Mon May 13 14:07:41 UTC 2024 I: starting to build seqan-needle/trixie/arm64 on jenkins on '2024-05-13 14:07' Mon May 13 14:07:41 UTC 2024 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/arm64_14/40858/console.log Mon May 13 14:07:41 UTC 2024 I: Downloading source for trixie/seqan-needle=1.0.2+ds-2 --2024-05-13 14:07:41-- http://deb.debian.org/debian/pool/main/s/seqan-needle/seqan-needle_1.0.2%2bds-2.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2275 (2.2K) [text/prs.lines.tag] Saving to: ‘seqan-needle_1.0.2+ds-2.dsc’ 0K .. 100% 201M=0s 2024-05-13 14:07:41 (201 MB/s) - ‘seqan-needle_1.0.2+ds-2.dsc’ saved [2275/2275] Mon May 13 14:07:41 UTC 2024 I: seqan-needle_1.0.2+ds-2.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: seqan-needle Binary: seqan-needle, seqan-needle-doc Architecture: any all Version: 1.0.2+ds-2 Maintainer: Debian Med Packaging Team Uploaders: Michael R. Crusoe Homepage: https://github.com/seqan/needle Standards-Version: 4.6.2 Vcs-Browser: https://salsa.debian.org/med-team/seqan-needle Vcs-Git: https://salsa.debian.org/med-team/seqan-needle.git Testsuite: autopkgtest Testsuite-Triggers: build-essential, cmake, libcereal-dev, libgtest-dev, libseqan3-dev Build-Depends: debhelper-compat (= 13), cmake, libseqan3-dev (>= 3.2.0+ds-5), libgtest-dev, libcereal-dev, pkg-config, doxygen Package-List: seqan-needle deb science optional arch=any seqan-needle-doc deb doc optional arch=all Checksums-Sha1: 2314b18283afd2cfdefd3500c150af168a70f4d2 5049372 seqan-needle_1.0.2+ds.orig.tar.xz 6c11c15e899e769a14a821e6fd7c251c9fa21aeb 6484 seqan-needle_1.0.2+ds-2.debian.tar.xz Checksums-Sha256: 28936c5bdfced7b09ac95459196d90a7a16a8b058f3bd18e552558a12f68ea5a 5049372 seqan-needle_1.0.2+ds.orig.tar.xz e3c577eeb7b5744343c6524afbda73b46b692f8083c2245798a31c331bc67dd6 6484 seqan-needle_1.0.2+ds-2.debian.tar.xz Files: 25b030304d451610574aac31b59fe16d 5049372 seqan-needle_1.0.2+ds.orig.tar.xz 4f170525b9a513630be60e2b56495319 6484 seqan-needle_1.0.2+ds-2.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJCBAEBCgAsFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAmWcRRMOHHRpbGxlYUBy a2kuZGUACgkQV4oElNHGRtGAIw/+J+q8HnYBG75m4E3gIxL4ALhQODZgOpwaAqEc D8qJC5hy/odo1F4TqSm7m8EdeuYz4lLLKhV3OWrSFuRkYoK16QjUrMisQLXaJutb KIGuN6NjzAgSfU3B4bdbS/0mjozYHU/kmTng23VFHQbEGfASl4Lfnm51URw2skpE WXjv5uCO8IXTioutrr5nixhVSdX04Hh5bF8ozo55H+5bPgH8pDWJpqq0y7we+9ja ZrjtMlIijMLZ4THDOVhBOygNqw+kdDc2B612ZAI1OIIx58dwNL+vGKFFQZtCcqMZ VOuLszCuRAxaZJ38ib++kkVBILg5glhzCWKEqrTHJoeecyVFa4ZvGvzuD8rIU9jk YwOEVXh/KpyDqYG16EjHyH6lfMX79uABWGMYF2TRngNFHPV668Q2Sk9l9FX4qOwS 2plx9Gu4We36PK5iBTB06ZhTU6wTkkLekwLUV5RmpBGad9jAmSE+FjfhumBUm4AI +cHGt0WC+eFR+WkFhbp9Iz7rMt2Y3dMolyYjI8wZIQHTp4ljZwkFibg619N2+6xs 8GftbJWiKYq645FH1p22pVqDafN6JtgPHsFGTTYh1qFlH+m8ijkDp4hvllXksmKa 69ipTSgTAbR+acVrWJbTokb6A413oDqm3WCeFD+QmpZt4Pq39/uDf+bFvs/BCN3f xGa83wI= =aDLd -----END PGP SIGNATURE----- Mon May 13 14:07:41 UTC 2024 I: Checking whether the package is not for us Mon May 13 14:07:41 UTC 2024 I: Starting 1st build on remote node codethink01-arm64.debian.net. Mon May 13 14:07:41 UTC 2024 I: Preparing to do remote build '1' on codethink01-arm64.debian.net. Mon May 13 14:13:27 UTC 2024 I: Deleting $TMPDIR on codethink01-arm64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Sun Jun 15 08:30:43 -12 2025 I: pbuilder-time-stamp: 1750019443 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [seqan-needle_1.0.2+ds-2.dsc] I: copying [./seqan-needle_1.0.2+ds.orig.tar.xz] I: copying [./seqan-needle_1.0.2+ds-2.debian.tar.xz] I: Extracting source gpgv: Signature made Mon Jan 8 18:55:15 2024 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tillea@rki.de" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./seqan-needle_1.0.2+ds-2.dsc: no acceptable signature found dpkg-source: info: extracting seqan-needle in seqan-needle-1.0.2+ds dpkg-source: info: unpacking seqan-needle_1.0.2+ds.orig.tar.xz dpkg-source: info: unpacking seqan-needle_1.0.2+ds-2.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying 743f0c2db4ed59aeb6b76744aa8485f208b9f9d2.patch dpkg-source: info: applying privacy dpkg-source: info: applying debian_seqan3 dpkg-source: info: applying create_doc_without_previous_binary_build.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/1950830/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='arm64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' DISTRIBUTION='trixie' HOME='/root' HOST_ARCH='arm64' IFS=' ' INVOCATION_ID='512c187ee52345648a93d38845ead439' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='1950830' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.x4ewUR1G/pbuilderrc_q8fX --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.x4ewUR1G/b1 --logfile b1/build.log seqan-needle_1.0.2+ds-2.dsc' SUDO_GID='109' SUDO_UID='104' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://192.168.101.4:3128' I: uname -a Linux codethink01-arm64 6.1.0-21-cloud-arm64 #1 SMP Debian 6.1.90-1 (2024-05-03) aarch64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Jun 13 17:47 /bin -> usr/bin I: user script /srv/workspace/pbuilder/1950830/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: arm64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), cmake, libseqan3-dev (>= 3.2.0+ds-5), libgtest-dev, libcereal-dev, pkg-config, doxygen dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19744 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on cmake; however: Package cmake is not installed. pbuilder-satisfydepends-dummy depends on libseqan3-dev (>= 3.2.0+ds-5); however: Package libseqan3-dev is not installed. pbuilder-satisfydepends-dummy depends on libgtest-dev; however: Package libgtest-dev is not installed. pbuilder-satisfydepends-dummy depends on libcereal-dev; however: Package libcereal-dev is not installed. pbuilder-satisfydepends-dummy depends on pkg-config; however: Package pkg-config is not installed. pbuilder-satisfydepends-dummy depends on doxygen; however: Package doxygen is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} cmake{a} cmake-data{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} doxygen{a} dwz{a} file{a} gettext{a} gettext-base{a} googletest{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libarchive13t64{a} libbrotli1{a} libbsd0{a} libbz2-dev{a} libcereal-dev{a} libclang-cpp16t64{a} libclang1-16t64{a} libcom-err2{a} libcurl4t64{a} libdebhelper-perl{a} libedit2{a} libelf1t64{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libfmt9{a} libgssapi-krb5-2{a} libgtest-dev{a} libicu72{a} libjsoncpp25{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} libldap-2.5-0{a} libllvm16t64{a} libmagic-mgc{a} libmagic1t64{a} libnghttp2-14{a} libpipeline1{a} libpkgconf3{a} libproc2-0{a} libpsl5t64{a} librhash0{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libseqan3-dev{a} libssh2-1t64{a} libsub-override-perl{a} libtool{a} libuchardet0{a} libuv1t64{a} libxml2{a} libz3-4{a} m4{a} man-db{a} pkg-config{a} pkgconf{a} pkgconf-bin{a} po-debconf{a} procps{a} rapidjson-dev{a} sensible-utils{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: bzip2-doc ca-certificates curl krb5-locales libarchive-cpio-perl libldap-common libltdl-dev libmail-sendmail-perl libsasl2-modules lynx psmisc publicsuffix wget 0 packages upgraded, 73 newly installed, 0 to remove and 0 not upgraded. Need to get 84.9 MB of archives. After unpacking 406 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main arm64 libproc2-0 arm64 2:4.0.4-4 [61.7 kB] Get: 2 http://deb.debian.org/debian trixie/main arm64 procps arm64 2:4.0.4-4 [869 kB] Get: 3 http://deb.debian.org/debian trixie/main arm64 sensible-utils all 0.0.22 [22.4 kB] Get: 4 http://deb.debian.org/debian trixie/main arm64 libmagic-mgc arm64 1:5.45-3 [314 kB] Get: 5 http://deb.debian.org/debian trixie/main arm64 libmagic1t64 arm64 1:5.45-3 [100 kB] Get: 6 http://deb.debian.org/debian trixie/main arm64 file arm64 1:5.45-3 [43.0 kB] Get: 7 http://deb.debian.org/debian trixie/main arm64 gettext-base arm64 0.21-14+b1 [160 kB] Get: 8 http://deb.debian.org/debian trixie/main arm64 libuchardet0 arm64 0.0.8-1+b1 [69.0 kB] Get: 9 http://deb.debian.org/debian trixie/main arm64 groff-base arm64 1.23.0-4 [1130 kB] Get: 10 http://deb.debian.org/debian trixie/main arm64 bsdextrautils arm64 2.40-8 [93.0 kB] Get: 11 http://deb.debian.org/debian trixie/main arm64 libpipeline1 arm64 1.5.7-2 [36.5 kB] Get: 12 http://deb.debian.org/debian trixie/main arm64 man-db arm64 2.12.1-1 [1394 kB] Get: 13 http://deb.debian.org/debian trixie/main arm64 m4 arm64 1.4.19-4 [277 kB] Get: 14 http://deb.debian.org/debian trixie/main arm64 autoconf all 2.71-3 [332 kB] Get: 15 http://deb.debian.org/debian trixie/main arm64 autotools-dev all 20220109.1 [51.6 kB] Get: 16 http://deb.debian.org/debian trixie/main arm64 automake all 1:1.16.5-1.3 [823 kB] Get: 17 http://deb.debian.org/debian trixie/main arm64 autopoint all 0.21-14 [496 kB] Get: 18 http://deb.debian.org/debian trixie/main arm64 libicu72 arm64 72.1-4+b1 [9224 kB] Get: 19 http://deb.debian.org/debian trixie/main arm64 libxml2 arm64 2.9.14+dfsg-1.3+b3 [624 kB] Get: 20 http://deb.debian.org/debian trixie/main arm64 libarchive13t64 arm64 3.7.2-2 [321 kB] Get: 21 http://deb.debian.org/debian trixie/main arm64 libbrotli1 arm64 1.1.0-2+b3 [295 kB] Get: 22 http://deb.debian.org/debian trixie/main arm64 libkrb5support0 arm64 1.20.1-6+b1 [33.0 kB] Get: 23 http://deb.debian.org/debian trixie/main arm64 libcom-err2 arm64 1.47.1~rc2-1 [22.5 kB] Get: 24 http://deb.debian.org/debian trixie/main arm64 libk5crypto3 arm64 1.20.1-6+b1 [80.5 kB] Get: 25 http://deb.debian.org/debian trixie/main arm64 libkeyutils1 arm64 1.6.3-3 [9112 B] Get: 26 http://deb.debian.org/debian trixie/main arm64 libkrb5-3 arm64 1.20.1-6+b1 [315 kB] Get: 27 http://deb.debian.org/debian trixie/main arm64 libgssapi-krb5-2 arm64 1.20.1-6+b1 [124 kB] Get: 28 http://deb.debian.org/debian trixie/main arm64 libsasl2-modules-db arm64 2.1.28+dfsg1-6 [20.1 kB] Get: 29 http://deb.debian.org/debian trixie/main arm64 libsasl2-2 arm64 2.1.28+dfsg1-6 [55.3 kB] Get: 30 http://deb.debian.org/debian trixie/main arm64 libldap-2.5-0 arm64 2.5.17+dfsg-1 [173 kB] Get: 31 http://deb.debian.org/debian trixie/main arm64 libnghttp2-14 arm64 1.61.0-1+b1 [71.0 kB] Get: 32 http://deb.debian.org/debian trixie/main arm64 libpsl5t64 arm64 0.21.2-1.1 [56.8 kB] Get: 33 http://deb.debian.org/debian trixie/main arm64 librtmp1 arm64 2.4+20151223.gitfa8646d.1-2+b4 [56.7 kB] Get: 34 http://deb.debian.org/debian trixie/main arm64 libssh2-1t64 arm64 1.11.0-4.1+b2 [207 kB] Get: 35 http://deb.debian.org/debian trixie/main arm64 libcurl4t64 arm64 8.7.1-5 [412 kB] Get: 36 http://deb.debian.org/debian trixie/main arm64 libexpat1 arm64 2.6.2-1 [88.7 kB] Get: 37 http://deb.debian.org/debian trixie/main arm64 libjsoncpp25 arm64 1.9.5-6+b2 [73.2 kB] Get: 38 http://deb.debian.org/debian trixie/main arm64 librhash0 arm64 1.4.3-3+b1 [127 kB] Get: 39 http://deb.debian.org/debian trixie/main arm64 libuv1t64 arm64 1.48.0-1.1 [142 kB] Get: 40 http://deb.debian.org/debian trixie/main arm64 cmake-data all 3.29.2-2 [2167 kB] Get: 41 http://deb.debian.org/debian trixie/main arm64 cmake arm64 3.29.2-2 [9059 kB] Get: 42 http://deb.debian.org/debian trixie/main arm64 libdebhelper-perl all 13.15.3 [88.0 kB] Get: 43 http://deb.debian.org/debian trixie/main arm64 libtool all 2.4.7-7 [517 kB] Get: 44 http://deb.debian.org/debian trixie/main arm64 dh-autoreconf all 20 [17.1 kB] Get: 45 http://deb.debian.org/debian trixie/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 46 http://deb.debian.org/debian trixie/main arm64 libsub-override-perl all 0.10-1 [10.6 kB] Get: 47 http://deb.debian.org/debian trixie/main arm64 libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get: 48 http://deb.debian.org/debian trixie/main arm64 dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get: 49 http://deb.debian.org/debian trixie/main arm64 libelf1t64 arm64 0.191-1+b1 [187 kB] Get: 50 http://deb.debian.org/debian trixie/main arm64 dwz arm64 0.15-1+b1 [102 kB] Get: 51 http://deb.debian.org/debian trixie/main arm64 gettext arm64 0.21-14+b1 [1249 kB] Get: 52 http://deb.debian.org/debian trixie/main arm64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 53 http://deb.debian.org/debian trixie/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 54 http://deb.debian.org/debian trixie/main arm64 debhelper all 13.15.3 [901 kB] Get: 55 http://deb.debian.org/debian trixie/main arm64 libbsd0 arm64 0.12.2-1 [129 kB] Get: 56 http://deb.debian.org/debian trixie/main arm64 libedit2 arm64 3.1-20230828-1+b1 [89.1 kB] Get: 57 http://deb.debian.org/debian trixie/main arm64 libz3-4 arm64 4.8.12-3.1+b2 [6508 kB] Get: 58 http://deb.debian.org/debian trixie/main arm64 libllvm16t64 arm64 1:16.0.6-27 [20.7 MB] Get: 59 http://deb.debian.org/debian trixie/main arm64 libclang-cpp16t64 arm64 1:16.0.6-27 [10.5 MB] Get: 60 http://deb.debian.org/debian trixie/main arm64 libclang1-16t64 arm64 1:16.0.6-27 [5932 kB] Get: 61 http://deb.debian.org/debian trixie/main arm64 libfmt9 arm64 9.1.0+ds1-2 [107 kB] Get: 62 http://deb.debian.org/debian trixie/main arm64 doxygen arm64 1.9.8+ds-2+b1 [4484 kB] Get: 63 http://deb.debian.org/debian trixie/main arm64 googletest all 1.14.0-1 [512 kB] Get: 64 http://deb.debian.org/debian trixie/main arm64 libbz2-dev arm64 1.0.8-5.1 [31.8 kB] Get: 65 http://deb.debian.org/debian trixie/main arm64 rapidjson-dev all 1.1.0+dfsg2-7.2 [97.8 kB] Get: 66 http://deb.debian.org/debian trixie/main arm64 libcereal-dev arm64 1.3.2+dfsg-5 [221 kB] Get: 67 http://deb.debian.org/debian trixie/main arm64 libgtest-dev arm64 1.14.0-1+b1 [241 kB] Get: 68 http://deb.debian.org/debian trixie/main arm64 libpkgconf3 arm64 1.8.1-1+b2 [35.3 kB] Get: 69 http://deb.debian.org/debian trixie/main arm64 zlib1g-dev arm64 1:1.3.dfsg-3.1 [915 kB] Get: 70 http://deb.debian.org/debian trixie/main arm64 libseqan3-dev all 3.3.0+ds-1 [758 kB] Get: 71 http://deb.debian.org/debian trixie/main arm64 pkgconf-bin arm64 1.8.1-1+b2 [29.3 kB] Get: 72 http://deb.debian.org/debian trixie/main arm64 pkgconf arm64 1.8.1-1+b2 [26.2 kB] Get: 73 http://deb.debian.org/debian trixie/main arm64 pkg-config arm64 1.8.1-1+b2 [14.0 kB] Fetched 84.9 MB in 1s (142 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libproc2-0:arm64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19744 files and directories currently installed.) Preparing to unpack .../00-libproc2-0_2%3a4.0.4-4_arm64.deb ... Unpacking libproc2-0:arm64 (2:4.0.4-4) ... Selecting previously unselected package procps. Preparing to unpack .../01-procps_2%3a4.0.4-4_arm64.deb ... Unpacking procps (2:4.0.4-4) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../02-sensible-utils_0.0.22_all.deb ... 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Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.13.1-1) ... Setting up gettext (0.21-14+b1) ... Setting up libgtest-dev:arm64 (1.14.0-1+b1) ... Setting up libtool (2.4.7-7) ... Setting up libedit2:arm64 (3.1-20230828-1+b1) ... Setting up libcereal-dev (1.3.2+dfsg-5) ... Setting up libldap-2.5-0:arm64 (2.5.17+dfsg-1) ... Setting up pkgconf:arm64 (1.8.1-1+b2) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up libllvm16t64:arm64 (1:16.0.6-27) ... Setting up dh-autoreconf (20) ... Setting up libgssapi-krb5-2:arm64 (1.20.1-6+b1) ... Setting up pkg-config:arm64 (1.8.1-1+b2) ... Setting up dh-strip-nondeterminism (1.13.1-1) ... Setting up groff-base (1.23.0-4) ... Setting up libarchive13t64:arm64 (3.7.2-2) ... Setting up libcurl4t64:arm64 (8.7.1-5) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libseqan3-dev (3.3.0+ds-1) ... Setting up libclang1-16t64 (1:16.0.6-27) ... Setting up man-db (2.12.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libclang-cpp16t64 (1:16.0.6-27) ... Setting up doxygen (1.9.8+ds-2+b1) ... Setting up cmake (3.29.2-2) ... Setting up debhelper (13.15.3) ... Processing triggers for libc-bin (2.38-10) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/seqan-needle-1.0.2+ds/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../seqan-needle_1.0.2+ds-2_source.changes dpkg-buildpackage: info: source package seqan-needle dpkg-buildpackage: info: source version 1.0.2+ds-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Komolehin Israel Timilehin dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 debian/rules clean dh clean dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf debian/rules override_dh_auto_configure make[1]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds' rm -Rf lib/seqan3 dh_auto_configure -- -DSEQAN3_NO_LEMON=OFF cd obj-aarch64-linux-gnu && DEB_PYTHON_INSTALL_LAYOUT=deb cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/aarch64-linux-gnu -DSEQAN3_NO_LEMON=OFF .. -- The C compiler identification is GNU 13.2.0 -- The CXX compiler identification is GNU 13.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Found OpenMP_C: -fopenmp (found version "4.5") -- Found OpenMP_CXX: -fopenmp (found version "4.5") -- Found OpenMP: TRUE (found version "4.5") -- You can run `make` to build the application. -- Found Doxygen: /usr/bin/doxygen -- You can run `make doc` to build api documentation. -- You can run `make test` to build and run tests. -- Configuring done (7.2s) -- Generating done (0.0s) CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY CMAKE_INSTALL_LIBDIR CMAKE_INSTALL_LOCALSTATEDIR CMAKE_INSTALL_RUNSTATEDIR CMAKE_INSTALL_SYSCONFDIR FETCHCONTENT_FULLY_DISCONNECTED SEQAN3_NO_LEMON -- Build files have been written to: /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu make[1]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds' debian/rules override_dh_auto_build-arch make[1]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds' dh_auto_build --arch cd obj-aarch64-linux-gnu && make -j12 "INSTALL=install --strip-program=true" VERBOSE=1 make[2]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/seqan-needle-1.0.2+ds -B/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/CMakeFiles /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[3]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' make -f src/CMakeFiles/needle_lib.dir/build.make src/CMakeFiles/needle_lib.dir/depend make[4]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-needle-1.0.2+ds /build/reproducible-path/seqan-needle-1.0.2+ds/src /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/src /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/src/CMakeFiles/needle_lib.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' make -f src/CMakeFiles/needle_lib.dir/build.make src/CMakeFiles/needle_lib.dir/build make[4]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' [ 20%] Building CXX object src/CMakeFiles/needle_lib.dir/ibf.cpp.o cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/build/reproducible-path/seqan-needle-1.0.2+ds/src/../include -I/build/reproducible-path/seqan-needle-1.0.2+ds/lib/robin-hood-hashing/src/include -isystem /usr/include/seqan3/submodules/sdsl-lite/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.2+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++20 -fopenmp -MD -MT src/CMakeFiles/needle_lib.dir/ibf.cpp.o -MF CMakeFiles/needle_lib.dir/ibf.cpp.o.d -o CMakeFiles/needle_lib.dir/ibf.cpp.o -c /build/reproducible-path/seqan-needle-1.0.2+ds/src/ibf.cpp [ 40%] Building CXX object src/CMakeFiles/needle_lib.dir/estimate.cpp.o cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/build/reproducible-path/seqan-needle-1.0.2+ds/src/../include -I/build/reproducible-path/seqan-needle-1.0.2+ds/lib/robin-hood-hashing/src/include -isystem /usr/include/seqan3/submodules/sdsl-lite/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.2+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++20 -fopenmp -MD -MT src/CMakeFiles/needle_lib.dir/estimate.cpp.o -MF CMakeFiles/needle_lib.dir/estimate.cpp.o.d -o CMakeFiles/needle_lib.dir/estimate.cpp.o -c /build/reproducible-path/seqan-needle-1.0.2+ds/src/estimate.cpp /build/reproducible-path/seqan-needle-1.0.2+ds/src/ibf.cpp: In function ‘void fill_hash_table_parallel(const min_arguments&, seqan3::sequence_file_input >&, robin_hood::unordered_node_map&, robin_hood::unordered_node_map&, robin_hood::unordered_set&, robin_hood::unordered_set&, bool, uint8_t)’: /build/reproducible-path/seqan-needle-1.0.2+ds/src/ibf.cpp:242:38: warning: narrowing conversion of ‘thread_count’ from ‘size_t’ {aka ‘long unsigned int’} to ‘ptrdiff_t’ {aka ‘long int’} [-Wnarrowing] 242 | seqan3::detail::latch sync_point{thread_count}; | ^~~~~~~~~~~~ /build/reproducible-path/seqan-needle-1.0.2+ds/src/ibf.cpp:243:40: warning: narrowing conversion of ‘thread_count’ from ‘size_t’ {aka ‘long unsigned int’} to ‘ptrdiff_t’ {aka ‘long int’} [-Wnarrowing] 243 | seqan3::detail::latch sync_point_2{thread_count}; | ^~~~~~~~~~~~ [ 60%] Linking CXX static library ../lib/libneedle_lib.a cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/src && /usr/bin/cmake -P CMakeFiles/needle_lib.dir/cmake_clean_target.cmake cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/needle_lib.dir/link.txt --verbose=1 /usr/bin/ar qc ../lib/libneedle_lib.a CMakeFiles/needle_lib.dir/ibf.cpp.o CMakeFiles/needle_lib.dir/estimate.cpp.o /usr/bin/ranlib ../lib/libneedle_lib.a make[4]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' [ 60%] Built target needle_lib make -f src/CMakeFiles/needle.dir/build.make src/CMakeFiles/needle.dir/depend make[4]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-needle-1.0.2+ds /build/reproducible-path/seqan-needle-1.0.2+ds/src /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/src /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/src/CMakeFiles/needle.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' make -f src/CMakeFiles/needle.dir/build.make src/CMakeFiles/needle.dir/build make[4]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' [ 80%] Building CXX object src/CMakeFiles/needle.dir/main.cpp.o cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/src && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/build/reproducible-path/seqan-needle-1.0.2+ds/src/../include -I/build/reproducible-path/seqan-needle-1.0.2+ds/lib/robin-hood-hashing/src/include -isystem /usr/include/seqan3/submodules/sdsl-lite/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.2+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++20 -fopenmp -MD -MT src/CMakeFiles/needle.dir/main.cpp.o -MF CMakeFiles/needle.dir/main.cpp.o.d -o CMakeFiles/needle.dir/main.cpp.o -c /build/reproducible-path/seqan-needle-1.0.2+ds/src/main.cpp [100%] Linking CXX executable ../bin/needle cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/needle.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.2+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now CMakeFiles/needle.dir/main.cpp.o -o ../bin/needle ../lib/libneedle_lib.a /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so -lrt /usr/lib/gcc/aarch64-linux-gnu/13/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a make[4]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' [100%] Built target needle make[3]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/CMakeFiles 0 make[2]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' obj-*/bin/needle --export-help man > debian/needle.1 obj-*/bin/needle count --export-help man > debian/needle-count.1 obj-*/bin/needle estimate --export-help man > debian/needle-estimate.1 obj-*/bin/needle ibf --export-help man > debian/needle-ibf.1 obj-*/bin/needle minimiser --export-help man > debian/needle-minimiser.1 make[1]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds' debian/rules override_dh_auto_build-indep make[1]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds' doxygen doc/doxygen_cfg warning: Tag 'HTML_TIMESTAMP' at line 220 of file 'doc/doxygen_cfg' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'FORMULA_TRANSPARENT' at line 256 of file 'doc/doxygen_cfg' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'LATEX_TIMESTAMP' at line 291 of file 'doc/doxygen_cfg' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'DOT_FONTNAME' at line 360 of file 'doc/doxygen_cfg' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'DOT_FONTSIZE' at line 361 of file 'doc/doxygen_cfg' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'DOT_TRANSPARENT' at line 389 of file 'doc/doxygen_cfg' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: tag INCLUDE_PATH: include path '${CMAKE_SOURCE_DIR}/include' does not exist warning: source '${CMAKE_SOURCE_DIR}/include' is not a readable file or directory... skipping. Doxygen version used: 1.9.8 Searching for include files... Searching for example files... Searching for images... Searching for dot files... Searching for msc files... Searching for dia files... Searching for files to exclude Searching INPUT for files to process... Searching for files in directory /build/reproducible-path/seqan-needle-1.0.2+ds/include Searching for files in directory /build/reproducible-path/seqan-needle-1.0.2+ds/src Reading and parsing tag files Parsing files Preprocessing /build/reproducible-path/seqan-needle-1.0.2+ds/include/estimate.h... Parsing file /build/reproducible-path/seqan-needle-1.0.2+ds/include/estimate.h... Preprocessing /build/reproducible-path/seqan-needle-1.0.2+ds/include/ibf.h... Parsing file /build/reproducible-path/seqan-needle-1.0.2+ds/include/ibf.h... Preprocessing /build/reproducible-path/seqan-needle-1.0.2+ds/include/shared.h... Parsing file /build/reproducible-path/seqan-needle-1.0.2+ds/include/shared.h... Preprocessing /build/reproducible-path/seqan-needle-1.0.2+ds/src/CMakeLists.txt... Parsing file /build/reproducible-path/seqan-needle-1.0.2+ds/src/CMakeLists.txt... Preprocessing /build/reproducible-path/seqan-needle-1.0.2+ds/src/estimate.cpp... Parsing file /build/reproducible-path/seqan-needle-1.0.2+ds/src/estimate.cpp... Preprocessing /build/reproducible-path/seqan-needle-1.0.2+ds/src/ibf.cpp... Parsing file /build/reproducible-path/seqan-needle-1.0.2+ds/src/ibf.cpp... Preprocessing /build/reproducible-path/seqan-needle-1.0.2+ds/src/main.cpp... Parsing file /build/reproducible-path/seqan-needle-1.0.2+ds/src/main.cpp... Reading /build/reproducible-path/seqan-needle-1.0.2+ds/LICENSE.md... Building macro definition list... Building group list... Building directory list... Building namespace list... Building file list... Building class list... Building concept list... Computing nesting relations for classes... Associating documentation with classes... Associating documentation with concepts... Associating documentation with modules... Building example list... Searching for enumerations... Searching for documented typedefs... Searching for members imported via using declarations... Searching for included using directives... Searching for documented variables... Building interface member list... Building member list... Searching for friends... Searching for documented defines... Computing class inheritance relations... Computing class usage relations... Flushing cached template relations that have become invalid... Computing class relations... Add enum values to enums... Searching for member function documentation... Creating members for template instances... Building page list... Search for main page... Computing page relations... Determining the scope of groups... Computing module relations... Sorting lists... Determining which enums are documented Computing member relations... Building full member lists recursively... Adding members to member groups. Computing member references... Inheriting documentation... Generating disk names... Adding source references... Adding xrefitems... Sorting member lists... Setting anonymous enum type... Computing dependencies between directories... Generating citations page... Counting members... Counting data structures... Resolving user defined references... Finding anchors and sections in the documentation... Transferring function references... Combining using relations... Adding members to index pages... Correcting members for VHDL... Computing tooltip texts... Generating style sheet... Generating search indices... Generating example documentation... Generating file sources... Generating code for file /build/reproducible-path/seqan-needle-1.0.2+ds/include/estimate.h... Generating code for file /build/reproducible-path/seqan-needle-1.0.2+ds/include/ibf.h... Generating code for file /build/reproducible-path/seqan-needle-1.0.2+ds/include/shared.h... Generating file documentation... Generating docs for file /build/reproducible-path/seqan-needle-1.0.2+ds/include/estimate.h... Generating docs for file /build/reproducible-path/seqan-needle-1.0.2+ds/include/ibf.h... Generating docs for file /build/reproducible-path/seqan-needle-1.0.2+ds/include/shared.h... Generating docs for file /build/reproducible-path/seqan-needle-1.0.2+ds/LICENSE.md... Generating docs for file /build/reproducible-path/seqan-needle-1.0.2+ds/src/CMakeLists.txt... Generating docs for file /build/reproducible-path/seqan-needle-1.0.2+ds/src/estimate.cpp... Generating docs for file /build/reproducible-path/seqan-needle-1.0.2+ds/src/ibf.cpp... Generating docs for file /build/reproducible-path/seqan-needle-1.0.2+ds/src/main.cpp... Generating page documentation... Generating docs for page md__2build_2reproducible-path_2seqan-needle-1_80_82_09ds_2_l_i_c_e_n_s_e... Generating group documentation... Generating class documentation... Generating docs for compound all_arguments... Generating docs for compound estimate_arguments... Generating docs for compound estimate_ibf_arguments... Generating docs for compound min_arguments... Generating docs for compound minimiser_arguments... Generating docs for compound my_traits... Generating docs for compound RandomGenerator... Generating concept documentation... Generating module documentation... Generating namespace documentation... Generating graph info page... Generating directory documentation... Generating index page... Generating page index... Generating topic index... Generating module index... Generating module member index... Generating namespace index... Generating namespace member index... Generating concept index... Generating annotated compound index... Generating alphabetical compound index... Generating hierarchical class index... Generating member index... Generating file index... Generating file member index... Generating example index... finalizing index lists... writing tag file... Running plantuml with JAVA... type lookup cache used 125/65536 hits=272 misses=132 symbol lookup cache used 135/65536 hits=325 misses=135 finished... make[1]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds' debian/rules override_dh_auto_test-indep make[1]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds' echo "Do Nothing" Do Nothing make[1]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds' dh_auto_test -Nseqan-needle-doc cd obj-aarch64-linux-gnu && make -j12 test ARGS\+=--verbose ARGS\+=-j12 make[1]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' Running tests... /usr/bin/ctest --force-new-ctest-process --verbose -j12 UpdateCTestConfiguration from :/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/DartConfiguration.tcl UpdateCTestConfiguration from :/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/DartConfiguration.tcl Test project /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu Constructing a list of tests Change Dir: '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test' Run Build Command(s): /usr/bin/cmake -E env VERBOSE=1 /usr/bin/gmake -f Makefile api_test gmake[2]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test' gmake[2]: warning: jobserver unavailable: using -j1. Add '+' to parent make rule. cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu && /usr/bin/gmake -f CMakeFiles/Makefile2 test/CMakeFiles/api_test.dir/rule gmake[3]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/seqan-needle-1.0.2+ds -B/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/CMakeFiles 15 /usr/bin/gmake -f CMakeFiles/Makefile2 test/CMakeFiles/api_test.dir/all gmake[4]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' /usr/bin/gmake -f src/CMakeFiles/needle_lib.dir/build.make src/CMakeFiles/needle_lib.dir/depend gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-needle-1.0.2+ds /build/reproducible-path/seqan-needle-1.0.2+ds/src /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/src /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/src/CMakeFiles/needle_lib.dir/DependInfo.cmake "--color=" Dependencies file "src/CMakeFiles/needle_lib.dir/estimate.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/src/CMakeFiles/needle_lib.dir/compiler_depend.internal". Dependencies file "src/CMakeFiles/needle_lib.dir/ibf.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/src/CMakeFiles/needle_lib.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target needle_lib gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' /usr/bin/gmake -f src/CMakeFiles/needle_lib.dir/build.make src/CMakeFiles/needle_lib.dir/build gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' gmake[5]: Nothing to be done for 'src/CMakeFiles/needle_lib.dir/build'. gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' [ 20%] Built target needle_lib /usr/bin/gmake -f test/api/CMakeFiles/minimiser_test.dir/build.make test/api/CMakeFiles/minimiser_test.dir/depend gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-needle-1.0.2+ds /build/reproducible-path/seqan-needle-1.0.2+ds/test/api /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/api /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/api/CMakeFiles/minimiser_test.dir/DependInfo.cmake "--color=" gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' /usr/bin/gmake -f test/api/CMakeFiles/minimiser_test.dir/build.make test/api/CMakeFiles/minimiser_test.dir/build gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' [ 26%] Building CXX object test/api/CMakeFiles/minimiser_test.dir/minimiser_test.cpp.o cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/api && /usr/bin/c++ -DBINDIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/bin/\" -DDATADIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/data/\" -DDATA_INPUT_DIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/test/data/\" -DOUTPUTDIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/output/\" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/build/reproducible-path/seqan-needle-1.0.2+ds/test/api/SEQAN3_CLONE_DIR-NOTFOUND/test/include -I/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/vendor/googletest/googletest/include -I/build/reproducible-path/seqan-needle-1.0.2+ds/src/../include -I/build/reproducible-path/seqan-needle-1.0.2+ds/lib/robin-hood-hashing/src/include -isystem /usr/include/seqan3/submodules/sdsl-lite/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.2+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++20 -fopenmp -MD -MT test/api/CMakeFiles/minimiser_test.dir/minimiser_test.cpp.o -MF CMakeFiles/minimiser_test.dir/minimiser_test.cpp.o.d -o CMakeFiles/minimiser_test.dir/minimiser_test.cpp.o -c /build/reproducible-path/seqan-needle-1.0.2+ds/test/api/minimiser_test.cpp [ 33%] Linking CXX executable minimiser_test cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/api && /usr/bin/cmake -E cmake_link_script CMakeFiles/minimiser_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.2+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now CMakeFiles/minimiser_test.dir/minimiser_test.cpp.o -o minimiser_test ../../lib/libneedle_lib.a -lgtest -lgtest_main /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so -lrt /usr/lib/gcc/aarch64-linux-gnu/13/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' [ 33%] Built target minimiser_test /usr/bin/gmake -f test/api/CMakeFiles/count_test.dir/build.make test/api/CMakeFiles/count_test.dir/depend gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-needle-1.0.2+ds /build/reproducible-path/seqan-needle-1.0.2+ds/test/api /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/api /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/api/CMakeFiles/count_test.dir/DependInfo.cmake "--color=" gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' /usr/bin/gmake -f test/api/CMakeFiles/count_test.dir/build.make test/api/CMakeFiles/count_test.dir/build gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' [ 40%] Building CXX object test/api/CMakeFiles/count_test.dir/count_test.cpp.o cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/api && /usr/bin/c++ -DBINDIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/bin/\" -DDATADIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/data/\" -DDATA_INPUT_DIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/test/data/\" -DOUTPUTDIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/output/\" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/build/reproducible-path/seqan-needle-1.0.2+ds/test/api/SEQAN3_CLONE_DIR-NOTFOUND/test/include -I/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/vendor/googletest/googletest/include -I/build/reproducible-path/seqan-needle-1.0.2+ds/src/../include -I/build/reproducible-path/seqan-needle-1.0.2+ds/lib/robin-hood-hashing/src/include -isystem /usr/include/seqan3/submodules/sdsl-lite/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.2+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++20 -fopenmp -MD -MT test/api/CMakeFiles/count_test.dir/count_test.cpp.o -MF CMakeFiles/count_test.dir/count_test.cpp.o.d -o CMakeFiles/count_test.dir/count_test.cpp.o -c /build/reproducible-path/seqan-needle-1.0.2+ds/test/api/count_test.cpp [ 46%] Linking CXX executable count_test cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/api && /usr/bin/cmake -E cmake_link_script CMakeFiles/count_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.2+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now CMakeFiles/count_test.dir/count_test.cpp.o -o count_test ../../lib/libneedle_lib.a -lgtest -lgtest_main /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so -lrt /usr/lib/gcc/aarch64-linux-gnu/13/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' [ 46%] Built target count_test /usr/bin/gmake -f test/api/CMakeFiles/insert_delete_test.dir/build.make test/api/CMakeFiles/insert_delete_test.dir/depend gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-needle-1.0.2+ds /build/reproducible-path/seqan-needle-1.0.2+ds/test/api /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/api /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/api/CMakeFiles/insert_delete_test.dir/DependInfo.cmake "--color=" gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' /usr/bin/gmake -f test/api/CMakeFiles/insert_delete_test.dir/build.make test/api/CMakeFiles/insert_delete_test.dir/build gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' [ 53%] Building CXX object test/api/CMakeFiles/insert_delete_test.dir/insert_delete_test.cpp.o cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/api && /usr/bin/c++ -DBINDIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/bin/\" -DDATADIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/data/\" -DDATA_INPUT_DIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/test/data/\" -DOUTPUTDIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/output/\" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/build/reproducible-path/seqan-needle-1.0.2+ds/test/api/SEQAN3_CLONE_DIR-NOTFOUND/test/include -I/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/vendor/googletest/googletest/include -I/build/reproducible-path/seqan-needle-1.0.2+ds/src/../include -I/build/reproducible-path/seqan-needle-1.0.2+ds/lib/robin-hood-hashing/src/include -isystem /usr/include/seqan3/submodules/sdsl-lite/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.2+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++20 -fopenmp -MD -MT test/api/CMakeFiles/insert_delete_test.dir/insert_delete_test.cpp.o -MF CMakeFiles/insert_delete_test.dir/insert_delete_test.cpp.o.d -o CMakeFiles/insert_delete_test.dir/insert_delete_test.cpp.o -c /build/reproducible-path/seqan-needle-1.0.2+ds/test/api/insert_delete_test.cpp [ 60%] Linking CXX executable insert_delete_test cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/api && /usr/bin/cmake -E cmake_link_script CMakeFiles/insert_delete_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.2+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now CMakeFiles/insert_delete_test.dir/insert_delete_test.cpp.o -o insert_delete_test ../../lib/libneedle_lib.a -lgtest -lgtest_main /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so -lrt /usr/lib/gcc/aarch64-linux-gnu/13/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' [ 60%] Built target insert_delete_test /usr/bin/gmake -f test/api/CMakeFiles/estimate_test.dir/build.make test/api/CMakeFiles/estimate_test.dir/depend gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-needle-1.0.2+ds /build/reproducible-path/seqan-needle-1.0.2+ds/test/api /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/api /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/api/CMakeFiles/estimate_test.dir/DependInfo.cmake "--color=" gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' /usr/bin/gmake -f test/api/CMakeFiles/estimate_test.dir/build.make test/api/CMakeFiles/estimate_test.dir/build gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' [ 66%] Building CXX object test/api/CMakeFiles/estimate_test.dir/estimate_test.cpp.o cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/api && /usr/bin/c++ -DBINDIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/bin/\" -DDATADIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/data/\" -DDATA_INPUT_DIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/test/data/\" -DOUTPUTDIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/output/\" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/build/reproducible-path/seqan-needle-1.0.2+ds/test/api/SEQAN3_CLONE_DIR-NOTFOUND/test/include -I/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/vendor/googletest/googletest/include -I/build/reproducible-path/seqan-needle-1.0.2+ds/src/../include -I/build/reproducible-path/seqan-needle-1.0.2+ds/lib/robin-hood-hashing/src/include -isystem /usr/include/seqan3/submodules/sdsl-lite/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.2+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++20 -fopenmp -MD -MT test/api/CMakeFiles/estimate_test.dir/estimate_test.cpp.o -MF CMakeFiles/estimate_test.dir/estimate_test.cpp.o.d -o CMakeFiles/estimate_test.dir/estimate_test.cpp.o -c /build/reproducible-path/seqan-needle-1.0.2+ds/test/api/estimate_test.cpp [ 73%] Linking CXX executable estimate_test cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/api && /usr/bin/cmake -E cmake_link_script CMakeFiles/estimate_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.2+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now CMakeFiles/estimate_test.dir/estimate_test.cpp.o -o estimate_test ../../lib/libneedle_lib.a -lgtest -lgtest_main /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so -lrt /usr/lib/gcc/aarch64-linux-gnu/13/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' [ 73%] Built target estimate_test /usr/bin/gmake -f test/api/CMakeFiles/ibf_test.dir/build.make test/api/CMakeFiles/ibf_test.dir/depend gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-needle-1.0.2+ds /build/reproducible-path/seqan-needle-1.0.2+ds/test/api /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/api /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/api/CMakeFiles/ibf_test.dir/DependInfo.cmake "--color=" gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' /usr/bin/gmake -f test/api/CMakeFiles/ibf_test.dir/build.make test/api/CMakeFiles/ibf_test.dir/build gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' [ 80%] Building CXX object test/api/CMakeFiles/ibf_test.dir/ibf_test.cpp.o cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/api && /usr/bin/c++ -DBINDIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/bin/\" -DDATADIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/data/\" -DDATA_INPUT_DIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/test/data/\" -DOUTPUTDIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/output/\" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/build/reproducible-path/seqan-needle-1.0.2+ds/test/api/SEQAN3_CLONE_DIR-NOTFOUND/test/include -I/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/vendor/googletest/googletest/include -I/build/reproducible-path/seqan-needle-1.0.2+ds/src/../include -I/build/reproducible-path/seqan-needle-1.0.2+ds/lib/robin-hood-hashing/src/include -isystem /usr/include/seqan3/submodules/sdsl-lite/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.2+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++20 -fopenmp -MD -MT test/api/CMakeFiles/ibf_test.dir/ibf_test.cpp.o -MF CMakeFiles/ibf_test.dir/ibf_test.cpp.o.d -o CMakeFiles/ibf_test.dir/ibf_test.cpp.o -c /build/reproducible-path/seqan-needle-1.0.2+ds/test/api/ibf_test.cpp [ 86%] Linking CXX executable ibf_test cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/api && /usr/bin/cmake -E cmake_link_script CMakeFiles/ibf_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.2+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now CMakeFiles/ibf_test.dir/ibf_test.cpp.o -o ibf_test ../../lib/libneedle_lib.a -lgtest -lgtest_main /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so -lrt /usr/lib/gcc/aarch64-linux-gnu/13/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' [ 86%] Built target ibf_test /usr/bin/gmake -f test/api/CMakeFiles/ibfmin_test.dir/build.make test/api/CMakeFiles/ibfmin_test.dir/depend gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-needle-1.0.2+ds /build/reproducible-path/seqan-needle-1.0.2+ds/test/api /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/api /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/api/CMakeFiles/ibfmin_test.dir/DependInfo.cmake "--color=" gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' /usr/bin/gmake -f test/api/CMakeFiles/ibfmin_test.dir/build.make test/api/CMakeFiles/ibfmin_test.dir/build gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' [ 93%] Building CXX object test/api/CMakeFiles/ibfmin_test.dir/ibfmin_test.cpp.o cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/api && /usr/bin/c++ -DBINDIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/bin/\" -DDATADIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/data/\" -DDATA_INPUT_DIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/test/data/\" -DOUTPUTDIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/output/\" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/build/reproducible-path/seqan-needle-1.0.2+ds/test/api/SEQAN3_CLONE_DIR-NOTFOUND/test/include -I/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/vendor/googletest/googletest/include -I/build/reproducible-path/seqan-needle-1.0.2+ds/src/../include -I/build/reproducible-path/seqan-needle-1.0.2+ds/lib/robin-hood-hashing/src/include -isystem /usr/include/seqan3/submodules/sdsl-lite/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.2+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++20 -fopenmp -MD -MT test/api/CMakeFiles/ibfmin_test.dir/ibfmin_test.cpp.o -MF CMakeFiles/ibfmin_test.dir/ibfmin_test.cpp.o.d -o CMakeFiles/ibfmin_test.dir/ibfmin_test.cpp.o -c /build/reproducible-path/seqan-needle-1.0.2+ds/test/api/ibfmin_test.cpp [100%] Linking CXX executable ibfmin_test cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/api && /usr/bin/cmake -E cmake_link_script CMakeFiles/ibfmin_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.2+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now CMakeFiles/ibfmin_test.dir/ibfmin_test.cpp.o -o ibfmin_test ../../lib/libneedle_lib.a -lgtest -lgtest_main /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so -lrt /usr/lib/gcc/aarch64-linux-gnu/13/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' [100%] Built target ibfmin_test /usr/bin/gmake -f test/CMakeFiles/api_test.dir/build.make test/CMakeFiles/api_test.dir/depend gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-needle-1.0.2+ds /build/reproducible-path/seqan-needle-1.0.2+ds/test /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/CMakeFiles/api_test.dir/DependInfo.cmake "--color=" gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' /usr/bin/gmake -f test/CMakeFiles/api_test.dir/build.make test/CMakeFiles/api_test.dir/build gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' gmake[5]: Nothing to be done for 'test/CMakeFiles/api_test.dir/build'. gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' [100%] Built target api_test gmake[4]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/CMakeFiles 0 gmake[3]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' gmake[2]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test' Change Dir: '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test' Run Build Command(s): /usr/bin/cmake -E env VERBOSE=1 /usr/bin/gmake -f Makefile cli_test gmake[2]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test' gmake[2]: warning: jobserver unavailable: using -j1. Add '+' to parent make rule. cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu && /usr/bin/gmake -f CMakeFiles/Makefile2 test/CMakeFiles/cli_test.dir/rule gmake[3]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/seqan-needle-1.0.2+ds -B/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/CMakeFiles 70 /usr/bin/gmake -f CMakeFiles/Makefile2 test/CMakeFiles/cli_test.dir/all gmake[4]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' /usr/bin/gmake -f test/CMakeFiles/datasource--exp_01.fasta.dir/build.make test/CMakeFiles/datasource--exp_01.fasta.dir/depend gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-needle-1.0.2+ds /build/reproducible-path/seqan-needle-1.0.2+ds/test /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/CMakeFiles/datasource--exp_01.fasta.dir/DependInfo.cmake "--color=" gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' /usr/bin/gmake -f test/CMakeFiles/datasource--exp_01.fasta.dir/build.make test/CMakeFiles/datasource--exp_01.fasta.dir/build gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' [ 1%] Creating directories for 'datasource--exp_01.fasta' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -Dcfgdir= -P /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/tmp/datasource--exp_01.fasta-mkdirs.cmake cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--exp_01.fasta-stamp/datasource--exp_01.fasta-mkdir [ 2%] Performing download step (verify) for 'datasource--exp_01.fasta' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src && /usr/bin/cmake -P /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--exp_01.fasta-stamp/verify-datasource--exp_01.fasta.cmake -- verifying file... file='/build/reproducible-path/seqan-needle-1.0.2+ds/test/data/exp_01.fasta' -- verifying file... done cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--exp_01.fasta-stamp/datasource--exp_01.fasta-download [ 4%] No update step for 'datasource--exp_01.fasta' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E echo_append cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--exp_01.fasta-stamp/datasource--exp_01.fasta-update [ 5%] No patch step for 'datasource--exp_01.fasta' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E echo_append cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--exp_01.fasta-stamp/datasource--exp_01.fasta-patch [ 7%] No configure step for 'datasource--exp_01.fasta' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--exp_01.fasta-build && /usr/bin/cmake -E echo_append cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--exp_01.fasta-build && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--exp_01.fasta-stamp/datasource--exp_01.fasta-configure [ 8%] No build step for 'datasource--exp_01.fasta' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--exp_01.fasta-build && /usr/bin/cmake -E echo_append cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--exp_01.fasta-build && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--exp_01.fasta-stamp/datasource--exp_01.fasta-build [ 10%] Performing install step for 'datasource--exp_01.fasta' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--exp_01.fasta-build && /usr/bin/cmake -E create_symlink /build/reproducible-path/seqan-needle-1.0.2+ds/test/data/exp_01.fasta /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/data/exp_01.fasta cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--exp_01.fasta-build && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--exp_01.fasta-stamp/datasource--exp_01.fasta-install [ 11%] No test step for 'datasource--exp_01.fasta' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--exp_01.fasta-build && /usr/bin/cmake -E echo_append cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--exp_01.fasta-build && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--exp_01.fasta-stamp/datasource--exp_01.fasta-test [ 12%] Completed 'datasource--exp_01.fasta' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E make_directory /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/CMakeFiles cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/CMakeFiles/datasource--exp_01.fasta-complete cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--exp_01.fasta-stamp/datasource--exp_01.fasta-done gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' [ 12%] Built target datasource--exp_01.fasta /usr/bin/gmake -f src/CMakeFiles/needle_lib.dir/build.make src/CMakeFiles/needle_lib.dir/depend gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-needle-1.0.2+ds /build/reproducible-path/seqan-needle-1.0.2+ds/src /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/src /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/src/CMakeFiles/needle_lib.dir/DependInfo.cmake "--color=" gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' /usr/bin/gmake -f src/CMakeFiles/needle_lib.dir/build.make src/CMakeFiles/needle_lib.dir/build gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' gmake[5]: Nothing to be done for 'src/CMakeFiles/needle_lib.dir/build'. gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' [ 17%] Built target needle_lib /usr/bin/gmake -f src/CMakeFiles/needle.dir/build.make src/CMakeFiles/needle.dir/depend gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-needle-1.0.2+ds /build/reproducible-path/seqan-needle-1.0.2+ds/src /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/src /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/src/CMakeFiles/needle.dir/DependInfo.cmake "--color=" Dependencies file "src/CMakeFiles/needle.dir/main.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/src/CMakeFiles/needle.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target needle gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' /usr/bin/gmake -f src/CMakeFiles/needle.dir/build.make src/CMakeFiles/needle.dir/build gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' gmake[5]: Nothing to be done for 'src/CMakeFiles/needle.dir/build'. gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' [ 20%] Built target needle /usr/bin/gmake -f test/cli/CMakeFiles/delete_options_test.dir/build.make test/cli/CMakeFiles/delete_options_test.dir/depend gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-needle-1.0.2+ds /build/reproducible-path/seqan-needle-1.0.2+ds/test/cli /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/cli /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/cli/CMakeFiles/delete_options_test.dir/DependInfo.cmake "--color=" gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' /usr/bin/gmake -f test/cli/CMakeFiles/delete_options_test.dir/build.make test/cli/CMakeFiles/delete_options_test.dir/build gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' [ 21%] Building CXX object test/cli/CMakeFiles/delete_options_test.dir/delete_options_test.cpp.o cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/cli && /usr/bin/c++ -DBINDIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/bin/\" -DDATADIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/data/\" -DDATA_INPUT_DIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/test/data/\" -DOUTPUTDIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/output/\" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/build/reproducible-path/seqan-needle-1.0.2+ds/test/cli/SEQAN3_CLONE_DIR-NOTFOUND/test/include -I/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/vendor/googletest/googletest/include -I/build/reproducible-path/seqan-needle-1.0.2+ds/src/../include -I/build/reproducible-path/seqan-needle-1.0.2+ds/lib/robin-hood-hashing/src/include -isystem /usr/include/seqan3/submodules/sdsl-lite/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.2+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++20 -fopenmp -MD -MT test/cli/CMakeFiles/delete_options_test.dir/delete_options_test.cpp.o -MF CMakeFiles/delete_options_test.dir/delete_options_test.cpp.o.d -o CMakeFiles/delete_options_test.dir/delete_options_test.cpp.o -c /build/reproducible-path/seqan-needle-1.0.2+ds/test/cli/delete_options_test.cpp [ 22%] Linking CXX executable delete_options_test cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/cli && /usr/bin/cmake -E cmake_link_script CMakeFiles/delete_options_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.2+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now CMakeFiles/delete_options_test.dir/delete_options_test.cpp.o -o delete_options_test ../../lib/libneedle_lib.a -lgtest -lgtest_main /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so -lrt /usr/lib/gcc/aarch64-linux-gnu/13/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' [ 22%] Built target delete_options_test /usr/bin/gmake -f test/cli/CMakeFiles/needle_options_test.dir/build.make test/cli/CMakeFiles/needle_options_test.dir/depend gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-needle-1.0.2+ds /build/reproducible-path/seqan-needle-1.0.2+ds/test/cli /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/cli /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/cli/CMakeFiles/needle_options_test.dir/DependInfo.cmake "--color=" gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' /usr/bin/gmake -f test/cli/CMakeFiles/needle_options_test.dir/build.make test/cli/CMakeFiles/needle_options_test.dir/build gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' [ 24%] Building CXX object test/cli/CMakeFiles/needle_options_test.dir/needle_options_test.cpp.o cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/cli && /usr/bin/c++ -DBINDIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/bin/\" -DDATADIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/data/\" -DDATA_INPUT_DIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/test/data/\" -DOUTPUTDIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/output/\" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/build/reproducible-path/seqan-needle-1.0.2+ds/test/cli/SEQAN3_CLONE_DIR-NOTFOUND/test/include -I/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/vendor/googletest/googletest/include -I/build/reproducible-path/seqan-needle-1.0.2+ds/src/../include -I/build/reproducible-path/seqan-needle-1.0.2+ds/lib/robin-hood-hashing/src/include -isystem /usr/include/seqan3/submodules/sdsl-lite/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.2+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++20 -fopenmp -MD -MT test/cli/CMakeFiles/needle_options_test.dir/needle_options_test.cpp.o -MF CMakeFiles/needle_options_test.dir/needle_options_test.cpp.o.d -o CMakeFiles/needle_options_test.dir/needle_options_test.cpp.o -c /build/reproducible-path/seqan-needle-1.0.2+ds/test/cli/needle_options_test.cpp [ 25%] Linking CXX executable needle_options_test cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/cli && /usr/bin/cmake -E cmake_link_script CMakeFiles/needle_options_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.2+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now CMakeFiles/needle_options_test.dir/needle_options_test.cpp.o -o needle_options_test ../../lib/libneedle_lib.a -lgtest -lgtest_main /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so -lrt /usr/lib/gcc/aarch64-linux-gnu/13/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' [ 25%] Built target needle_options_test /usr/bin/gmake -f test/CMakeFiles/datasource--mini_example.minimiser.dir/build.make test/CMakeFiles/datasource--mini_example.minimiser.dir/depend gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-needle-1.0.2+ds /build/reproducible-path/seqan-needle-1.0.2+ds/test /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/CMakeFiles/datasource--mini_example.minimiser.dir/DependInfo.cmake "--color=" gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' /usr/bin/gmake -f test/CMakeFiles/datasource--mini_example.minimiser.dir/build.make test/CMakeFiles/datasource--mini_example.minimiser.dir/build gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' [ 27%] Creating directories for 'datasource--mini_example.minimiser' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -Dcfgdir= -P /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/tmp/datasource--mini_example.minimiser-mkdirs.cmake cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_example.minimiser-stamp/datasource--mini_example.minimiser-mkdir [ 28%] Performing download step (verify) for 'datasource--mini_example.minimiser' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src && /usr/bin/cmake -P /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_example.minimiser-stamp/verify-datasource--mini_example.minimiser.cmake -- verifying file... file='/build/reproducible-path/seqan-needle-1.0.2+ds/test/data/mini_example.minimiser' -- verifying file... done cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_example.minimiser-stamp/datasource--mini_example.minimiser-download [ 30%] No update step for 'datasource--mini_example.minimiser' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E echo_append cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_example.minimiser-stamp/datasource--mini_example.minimiser-update [ 31%] No patch step for 'datasource--mini_example.minimiser' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E echo_append cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_example.minimiser-stamp/datasource--mini_example.minimiser-patch [ 32%] No configure step for 'datasource--mini_example.minimiser' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_example.minimiser-build && /usr/bin/cmake -E echo_append cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_example.minimiser-build && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_example.minimiser-stamp/datasource--mini_example.minimiser-configure [ 34%] No build step for 'datasource--mini_example.minimiser' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_example.minimiser-build && /usr/bin/cmake -E echo_append cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_example.minimiser-build && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_example.minimiser-stamp/datasource--mini_example.minimiser-build [ 35%] Performing install step for 'datasource--mini_example.minimiser' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_example.minimiser-build && /usr/bin/cmake -E create_symlink /build/reproducible-path/seqan-needle-1.0.2+ds/test/data/mini_example.minimiser /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/data/mini_example.minimiser cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_example.minimiser-build && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_example.minimiser-stamp/datasource--mini_example.minimiser-install [ 37%] No test step for 'datasource--mini_example.minimiser' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_example.minimiser-build && /usr/bin/cmake -E echo_append cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_example.minimiser-build && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_example.minimiser-stamp/datasource--mini_example.minimiser-test [ 38%] Completed 'datasource--mini_example.minimiser' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E make_directory /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/CMakeFiles cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/CMakeFiles/datasource--mini_example.minimiser-complete cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_example.minimiser-stamp/datasource--mini_example.minimiser-done gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' [ 38%] Built target datasource--mini_example.minimiser /usr/bin/gmake -f test/CMakeFiles/datasource--mini_example.fasta.dir/build.make test/CMakeFiles/datasource--mini_example.fasta.dir/depend gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-needle-1.0.2+ds /build/reproducible-path/seqan-needle-1.0.2+ds/test /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/CMakeFiles/datasource--mini_example.fasta.dir/DependInfo.cmake "--color=" gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' /usr/bin/gmake -f test/CMakeFiles/datasource--mini_example.fasta.dir/build.make test/CMakeFiles/datasource--mini_example.fasta.dir/build gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' [ 40%] Creating directories for 'datasource--mini_example.fasta' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -Dcfgdir= -P /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/tmp/datasource--mini_example.fasta-mkdirs.cmake cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_example.fasta-stamp/datasource--mini_example.fasta-mkdir [ 41%] Performing download step (verify) for 'datasource--mini_example.fasta' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src && /usr/bin/cmake -P /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_example.fasta-stamp/verify-datasource--mini_example.fasta.cmake -- verifying file... file='/build/reproducible-path/seqan-needle-1.0.2+ds/test/data/mini_example.fasta' -- verifying file... done cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_example.fasta-stamp/datasource--mini_example.fasta-download [ 42%] No update step for 'datasource--mini_example.fasta' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E echo_append cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_example.fasta-stamp/datasource--mini_example.fasta-update [ 44%] No patch step for 'datasource--mini_example.fasta' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E echo_append cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_example.fasta-stamp/datasource--mini_example.fasta-patch [ 45%] No configure step for 'datasource--mini_example.fasta' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_example.fasta-build && /usr/bin/cmake -E echo_append cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_example.fasta-build && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_example.fasta-stamp/datasource--mini_example.fasta-configure [ 47%] No build step for 'datasource--mini_example.fasta' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_example.fasta-build && /usr/bin/cmake -E echo_append cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_example.fasta-build && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_example.fasta-stamp/datasource--mini_example.fasta-build [ 47%] Performing install step for 'datasource--mini_example.fasta' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_example.fasta-build && /usr/bin/cmake -E create_symlink /build/reproducible-path/seqan-needle-1.0.2+ds/test/data/mini_example.fasta /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/data/mini_example.fasta cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_example.fasta-build && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_example.fasta-stamp/datasource--mini_example.fasta-install [ 48%] No test step for 'datasource--mini_example.fasta' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_example.fasta-build && /usr/bin/cmake -E echo_append cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_example.fasta-build && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_example.fasta-stamp/datasource--mini_example.fasta-test [ 50%] Completed 'datasource--mini_example.fasta' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E make_directory /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/CMakeFiles cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/CMakeFiles/datasource--mini_example.fasta-complete cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_example.fasta-stamp/datasource--mini_example.fasta-done gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' [ 50%] Built target datasource--mini_example.fasta /usr/bin/gmake -f test/cli/CMakeFiles/ibf_options_test.dir/build.make test/cli/CMakeFiles/ibf_options_test.dir/depend gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-needle-1.0.2+ds /build/reproducible-path/seqan-needle-1.0.2+ds/test/cli /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/cli /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/cli/CMakeFiles/ibf_options_test.dir/DependInfo.cmake "--color=" gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' /usr/bin/gmake -f test/cli/CMakeFiles/ibf_options_test.dir/build.make test/cli/CMakeFiles/ibf_options_test.dir/build gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' [ 51%] Building CXX object test/cli/CMakeFiles/ibf_options_test.dir/ibf_options_test.cpp.o cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/cli && /usr/bin/c++ -DBINDIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/bin/\" -DDATADIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/data/\" -DDATA_INPUT_DIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/test/data/\" -DOUTPUTDIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/output/\" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/build/reproducible-path/seqan-needle-1.0.2+ds/test/cli/SEQAN3_CLONE_DIR-NOTFOUND/test/include -I/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/vendor/googletest/googletest/include -I/build/reproducible-path/seqan-needle-1.0.2+ds/src/../include -I/build/reproducible-path/seqan-needle-1.0.2+ds/lib/robin-hood-hashing/src/include -isystem /usr/include/seqan3/submodules/sdsl-lite/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.2+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++20 -fopenmp -MD -MT test/cli/CMakeFiles/ibf_options_test.dir/ibf_options_test.cpp.o -MF CMakeFiles/ibf_options_test.dir/ibf_options_test.cpp.o.d -o CMakeFiles/ibf_options_test.dir/ibf_options_test.cpp.o -c /build/reproducible-path/seqan-needle-1.0.2+ds/test/cli/ibf_options_test.cpp [ 52%] Linking CXX executable ibf_options_test cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/cli && /usr/bin/cmake -E cmake_link_script CMakeFiles/ibf_options_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.2+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now CMakeFiles/ibf_options_test.dir/ibf_options_test.cpp.o -o ibf_options_test ../../lib/libneedle_lib.a -lgtest -lgtest_main /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so -lrt /usr/lib/gcc/aarch64-linux-gnu/13/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' [ 52%] Built target ibf_options_test /usr/bin/gmake -f test/cli/CMakeFiles/insert_options_test.dir/build.make test/cli/CMakeFiles/insert_options_test.dir/depend gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-needle-1.0.2+ds /build/reproducible-path/seqan-needle-1.0.2+ds/test/cli /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/cli /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/cli/CMakeFiles/insert_options_test.dir/DependInfo.cmake "--color=" gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' /usr/bin/gmake -f test/cli/CMakeFiles/insert_options_test.dir/build.make test/cli/CMakeFiles/insert_options_test.dir/build gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' [ 54%] Building CXX object test/cli/CMakeFiles/insert_options_test.dir/insert_options_test.cpp.o cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/cli && /usr/bin/c++ -DBINDIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/bin/\" -DDATADIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/data/\" -DDATA_INPUT_DIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/test/data/\" -DOUTPUTDIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/output/\" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/build/reproducible-path/seqan-needle-1.0.2+ds/test/cli/SEQAN3_CLONE_DIR-NOTFOUND/test/include -I/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/vendor/googletest/googletest/include -I/build/reproducible-path/seqan-needle-1.0.2+ds/src/../include -I/build/reproducible-path/seqan-needle-1.0.2+ds/lib/robin-hood-hashing/src/include -isystem /usr/include/seqan3/submodules/sdsl-lite/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.2+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++20 -fopenmp -MD -MT test/cli/CMakeFiles/insert_options_test.dir/insert_options_test.cpp.o -MF CMakeFiles/insert_options_test.dir/insert_options_test.cpp.o.d -o CMakeFiles/insert_options_test.dir/insert_options_test.cpp.o -c /build/reproducible-path/seqan-needle-1.0.2+ds/test/cli/insert_options_test.cpp [ 55%] Linking CXX executable insert_options_test cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/cli && /usr/bin/cmake -E cmake_link_script CMakeFiles/insert_options_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.2+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now CMakeFiles/insert_options_test.dir/insert_options_test.cpp.o -o insert_options_test ../../lib/libneedle_lib.a -lgtest -lgtest_main /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so -lrt /usr/lib/gcc/aarch64-linux-gnu/13/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' [ 55%] Built target insert_options_test /usr/bin/gmake -f test/cli/CMakeFiles/minimiser_options_test.dir/build.make test/cli/CMakeFiles/minimiser_options_test.dir/depend gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-needle-1.0.2+ds /build/reproducible-path/seqan-needle-1.0.2+ds/test/cli /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/cli /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/cli/CMakeFiles/minimiser_options_test.dir/DependInfo.cmake "--color=" gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' /usr/bin/gmake -f test/cli/CMakeFiles/minimiser_options_test.dir/build.make test/cli/CMakeFiles/minimiser_options_test.dir/build gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' [ 57%] Building CXX object test/cli/CMakeFiles/minimiser_options_test.dir/minimiser_options_test.cpp.o cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/cli && /usr/bin/c++ -DBINDIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/bin/\" -DDATADIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/data/\" -DDATA_INPUT_DIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/test/data/\" -DOUTPUTDIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/output/\" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/build/reproducible-path/seqan-needle-1.0.2+ds/test/cli/SEQAN3_CLONE_DIR-NOTFOUND/test/include -I/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/vendor/googletest/googletest/include -I/build/reproducible-path/seqan-needle-1.0.2+ds/src/../include -I/build/reproducible-path/seqan-needle-1.0.2+ds/lib/robin-hood-hashing/src/include -isystem /usr/include/seqan3/submodules/sdsl-lite/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.2+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++20 -fopenmp -MD -MT test/cli/CMakeFiles/minimiser_options_test.dir/minimiser_options_test.cpp.o -MF CMakeFiles/minimiser_options_test.dir/minimiser_options_test.cpp.o.d -o CMakeFiles/minimiser_options_test.dir/minimiser_options_test.cpp.o -c /build/reproducible-path/seqan-needle-1.0.2+ds/test/cli/minimiser_options_test.cpp [ 58%] Linking CXX executable minimiser_options_test cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/cli && /usr/bin/cmake -E cmake_link_script CMakeFiles/minimiser_options_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.2+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now CMakeFiles/minimiser_options_test.dir/minimiser_options_test.cpp.o -o minimiser_options_test ../../lib/libneedle_lib.a -lgtest -lgtest_main /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so -lrt /usr/lib/gcc/aarch64-linux-gnu/13/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' [ 58%] Built target minimiser_options_test /usr/bin/gmake -f test/CMakeFiles/datasource--mini_gen.fasta.dir/build.make test/CMakeFiles/datasource--mini_gen.fasta.dir/depend gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-needle-1.0.2+ds /build/reproducible-path/seqan-needle-1.0.2+ds/test /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/CMakeFiles/datasource--mini_gen.fasta.dir/DependInfo.cmake "--color=" gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' /usr/bin/gmake -f test/CMakeFiles/datasource--mini_gen.fasta.dir/build.make test/CMakeFiles/datasource--mini_gen.fasta.dir/build gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' [ 60%] Creating directories for 'datasource--mini_gen.fasta' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -Dcfgdir= -P /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/tmp/datasource--mini_gen.fasta-mkdirs.cmake cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_gen.fasta-stamp/datasource--mini_gen.fasta-mkdir [ 61%] Performing download step (verify) for 'datasource--mini_gen.fasta' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src && /usr/bin/cmake -P /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_gen.fasta-stamp/verify-datasource--mini_gen.fasta.cmake -- verifying file... file='/build/reproducible-path/seqan-needle-1.0.2+ds/test/data/mini_gen.fasta' -- verifying file... done cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_gen.fasta-stamp/datasource--mini_gen.fasta-download [ 62%] No update step for 'datasource--mini_gen.fasta' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E echo_append cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_gen.fasta-stamp/datasource--mini_gen.fasta-update [ 64%] No patch step for 'datasource--mini_gen.fasta' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E echo_append cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_gen.fasta-stamp/datasource--mini_gen.fasta-patch [ 65%] No configure step for 'datasource--mini_gen.fasta' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_gen.fasta-build && /usr/bin/cmake -E echo_append cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_gen.fasta-build && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_gen.fasta-stamp/datasource--mini_gen.fasta-configure [ 67%] No build step for 'datasource--mini_gen.fasta' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_gen.fasta-build && /usr/bin/cmake -E echo_append cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_gen.fasta-build && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_gen.fasta-stamp/datasource--mini_gen.fasta-build [ 68%] Performing install step for 'datasource--mini_gen.fasta' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_gen.fasta-build && /usr/bin/cmake -E create_symlink /build/reproducible-path/seqan-needle-1.0.2+ds/test/data/mini_gen.fasta /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/data/mini_gen.fasta cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_gen.fasta-build && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_gen.fasta-stamp/datasource--mini_gen.fasta-install [ 70%] No test step for 'datasource--mini_gen.fasta' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_gen.fasta-build && /usr/bin/cmake -E echo_append cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_gen.fasta-build && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_gen.fasta-stamp/datasource--mini_gen.fasta-test [ 71%] Completed 'datasource--mini_gen.fasta' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E make_directory /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/CMakeFiles cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/CMakeFiles/datasource--mini_gen.fasta-complete cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_gen.fasta-stamp/datasource--mini_gen.fasta-done gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' [ 71%] Built target datasource--mini_gen.fasta /usr/bin/gmake -f test/CMakeFiles/datasource--ibf_1.dir/build.make test/CMakeFiles/datasource--ibf_1.dir/depend gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-needle-1.0.2+ds /build/reproducible-path/seqan-needle-1.0.2+ds/test /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/CMakeFiles/datasource--ibf_1.dir/DependInfo.cmake "--color=" gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' /usr/bin/gmake -f test/CMakeFiles/datasource--ibf_1.dir/build.make test/CMakeFiles/datasource--ibf_1.dir/build gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' [ 72%] Creating directories for 'datasource--ibf_1' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -Dcfgdir= -P /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/tmp/datasource--ibf_1-mkdirs.cmake cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--ibf_1-stamp/datasource--ibf_1-mkdir [ 74%] Performing download step (verify) for 'datasource--ibf_1' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src && /usr/bin/cmake -P /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--ibf_1-stamp/verify-datasource--ibf_1.cmake -- verifying file... file='/build/reproducible-path/seqan-needle-1.0.2+ds/test/data/IBF_1' -- verifying file... done cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--ibf_1-stamp/datasource--ibf_1-download [ 75%] No update step for 'datasource--ibf_1' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E echo_append cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--ibf_1-stamp/datasource--ibf_1-update [ 77%] No patch step for 'datasource--ibf_1' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E echo_append cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--ibf_1-stamp/datasource--ibf_1-patch [ 78%] No configure step for 'datasource--ibf_1' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--ibf_1-build && /usr/bin/cmake -E echo_append cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--ibf_1-build && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--ibf_1-stamp/datasource--ibf_1-configure [ 80%] No build step for 'datasource--ibf_1' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--ibf_1-build && /usr/bin/cmake -E echo_append cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--ibf_1-build && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--ibf_1-stamp/datasource--ibf_1-build [ 81%] Performing install step for 'datasource--ibf_1' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--ibf_1-build && /usr/bin/cmake -E create_symlink /build/reproducible-path/seqan-needle-1.0.2+ds/test/data/IBF_1 /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/data/IBF_1 cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--ibf_1-build && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--ibf_1-stamp/datasource--ibf_1-install [ 82%] No test step for 'datasource--ibf_1' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--ibf_1-build && /usr/bin/cmake -E echo_append cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--ibf_1-build && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--ibf_1-stamp/datasource--ibf_1-test [ 84%] Completed 'datasource--ibf_1' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E make_directory /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/CMakeFiles cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/CMakeFiles/datasource--ibf_1-complete cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--ibf_1-stamp/datasource--ibf_1-done gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' [ 84%] Built target datasource--ibf_1 /usr/bin/gmake -f test/cli/CMakeFiles/estimate_options_test.dir/build.make test/cli/CMakeFiles/estimate_options_test.dir/depend gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-needle-1.0.2+ds /build/reproducible-path/seqan-needle-1.0.2+ds/test/cli /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/cli /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/cli/CMakeFiles/estimate_options_test.dir/DependInfo.cmake "--color=" gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' /usr/bin/gmake -f test/cli/CMakeFiles/estimate_options_test.dir/build.make test/cli/CMakeFiles/estimate_options_test.dir/build gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' [ 85%] Building CXX object test/cli/CMakeFiles/estimate_options_test.dir/estimate_options_test.cpp.o cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/cli && /usr/bin/c++ -DBINDIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/bin/\" -DDATADIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/data/\" -DDATA_INPUT_DIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/test/data/\" -DOUTPUTDIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/output/\" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/build/reproducible-path/seqan-needle-1.0.2+ds/test/cli/SEQAN3_CLONE_DIR-NOTFOUND/test/include -I/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/vendor/googletest/googletest/include -I/build/reproducible-path/seqan-needle-1.0.2+ds/src/../include -I/build/reproducible-path/seqan-needle-1.0.2+ds/lib/robin-hood-hashing/src/include -isystem /usr/include/seqan3/submodules/sdsl-lite/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.2+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++20 -fopenmp -MD -MT test/cli/CMakeFiles/estimate_options_test.dir/estimate_options_test.cpp.o -MF CMakeFiles/estimate_options_test.dir/estimate_options_test.cpp.o.d -o CMakeFiles/estimate_options_test.dir/estimate_options_test.cpp.o -c /build/reproducible-path/seqan-needle-1.0.2+ds/test/cli/estimate_options_test.cpp [ 87%] Linking CXX executable estimate_options_test cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/cli && /usr/bin/cmake -E cmake_link_script CMakeFiles/estimate_options_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.2+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now CMakeFiles/estimate_options_test.dir/estimate_options_test.cpp.o -o estimate_options_test ../../lib/libneedle_lib.a -lgtest -lgtest_main /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so -lrt /usr/lib/gcc/aarch64-linux-gnu/13/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' [ 87%] Built target estimate_options_test /usr/bin/gmake -f test/CMakeFiles/datasource--mini_gen.genome.dir/build.make test/CMakeFiles/datasource--mini_gen.genome.dir/depend gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-needle-1.0.2+ds /build/reproducible-path/seqan-needle-1.0.2+ds/test /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/CMakeFiles/datasource--mini_gen.genome.dir/DependInfo.cmake "--color=" gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' /usr/bin/gmake -f test/CMakeFiles/datasource--mini_gen.genome.dir/build.make test/CMakeFiles/datasource--mini_gen.genome.dir/build gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' [ 88%] Creating directories for 'datasource--mini_gen.genome' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -Dcfgdir= -P /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/tmp/datasource--mini_gen.genome-mkdirs.cmake cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_gen.genome-stamp/datasource--mini_gen.genome-mkdir [ 88%] Performing download step (verify) for 'datasource--mini_gen.genome' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src && /usr/bin/cmake -P /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_gen.genome-stamp/verify-datasource--mini_gen.genome.cmake -- verifying file... file='/build/reproducible-path/seqan-needle-1.0.2+ds/test/data/mini_gen.genome' -- verifying file... done cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_gen.genome-stamp/datasource--mini_gen.genome-download [ 90%] No update step for 'datasource--mini_gen.genome' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E echo_append cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_gen.genome-stamp/datasource--mini_gen.genome-update [ 91%] No patch step for 'datasource--mini_gen.genome' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E echo_append cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_gen.genome-stamp/datasource--mini_gen.genome-patch [ 92%] No configure step for 'datasource--mini_gen.genome' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_gen.genome-build && /usr/bin/cmake -E echo_append cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_gen.genome-build && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_gen.genome-stamp/datasource--mini_gen.genome-configure [ 94%] No build step for 'datasource--mini_gen.genome' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_gen.genome-build && /usr/bin/cmake -E echo_append cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_gen.genome-build && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_gen.genome-stamp/datasource--mini_gen.genome-build [ 95%] Performing install step for 'datasource--mini_gen.genome' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_gen.genome-build && /usr/bin/cmake -E create_symlink /build/reproducible-path/seqan-needle-1.0.2+ds/test/data/mini_gen.genome /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/data/mini_gen.genome cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_gen.genome-build && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_gen.genome-stamp/datasource--mini_gen.genome-install [ 97%] No test step for 'datasource--mini_gen.genome' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_gen.genome-build && /usr/bin/cmake -E echo_append cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_gen.genome-build && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_gen.genome-stamp/datasource--mini_gen.genome-test [ 98%] Completed 'datasource--mini_gen.genome' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E make_directory /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/CMakeFiles cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/CMakeFiles/datasource--mini_gen.genome-complete cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/_datasources/src/datasource--mini_gen.genome-stamp/datasource--mini_gen.genome-done gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' [ 98%] Built target datasource--mini_gen.genome /usr/bin/gmake -f test/cli/CMakeFiles/count_options_test.dir/build.make test/cli/CMakeFiles/count_options_test.dir/depend gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-needle-1.0.2+ds /build/reproducible-path/seqan-needle-1.0.2+ds/test/cli /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/cli /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/cli/CMakeFiles/count_options_test.dir/DependInfo.cmake "--color=" gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' /usr/bin/gmake -f test/cli/CMakeFiles/count_options_test.dir/build.make test/cli/CMakeFiles/count_options_test.dir/build gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' [ 98%] Building CXX object test/cli/CMakeFiles/count_options_test.dir/count_options_test.cpp.o cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/cli && /usr/bin/c++ -DBINDIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/bin/\" -DDATADIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/data/\" -DDATA_INPUT_DIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/test/data/\" -DOUTPUTDIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/output/\" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/build/reproducible-path/seqan-needle-1.0.2+ds/test/cli/SEQAN3_CLONE_DIR-NOTFOUND/test/include -I/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/vendor/googletest/googletest/include -I/build/reproducible-path/seqan-needle-1.0.2+ds/src/../include -I/build/reproducible-path/seqan-needle-1.0.2+ds/lib/robin-hood-hashing/src/include -isystem /usr/include/seqan3/submodules/sdsl-lite/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.2+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++20 -fopenmp -MD -MT test/cli/CMakeFiles/count_options_test.dir/count_options_test.cpp.o -MF CMakeFiles/count_options_test.dir/count_options_test.cpp.o.d -o CMakeFiles/count_options_test.dir/count_options_test.cpp.o -c /build/reproducible-path/seqan-needle-1.0.2+ds/test/cli/count_options_test.cpp [100%] Linking CXX executable count_options_test cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/cli && /usr/bin/cmake -E cmake_link_script CMakeFiles/count_options_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.2+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now CMakeFiles/count_options_test.dir/count_options_test.cpp.o -o count_options_test ../../lib/libneedle_lib.a -lgtest -lgtest_main /usr/lib/aarch64-linux-gnu/libz.so /usr/lib/aarch64-linux-gnu/libbz2.so -lrt /usr/lib/gcc/aarch64-linux-gnu/13/libgomp.so /usr/lib/aarch64-linux-gnu/libpthread.a gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' [100%] Built target count_options_test /usr/bin/gmake -f test/CMakeFiles/cli_test.dir/build.make test/CMakeFiles/cli_test.dir/depend gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-needle-1.0.2+ds /build/reproducible-path/seqan-needle-1.0.2+ds/test /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/CMakeFiles/cli_test.dir/DependInfo.cmake "--color=" gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' /usr/bin/gmake -f test/CMakeFiles/cli_test.dir/build.make test/CMakeFiles/cli_test.dir/build gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' gmake[5]: Nothing to be done for 'test/CMakeFiles/cli_test.dir/build'. gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' [100%] Built target cli_test gmake[4]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/CMakeFiles 0 gmake[3]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' gmake[2]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test' Done constructing a list of tests Updating test list for fixtures Added 0 tests to meet fixture requirements Checking test dependency graph... Checking test dependency graph end test 1 Start 1: test/api/count_test 1: Test command: /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/api/count_test 1: Working Directory: /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/api 1: Test timeout computed to be: 10000000 test 2 Start 2: test/api/insert_delete_test 2: Test command: /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/api/insert_delete_test 2: Working Directory: /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/api 2: Test timeout computed to be: 10000000 test 3 Start 3: test/api/estimate_test 3: Test command: /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/api/estimate_test 3: Working Directory: /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/api 3: Test timeout computed to be: 10000000 test 4 Start 4: test/api/ibf_test 4: Test command: /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/api/ibf_test 4: Working Directory: /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/api 4: Test timeout computed to be: 10000000 test 5 Start 5: test/api/ibfmin_test 5: Test command: /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/api/ibfmin_test 5: Working Directory: /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/api 5: Test timeout computed to be: 10000000 test 6 Start 6: test/api/minimiser_test 6: Test command: /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/api/minimiser_test 6: Working Directory: /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/api 6: Test timeout computed to be: 10000000 test 7 Start 7: test/cli/needle_options_test 7: Test command: /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/cli/needle_options_test 7: Working Directory: /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/cli 7: Test timeout computed to be: 10000000 test 8 Start 8: test/cli/ibf_options_test 8: Test command: /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/cli/ibf_options_test 8: Working Directory: /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/cli 8: Test timeout computed to be: 10000000 test 9 Start 9: test/cli/insert_options_test 9: Test command: /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/cli/insert_options_test 9: Working Directory: /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/cli 9: Test timeout computed to be: 10000000 test 10 Start 10: test/cli/minimiser_options_test 10: Test command: /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/cli/minimiser_options_test 10: Working Directory: /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/cli 10: Test timeout computed to be: 10000000 test 11 Start 11: test/cli/estimate_options_test 11: Test command: /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/cli/estimate_options_test 11: Working Directory: /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/cli 11: Test timeout computed to be: 10000000 test 12 Start 12: test/cli/count_options_test 12: Test command: /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/cli/count_options_test 12: Working Directory: /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/cli 12: Test timeout computed to be: 10000000 1: Running main() from ./googletest/src/gtest_main.cc 1: [==========] Running 4 tests from 2 test suites. 1: [----------] Global test environment set-up. 1: [----------] 3 tests from count 1: [ RUN ] count.small_example 1: [ OK ] count.small_example (2 ms) 1: [ RUN ] count.small_example_paired 1: [ OK ] count.small_example_paired (1 ms) 1: [ RUN ] count.small_example_exclude 1: [ OK ] count.small_example_exclude (0 ms) 1: [----------] 3 tests from count (4 ms total) 1: 1: [----------] 1 test from genome 1: [ RUN ] genome.small_example 1: [ OK ] genome.small_example (0 ms) 1: [----------] 1 test from genome (0 ms total) 1: 1: [----------] Global test environment tear-down 1: [==========] 4 tests from 2 test suites ran. (4 ms total) 1: [ PASSED ] 4 tests. 2: Running main() from ./googletest/src/gtest_main.cc 2: [==========] Running 9 tests from 2 test suites. 2: [----------] Global test environment set-up. 2: [----------] 1 test from delete 2: [ RUN ] delete.no_given_thresholds 2: [ OK ] delete.no_given_thresholds (2 ms) 2: [----------] 1 test from delete (2 ms total) 2: 2: [----------] 8 tests from insert 2: [ RUN ] insert.ibf 2: [ OK ] insert.ibf (1 ms) 2: [ RUN ] insert.ibf_no_given_thresholds 2: [ OK ] insert.ibf_no_given_thresholds (0 ms) 2: [ RUN ] insert.ibf_delete 2: [ OK ] insert.ibf_delete (1 ms) 2: [ RUN ] insert.ibf_delete_no_given_threshold 2: [ OK ] insert.ibf_delete_no_given_threshold (2 ms) 2: [ RUN ] insert.ibfmin 2: [ OK ] insert.ibfmin (1 ms) 2: [ RUN ] insert.ibfmin_delete 2: [ OK ] insert.ibfmin_delete (0 ms) 2: [ RUN ] insert.ibfmin_no_given_thresholds 2: [ OK ] insert.ibfmin_no_given_thresholds (0 ms) 2: [ RUN ] insert.delete_ibfmin_no_given_thresholds 2: [ OK ] insert.delete_ibfmin_no_given_thresholds (0 ms) 2: [----------] 8 tests from insert (9 ms total) 2: 2: [----------] Global test environment tear-down 2: [==========] 9 tests from 2 test suites ran. (13 ms total) 2: [ PASSED ] 9 tests. 3: Running main() from ./googletest/src/gtest_main.cc 3: [==========] Running 10 tests from 1 test suite. 3: [----------] Global test environment set-up. 3: [----------] 10 tests from estimate 3: [ RUN ] estimate.small_example 3: [ OK ] estimate.small_example (2 ms) 3: [ RUN ] estimate.small_example_uncompressed 3: [ OK ] estimate.small_example_uncompressed (0 ms) 3: [ RUN ] estimate.small_example_gene_not_found 3: [ OK ] estimate.small_example_gene_not_found (1 ms) 3: [ RUN ] estimate.small_example_different_expressions_per_level 3: [ OK ] estimate.small_example_different_expressions_per_level (1 ms) 3: [ RUN ] estimate.small_example_different_expressions_per_level_normalization_1 3: [ OK ] estimate.small_example_different_expressions_per_level_normalization_1 (1 ms) 3: [ RUN ] estimate.small_example_different_expressions_per_level_normalization_1_uncompressed 3: [ OK ] estimate.small_example_different_expressions_per_level_normalization_1_uncompressed (0 ms) 3: [ RUN ] estimate.example 4: Running main() from ./googletest/src/gtest_main.cc 4: [==========] Running 8 tests from 1 test suite. 4: [----------] Global test environment set-up. 4: [----------] 8 tests from ibf 4: [ RUN ] ibf.given_expression_thresholds 4: [ OK ] ibf.given_expression_thresholds (1 ms) 4: [ RUN ] ibf.given_expression_thresholds_include_file 4: [ OK ] ibf.given_expression_thresholds_include_file (1 ms) 4: [ RUN ] ibf.given_expression_thresholds_exclude_file 4: [ OK ] ibf.given_expression_thresholds_exclude_file (0 ms) 4: [ RUN ] ibf.no_given_expression_thresholds 4: [ OK ] ibf.no_given_expression_thresholds (0 ms) 4: [ RUN ] ibf.expression_thresholds_by_genome 4: [ OK ] ibf.expression_thresholds_by_genome (0 ms) 4: [ RUN ] ibf.throws 4: [ OK ] ibf.throws (0 ms) 4: [ RUN ] ibf.given_cutoffs 4: [ OK ] ibf.given_cutoffs (0 ms) 4: [ RUN ] ibf.different_file_sizes 5: Running main() from ./googletest/src/gtest_main.cc 5: [==========] Running 4 tests from 1 test suite. 5: [----------] Global test environment set-up. 5: [----------] 4 tests from ibfmin 5: [ RUN ] ibfmin.given_expression_thresholds 5: [ OK ] ibfmin.given_expression_thresholds (0 ms) 5: [ RUN ] ibfmin.no_given_expression_thresholds 5: [ OK ] ibfmin.no_given_expression_thresholds (0 ms) 5: [ RUN ] ibfmin.expression_thresholds_by_genome 5: [ OK ] ibfmin.expression_thresholds_by_genome (1 ms) 5: [ RUN ] ibfmin.different_shape 5: [ OK ] ibfmin.different_shape (0 ms) 5: [----------] 4 tests from ibfmin (3 ms total) 5: 5: [----------] Global test environment tear-down 5: [==========] 4 tests from 1 test suite ran. (3 ms total) 5: [ PASSED ] 4 tests. 6: Running main() from ./googletest/src/gtest_main.cc 6: [==========] Running 8 tests from 1 test suite. 6: [----------] Global test environment set-up. 6: [----------] 8 tests from minimiser 6: [ RUN ] minimiser.small_example 6: [ OK ] minimiser.small_example (2 ms) 6: [ RUN ] minimiser.small_example_different_shape 6: [ OK ] minimiser.small_example_different_shape (0 ms) 6: [ RUN ] minimiser.small_example_samplewise 6: [ OK ] minimiser.small_example_samplewise (0 ms) 6: [ RUN ] minimiser.cutoff_by_filesize 6: [ OK ] minimiser.cutoff_by_filesize (0 ms) 6: [ RUN ] minimiser.small_example_two_threads 6: [ OK ] minimiser.small_example_two_threads (2 ms) 6: [ RUN ] minimiser.small_example_include 6: [ OK ] minimiser.small_example_include (0 ms) 6: [ RUN ] minimiser.small_example_exclude 6: [ OK ] minimiser.small_example_exclude (0 ms) 6: [ RUN ] minimiser.small_example_shape 6: [ OK ] minimiser.small_example_shape (0 ms) 6: [----------] 8 tests from minimiser (7 ms total) 6: 6: [----------] Global test environment tear-down 6: [==========] 8 tests from 1 test suite ran. (7 ms total) 6: [ PASSED ] 8 tests. 7: Running main() from ./googletest/src/gtest_main.cc 7: [==========] Running 2 tests from 1 test suite. 7: [----------] Global test environment set-up. 7: [----------] 2 tests from needle_options_test 7: [ RUN ] needle_options_test.no_options 7: [ OK ] needle_options_test.no_options (6 ms) 7: [ RUN ] needle_options_test.fail_no_argument 7: [ OK ] needle_options_test.fail_no_argument (10 ms) 7: [----------] 2 tests from needle_options_test (17 ms total) 7: 7: [----------] Global test environment tear-down 7: [==========] 2 tests from 1 test suite ran. (17 ms total) 7: [ PASSED ] 2 tests. 8: Running main() from ./googletest/src/gtest_main.cc 8: [==========] Running 19 tests from 1 test suite. 8: [----------] Global test environment set-up. 8: [----------] 19 tests from ibf_options_test 8: [ RUN ] ibf_options_test.ibf_no_options 8: [ OK ] ibf_options_test.ibf_no_options (5 ms) 8: [ RUN ] ibf_options_test.ibf_fail_no_argument 8: [ OK ] ibf_options_test.ibf_fail_no_argument (7 ms) 8: [ RUN ] ibf_options_test.ibf_fail_contradiction 8: [ OK ] ibf_options_test.ibf_fail_contradiction (7 ms) 8: [ RUN ] ibf_options_test.ibf_fail_contradiction2 8: [ OK ] ibf_options_test.ibf_fail_contradiction2 (7 ms) 8: [ RUN ] ibf_options_test.ibf_fail_no_fpr 9: Running main() from ./googletest/src/gtest_main.cc 9: [==========] Running 3 tests from 1 test suite. 9: [----------] Global test environment set-up. 9: [----------] 3 tests from insert_options_test 9: [ RUN ] insert_options_test.insert_no_options 9: [ OK ] insert_options_test.insert_no_options (7 ms) 9: [ RUN ] insert_options_test.insert_fail_no_argument 9: [ OK ] insert_options_test.insert_fail_no_argument (7 ms) 9: [ RUN ] insert_options_test.with_argument 10: Running main() from ./googletest/src/gtest_main.cc 10: [==========] Running 8 tests from 1 test suite. 10: [----------] Global test environment set-up. 10: [----------] 8 tests from minimiser_options_test 10: [ RUN ] minimiser_options_test.no_options 10: [ OK ] minimiser_options_test.no_options (6 ms) 10: [ RUN ] minimiser_options_test.fail_no_argument 10: [ OK ] minimiser_options_test.fail_no_argument (6 ms) 10: [ RUN ] minimiser_options_test.with_arguments 11: Running main() from ./googletest/src/gtest_main.cc 11: [==========] Running 5 tests from 1 test suite. 11: [----------] Global test environment set-up. 11: [----------] 5 tests from estimate_options_test 11: [ RUN ] estimate_options_test.no_options 1/13 Test #1: test/api/count_test ............... Passed 0.06 sec 2/13 Test #2: test/api/insert_delete_test ....... Passed 0.06 sec 3/13 Test #5: test/api/ibfmin_test .............. Passed 0.05 sec 4/13 Test #6: test/api/minimiser_test ........... Passed 0.04 sec 5/13 Test #7: test/cli/needle_options_test ...... Passed 0.04 sec test 13 Start 13: test/cli/delete_options_test 13: Test command: /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/cli/delete_options_test 13: Working Directory: /build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu/test/cli 13: Test timeout computed to be: 10000000 8: [ OK ] ibf_options_test.ibf_fail_no_fpr (7 ms) 8: [ RUN ] ibf_options_test.ibf_fail_incorrect_number_of_fprs 8: [ OK ] ibf_options_test.ibf_fail_incorrect_number_of_fprs (5 ms) 8: [ RUN ] ibf_options_test.ibf_with_argument 10: [ OK ] minimiser_options_test.with_arguments (28 ms) 10: [ RUN ] minimiser_options_test.cutoff 11: [ OK ] estimate_options_test.no_options (15 ms) 11: [ RUN ] estimate_options_test.fail_no_argument 11: [ OK ] estimate_options_test.fail_no_argument (6 ms) 11: [ RUN ] estimate_options_test.with_argument 12: Running main() from ./googletest/src/gtest_main.cc 12: [==========] Running 8 tests from 2 test suites. 12: [----------] Global test environment set-up. 12: [----------] 5 tests from count_options_test 12: [ RUN ] count_options_test.no_options 12: [ OK ] count_options_test.no_options (8 ms) 12: [ RUN ] count_options_test.fail_no_argument 12: [ OK ] count_options_test.fail_no_argument (7 ms) 12: [ RUN ] count_options_test.with_arguments 13: Running main() from ./googletest/src/gtest_main.cc 13: [==========] Running 2 tests from 1 test suite. 13: [----------] Global test environment set-up. 13: [----------] 2 tests from delete_options_test 13: [ RUN ] delete_options_test.delete_no_options 12: [ OK ] count_options_test.with_arguments (11 ms) 12: [ RUN ] count_options_test.multithreads 13: [ OK ] delete_options_test.delete_no_options (9 ms) 13: [ RUN ] delete_options_test.with_argument 12: [ OK ] count_options_test.multithreads (10 ms) 12: [ RUN ] count_options_test.paired 12: [ OK ] count_options_test.paired (13 ms) 12: [----------] 5 tests from count_options_test (51 ms total) 12: 12: [----------] 3 tests from genome_options_test 12: [ RUN ] genome_options_test.no_options 10: [ OK ] minimiser_options_test.cutoff (31 ms) 10: [ RUN ] minimiser_options_test.multiple_sample 12: [ OK ] genome_options_test.no_options (8 ms) 12: [ RUN ] genome_options_test.fail_no_argument 12: [ OK ] genome_options_test.fail_no_argument (9 ms) 12: [ RUN ] genome_options_test.with_arguments 10: [ OK ] minimiser_options_test.multiple_sample (27 ms) 10: [ RUN ] minimiser_options_test.multithreads 12: [ OK ] genome_options_test.with_arguments (23 ms) 12: [----------] 3 tests from genome_options_test (41 ms total) 12: 12: [----------] Global test environment tear-down 12: [==========] 8 tests from 2 test suites ran. (92 ms total) 12: [ PASSED ] 8 tests. 6/13 Test #12: test/cli/count_options_test ....... Passed 0.10 sec 10: [ OK ] minimiser_options_test.multithreads (11 ms) 10: [ RUN ] minimiser_options_test.paired 10: [ OK ] minimiser_options_test.paired (29 ms) 10: [ RUN ] minimiser_options_test.invalid_argument 10: [ OK ] minimiser_options_test.invalid_argument (4 ms) 10: [----------] 8 tests from minimiser_options_test (147 ms total) 10: 10: [----------] Global test environment tear-down 10: [==========] 8 tests from 1 test suite ran. (147 ms total) 10: [ PASSED ] 8 tests. 7/13 Test #10: test/cli/minimiser_options_test ... Passed 0.15 sec 4: [ OK ] ibf.different_file_sizes (1280 ms) 4: [----------] 8 tests from ibf (1285 ms total) 4: 4: [----------] Global test environment tear-down 4: [==========] 8 tests from 1 test suite ran. (1286 ms total) 4: [ PASSED ] 8 tests. 8/13 Test #4: test/api/ibf_test ................. Passed 1.29 sec 8: [ OK ] ibf_options_test.ibf_with_argument (1407 ms) 8: [ RUN ] ibf_options_test.ibf_with_argument_with_options 3: [ OK ] estimate.example (2164 ms) 3: [ RUN ] estimate.example_multiple_threads 11: [ OK ] estimate_options_test.with_argument (2485 ms) 11: [ RUN ] estimate_options_test.with_argument_normalization_method 9: [ OK ] insert_options_test.with_argument (2546 ms) 9: [----------] 3 tests from insert_options_test (2561 ms total) 9: 9: [----------] Global test environment tear-down 9: [==========] 3 tests from 1 test suite ran. (2561 ms total) 9: [ PASSED ] 3 tests. 9/13 Test #9: test/cli/insert_options_test ...... Passed 2.57 sec 8: [ OK ] ibf_options_test.ibf_with_argument_with_options (1191 ms) 8: [ RUN ] ibf_options_test.ibf_with_argument_with_userdefined_shape 8: [ OK ] ibf_options_test.ibf_with_argument_with_userdefined_shape (1180 ms) 8: [ RUN ] ibf_options_test.ibfmin_no_options 8: [ OK ] ibf_options_test.ibfmin_no_options (5 ms) 8: [ RUN ] ibf_options_test.ibfmin_fail_no_argument 8: [ OK ] ibf_options_test.ibfmin_fail_no_argument (5 ms) 8: [ RUN ] ibf_options_test.ibfmin_fail_contradiction 8: [ OK ] ibf_options_test.ibfmin_fail_contradiction (6 ms) 8: [ RUN ] ibf_options_test.ibfmin_fail_contradiction2 8: [ OK ] ibf_options_test.ibfmin_fail_contradiction2 (6 ms) 8: [ RUN ] ibf_options_test.ibfmin_fail_no_fpr 8: [ OK ] ibf_options_test.ibfmin_fail_no_fpr (6 ms) 8: [ RUN ] ibf_options_test.ibfmin_fail_incorrect_number_of_fprs 8: [ OK ] ibf_options_test.ibfmin_fail_incorrect_number_of_fprs (6 ms) 8: [ RUN ] ibf_options_test.ibfmin_with_argument 8: [ OK ] ibf_options_test.ibfmin_with_argument (7 ms) 8: [ RUN ] ibf_options_test.compressed 8: [ OK ] ibf_options_test.compressed (6 ms) 8: [ RUN ] ibf_options_test.more_hash_functions 8: [ OK ] ibf_options_test.more_hash_functions (6 ms) 8: [ RUN ] ibf_options_test.expression_thresholds 8: [ OK ] ibf_options_test.expression_thresholds (6 ms) 8: [----------] 19 tests from ibf_options_test (3885 ms total) 8: 8: [----------] Global test environment tear-down 8: [==========] 19 tests from 1 test suite ran. (3885 ms total) 8: [ PASSED ] 19 tests. 10/13 Test #8: test/cli/ibf_options_test ......... Passed 3.90 sec 3: [ OK ] estimate.example_multiple_threads (1819 ms) 3: [ RUN ] estimate.example_different_expressions_per_level 13: [ OK ] delete_options_test.with_argument (3986 ms) 13: [----------] 2 tests from delete_options_test (3995 ms total) 13: 13: [----------] Global test environment tear-down 13: [==========] 2 tests from 1 test suite ran. (3995 ms total) 13: [ PASSED ] 2 tests. 11/13 Test #13: test/cli/delete_options_test ...... Passed 4.02 sec 11: [ OK ] estimate_options_test.with_argument_normalization_method (1948 ms) 11: [ RUN ] estimate_options_test.with_argument_out 3: [ OK ] estimate.example_different_expressions_per_level (984 ms) 3: [ RUN ] estimate.example_different_expressions_per_level_multiple_threads 3: [ OK ] estimate.example_different_expressions_per_level_multiple_threads (929 ms) 3: [----------] 10 tests from estimate (5907 ms total) 3: 3: [----------] Global test environment tear-down 3: [==========] 10 tests from 1 test suite ran. (5907 ms total) 3: [ PASSED ] 10 tests. 12/13 Test #3: test/api/estimate_test ............ Passed 5.91 sec 11: [ OK ] estimate_options_test.with_argument_out (1865 ms) 11: [----------] 5 tests from estimate_options_test (6322 ms total) 11: 11: [----------] Global test environment tear-down 11: [==========] 5 tests from 1 test suite ran. (6322 ms total) 11: [ PASSED ] 5 tests. 13/13 Test #11: test/cli/estimate_options_test .... Passed 6.33 sec 100% tests passed, 0 tests failed out of 13 Total Test time (real) = 194.46 sec make[1]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-aarch64-linux-gnu' create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install dh_install dh_installdocs dh_installchangelogs dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'seqan-needle' in '../seqan-needle_1.0.2+ds-2_arm64.deb'. dpkg-deb: building package 'seqan-needle-dbgsym' in '../seqan-needle-dbgsym_1.0.2+ds-2_arm64.deb'. dpkg-deb: building package 'seqan-needle-doc' in '../seqan-needle-doc_1.0.2+ds-2_all.deb'. dpkg-genbuildinfo --build=binary -O../seqan-needle_1.0.2+ds-2_arm64.buildinfo dpkg-genchanges --build=binary -O../seqan-needle_1.0.2+ds-2_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/1950830 and its subdirectories I: Current time: Sun Jun 15 08:36:25 -12 2025 I: pbuilder-time-stamp: 1750019785 Mon May 13 14:13:28 UTC 2024 I: 1st build successful. Starting 2nd build on remote node codethink03-arm64.debian.net. Mon May 13 14:13:28 UTC 2024 I: Preparing to do remote build '2' on codethink03-arm64.debian.net. Mon May 13 14:31:04 UTC 2024 I: Deleting $TMPDIR on codethink03-arm64.debian.net. Mon May 13 14:31:05 UTC 2024 I: seqan-needle_1.0.2+ds-2_arm64.changes: Format: 1.8 Date: Mon, 08 Jan 2024 11:38:37 +0100 Source: seqan-needle Binary: seqan-needle seqan-needle-dbgsym seqan-needle-doc Architecture: arm64 all Version: 1.0.2+ds-2 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Komolehin Israel Timilehin Description: seqan-needle - pre-filter for the counting of very large collections of nucleoti seqan-needle-doc - HTML documentation for seqan-needle and its APIs Closes: 1048377 Changes: seqan-needle (1.0.2+ds-2) unstable; urgency=medium . * Team upload. . [ Michael R. Crusoe ] * d/clean: remove HTML build of the documentation. Closes: #1048377 * corrected some patch metadata. . [ Komolehin Israel Timilehin ] * Added Autopkgtest Checksums-Sha1: 0e5b9123cafb0502f68f6cd5be44294b35f426ec 6422704 seqan-needle-dbgsym_1.0.2+ds-2_arm64.deb 78e841825d55f26afa843eb2b1961971940f1687 115368 seqan-needle-doc_1.0.2+ds-2_all.deb 3c900ba66731c29cdab650c4646514505d5725fd 7020 seqan-needle_1.0.2+ds-2_arm64.buildinfo 18a365c9ad41b3c0a8ce1c66233953647578a74f 302652 seqan-needle_1.0.2+ds-2_arm64.deb Checksums-Sha256: b29cb25e89e4fd8a9d453ac1cd426b71e54d1d3592febbea8b9b837a33fab0e1 6422704 seqan-needle-dbgsym_1.0.2+ds-2_arm64.deb fd3990d0c82b2347254e1b02b7d4541f6aafd57c7e271f1565efdd376125c687 115368 seqan-needle-doc_1.0.2+ds-2_all.deb 9def0e0e4c9d2bbe2249c10639a001008270aab7a40b67c6f9790031f5d79186 7020 seqan-needle_1.0.2+ds-2_arm64.buildinfo 666321500cfacd12e2fbb36107baa038920665c7fb0c63720777a272ca05791e 302652 seqan-needle_1.0.2+ds-2_arm64.deb Files: ab209884c516b79f53a1ba2a067057f6 6422704 debug optional seqan-needle-dbgsym_1.0.2+ds-2_arm64.deb c6e1f539210c0d15c6cff095d738cf25 115368 doc optional seqan-needle-doc_1.0.2+ds-2_all.deb 3f9a61876d4f854514872647f8fd9273 7020 science optional seqan-needle_1.0.2+ds-2_arm64.buildinfo 964ba077fc6d938334753afd5bfcfbf4 302652 science optional seqan-needle_1.0.2+ds-2_arm64.deb Mon May 13 14:31:07 UTC 2024 I: diffoscope 266 will be used to compare the two builds: Running as unit: rb-diffoscope-arm64_14-40858.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.x4ewUR1G/seqan-needle_1.0.2+ds-2.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.x4ewUR1G/seqan-needle_1.0.2+ds-2.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.x4ewUR1G/seqan-needle_1.0.2+ds-2.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.x4ewUR1G/b1/seqan-needle_1.0.2+ds-2_arm64.changes /srv/reproducible-results/rbuild-debian/r-b-build.x4ewUR1G/b2/seqan-needle_1.0.2+ds-2_arm64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.497s) 0.497s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.103s) 0.103s 12 calls diffoscope.comparators.binary.FilesystemFile ## specialize (total time: 0.000s) 0.000s 1 call specialize Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 904ms CPU time consumed: 897ms Mon May 13 14:31:08 UTC 2024 I: diffoscope 266 found no differences in the changes files, and a .buildinfo file also exists. Mon May 13 14:31:08 UTC 2024 I: seqan-needle from trixie built successfully and reproducibly on arm64. Mon May 13 14:31:09 UTC 2024 I: Submitting .buildinfo files to external archives: Mon May 13 14:31:09 UTC 2024 I: Submitting 8.0K b1/seqan-needle_1.0.2+ds-2_arm64.buildinfo.asc Mon May 13 14:31:10 UTC 2024 I: Submitting 8.0K b2/seqan-needle_1.0.2+ds-2_arm64.buildinfo.asc Mon May 13 14:31:11 UTC 2024 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Mon May 13 14:31:11 UTC 2024 I: Done submitting .buildinfo files. Mon May 13 14:31:11 UTC 2024 I: Removing signed seqan-needle_1.0.2+ds-2_arm64.buildinfo.asc files: removed './b1/seqan-needle_1.0.2+ds-2_arm64.buildinfo.asc' removed './b2/seqan-needle_1.0.2+ds-2_arm64.buildinfo.asc'