO] Tests run: 473, Failures: 0, Errors: 0, Skipped: 0
[INFO]
[INFO] ------------------------------------------------------------------------
[INFO] BUILD SUCCESS
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 09:46 min
[INFO] Finished at: 2026-03-26T19:28:49-12:00
[INFO] ------------------------------------------------------------------------
create-stamp debian/debhelper-build-stamp
dh_prep
dh_auto_install
/usr/lib/jvm/default-java/bin/java -noverify -cp /usr/share/maven/boot/plexus-classworlds-2.x.jar -Dmaven.home=/usr/share/maven -Dmaven.multiModuleProjectDirectory=/build/reproducible-path/snpsift-5.2.e\+dfsg -Dclassworlds.conf=/etc/maven/m2-debian.conf org.codehaus.plexus.classworlds.launcher.Launcher -s/etc/maven/settings-debian.xml -Ddebian.dir=/build/reproducible-path/snpsift-5.2.e\+dfsg/debian -Dmaven.repo.local=/build/reproducible-path/snpsift-5.2.e\+dfsg/debian/maven-repo --batch-mode -Ddebian.dir=/build/reproducible-path/snpsift-5.2.e\+dfsg/debian -Ddebian.package=libsnpsift-java -Dmaven.repo.local=/build/reproducible-path/snpsift-5.2.e\+dfsg/debian/maven-repo -Dinstall.to.usj=true org.debian.maven:debian-maven-plugin:2.6:install
OpenJDK 64-Bit Server VM warning: Options -Xverify:none and -noverify were deprecated in JDK 13 and will likely be removed in a future release.
[INFO] Scanning for projects...
[INFO]
[INFO] ------------------------< org.snpsift:snpsift >-------------------------
[INFO] Building SnpSift 5.2
[INFO] from pom.xml
[INFO] --------------------------------[ jar ]---------------------------------
[INFO]
[INFO] --- debian:2.6:install (default-cli) @ snpsift ---
[INFO] Cleaning pom file: /build/reproducible-path/snpsift-5.2.e+dfsg/pom.xml.save with options:
[INFO] --keep-pom-version --package=libsnpsift-java
[INFO] --rules=/build/reproducible-path/snpsift-5.2.e+dfsg/debian/maven.rules
[INFO] --ignore-rules=/build/reproducible-path/snpsift-5.2.e+dfsg/debian/maven.ignoreRules
[INFO] --published-rules=/build/reproducible-path/snpsift-5.2.e+dfsg/debian/maven.publishedRules
[INFO] Install jar for snpsift into /usr/share/java
[INFO] ------------------------------------------------------------------------
[INFO] BUILD SUCCESS
[INFO] ------------------------------------------------------------------------
[INFO] Total time: 2.379 s
[INFO] Finished at: 2026-03-26T19:28:58-12:00
[INFO] ------------------------------------------------------------------------
mh_resolve_dependencies --non-interactive --offline --build -plibsnpsift-java --javadoc --base-directory=/build/reproducible-path/snpsift-5.2.e\+dfsg --non-explore
Failed to parse /usr/share/maven-repo/org/biojava/biojava-structure/6.x/biojava-structure-6.x.pom
javax.xml.stream.XMLStreamException: ParseError at [row,col]:[117,21]
Message: Element type "debian.org.rcsb." must be followed by either attribute specifications, ">" or "/>".
at java.xml/com.sun.org.apache.xerces.internal.impl.XMLStreamReaderImpl.next(XMLStreamReaderImpl.java:652)
at org.debian.maven.repo.POMReader.readPom(POMReader.java:82)
at org.debian.maven.repo.POMReader.readPom(POMReader.java:57)
at org.debian.maven.repo.Repository.scan(Repository.java:397)
at org.debian.maven.repo.Repository.scan(Repository.java:394)
at org.debian.maven.repo.Repository.scan(Repository.java:394)
at org.debian.maven.repo.Repository.scan(Repository.java:394)
at org.debian.maven.repo.Repository.scan(Repository.java:394)
at org.debian.maven.repo.Repository.scan(Repository.java:201)
at org.debian.maven.repo.Repository.scanOnce(Repository.java:196)
at org.debian.maven.repo.POMTransformer.usePluginVersionsFromRepository(POMTransformer.java:107)
at org.debian.maven.packager.DependenciesSolver.main(DependenciesSolver.java:907)
Failed to parse /usr/share/maven-repo/org/biojava/biojava-structure/6.1.0/biojava-structure-6.1.0.pom
javax.xml.stream.XMLStreamException: ParseError at [row,col]:[117,21]
Message: Element type "debian.org.rcsb." must be followed by either attribute specifications, ">" or "/>".
at java.xml/com.sun.org.apache.xerces.internal.impl.XMLStreamReaderImpl.next(XMLStreamReaderImpl.java:652)
at org.debian.maven.repo.POMReader.readPom(POMReader.java:82)
at org.debian.maven.repo.POMReader.readPom(POMReader.java:57)
at org.debian.maven.repo.Repository.scan(Repository.java:397)
at org.debian.maven.repo.Repository.scan(Repository.java:394)
at org.debian.maven.repo.Repository.scan(Repository.java:394)
at org.debian.maven.repo.Repository.scan(Repository.java:394)
at org.debian.maven.repo.Repository.scan(Repository.java:394)
at org.debian.maven.repo.Repository.scan(Repository.java:201)
at org.debian.maven.repo.Repository.scanOnce(Repository.java:196)
at org.debian.maven.repo.POMTransformer.usePluginVersionsFromRepository(POMTransformer.java:107)
at org.debian.maven.packager.DependenciesSolver.main(DependenciesSolver.java:907)
Failed to parse /usr/share/maven-repo/org/biojava/biojava-structure/6.x/biojava-structure-6.x.pom
javax.xml.stream.XMLStreamException: ParseError at [row,col]:[117,21]
Message: Element type "debian.org.rcsb." must be followed by either attribute specifications, ">" or "/>".
at java.xml/com.sun.org.apache.xerces.internal.impl.XMLStreamReaderImpl.next(XMLStreamReaderImpl.java:652)
at org.debian.maven.repo.POMReader.readPom(POMReader.java:82)
at org.debian.maven.repo.POMReader.readPom(POMReader.java:57)
at org.debian.maven.repo.Repository.scan(Repository.java:397)
at org.debian.maven.repo.Repository.scan(Repository.java:394)
at org.debian.maven.repo.Repository.scan(Repository.java:394)
at org.debian.maven.repo.Repository.scan(Repository.java:394)
at org.debian.maven.repo.Repository.scan(Repository.java:394)
at org.debian.maven.repo.Repository.scan(Repository.java:201)
at org.debian.maven.packager.DependenciesSolver.getRepository(DependenciesSolver.java:231)
at org.debian.maven.packager.DependenciesSolver.solveDependencies(DependenciesSolver.java:237)
at org.debian.maven.packager.DependenciesSolver.main(DependenciesSolver.java:922)
Failed to parse /usr/share/maven-repo/org/biojava/biojava-structure/6.1.0/biojava-structure-6.1.0.pom
javax.xml.stream.XMLStreamException: ParseError at [row,col]:[117,21]
Message: Element type "debian.org.rcsb." must be followed by either attribute specifications, ">" or "/>".
at java.xml/com.sun.org.apache.xerces.internal.impl.XMLStreamReaderImpl.next(XMLStreamReaderImpl.java:652)
at org.debian.maven.repo.POMReader.readPom(POMReader.java:82)
at org.debian.maven.repo.POMReader.readPom(POMReader.java:57)
at org.debian.maven.repo.Repository.scan(Repository.java:397)
at org.debian.maven.repo.Repository.scan(Repository.java:394)
at org.debian.maven.repo.Repository.scan(Repository.java:394)
at org.debian.maven.repo.Repository.scan(Repository.java:394)
at org.debian.maven.repo.Repository.scan(Repository.java:394)
at org.debian.maven.repo.Repository.scan(Repository.java:201)
at org.debian.maven.packager.DependenciesSolver.getRepository(DependenciesSolver.java:231)
at org.debian.maven.packager.DependenciesSolver.solveDependencies(DependenciesSolver.java:237)
at org.debian.maven.packager.DependenciesSolver.main(DependenciesSolver.java:922)
Analysing pom.xml...
Checking dependencies for documentation packages...
> dpkg --search /usr/share/doc/antlr4/api/index.html
Found antlr4-doc
> dpkg --search /usr/share/doc/libcommons-math3-java/api/index.html
Found libcommons-math3-java-doc
> dpkg --search /usr/share/doc/libhtsjdk-java/api/index.html
Found libhtsjdk-java-doc
> dpkg --search /usr/share/doc/libsnpeff-java/api/index.html
Found libsnpeff-java-doc
> dpkg --search /usr/share/doc/libtrove3-java/api/index.html
Found libtrove3-java-doc
bash -c "rm -f target/apidocs/*.sh target/apidocs/options"
mh_unpatchpoms -plibsnpsift-java
dh_install
jh_installjavadoc
dh_installdocs
dh_installchangelogs
dh_installman
dh_lintian
dh_perl
dh_link
jh_installlibs
jh_classpath
jh_manifest
jh_exec
jh_depends
dh_strip_nondeterminism
dh_compress
dh_fixperms
dh_missing
dh_installdeb
dh_gencontrol
dpkg-gencontrol: warning: package libsnpsift-java-doc: substitution variable ${maven:CompileDepends} unused, but is defined
dpkg-gencontrol: warning: package libsnpsift-java-doc: substitution variable ${maven:Depends} unused, but is defined
dpkg-gencontrol: warning: package libsnpsift-java: substitution variable ${java:Depends} unused, but is defined
dpkg-gencontrol: warning: package libsnpsift-java: substitution variable ${maven:CompileDepends} unused, but is defined
dpkg-gencontrol: warning: package libsnpsift-java: substitution variable ${maven:DocDepends} unused, but is defined
dh_md5sums
dh_builddeb
dpkg-deb: building package 'libsnpsift-java-doc' in '../libsnpsift-java-doc_5.2.e+dfsg-2_all.deb'.
dpkg-deb: building package 'libsnpsift-java' in '../libsnpsift-java_5.2.e+dfsg-2_all.deb'.
dpkg-deb: building package 'snpsift' in '../snpsift_5.2.e+dfsg-2_all.deb'.
dpkg-genbuildinfo --build=binary -O../snpsift_5.2.e+dfsg-2_arm64.buildinfo
dpkg-genchanges --build=binary -O../snpsift_5.2.e+dfsg-2_arm64.changes
dpkg-genchanges: info: binary-only upload (no source code included)
dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
dpkg-genchanges: info: not including original source code in upload
I: copying local configuration
I: unmounting dev/ptmx filesystem
I: unmounting dev/pts filesystem
I: unmounting dev/shm filesystem
I: unmounting proc filesystem
I: unmounting sys filesystem
I: cleaning the build env
I: removing directory /srv/workspace/pbuilder/1573939 and its subdirectories
I: Current time: Thu Mar 26 19:29:59 -12 2026
I: pbuilder-time-stamp: 1774596599
Sat Feb 22 01:07:02 UTC 2025 I: 1st build successful. Starting 2nd build on remote node codethink04-arm64.debian.net.
Sat Feb 22 01:07:02 UTC 2025 I: Preparing to do remote build '2' on codethink04-arm64.debian.net.
Sat Feb 22 01:12:50 UTC 2025 I: Deleting $TMPDIR on codethink04-arm64.debian.net.
Sat Feb 22 01:12:51 UTC 2025 I: snpsift_5.2.e+dfsg-2_arm64.changes:
Format: 1.8
Date: Sun, 16 Feb 2025 12:30:33 +0100
Source: snpsift
Binary: libsnpsift-java libsnpsift-java-doc snpsift
Architecture: all
Version: 5.2.e+dfsg-2
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Pierre Gruet <pgt@debian.org>
Description:
libsnpsift-java - tool to annotate and manipulate genome variants - lib
libsnpsift-java-doc - Documentation for SnpSift
snpsift - tool to annotate and manipulate genome variants - tool
Changes:
snpsift (5.2.e+dfsg-2) unstable; urgency=medium
.
* Restricting autopkgtest architectures
Checksums-Sha1:
a29624a1815469d8147fe968cd3753d6f0d5ba0f 249296 libsnpsift-java-doc_5.2.e+dfsg-2_all.deb
808e8ae48278cacc621c66256c5e92974b5268b9 371592 libsnpsift-java_5.2.e+dfsg-2_all.deb
448ab5686f144467453d0f24760f10f13f017959 4704 snpsift_5.2.e+dfsg-2_all.deb
293088db6878c4242ad816c02efc0adde83d1f24 15251 snpsift_5.2.e+dfsg-2_arm64.buildinfo
Checksums-Sha256:
fdd39fe6d24dc429f86c81b5029a05d4e9ba75c7c078ee329587b310ff412c21 249296 libsnpsift-java-doc_5.2.e+dfsg-2_all.deb
2c1ba9c1b6cf790b9714d5b644c22f5043d27d0bdcc2ef87c0f09ed23288b434 371592 libsnpsift-java_5.2.e+dfsg-2_all.deb
a1e527927894640f976512d38dbb6dfa7282dfc132568333cb09fc4bbee544f4 4704 snpsift_5.2.e+dfsg-2_all.deb
d02562dd1cdbfdf81ea2ec62e01c527ff0eb210d9a810deb3fe88698b0e0955d 15251 snpsift_5.2.e+dfsg-2_arm64.buildinfo
Files:
515162b870a5c873e6787e9527aa97b3 249296 doc optional libsnpsift-java-doc_5.2.e+dfsg-2_all.deb
7a6e43420a3b8e33389c00358596573f 371592 java optional libsnpsift-java_5.2.e+dfsg-2_all.deb
ee265da22d7fccaded3f443d8a90fc3e 4704 java optional snpsift_5.2.e+dfsg-2_all.deb
58bc5ecbac096d61ce565950813dae34 15251 java optional snpsift_5.2.e+dfsg-2_arm64.buildinfo
Sat Feb 22 01:12:52 UTC 2025 I: diffoscope 288 will be used to compare the two builds:
Running as unit: rb-diffoscope-arm64_1-61086.service
# Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.3ibxKXsF/snpsift_5.2.e+dfsg-2.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.3ibxKXsF/snpsift_5.2.e+dfsg-2.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.3ibxKXsF/snpsift_5.2.e+dfsg-2.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.3ibxKXsF/b1/snpsift_5.2.e+dfsg-2_arm64.changes /srv/reproducible-results/rbuild-debian/r-b-build.3ibxKXsF/b2/snpsift_5.2.e+dfsg-2_arm64.changes
## command (total time: 0.000s)
0.000s 1 call cmp (internal)
## has_same_content_as (total time: 0.000s)
0.000s 1 call diffoscope.comparators.binary.FilesystemFile
## main (total time: 0.003s)
0.003s 2 calls outputs
0.000s 1 call cleanup
Finished with result: success
Main processes terminated with: code=exited/status=0
Service runtime: 221ms
CPU time consumed: 221ms
Sat Feb 22 01:12:52 UTC 2025 I: diffoscope 288 found no differences in the changes files, and a .buildinfo file also exists.
Sat Feb 22 01:12:52 UTC 2025 I: snpsift from trixie built successfully and reproducibly on arm64.
Sat Feb 22 01:12:53 UTC 2025 I: Submitting .buildinfo files to external archives:
Sat Feb 22 01:12:53 UTC 2025 I: Submitting 16K b1/snpsift_5.2.e+dfsg-2_arm64.buildinfo.asc
Sat Feb 22 01:12:54 UTC 2025 I: Submitting 16K b2/snpsift_5.2.e+dfsg-2_arm64.buildinfo.asc
Sat Feb 22 01:12:55 UTC 2025 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit.
Sat Feb 22 01:12:55 UTC 2025 I: Done submitting .buildinfo files.
Sat Feb 22 01:12:55 UTC 2025 I: Removing signed snpsift_5.2.e+dfsg-2_arm64.buildinfo.asc files:
removed './b1/snpsift_5.2.e+dfsg-2_arm64.buildinfo.asc'
removed './b2/snpsift_5.2.e+dfsg-2_arm64.buildinfo.asc'