Sat Apr 27 11:28:43 UTC 2024 I: starting to build racon/trixie/arm64 on jenkins on '2024-04-27 11:28' Sat Apr 27 11:28:43 UTC 2024 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/arm64_22/8106/console.log Sat Apr 27 11:28:43 UTC 2024 I: Downloading source for trixie/racon=1.5.0-3 --2024-04-27 11:28:43-- http://deb.debian.org/debian/pool/main/r/racon/racon_1.5.0-3.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2106 (2.1K) [text/prs.lines.tag] Saving to: ‘racon_1.5.0-3.dsc’ 0K .. 100% 294M=0s 2024-04-27 11:28:43 (294 MB/s) - ‘racon_1.5.0-3.dsc’ saved [2106/2106] Sat Apr 27 11:28:43 UTC 2024 I: racon_1.5.0-3.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: racon Binary: racon Architecture: any Version: 1.5.0-3 Maintainer: Debian Med Packaging Team Uploaders: Cédric Lood , Andreas Tille Homepage: https://github.com/lbcb-sci/racon Standards-Version: 4.6.1 Vcs-Browser: https://salsa.debian.org/med-team/racon Vcs-Git: https://salsa.debian.org/med-team/racon.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13), cmake, libgtest-dev, libbioparser-dev, libcereal-dev, libedlib-dev (>= 1.2.7-3~), libspoa-dev, libthread-pool-dev (>= 3.0.2), rampler Package-List: racon deb science optional arch=any Checksums-Sha1: c508bea6f7b627e1796f2017669a8e99ed548ddd 3084154 racon_1.5.0.orig.tar.gz 5d5d6ba7f343bf6ee3124a052eb1858b9431dbf1 20652 racon_1.5.0-3.debian.tar.xz Checksums-Sha256: 58fdbbd88f0990b18e3139280aa4fa81e138a9cf0761edd66c43982af784d395 3084154 racon_1.5.0.orig.tar.gz 87ebd723dfb828888b59a5ed30143aa24ec3798c933f41e00196dacc3874d911 20652 racon_1.5.0-3.debian.tar.xz Files: de1982c33464fc7cec8a172931a6cf00 3084154 racon_1.5.0.orig.tar.gz face5096f46b2ce6c9c836bb01cf1603 20652 racon_1.5.0-3.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCgAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAmM1k2ERHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtHvaQ/+N79w1AElJT5zodwml2cN53AhsH46O5QP JzGAY+aYLx/AZ9C6VIbd6eiTsZ+qNDSWLqqd/ABykcNbZEA+dBiRpX08U4/5OCNi zhXwtP+rO9w0znNpX6S8jUHMnC9yFlwW4t/1GmNAZ42byGm1vA5/6IXTkg2icHL0 8SSvibSqiZgNhiitaMPnKs1fSQA2ymTONHczdKuSRjTzpVkADmdpQch3j0TwZmF5 /hcYo4651y2NbVVJRbTEwPNoDXUE3TaXo0UZVojz5sOYHDQBGcbrai64O7ycB7Pd w+y3JfPaHzfRm23vsnO6PbpG+GFOflG54PIlNHa0Z90QHGZSlZym2gjvU36M2fa9 t3ZMnBLcUBkvTPWJeis9H3mv1/gmFtomkxf0cMz928nSwO8P1MvhoyrCu66q7PzO sOI8KxZ4tdbz+JvwHaa/FBrwl+n1krpXMD8PwoGxsLrY0a/gErVXooD3YoeTzv6d U/xsrofS7jo8CIaWTT2aMoK5JN5YRbk12zH2hWnJw/7XOKBcnTbIhQjRpf4AwfjS X8IJf9txoPJEn1atb/Af7F4FqOmMoAwlDsJPrftzo9bPpfaUocqekHZZJsMro9Xi fbm+SfYqW1SkeLNSR2twNJG1r+eZm6dNsipnerAsTGM7ejcAoyu0LjtZnpoGgS/5 41EO1XUq4VQ= =933u -----END PGP SIGNATURE----- Sat Apr 27 11:28:43 UTC 2024 I: Checking whether the package is not for us Sat Apr 27 11:28:43 UTC 2024 I: Starting 1st build on remote node codethink04-arm64.debian.net. Sat Apr 27 11:28:43 UTC 2024 I: Preparing to do remote build '1' on codethink04-arm64.debian.net. Sat Apr 27 11:31:02 UTC 2024 I: Deleting $TMPDIR on codethink04-arm64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Fri Apr 26 23:28:46 -12 2024 I: pbuilder-time-stamp: 1714217326 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [racon_1.5.0-3.dsc] I: copying [./racon_1.5.0.orig.tar.gz] I: copying [./racon_1.5.0-3.debian.tar.xz] I: Extracting source gpgv: Signature made Thu Sep 29 12:45:21 2022 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./racon_1.5.0-3.dsc: no acceptable signature found dpkg-source: info: extracting racon in racon-1.5.0 dpkg-source: info: unpacking racon_1.5.0.orig.tar.gz dpkg-source: info: unpacking racon_1.5.0-3.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying use_debian_packaged_libs.patch dpkg-source: info: applying remove_buildpath dpkg-source: info: applying py3 I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/3236606/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='arm64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' DISTRIBUTION='trixie' HOME='/root' HOST_ARCH='arm64' IFS=' ' INVOCATION_ID='9a573c52cb5f4e45b93bde02dcade0fb' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='3236606' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.EM2y9HuU/pbuilderrc_QP5T --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.EM2y9HuU/b1 --logfile b1/build.log racon_1.5.0-3.dsc' SUDO_GID='109' SUDO_UID='104' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://192.168.101.4:3128' I: uname -a Linux codethink04-arm64 6.1.0-20-cloud-arm64 #1 SMP Debian 6.1.85-1 (2024-04-11) aarch64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Apr 23 11:23 /bin -> usr/bin I: user script /srv/workspace/pbuilder/3236606/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: arm64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), cmake, libgtest-dev, libbioparser-dev, libcereal-dev, libedlib-dev (>= 1.2.7-3~), libspoa-dev, libthread-pool-dev (>= 3.0.2), rampler dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19937 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on cmake; however: Package cmake is not installed. pbuilder-satisfydepends-dummy depends on libgtest-dev; however: Package libgtest-dev is not installed. pbuilder-satisfydepends-dummy depends on libbioparser-dev; however: Package libbioparser-dev is not installed. pbuilder-satisfydepends-dummy depends on libcereal-dev; however: Package libcereal-dev is not installed. pbuilder-satisfydepends-dummy depends on libedlib-dev (>= 1.2.7-3~); however: Package libedlib-dev is not installed. pbuilder-satisfydepends-dummy depends on libspoa-dev; however: Package libspoa-dev is not installed. pbuilder-satisfydepends-dummy depends on libthread-pool-dev (>= 3.0.2); however: Package libthread-pool-dev is not installed. pbuilder-satisfydepends-dummy depends on rampler; however: Package rampler is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} googletest{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libbioparser-dev{a} libbiosoup-dev{a} libcereal-dev{a} libdebhelper-perl{a} libedlib-dev{a} libedlib1{a} libelf1t64{a} libfile-stripnondeterminism-perl{a} libgtest-dev{a} libicu72{a} libmagic-mgc{a} libmagic1{a} libpipeline1{a} libspoa-dev{a} libspoa7.0.0{a} libsub-override-perl{a} libthread-pool-dev{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} po-debconf{a} rampler{a} rapidjson-dev{a} sensible-utils{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 43 newly installed, 0 to remove and 0 not upgraded. Need to get 20.8 MB of archives. After unpacking 84.7 MB will be used. The following packages have unmet dependencies: pbuilder-satisfydepends-dummy : Depends: cmake but it is not installable The following actions will resolve these dependencies: Remove the following packages: 1) libssl3 [3.1.5-1 (now)] Install the following packages: 2) cmake [3.28.3-1 (testing)] 3) cmake-data [3.28.3-1 (testing)] 4) libarchive13t64 [3.7.2-2 (testing)] 5) libbrotli1 [1.1.0-2+b3 (testing)] 6) libcurl4t64 [8.7.1-3 (testing)] 7) libexpat1 [2.6.2-1 (testing)] 8) libjsoncpp25 [1.9.5-6+b2 (testing)] 9) libldap-2.5-0 [2.5.13+dfsg-5+b3 (testing)] 10) libnghttp2-14 [1.59.0-1 (testing)] 11) libproc2-0 [2:4.0.4-4 (testing)] 12) libpsl5t64 [0.21.2-1.1 (testing)] 13) librhash0 [1.4.3-3+b1 (testing)] 14) librtmp1 [2.4+20151223.gitfa8646d.1-2+b4 (testing)] 15) libsasl2-2 [2.1.28+dfsg1-4+b1 (testing)] 16) libsasl2-modules-db [2.1.28+dfsg1-4+b1 (testing)] 17) libssh2-1t64 [1.11.0-4.1+b2 (testing)] 18) libssl3t64 [3.2.1-3 (testing)] 19) libuv1 [1.48.0-1 (testing)] 20) procps [2:4.0.4-4 (testing)] The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} cmake{a} cmake-data{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} googletest{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libarchive13t64{a} libbioparser-dev{a} libbiosoup-dev{a} libbrotli1{a} libcereal-dev{a} libcurl4t64{a} libdebhelper-perl{a} libedlib-dev{a} libedlib1{a} libelf1t64{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libgtest-dev{a} libicu72{a} libjsoncpp25{a} libldap-2.5-0{a} libmagic-mgc{a} libmagic1{a} libnghttp2-14{a} libpipeline1{a} libproc2-0{a} libpsl5t64{a} librhash0{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libspoa-dev{a} libspoa7.0.0{a} libssh2-1t64{a} libssl3t64{a} libsub-override-perl{a} libthread-pool-dev{a} libtool{a} libuchardet0{a} libuv1{a} libxml2{a} m4{a} man-db{a} po-debconf{a} procps{a} rampler{a} rapidjson-dev{a} sensible-utils{a} zlib1g-dev{a} The following packages will be REMOVED: libssl3{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl libarchive-cpio-perl libldap-common libltdl-dev libmail-sendmail-perl libsasl2-modules lynx psmisc publicsuffix wget 0 packages upgraded, 62 newly installed, 1 to remove and 0 not upgraded. Need to get 37.4 MB of archives. After unpacking 140 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main arm64 libssl3t64 arm64 3.2.1-3 [2537 kB] Get: 2 http://deb.debian.org/debian trixie/main arm64 libproc2-0 arm64 2:4.0.4-4 [61.7 kB] Get: 3 http://deb.debian.org/debian trixie/main arm64 procps arm64 2:4.0.4-4 [869 kB] Get: 4 http://deb.debian.org/debian trixie/main arm64 sensible-utils all 0.0.22 [22.4 kB] Get: 5 http://deb.debian.org/debian trixie/main arm64 libmagic-mgc arm64 1:5.45-2+b1 [314 kB] Get: 6 http://deb.debian.org/debian trixie/main arm64 libmagic1 arm64 1:5.45-2+b1 [100 kB] Get: 7 http://deb.debian.org/debian trixie/main arm64 file arm64 1:5.45-2+b1 [43.2 kB] Get: 8 http://deb.debian.org/debian trixie/main arm64 gettext-base arm64 0.21-14+b1 [160 kB] Get: 9 http://deb.debian.org/debian trixie/main arm64 libuchardet0 arm64 0.0.8-1+b1 [69.0 kB] Get: 10 http://deb.debian.org/debian trixie/main arm64 groff-base arm64 1.23.0-3+b1 [1126 kB] Get: 11 http://deb.debian.org/debian trixie/main arm64 bsdextrautils arm64 2.39.3-6 [90.0 kB] Get: 12 http://deb.debian.org/debian trixie/main arm64 libpipeline1 arm64 1.5.7-2 [36.5 kB] Get: 13 http://deb.debian.org/debian trixie/main arm64 man-db arm64 2.12.0-3 [1385 kB] Get: 14 http://deb.debian.org/debian trixie/main arm64 m4 arm64 1.4.19-4 [277 kB] Get: 15 http://deb.debian.org/debian trixie/main arm64 autoconf all 2.71-3 [332 kB] Get: 16 http://deb.debian.org/debian trixie/main arm64 autotools-dev all 20220109.1 [51.6 kB] Get: 17 http://deb.debian.org/debian trixie/main arm64 automake all 1:1.16.5-1.3 [823 kB] Get: 18 http://deb.debian.org/debian trixie/main arm64 autopoint all 0.21-14 [496 kB] Get: 19 http://deb.debian.org/debian trixie/main arm64 libicu72 arm64 72.1-4+b1 [9224 kB] Get: 20 http://deb.debian.org/debian trixie/main arm64 libxml2 arm64 2.9.14+dfsg-1.3+b2 [624 kB] Get: 21 http://deb.debian.org/debian trixie/main arm64 libarchive13t64 arm64 3.7.2-2 [321 kB] Get: 22 http://deb.debian.org/debian trixie/main arm64 libbrotli1 arm64 1.1.0-2+b3 [295 kB] Get: 23 http://deb.debian.org/debian trixie/main arm64 libsasl2-modules-db arm64 2.1.28+dfsg1-4+b1 [20.2 kB] Get: 24 http://deb.debian.org/debian trixie/main arm64 libsasl2-2 arm64 2.1.28+dfsg1-4+b1 [55.5 kB] Get: 25 http://deb.debian.org/debian trixie/main arm64 libldap-2.5-0 arm64 2.5.13+dfsg-5+b3 [172 kB] Get: 26 http://deb.debian.org/debian trixie/main arm64 libnghttp2-14 arm64 1.59.0-1 [70.2 kB] Get: 27 http://deb.debian.org/debian trixie/main arm64 libpsl5t64 arm64 0.21.2-1.1 [56.8 kB] Get: 28 http://deb.debian.org/debian trixie/main arm64 librtmp1 arm64 2.4+20151223.gitfa8646d.1-2+b4 [56.7 kB] Get: 29 http://deb.debian.org/debian trixie/main arm64 libssh2-1t64 arm64 1.11.0-4.1+b2 [207 kB] Get: 30 http://deb.debian.org/debian trixie/main arm64 libcurl4t64 arm64 8.7.1-3 [412 kB] Get: 31 http://deb.debian.org/debian trixie/main arm64 libexpat1 arm64 2.6.2-1 [88.7 kB] Get: 32 http://deb.debian.org/debian trixie/main arm64 libjsoncpp25 arm64 1.9.5-6+b2 [73.2 kB] Get: 33 http://deb.debian.org/debian trixie/main arm64 librhash0 arm64 1.4.3-3+b1 [127 kB] Get: 34 http://deb.debian.org/debian trixie/main arm64 libuv1 arm64 1.48.0-1 [142 kB] Get: 35 http://deb.debian.org/debian trixie/main arm64 cmake-data all 3.28.3-1 [2128 kB] Get: 36 http://deb.debian.org/debian trixie/main arm64 cmake arm64 3.28.3-1 [8892 kB] Get: 37 http://deb.debian.org/debian trixie/main arm64 libdebhelper-perl all 13.15.3 [88.0 kB] Get: 38 http://deb.debian.org/debian trixie/main arm64 libtool all 2.4.7-7 [517 kB] Get: 39 http://deb.debian.org/debian trixie/main arm64 dh-autoreconf all 20 [17.1 kB] Get: 40 http://deb.debian.org/debian trixie/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 41 http://deb.debian.org/debian trixie/main arm64 libsub-override-perl all 0.10-1 [10.6 kB] Get: 42 http://deb.debian.org/debian trixie/main arm64 libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get: 43 http://deb.debian.org/debian trixie/main arm64 dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get: 44 http://deb.debian.org/debian trixie/main arm64 libelf1t64 arm64 0.191-1+b1 [187 kB] Get: 45 http://deb.debian.org/debian trixie/main arm64 dwz arm64 0.15-1+b1 [102 kB] Get: 46 http://deb.debian.org/debian trixie/main arm64 gettext arm64 0.21-14+b1 [1249 kB] Get: 47 http://deb.debian.org/debian trixie/main arm64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 48 http://deb.debian.org/debian trixie/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 49 http://deb.debian.org/debian trixie/main arm64 debhelper all 13.15.3 [901 kB] Get: 50 http://deb.debian.org/debian trixie/main arm64 googletest all 1.14.0-1 [512 kB] Get: 51 http://deb.debian.org/debian trixie/main arm64 libbiosoup-dev all 0.11.0-2 [8000 B] Get: 52 http://deb.debian.org/debian trixie/main arm64 zlib1g-dev arm64 1:1.3.dfsg-3.1 [915 kB] Get: 53 http://deb.debian.org/debian trixie/main arm64 libbioparser-dev all 3.1.0-1 [9108 B] Get: 54 http://deb.debian.org/debian trixie/main arm64 rapidjson-dev all 1.1.0+dfsg2-7.2 [97.8 kB] Get: 55 http://deb.debian.org/debian trixie/main arm64 libcereal-dev arm64 1.3.2+dfsg-5 [221 kB] Get: 56 http://deb.debian.org/debian trixie/main arm64 libedlib1 arm64 1.2.7-5 [16.5 kB] Get: 57 http://deb.debian.org/debian trixie/main arm64 libedlib-dev arm64 1.2.7-5 [21.7 kB] Get: 58 http://deb.debian.org/debian trixie/main arm64 libgtest-dev arm64 1.14.0-1+b1 [241 kB] Get: 59 http://deb.debian.org/debian trixie/main arm64 libspoa7.0.0 arm64 4.1.4-1 [50.0 kB] Get: 60 http://deb.debian.org/debian trixie/main arm64 libspoa-dev arm64 4.1.4-1 [9380 B] Get: 61 http://deb.debian.org/debian trixie/main arm64 libthread-pool-dev arm64 4.0.0-2 [7304 B] Get: 62 http://deb.debian.org/debian trixie/main arm64 rampler arm64 2.1.1-1 [19.9 kB] Fetched 37.4 MB in 0s (130 MB/s) debconf: delaying package configuration, since apt-utils is not installed dpkg: libssl3:arm64: dependency problems, but removing anyway as you requested: libkrb5-3:arm64 depends on libssl3 (>= 3.0.0). coreutils depends on libssl3 (>= 3.0.0). (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19937 files and directories currently installed.) Removing libssl3:arm64 (3.1.5-1) ... Selecting previously unselected package libssl3t64:arm64. (Reading database ... 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Setting up libedlib1:arm64 (1.2.7-5) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.22) ... Setting up libbioparser-dev (3.1.0-1) ... Setting up librhash0:arm64 (1.4.3-3+b1) ... Setting up libuchardet0:arm64 (0.0.8-1+b1) ... Setting up procps (2:4.0.4-4) ... Setting up libsub-override-perl (0.10-1) ... Setting up cmake-data (3.28.3-1) ... Setting up libssh2-1t64:arm64 (1.11.0-4.1+b2) ... Setting up libxml2:arm64 (2.9.14+dfsg-1.3+b2) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.13.1-1) ... Setting up gettext (0.21-14+b1) ... Setting up libgtest-dev:arm64 (1.14.0-1+b1) ... Setting up libtool (2.4.7-7) ... Setting up libcereal-dev (1.3.2+dfsg-5) ... Setting up libldap-2.5-0:arm64 (2.5.13+dfsg-5+b3) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... 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Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/racon-1.5.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../racon_1.5.0-3_source.changes dpkg-buildpackage: info: source package racon dpkg-buildpackage: info: source version 1.5.0-3 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 debian/rules clean dh clean --buildsystem=cmake dh_auto_clean -O--buildsystem=cmake dh_autoreconf_clean -O--buildsystem=cmake dh_clean -O--buildsystem=cmake debian/rules binary dh binary --buildsystem=cmake dh_update_autotools_config -O--buildsystem=cmake dh_autoreconf -O--buildsystem=cmake debian/rules override_dh_auto_configure make[1]: Entering directory '/build/reproducible-path/racon-1.5.0' dh_auto_configure -- -Dracon_build_tests=ON -Dracon_build_wrapper=ON cd obj-aarch64-linux-gnu && DEB_PYTHON_INSTALL_LAYOUT=deb cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/aarch64-linux-gnu -Dracon_build_tests=ON -Dracon_build_wrapper=ON .. -- The CXX compiler identification is GNU 13.2.0 -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Configuring done 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-P CMakeFiles/racon.dir/cmake_clean_target.cmake /usr/bin/cmake -E cmake_link_script CMakeFiles/racon.dir/link.txt --verbose=1 /usr/bin/ar qc lib/libracon.a CMakeFiles/racon.dir/src/logger.cpp.o CMakeFiles/racon.dir/src/polisher.cpp.o CMakeFiles/racon.dir/src/overlap.cpp.o CMakeFiles/racon.dir/src/sequence.cpp.o CMakeFiles/racon.dir/src/window.cpp.o /usr/bin/ranlib lib/libracon.a make[3]: Leaving directory '/build/reproducible-path/racon-1.5.0/obj-aarch64-linux-gnu' [ 60%] Built target racon make -f CMakeFiles/racon_exe.dir/build.make CMakeFiles/racon_exe.dir/depend make[3]: Entering directory '/build/reproducible-path/racon-1.5.0/obj-aarch64-linux-gnu' cd /build/reproducible-path/racon-1.5.0/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/racon-1.5.0 /build/reproducible-path/racon-1.5.0 /build/reproducible-path/racon-1.5.0/obj-aarch64-linux-gnu /build/reproducible-path/racon-1.5.0/obj-aarch64-linux-gnu /build/reproducible-path/racon-1.5.0/obj-aarch64-linux-gnu/CMakeFiles/racon_exe.dir/DependInfo.cmake "--color=" make -f CMakeFiles/racon_test.dir/build.make CMakeFiles/racon_test.dir/depend make[3]: Entering directory '/build/reproducible-path/racon-1.5.0/obj-aarch64-linux-gnu' cd /build/reproducible-path/racon-1.5.0/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/racon-1.5.0 /build/reproducible-path/racon-1.5.0 /build/reproducible-path/racon-1.5.0/obj-aarch64-linux-gnu /build/reproducible-path/racon-1.5.0/obj-aarch64-linux-gnu /build/reproducible-path/racon-1.5.0/obj-aarch64-linux-gnu/CMakeFiles/racon_test.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/racon-1.5.0/obj-aarch64-linux-gnu' make -f CMakeFiles/racon_test.dir/build.make CMakeFiles/racon_test.dir/build make[3]: Entering directory '/build/reproducible-path/racon-1.5.0/obj-aarch64-linux-gnu' make[3]: Leaving directory 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-DVERSION=\"1.5.0\" -I/build/reproducible-path/racon-1.5.0/src -g -O2 -ffile-prefix-map=/build/reproducible-path/racon-1.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -pedantic -std=c++11 -MD -MT CMakeFiles/racon_exe.dir/src/main.cpp.o -MF CMakeFiles/racon_exe.dir/src/main.cpp.o.d -o CMakeFiles/racon_exe.dir/src/main.cpp.o -c /build/reproducible-path/racon-1.5.0/src/main.cpp [ 90%] Linking CXX executable bin/racon /usr/bin/cmake -E cmake_link_script CMakeFiles/racon_exe.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/racon-1.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -pedantic -Wl,-z,relro -Wl,-z,now CMakeFiles/racon_exe.dir/src/main.cpp.o -o bin/racon lib/libracon.a -ledlib -lspoa -lpthread -lz make[3]: Leaving directory '/build/reproducible-path/racon-1.5.0/obj-aarch64-linux-gnu' [ 90%] Built target racon_exe [100%] Linking CXX executable bin/racon_test /usr/bin/cmake -E cmake_link_script CMakeFiles/racon_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/racon-1.5.0=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -pedantic -Wl,-z,relro -Wl,-z,now CMakeFiles/racon_test.dir/test/racon_test.cpp.o -o bin/racon_test lib/libracon.a -ledlib -lspoa -pthread -lz /usr/lib/aarch64-linux-gnu/libgtest_main.a /usr/lib/aarch64-linux-gnu/libgtest.a make[3]: Leaving directory '/build/reproducible-path/racon-1.5.0/obj-aarch64-linux-gnu' [100%] Built target racon_test make[2]: Leaving directory '/build/reproducible-path/racon-1.5.0/obj-aarch64-linux-gnu' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/racon-1.5.0/obj-aarch64-linux-gnu/CMakeFiles 0 make[1]: Leaving directory '/build/reproducible-path/racon-1.5.0/obj-aarch64-linux-gnu' debian/rules override_dh_auto_test make[1]: Entering directory '/build/reproducible-path/racon-1.5.0' cd test && ../obj-*/bin/racon_test Running main() from ./googletest/src/gtest_main.cc [==========] Running 15 tests from 2 test suites. [----------] Global test environment set-up. [----------] 5 tests from RaconInitializeTest [ RUN ] RaconInitializeTest.PolisherTypeError [ OK ] RaconInitializeTest.PolisherTypeError (8 ms) [ RUN ] RaconInitializeTest.WindowLengthError [ OK ] RaconInitializeTest.WindowLengthError (7 ms) [ RUN ] RaconInitializeTest.SequencesPathExtensionError [ OK ] RaconInitializeTest.SequencesPathExtensionError (5 ms) [ RUN ] RaconInitializeTest.OverlapsPathExtensionError [ OK ] RaconInitializeTest.OverlapsPathExtensionError (10 ms) [ RUN ] RaconInitializeTest.TargetPathExtensionError [ OK ] RaconInitializeTest.TargetPathExtensionError (5 ms) [----------] 5 tests from RaconInitializeTest (40 ms total) [----------] 10 tests from RaconPolishingTest [ RUN ] RaconPolishingTest.ConsensusWithQualities [racon::Polisher::initialize] loaded target sequences 0.000629 s [racon::Polisher::initialize] loaded sequences 0.036538 s [racon::Polisher::initialize] loaded overlaps 0.000471 s [racon::Polisher::initialize] aligning overlaps [=> ] 0.088393 s [racon::Polisher::initialize] aligning overlaps [==> ] 0.132139 s [racon::Polisher::initialize] aligning overlaps [===> ] 0.148138 s [racon::Polisher::initialize] aligning overlaps [====> ] 0.164133 s [racon::Polisher::initialize] aligning overlaps [=====> ] 0.176138 s [racon::Polisher::initialize] aligning overlaps [======> ] 0.188135 s [racon::Polisher::initialize] aligning overlaps [=======> ] 0.196130 s [racon::Polisher::initialize] aligning overlaps [========> ] 0.220142 s [racon::Polisher::initialize] aligning overlaps [=========> ] 0.232128 s [racon::Polisher::initialize] aligning overlaps [==========> ] 0.248145 s [racon::Polisher::initialize] aligning overlaps [===========> ] 0.264239 s [racon::Polisher::initialize] aligning overlaps [============> ] 0.292229 s [racon::Polisher::initialize] aligning overlaps [=============> ] 0.310438 s [racon::Polisher::initialize] aligning overlaps [==============> ] 0.324204 s [racon::Polisher::initialize] aligning overlaps [===============> ] 0.352223 s [racon::Polisher::initialize] aligning overlaps [================> ] 0.388436 s [racon::Polisher::initialize] aligning overlaps [=================> ] 0.400405 s [racon::Polisher::initialize] aligning overlaps [==================> ] 0.416402 s [racon::Polisher::initialize] aligning overlaps [===================>] 0.428435 s [racon::Polisher::initialize] aligning overlaps [====================] 0.429570 s [racon::Polisher::initialize] transformed data into windows 0.001580 s [racon::Polisher::polish] generating consensus [=> ] 0.052772 s [racon::Polisher::polish] generating consensus [==> ] 0.104724 s [racon::Polisher::polish] generating consensus [===> ] 0.192735 s [racon::Polisher::polish] generating consensus [====> ] 0.220741 s [racon::Polisher::polish] generating consensus [=====> ] 0.248729 s [racon::Polisher::polish] generating consensus [======> ] 0.276730 s [racon::Polisher::polish] generating consensus [=======> ] 0.292733 s [racon::Polisher::polish] generating consensus [========> ] 0.312755 s [racon::Polisher::polish] generating consensus [=========> ] 0.328740 s [racon::Polisher::polish] generating consensus [==========> ] 0.344725 s [racon::Polisher::polish] generating consensus [===========> ] 0.376731 s [racon::Polisher::polish] generating consensus [============> ] 0.420745 s [racon::Polisher::polish] generating consensus [=============> ] 0.480725 s [racon::Polisher::polish] generating consensus [==============> ] 0.532912 s [racon::Polisher::polish] generating consensus [===============> ] 0.564891 s [racon::Polisher::polish] generating consensus [================> ] 0.596902 s [racon::Polisher::polish] generating consensus [=================> ] 0.624926 s [racon::Polisher::polish] generating consensus [==================> ] 0.636976 s [racon::Polisher::polish] generating consensus [===================>] 0.644926 s [racon::Polisher::polish] generating consensus [====================] 0.671745 s [racon::Polisher::] total = 1.151632 s [ OK ] RaconPolishingTest.ConsensusWithQualities (1161 ms) [ RUN ] RaconPolishingTest.ConsensusWithoutQualities [racon::Polisher::initialize] loaded target sequences 0.000555 s [racon::Polisher::initialize] loaded sequences 0.013969 s [racon::Polisher::initialize] loaded overlaps 0.000277 s [racon::Polisher::initialize] aligning overlaps [=> ] 0.040570 s [racon::Polisher::initialize] aligning overlaps [==> ] 0.052579 s [racon::Polisher::initialize] aligning overlaps [===> ] 0.072548 s [racon::Polisher::initialize] aligning overlaps [====> ] 0.088557 s [racon::Polisher::initialize] aligning overlaps [=====> ] 0.096551 s [racon::Polisher::initialize] aligning overlaps [======> ] 0.104556 s [racon::Polisher::initialize] aligning overlaps [=======> ] 0.128553 s [racon::Polisher::initialize] aligning overlaps [========> ] 0.160562 s [racon::Polisher::initialize] aligning overlaps [=========> ] 0.168565 s [racon::Polisher::initialize] aligning overlaps [==========> ] 0.184562 s [racon::Polisher::initialize] aligning overlaps [===========> ] 0.200560 s [racon::Polisher::initialize] aligning overlaps [============> ] 0.208548 s [racon::Polisher::initialize] aligning overlaps [=============> ] 0.236571 s [racon::Polisher::initialize] aligning overlaps [==============> ] 0.244558 s [racon::Polisher::initialize] aligning overlaps [===============> ] 0.252507 s [racon::Polisher::initialize] aligning overlaps [================> ] 0.252520 s [racon::Polisher::initialize] aligning overlaps [=================> ] 0.252524 s [racon::Polisher::initialize] aligning overlaps [==================> ] 0.253810 s [racon::Polisher::initialize] aligning overlaps [===================>] 0.253903 s [racon::Polisher::initialize] aligning overlaps [====================] 0.263259 s [racon::Polisher::initialize] transformed data into windows 0.000483 s [racon::Polisher::polish] generating consensus [=> ] 0.032493 s [racon::Polisher::polish] generating consensus [==> ] 0.068923 s [racon::Polisher::polish] generating consensus [===> ] 0.100469 s [racon::Polisher::polish] generating consensus [====> ] 0.128489 s [racon::Polisher::polish] generating consensus [=====> ] 0.156468 s [racon::Polisher::polish] generating consensus [======> ] 0.160649 s [racon::Polisher::polish] generating consensus [=======> ] 0.180426 s [racon::Polisher::polish] generating consensus [========> ] 0.196479 s [racon::Polisher::polish] generating consensus [=========> ] 0.220460 s [racon::Polisher::polish] generating consensus [==========> ] 0.256388 s [racon::Polisher::polish] generating consensus [===========> ] 0.292470 s [racon::Polisher::polish] generating consensus [============> ] 0.340475 s [racon::Polisher::polish] generating consensus [=============> ] 0.392498 s [racon::Polisher::polish] generating consensus [==============> ] 0.452467 s [racon::Polisher::polish] generating consensus [===============> ] 0.496480 s [racon::Polisher::polish] generating consensus [================> ] 0.548660 s [racon::Polisher::polish] generating consensus [=================> ] 0.592693 s [racon::Polisher::polish] generating consensus [==================> ] 0.624688 s [racon::Polisher::polish] generating consensus [===================>] 0.652474 s [racon::Polisher::polish] generating consensus [====================] 0.833198 s [racon::Polisher::] total = 1.121331 s [ OK ] RaconPolishingTest.ConsensusWithoutQualities (1133 ms) [ RUN ] RaconPolishingTest.ConsensusWithQualitiesAndAlignments [racon::Polisher::initialize] loaded target sequences 0.000443 s [racon::Polisher::initialize] loaded sequences 0.030217 s [racon::Polisher::initialize] loaded overlaps 0.015714 s [racon::Polisher::initialize] aligning overlaps [=> ] 0.012727 s [racon::Polisher::initialize] aligning overlaps [==> ] 0.012808 s [racon::Polisher::initialize] aligning overlaps [===> ] 0.012889 s [racon::Polisher::initialize] aligning overlaps [====> ] 0.012958 s [racon::Polisher::initialize] aligning overlaps [=====> ] 0.013026 s [racon::Polisher::initialize] aligning overlaps [======> ] 0.013095 s [racon::Polisher::initialize] aligning overlaps [=======> ] 0.013182 s [racon::Polisher::initialize] aligning overlaps [========> ] 0.013251 s [racon::Polisher::initialize] aligning overlaps [=========> ] 0.013322 s [racon::Polisher::initialize] aligning overlaps [==========> ] 0.013400 s [racon::Polisher::initialize] aligning overlaps [===========> ] 0.013467 s [racon::Polisher::initialize] aligning overlaps [============> ] 0.013534 s [racon::Polisher::initialize] aligning overlaps [=============> ] 0.013616 s [racon::Polisher::initialize] aligning overlaps [==============> ] 0.013702 s [racon::Polisher::initialize] aligning overlaps [===============> ] 0.013782 s [racon::Polisher::initialize] aligning overlaps [================> ] 0.013871 s [racon::Polisher::initialize] aligning overlaps [=================> ] 0.013955 s [racon::Polisher::initialize] aligning overlaps [==================> ] 0.014039 s [racon::Polisher::initialize] aligning overlaps [===================>] 0.014122 s [racon::Polisher::initialize] aligning overlaps [====================] 0.014203 s [racon::Polisher::initialize] transformed data into windows 0.002583 s [racon::Polisher::polish] generating consensus [=> ] 0.030641 s [racon::Polisher::polish] generating consensus [==> ] 0.058628 s [racon::Polisher::polish] generating consensus [===> ] 0.098612 s [racon::Polisher::polish] generating consensus [====> ] 0.114624 s [racon::Polisher::polish] generating consensus [=====> ] 0.130693 s [racon::Polisher::polish] generating consensus [======> ] 0.142604 s [racon::Polisher::polish] generating consensus [=======> ] 0.150805 s [racon::Polisher::polish] generating consensus [========> ] 0.170641 s [racon::Polisher::polish] generating consensus [=========> ] 0.186618 s [racon::Polisher::polish] generating consensus [==========> ] 0.202605 s [racon::Polisher::polish] generating consensus [===========> ] 0.230613 s [racon::Polisher::polish] generating consensus [============> ] 0.266537 s [racon::Polisher::polish] generating consensus [=============> ] 0.314613 s [racon::Polisher::polish] generating consensus [==============> ] 0.366613 s [racon::Polisher::polish] generating consensus [===============> ] 0.418618 s [racon::Polisher::polish] generating consensus [================> ] 0.450656 s [racon::Polisher::polish] generating consensus [=================> ] 0.494616 s [racon::Polisher::polish] generating consensus [==================> ] 0.514615 s [racon::Polisher::polish] generating consensus [===================>] 0.534619 s [racon::Polisher::polish] generating consensus [====================] 0.610307 s [racon::Polisher::] total = 0.683178 s [ OK ] RaconPolishingTest.ConsensusWithQualitiesAndAlignments (689 ms) [ RUN ] RaconPolishingTest.ConsensusWithoutQualitiesAndWithAlignments [racon::Polisher::initialize] loaded target sequences 0.000980 s [racon::Polisher::initialize] loaded sequences 0.013647 s [racon::Polisher::initialize] loaded overlaps 0.015820 s [racon::Polisher::initialize] aligning overlaps [=> ] 0.008122 s [racon::Polisher::initialize] aligning overlaps [==> ] 0.008444 s [racon::Polisher::initialize] aligning overlaps [===> ] 0.008765 s [racon::Polisher::initialize] aligning overlaps [====> ] 0.009076 s [racon::Polisher::initialize] aligning overlaps [=====> ] 0.009401 s [racon::Polisher::initialize] aligning overlaps [======> ] 0.009717 s [racon::Polisher::initialize] aligning overlaps [=======> ] 0.010026 s [racon::Polisher::initialize] aligning overlaps [========> ] 0.010331 s [racon::Polisher::initialize] aligning overlaps [=========> ] 0.010636 s [racon::Polisher::initialize] aligning overlaps [==========> ] 0.010945 s [racon::Polisher::initialize] aligning overlaps [===========> ] 0.011254 s [racon::Polisher::initialize] aligning overlaps [============> ] 0.011555 s [racon::Polisher::initialize] aligning overlaps [=============> ] 0.011870 s [racon::Polisher::initialize] aligning overlaps [==============> ] 0.012182 s [racon::Polisher::initialize] aligning overlaps [===============> ] 0.012461 s [racon::Polisher::initialize] aligning overlaps [================> ] 0.012712 s [racon::Polisher::initialize] aligning overlaps [=================> ] 0.012939 s [racon::Polisher::initialize] aligning overlaps [==================> ] 0.013173 s [racon::Polisher::initialize] aligning overlaps [===================>] 0.013401 s [racon::Polisher::initialize] aligning overlaps [====================] 0.013624 s [racon::Polisher::initialize] transformed data into windows 0.000471 s [racon::Polisher::polish] generating consensus [=> ] 0.063066 s [racon::Polisher::polish] generating consensus [==> ] 0.127081 s [racon::Polisher::polish] generating consensus [===> ] 0.183074 s [racon::Polisher::polish] generating consensus [====> ] 0.227089 s [racon::Polisher::polish] generating consensus [=====> ] 0.251089 s [racon::Polisher::polish] generating consensus [======> ] 0.268050 s [racon::Polisher::polish] generating consensus [=======> ] 0.282886 s [racon::Polisher::polish] generating consensus [========> ] 0.298896 s [racon::Polisher::polish] generating consensus [=========> ] 0.318879 s [racon::Polisher::polish] generating consensus [==========> ] 0.346884 s [racon::Polisher::polish] generating consensus [===========> ] 0.383063 s [racon::Polisher::polish] generating consensus [============> ] 0.422882 s [racon::Polisher::polish] generating consensus [=============> ] 0.479115 s [racon::Polisher::polish] generating consensus [==============> ] 0.535062 s [racon::Polisher::polish] generating consensus [===============> ] 0.583079 s [racon::Polisher::polish] generating consensus [================> ] 0.631104 s [racon::Polisher::polish] generating consensus [=================> ] 0.679060 s [racon::Polisher::polish] generating consensus [==================> ] 0.703077 s [racon::Polisher::polish] generating consensus [===================>] 0.726806 s [racon::Polisher::polish] generating consensus [====================] 0.818356 s [racon::Polisher::] total = 0.870661 s [ OK ] RaconPolishingTest.ConsensusWithoutQualitiesAndWithAlignments (872 ms) [ RUN ] RaconPolishingTest.ConsensusWithQualitiesLargerWindow [racon::Polisher::initialize] loaded target sequences 0.000550 s [racon::Polisher::initialize] loaded sequences 0.027550 s [racon::Polisher::initialize] loaded overlaps 0.000346 s [racon::Polisher::initialize] aligning overlaps [=> ] 0.026848 s [racon::Polisher::initialize] aligning overlaps [==> ] 0.039051 s [racon::Polisher::initialize] aligning overlaps [===> ] 0.043024 s [racon::Polisher::initialize] aligning overlaps [====> ] 0.055126 s [racon::Polisher::initialize] aligning overlaps [=====> ] 0.063028 s [racon::Polisher::initialize] aligning overlaps [======> ] 0.072091 s [racon::Polisher::initialize] aligning overlaps [=======> ] 0.095043 s [racon::Polisher::initialize] aligning overlaps [========> ] 0.103022 s [racon::Polisher::initialize] aligning overlaps [=========> ] 0.115024 s [racon::Polisher::initialize] aligning overlaps [==========> ] 0.119041 s [racon::Polisher::initialize] aligning overlaps [===========> ] 0.131045 s [racon::Polisher::initialize] aligning overlaps [============> ] 0.139032 s [racon::Polisher::initialize] aligning overlaps [=============> ] 0.151044 s [racon::Polisher::initialize] aligning overlaps [==============> ] 0.155018 s [racon::Polisher::initialize] aligning overlaps [===============> ] 0.163020 s [racon::Polisher::initialize] aligning overlaps [================> ] 0.175030 s [racon::Polisher::initialize] aligning overlaps [=================> ] 0.178858 s [racon::Polisher::initialize] aligning overlaps [==================> ] 0.186836 s [racon::Polisher::initialize] aligning overlaps [===================>] 0.198841 s [racon::Polisher::initialize] aligning overlaps [====================] 0.207344 s [racon::Polisher::initialize] transformed data into windows 0.001384 s [racon::Polisher::polish] generating consensus [=> ] 0.114209 s [racon::Polisher::polish] generating consensus [==> ] 0.114538 s [racon::Polisher::polish] generating consensus [===> ] 0.210195 s [racon::Polisher::polish] generating consensus [====> ] 0.217933 s [racon::Polisher::polish] generating consensus [=====> ] 0.266239 s [racon::Polisher::polish] generating consensus [======> ] 0.266696 s [racon::Polisher::polish] generating consensus [=======> ] 0.305931 s [racon::Polisher::polish] generating consensus [========> ] 0.305970 s [racon::Polisher::polish] generating consensus [=========> ] 0.373927 s [racon::Polisher::polish] generating consensus [==========> ] 0.373946 s [racon::Polisher::polish] generating consensus [===========> ] 0.497928 s [racon::Polisher::polish] generating consensus [============> ] 0.509927 s [racon::Polisher::polish] generating consensus [=============> ] 0.713927 s [racon::Polisher::polish] generating consensus [==============> ] 0.713947 s [racon::Polisher::polish] generating consensus [===============> ] 0.838210 s [racon::Polisher::polish] generating consensus [================> ] 0.838578 s [racon::Polisher::polish] generating consensus [=================> ] 0.941297 s [racon::Polisher::polish] generating consensus [==================> ] 0.941642 s [racon::Polisher::polish] generating consensus [===================>] 1.029933 s [racon::Polisher::polish] generating consensus [====================] 1.241922 s [racon::Polisher::] total = 1.487900 s [ OK ] RaconPolishingTest.ConsensusWithQualitiesLargerWindow (1504 ms) [ RUN ] RaconPolishingTest.ConsensusWithQualitiesEditDistance [racon::Polisher::initialize] loaded target sequences 0.000363 s [racon::Polisher::initialize] loaded sequences 0.035622 s [racon::Polisher::initialize] loaded overlaps 0.000226 s [racon::Polisher::initialize] aligning overlaps [=> ] 0.051928 s [racon::Polisher::initialize] aligning overlaps [==> ] 0.066537 s [racon::Polisher::initialize] aligning overlaps [===> ] 0.078633 s [racon::Polisher::initialize] aligning overlaps [====> ] 0.102547 s [racon::Polisher::initialize] aligning overlaps [=====> ] 0.118537 s [racon::Polisher::initialize] aligning overlaps [======> ] 0.118855 s [racon::Polisher::initialize] aligning overlaps [=======> ] 0.134543 s [racon::Polisher::initialize] aligning overlaps [========> ] 0.158491 s [racon::Polisher::initialize] aligning overlaps [=========> ] 0.162534 s [racon::Polisher::initialize] aligning overlaps [==========> ] 0.170626 s [racon::Polisher::initialize] aligning overlaps [===========> ] 0.186552 s [racon::Polisher::initialize] aligning overlaps [============> ] 0.198545 s [racon::Polisher::initialize] aligning overlaps [=============> ] 0.222563 s [racon::Polisher::initialize] aligning overlaps [==============> ] 0.222878 s [racon::Polisher::initialize] aligning overlaps [===============> ] 0.246537 s [racon::Polisher::initialize] aligning overlaps [================> ] 0.259993 s [racon::Polisher::initialize] aligning overlaps [=================> ] 0.286525 s [racon::Polisher::initialize] aligning overlaps [==================> ] 0.289333 s [racon::Polisher::initialize] aligning overlaps [===================>] 0.289669 s [racon::Polisher::initialize] aligning overlaps [====================] 0.302529 s [racon::Polisher::initialize] transformed data into windows 0.001606 s [racon::Polisher::polish] generating consensus [=> ] 0.042107 s [racon::Polisher::polish] generating consensus [==> ] 0.074098 s [racon::Polisher::polish] generating consensus [===> ] 0.101796 s [racon::Polisher::polish] generating consensus [====> ] 0.117840 s [racon::Polisher::polish] generating consensus [=====> ] 0.125828 s [racon::Polisher::polish] generating consensus [======> ] 0.133790 s [racon::Polisher::polish] generating consensus [=======> ] 0.153873 s [racon::Polisher::polish] generating consensus [========> ] 0.166068 s [racon::Polisher::polish] generating consensus [=========> ] 0.182051 s [racon::Polisher::polish] generating consensus [==========> ] 0.214058 s [racon::Polisher::polish] generating consensus [===========> ] 0.250052 s [racon::Polisher::polish] generating consensus [============> ] 0.298055 s [racon::Polisher::polish] generating consensus [=============> ] 0.366055 s [racon::Polisher::polish] generating consensus [==============> ] 0.421806 s [racon::Polisher::polish] generating consensus [===============> ] 0.461806 s [racon::Polisher::polish] generating consensus [================> ] 0.493815 s [racon::Polisher::polish] generating consensus [=================> ] 0.529802 s [racon::Polisher::polish] generating consensus [==================> ] 0.549795 s [racon::Polisher::polish] generating consensus [===================>] 0.569895 s [racon::Polisher::polish] generating consensus [====================] 0.642134 s [racon::Polisher::] total = 0.991822 s [ OK ] RaconPolishingTest.ConsensusWithQualitiesEditDistance (999 ms) [ RUN ] RaconPolishingTest.FragmentCorrectionWithQualities [racon::Polisher::initialize] loaded target sequences 0.026396 s [racon::Polisher::initialize] loaded sequences 0.030409 s [racon::Polisher::initialize] loaded overlaps 0.014133 s [racon::Polisher::initialize] aligning overlaps [=> ] 0.031704 s [racon::Polisher::initialize] aligning overlaps [==> ] 0.047967 s [racon::Polisher::initialize] aligning overlaps [===> ] 0.067964 s [racon::Polisher::initialize] aligning overlaps [====> ] 0.079941 s [racon::Polisher::initialize] aligning overlaps [=====> ] 0.095928 s [racon::Polisher::initialize] aligning overlaps [======> ] 0.111943 s [racon::Polisher::initialize] aligning overlaps [=======> ] 0.131948 s [racon::Polisher::initialize] aligning overlaps [========> ] 0.139979 s [racon::Polisher::initialize] aligning overlaps [=========> ] 0.151938 s [racon::Polisher::initialize] aligning overlaps [==========> ] 0.163933 s [racon::Polisher::initialize] aligning overlaps [===========> ] 0.175948 s [racon::Polisher::initialize] aligning overlaps [============> ] 0.191943 s [racon::Polisher::initialize] aligning overlaps [=============> ] 0.203924 s [racon::Polisher::initialize] aligning overlaps [==============> ] 0.223949 s [racon::Polisher::initialize] aligning overlaps [===============> ] 0.227909 s [racon::Polisher::initialize] aligning overlaps [================> ] 0.235969 s [racon::Polisher::initialize] aligning overlaps [=================> ] 0.241506 s [racon::Polisher::initialize] aligning overlaps [==================> ] 0.247683 s [racon::Polisher::initialize] aligning overlaps [===================>] 0.247693 s [racon::Polisher::initialize] aligning overlaps [====================] 0.256608 s [racon::Polisher::initialize] transformed data into windows 0.003021 s [racon::Polisher::polish] generating consensus [=> ] 0.035853 s [racon::Polisher::polish] generating consensus [==> ] 0.055840 s [racon::Polisher::polish] generating consensus [===> ] 0.079884 s [racon::Polisher::polish] generating consensus [====> ] 0.080089 s [racon::Polisher::polish] generating consensus [=====> ] 0.096052 s [racon::Polisher::polish] generating consensus [======> ] 0.104133 s [racon::Polisher::polish] generating consensus [=======> ] 0.119897 s [racon::Polisher::polish] generating consensus [========> ] 0.127821 s [racon::Polisher::polish] generating consensus [=========> ] 0.151911 s [racon::Polisher::polish] generating consensus [==========> ] 0.163912 s [racon::Polisher::polish] generating consensus [===========> ] 0.176209 s [racon::Polisher::polish] generating consensus [============> ] 0.180102 s [racon::Polisher::polish] generating consensus [=============> ] 0.196078 s [racon::Polisher::polish] generating consensus [==============> ] 0.196509 s [racon::Polisher::polish] generating consensus [===============> ] 0.220073 s [racon::Polisher::polish] generating consensus [================> ] 0.220503 s [racon::Polisher::polish] generating consensus [=================> ] 0.284030 s [racon::Polisher::polish] generating consensus [==================> ] 0.300062 s [racon::Polisher::polish] generating consensus [===================>] 0.318410 s [racon::Polisher::polish] generating consensus [====================] 0.319089 s [racon::Polisher::] total = 0.651054 s [ OK ] RaconPolishingTest.FragmentCorrectionWithQualities (652 ms) [ RUN ] RaconPolishingTest.FragmentCorrectionWithQualitiesFull [racon::Polisher::initialize] loaded target sequences 0.027093 s [racon::Polisher::initialize] loaded sequences 0.030463 s [racon::Polisher::initialize] loaded overlaps 0.007083 s [racon::Polisher::initialize] aligning overlaps [=> ] 0.317545 s [racon::Polisher::initialize] aligning overlaps [==> ] 0.497561 s [racon::Polisher::initialize] aligning overlaps [===> ] 0.653560 s [racon::Polisher::initialize] aligning overlaps [====> ] 0.869462 s [racon::Polisher::initialize] aligning overlaps [=====> ] 1.053467 s [racon::Polisher::initialize] aligning overlaps [======> ] 1.185457 s [racon::Polisher::initialize] aligning overlaps [=======> ] 1.361729 s [racon::Polisher::initialize] aligning overlaps [========> ] 1.589732 s [racon::Polisher::initialize] aligning overlaps [=========> ] 1.805723 s [racon::Polisher::initialize] aligning overlaps [==========> ] 2.013738 s [racon::Polisher::initialize] aligning overlaps [===========> ] 2.177737 s [racon::Polisher::initialize] aligning overlaps [============> ] 2.416056 s [racon::Polisher::initialize] aligning overlaps [=============> ] 2.677456 s [racon::Polisher::initialize] aligning overlaps [==============> ] 2.893464 s [racon::Polisher::initialize] aligning overlaps [===============> ] 3.161498 s [racon::Polisher::initialize] aligning overlaps [================> ] 3.413451 s [racon::Polisher::initialize] aligning overlaps [=================> ] 3.629462 s [racon::Polisher::initialize] aligning overlaps [==================> ] 3.889545 s [racon::Polisher::initialize] aligning overlaps [===================>] 4.157533 s [racon::Polisher::initialize] aligning overlaps [====================] 4.347241 s [racon::Polisher::initialize] transformed data into windows 0.046545 s [racon::Polisher::polish] generating consensus [=> ] 1.334063 s [racon::Polisher::polish] generating consensus [==> ] 2.242466 s [racon::Polisher::polish] generating consensus [===> ] 3.007603 s [racon::Polisher::polish] generating consensus [====> ] 3.830057 s [racon::Polisher::polish] generating consensus [=====> ] 4.813970 s [racon::Polisher::polish] generating consensus [======> ] 5.634147 s [racon::Polisher::polish] generating consensus [=======> ] 6.704504 s [racon::Polisher::polish] generating consensus [========> ] 7.322267 s [racon::Polisher::polish] generating consensus [=========> ] 8.042245 s [racon::Polisher::polish] generating consensus [==========> ] 9.082248 s [racon::Polisher::polish] generating consensus [===========> ] 9.878036 s [racon::Polisher::polish] generating consensus [============> ] 10.721975 s [racon::Polisher::polish] generating consensus [=============> ] 11.493979 s [racon::Polisher::polish] generating consensus [==============> ] 12.370251 s [racon::Polisher::polish] generating consensus [===============> ] 13.250259 s [racon::Polisher::polish] generating consensus [================> ] 13.830028 s [racon::Polisher::polish] generating consensus [=================> ] 14.765988 s [racon::Polisher::polish] generating consensus [==================> ] 15.638105 s [racon::Polisher::polish] generating consensus [===================>] 16.629973 s [racon::Polisher::polish] generating consensus [====================] 17.350121 s [racon::Polisher::] total = 21.812714 s [ OK ] RaconPolishingTest.FragmentCorrectionWithQualitiesFull (21823 ms) [ RUN ] RaconPolishingTest.FragmentCorrectionWithoutQualitiesFull [racon::Polisher::initialize] loaded target sequences 0.011459 s [racon::Polisher::initialize] loaded sequences 0.015683 s [racon::Polisher::initialize] loaded overlaps 0.015963 s [racon::Polisher::initialize] aligning overlaps [=> ] 0.295971 s [racon::Polisher::initialize] aligning overlaps [==> ] 0.475968 s [racon::Polisher::initialize] aligning overlaps [===> ] 0.655987 s [racon::Polisher::initialize] aligning overlaps [====> ] 0.871976 s [racon::Polisher::initialize] aligning overlaps [=====> ] 1.060179 s [racon::Polisher::initialize] aligning overlaps [======> ] 1.192193 s [racon::Polisher::initialize] aligning overlaps [=======> ] 1.368192 s [racon::Polisher::initialize] aligning overlaps [========> ] 1.596156 s [racon::Polisher::initialize] aligning overlaps [=========> ] 1.851987 s [racon::Polisher::initialize] aligning overlaps [==========> ] 2.075971 s [racon::Polisher::initialize] aligning overlaps [===========> ] 2.260183 s [racon::Polisher::initialize] aligning overlaps [============> ] 2.500164 s [racon::Polisher::initialize] aligning overlaps [=============> ] 2.772160 s [racon::Polisher::initialize] aligning overlaps [==============> ] 3.048180 s [racon::Polisher::initialize] aligning overlaps [===============> ] 3.328014 s [racon::Polisher::initialize] aligning overlaps [================> ] 3.731971 s [racon::Polisher::initialize] aligning overlaps [=================> ] 3.935987 s [racon::Polisher::initialize] aligning overlaps [==================> ] 4.199988 s [racon::Polisher::initialize] aligning overlaps [===================>] 4.487886 s [racon::Polisher::initialize] aligning overlaps [====================] 4.590851 s [racon::Polisher::initialize] transformed data into windows 0.015472 s [racon::Polisher::polish] generating consensus [=> ] 1.611268 s [racon::Polisher::polish] generating consensus [==> ] 2.907259 s [racon::Polisher::polish] generating consensus [===> ] 4.011302 s [racon::Polisher::polish] generating consensus [====> ] 4.927297 s [racon::Polisher::polish] generating consensus [=====> ] 6.011267 s [racon::Polisher::polish] generating consensus [======> ] 7.079547 s [racon::Polisher::polish] generating consensus [=======> ] 8.219415 s [racon::Polisher::polish] generating consensus [========> ] 9.031411 s [racon::Polisher::polish] generating consensus [=========> ] 10.163247 s [racon::Polisher::polish] generating consensus [==========> ] 11.431258 s [racon::Polisher::polish] generating consensus [===========> ] 12.484185 s [racon::Polisher::polish] generating consensus [============> ] 13.935381 s [racon::Polisher::polish] generating consensus [=============> ] 15.079264 s [racon::Polisher::polish] generating consensus [==============> ] 17.011328 s [racon::Polisher::polish] generating consensus [===============> ] 18.663534 s [racon::Polisher::polish] generating consensus [================> ] 19.407314 s [racon::Polisher::polish] generating consensus [=================> ] 21.375256 s [racon::Polisher::polish] generating consensus [==================> ] 22.867595 s [racon::Polisher::polish] generating consensus [===================>] 24.139282 s [racon::Polisher::polish] generating consensus [====================] 24.912189 s [racon::Polisher::] total = 29.564710 s [ OK ] RaconPolishingTest.FragmentCorrectionWithoutQualitiesFull (29568 ms) [ RUN ] RaconPolishingTest.FragmentCorrectionWithQualitiesFullMhap [racon::Polisher::initialize] loaded target sequences 0.039006 s [racon::Polisher::initialize] loaded sequences 0.048298 s [racon::Polisher::initialize] loaded overlaps 0.008558 s [racon::Polisher::initialize] aligning overlaps [=> ] 0.434003 s [racon::Polisher::initialize] aligning overlaps [==> ] 0.670125 s [racon::Polisher::initialize] aligning overlaps [===> ] 0.869999 s [racon::Polisher::initialize] aligning overlaps [====> ] 1.113854 s [racon::Polisher::initialize] aligning overlaps [=====> ] 1.262048 s [racon::Polisher::initialize] aligning overlaps [======> ] 1.406191 s [racon::Polisher::initialize] aligning overlaps [=======> ] 1.593951 s [racon::Polisher::initialize] aligning overlaps [========> ] 1.885949 s [racon::Polisher::initialize] aligning overlaps [=========> ] 2.296313 s [racon::Polisher::initialize] aligning overlaps [==========> ] 2.573937 s [racon::Polisher::initialize] aligning overlaps [===========> ] 2.761959 s [racon::Polisher::initialize] aligning overlaps [============> ] 3.033969 s [racon::Polisher::initialize] aligning overlaps [=============> ] 3.376253 s [racon::Polisher::initialize] aligning overlaps [==============> ] 3.666002 s [racon::Polisher::initialize] aligning overlaps [===============> ] 3.946037 s [racon::Polisher::initialize] aligning overlaps [================> ] 4.237847 s [racon::Polisher::initialize] aligning overlaps [=================> ] 4.525860 s [racon::Polisher::initialize] aligning overlaps [==================> ] 5.341864 s [racon::Polisher::initialize] aligning overlaps [===================>] 5.548842 s [racon::Polisher::initialize] aligning overlaps [====================] 5.709435 s [racon::Polisher::initialize] transformed data into windows 0.083697 s [racon::Polisher::polish] generating consensus [=> ] 2.764076 s [racon::Polisher::polish] generating consensus [==> ] 3.690431 s [racon::Polisher::polish] generating consensus [===> ] 4.699855 s [racon::Polisher::polish] generating consensus [====> ] 5.799845 s [racon::Polisher::polish] generating consensus [=====> ] 6.635900 s [racon::Polisher::polish] generating consensus [======> ] 7.727845 s [racon::Polisher::polish] generating consensus [=======> ] 9.012082 s [racon::Polisher::polish] generating consensus [========> ] 9.961585 s [racon::Polisher::polish] generating consensus [=========> ] 10.824089 s [racon::Polisher::polish] generating consensus [==========> ] 12.044276 s [racon::Polisher::polish] generating consensus [===========> ] 13.255859 s [racon::Polisher::polish] generating consensus [============> ] 14.356118 s [racon::Polisher::polish] generating consensus [=============> ] 15.296144 s [racon::Polisher::polish] generating consensus [==============> ] 16.386254 s [racon::Polisher::polish] generating consensus [===============> ] 17.799812 s [racon::Polisher::polish] generating consensus [================> ] 18.512119 s [racon::Polisher::polish] generating consensus [=================> ] 19.868126 s [racon::Polisher::polish] generating consensus [==================> ] 20.975974 s [racon::Polisher::polish] generating consensus [===================>] 21.847911 s [racon::Polisher::polish] generating consensus [====================] 22.143826 s [racon::Polisher::] total = 28.039190 s [ OK ] RaconPolishingTest.FragmentCorrectionWithQualitiesFullMhap (28042 ms) [----------] 10 tests from RaconPolishingTest (86452 ms total) [----------] Global test environment tear-down [==========] 15 tests from 2 test suites ran. (86492 ms total) [ PASSED ] 15 tests. make[1]: Leaving directory '/build/reproducible-path/racon-1.5.0' create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=cmake dh_prep -O--buildsystem=cmake dh_auto_install --destdir=debian/racon/ -O--buildsystem=cmake cd obj-aarch64-linux-gnu && make -j12 install DESTDIR=/build/reproducible-path/racon-1.5.0/debian/racon AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/reproducible-path/racon-1.5.0/obj-aarch64-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/racon-1.5.0 -B/build/reproducible-path/racon-1.5.0/obj-aarch64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall make[2]: Entering directory '/build/reproducible-path/racon-1.5.0/obj-aarch64-linux-gnu' make[2]: Nothing to be done for 'preinstall'. make[2]: Leaving directory '/build/reproducible-path/racon-1.5.0/obj-aarch64-linux-gnu' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "None" -- Installing: /build/reproducible-path/racon-1.5.0/debian/racon/usr/bin/racon make[1]: Leaving directory '/build/reproducible-path/racon-1.5.0/obj-aarch64-linux-gnu' dh_install -O--buildsystem=cmake dh_installdocs -O--buildsystem=cmake dh_installchangelogs -O--buildsystem=cmake dh_installexamples -O--buildsystem=cmake dh_installman -O--buildsystem=cmake dh_installsystemduser -O--buildsystem=cmake dh_lintian -O--buildsystem=cmake dh_perl -O--buildsystem=cmake dh_link -O--buildsystem=cmake dh_strip_nondeterminism -O--buildsystem=cmake dh_compress -O--buildsystem=cmake dh_fixperms -O--buildsystem=cmake dh_missing -O--buildsystem=cmake dh_dwz -a -O--buildsystem=cmake dh_strip -a -O--buildsystem=cmake dh_makeshlibs -a -O--buildsystem=cmake dh_shlibdeps -a -O--buildsystem=cmake dh_installdeb -O--buildsystem=cmake dh_gencontrol -O--buildsystem=cmake dh_md5sums -O--buildsystem=cmake dh_builddeb -O--buildsystem=cmake dpkg-deb: building package 'racon' in '../racon_1.5.0-3_arm64.deb'. dpkg-deb: building package 'racon-dbgsym' in '../racon-dbgsym_1.5.0-3_arm64.deb'. dpkg-genbuildinfo --build=binary -O../racon_1.5.0-3_arm64.buildinfo dpkg-genchanges --build=binary -O../racon_1.5.0-3_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/3236606 and its subdirectories I: Current time: Fri Apr 26 23:31:01 -12 2024 I: pbuilder-time-stamp: 1714217461 Sat Apr 27 11:31:03 UTC 2024 I: 1st build successful. Starting 2nd build on remote node codethink02-arm64.debian.net. Sat Apr 27 11:31:03 UTC 2024 I: Preparing to do remote build '2' on codethink02-arm64.debian.net. Sat Apr 27 11:35:00 UTC 2024 I: Deleting $TMPDIR on codethink02-arm64.debian.net. Sat Apr 27 11:35:00 UTC 2024 I: racon_1.5.0-3_arm64.changes: Format: 1.8 Date: Thu, 29 Sep 2022 14:39:55 +0200 Source: racon Binary: racon racon-dbgsym Architecture: arm64 Version: 1.5.0-3 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: racon - consensus module for raw de novo DNA assembly of long uncorrected Changes: racon (1.5.0-3) unstable; urgency=medium . * Standards-Version: 4.6.1 (routine-update) * Drop patch making racon compatible to old libthread_pool Checksums-Sha1: d81013cd519c5ad59d89b323ad5ebad0c287299d 980020 racon-dbgsym_1.5.0-3_arm64.deb 0b5d4157064624aaf2924c49c35ad8a794cdc6fe 6406 racon_1.5.0-3_arm64.buildinfo 6461d6a6586561e29e69ec51f04b8d4c1691a10d 3109796 racon_1.5.0-3_arm64.deb Checksums-Sha256: e45e62a8756e34c7e15a1538c76ed38e85edf0db2a4f5eb9ba26f126e9221e1b 980020 racon-dbgsym_1.5.0-3_arm64.deb 0c3904f05c79f5ebd3d8011d9b7f5d425b5d6768e41c26ed9e802a5a3682aceb 6406 racon_1.5.0-3_arm64.buildinfo d1579ba947e307bce2bc4e2a0c79871f24dc78eeffddad9e02b1581dbbc87052 3109796 racon_1.5.0-3_arm64.deb Files: 2b4043a564059ed93ea70336b1cfaa14 980020 debug optional racon-dbgsym_1.5.0-3_arm64.deb 0eb05f5bf697e3e0336e06977c7743e2 6406 science optional racon_1.5.0-3_arm64.buildinfo 79e70fc08584ad27adaca6dac6bad5c7 3109796 science optional racon_1.5.0-3_arm64.deb Sat Apr 27 11:35:02 UTC 2024 I: diffoscope 265 will be used to compare the two builds: Running as unit: rb-diffoscope-arm64_22-8106.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.EM2y9HuU/racon_1.5.0-3.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.EM2y9HuU/racon_1.5.0-3.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.EM2y9HuU/racon_1.5.0-3.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.EM2y9HuU/b1/racon_1.5.0-3_arm64.changes /srv/reproducible-results/rbuild-debian/r-b-build.EM2y9HuU/b2/racon_1.5.0-3_arm64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.406s) 0.406s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.058s) 0.058s 12 calls diffoscope.comparators.binary.FilesystemFile ## specialize (total time: 0.000s) 0.000s 1 call specialize Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 752ms CPU time consumed: 729ms Sat Apr 27 11:35:03 UTC 2024 I: diffoscope 265 found no differences in the changes files, and a .buildinfo file also exists. Sat Apr 27 11:35:03 UTC 2024 I: racon from trixie built successfully and reproducibly on arm64. Sat Apr 27 11:35:04 UTC 2024 I: Submitting .buildinfo files to external archives: Sat Apr 27 11:35:04 UTC 2024 I: Submitting 8.0K b1/racon_1.5.0-3_arm64.buildinfo.asc Sat Apr 27 11:35:06 UTC 2024 I: Submitting 8.0K b2/racon_1.5.0-3_arm64.buildinfo.asc Sat Apr 27 11:35:06 UTC 2024 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Sat Apr 27 11:35:06 UTC 2024 I: Done submitting .buildinfo files. Sat Apr 27 11:35:06 UTC 2024 I: Removing signed racon_1.5.0-3_arm64.buildinfo.asc files: removed './b1/racon_1.5.0-3_arm64.buildinfo.asc' removed './b2/racon_1.5.0-3_arm64.buildinfo.asc'