Wed Dec 4 00:51:44 UTC 2024 I: starting to build python-dendropy/trixie/arm64 on jenkins on '2024-12-04 00:51' Wed Dec 4 00:51:44 UTC 2024 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/arm64_4/47368/console.log Wed Dec 4 00:51:44 UTC 2024 I: Downloading source for trixie/python-dendropy=4.6.1-2 --2024-12-04 00:51:45-- http://deb.debian.org/debian/pool/main/p/python-dendropy/python-dendropy_4.6.1-2.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2141 (2.1K) [text/prs.lines.tag] Saving to: ‘python-dendropy_4.6.1-2.dsc’ 0K .. 100% 294M=0s 2024-12-04 00:51:45 (294 MB/s) - ‘python-dendropy_4.6.1-2.dsc’ saved [2141/2141] Wed Dec 4 00:51:45 UTC 2024 I: python-dendropy_4.6.1-2.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: python-dendropy Binary: python3-dendropy, sumtrees Architecture: all Version: 4.6.1-2 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille Homepage: https://jeetsukumaran.github.io/DendroPy Standards-Version: 4.7.0 Vcs-Browser: https://salsa.debian.org/med-team/python-dendropy Vcs-Git: https://salsa.debian.org/med-team/python-dendropy.git Testsuite: autopkgtest, autopkgtest-pkg-python Build-Depends: debhelper-compat (= 13), dh-python, python3-all, python3-setuptools Package-List: python3-dendropy deb python optional arch=all sumtrees deb python optional arch=all Checksums-Sha1: bf6cf64afb9aa3a38f262505849db4dc5d40e3b5 7716628 python-dendropy_4.6.1.orig.tar.xz 8860bebda8d0a96d2ea20ccca1489d7d45da46c2 10980 python-dendropy_4.6.1-2.debian.tar.xz Checksums-Sha256: 095c860fd92097b05fac590a12fc032b3107513d57a46edf1e8f436742eafe0a 7716628 python-dendropy_4.6.1.orig.tar.xz 3bcc768915133b0937b93a031a4eebf472af25dd32a2453cd02d63fc62340422 10980 python-dendropy_4.6.1-2.debian.tar.xz Files: 764a41d5c22a7282b95ad737ee8a12c0 7716628 python-dendropy_4.6.1.orig.tar.xz cb58cef9b1987a467afdde4a37a7965a 10980 python-dendropy_4.6.1-2.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQIzBAEBCgAdFiEEUtW9Dn1NsITjS1hl1KQc+t2yDbUFAmdMX+oACgkQ1KQc+t2y DbX0fA/+Lzs880QXHtqIBmkoHElM1bD7Crxfg9T4wVymMj47u81SPEq2XUP9P8t8 K9yyeyu1kVYc97Jx9c8LugFtFK0hDP74iHhSAZEZeUbtdhDMFo9gzJZPkFDEwWCc 8rAYEWGjyKgffTEN3sBI4oiwQaPdCm7iRnwxkNYEJdsb8oCymjiFtfczsOxSfJYF KAWHOQwV7fSdveTGxHRvzeTB9rGs4CLyvzM6hTJQXZ7bHy/nIwDu9/tF+CQ707fW Qb5F72mYYAzkQ+3DUqgCYkPSRMkbZ5bwH1ypdOSbS/cfWtiWIwJbA7bLqbqXgx1B 24raYgbUYCQurTh7Lw5BbuacBBGYfJVr13EOF7YBpQjUKx2evNeuShoiVOCg1ufJ jLZd7JjsfsaUPFtiQTG8AXdPjcPG1jEtzN/ezSOxoPvljuRWzJ2HabaVrfMQ/hnk NK100DFgCruJI2Dg/6Zj6iRnw8W3j+MWOFeCW/MGEHmKr6l5RBJ7xP1/9Fa0y8P4 Ma6zg9qgpx7rCsqFDNPHpDVRY1Lbip2hgC9ay9gHJQWzIOxqVoD++xjhpXtBBCbG s29X5ZHZ0hZMTjqln7bKQ68Kkdgcbd/iFS2SizRFjuJ5bKwKPA8H0icL/wgVCMzy aXjY8OIvTYhxhpyaNepuCIrwqzFCcnHl9SH+WhyYQDqsWj3oyNg= =uPjD -----END PGP SIGNATURE----- Wed Dec 4 00:51:45 UTC 2024 I: Checking whether the package is not for us Wed Dec 4 00:51:45 UTC 2024 I: Starting 1st build on remote node codethink02-arm64.debian.net. Wed Dec 4 00:51:45 UTC 2024 I: Preparing to do remote build '1' on codethink02-arm64.debian.net. Wed Dec 4 00:52:26 UTC 2024 I: Deleting $TMPDIR on codethink02-arm64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Tue Dec 3 12:51:47 -12 2024 I: pbuilder-time-stamp: 1733273507 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [python-dendropy_4.6.1-2.dsc] I: copying [./python-dendropy_4.6.1.orig.tar.xz] I: copying [./python-dendropy_4.6.1-2.debian.tar.xz] I: Extracting source gpgv: Signature made Sun Dec 1 13:08:58 2024 gpgv: using RSA key 52D5BD0E7D4DB084E34B5865D4A41CFADDB20DB5 gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./python-dendropy_4.6.1-2.dsc: no acceptable signature found dpkg-source: info: extracting python-dendropy in python-dendropy-4.6.1 dpkg-source: info: unpacking python-dendropy_4.6.1.orig.tar.xz dpkg-source: info: unpacking python-dendropy_4.6.1-2.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying do_not_try_running_non-existing_testsuite.patch dpkg-source: info: applying remove-pkg-resources-usage.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/452724/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='arm64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' DISTRIBUTION='trixie' HOME='/root' HOST_ARCH='arm64' IFS=' ' INVOCATION_ID='51395ab93dcb407dae86b3d244f0b413' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='452724' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.Ubj90E6t/pbuilderrc_4PgV --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.Ubj90E6t/b1 --logfile b1/build.log python-dendropy_4.6.1-2.dsc' SUDO_GID='109' SUDO_UID='104' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://192.168.101.4:3128' I: uname -a Linux codethink02-arm64 6.1.0-28-cloud-arm64 #1 SMP Debian 6.1.119-1 (2024-11-22) aarch64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Nov 22 14:40 /bin -> usr/bin I: user script /srv/workspace/pbuilder/452724/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: arm64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-python, python3-all, python3-setuptools dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 20080 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-python; however: Package dh-python is not installed. pbuilder-satisfydepends-dummy depends on python3-all; however: Package python3-all is not installed. pbuilder-satisfydepends-dummy depends on python3-setuptools; however: Package python3-setuptools is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libcom-err2{a} libdebhelper-perl{a} libelf1t64{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libgssapi-krb5-2{a} libicu72{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} libmagic-mgc{a} libmagic1t64{a} libnsl2{a} libpipeline1{a} libpython3-stdlib{a} libpython3.12-minimal{a} libpython3.12-stdlib{a} libreadline8t64{a} libtirpc-common{a} libtirpc3t64{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} media-types{a} netbase{a} po-debconf{a} python3{a} python3-all{a} python3-autocommand{a} python3-inflect{a} python3-jaraco.context{a} python3-jaraco.functools{a} python3-minimal{a} python3-more-itertools{a} python3-pkg-resources{a} python3-setuptools{a} python3-typeguard{a} python3-typing-extensions{a} python3-zipp{a} python3.12{a} python3.12-minimal{a} readline-common{a} sensible-utils{a} tzdata{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl krb5-locales libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 63 newly installed, 0 to remove and 0 not upgraded. Need to get 27.4 MB of archives. After unpacking 115 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main arm64 libpython3.12-minimal arm64 3.12.7-3 [808 kB] Get: 2 http://deb.debian.org/debian trixie/main arm64 libexpat1 arm64 2.6.4-1 [90.7 kB] Get: 3 http://deb.debian.org/debian trixie/main arm64 python3.12-minimal arm64 3.12.7-3 [1940 kB] Get: 4 http://deb.debian.org/debian trixie/main arm64 python3-minimal arm64 3.12.6-1 [26.7 kB] Get: 5 http://deb.debian.org/debian trixie/main arm64 media-types all 10.1.0 [26.9 kB] Get: 6 http://deb.debian.org/debian trixie/main arm64 netbase all 6.4 [12.8 kB] Get: 7 http://deb.debian.org/debian trixie/main arm64 tzdata all 2024b-3 [255 kB] Get: 8 http://deb.debian.org/debian trixie/main arm64 libkrb5support0 arm64 1.21.3-3 [32.1 kB] Get: 9 http://deb.debian.org/debian trixie/main arm64 libcom-err2 arm64 1.47.1-1+b1 [23.1 kB] Get: 10 http://deb.debian.org/debian trixie/main arm64 libk5crypto3 arm64 1.21.3-3 [80.8 kB] Get: 11 http://deb.debian.org/debian trixie/main arm64 libkeyutils1 arm64 1.6.3-4 [9352 B] Get: 12 http://deb.debian.org/debian trixie/main arm64 libkrb5-3 arm64 1.21.3-3 [310 kB] Get: 13 http://deb.debian.org/debian trixie/main arm64 libgssapi-krb5-2 arm64 1.21.3-3 [126 kB] Get: 14 http://deb.debian.org/debian trixie/main arm64 libtirpc-common all 1.3.4+ds-1.3 [10.9 kB] Get: 15 http://deb.debian.org/debian trixie/main arm64 libtirpc3t64 arm64 1.3.4+ds-1.3+b1 [78.7 kB] Get: 16 http://deb.debian.org/debian trixie/main arm64 libnsl2 arm64 1.3.0-3+b3 [37.9 kB] Get: 17 http://deb.debian.org/debian trixie/main arm64 readline-common all 8.2-5 [69.3 kB] Get: 18 http://deb.debian.org/debian trixie/main arm64 libreadline8t64 arm64 8.2-5 [159 kB] Get: 19 http://deb.debian.org/debian trixie/main arm64 libpython3.12-stdlib arm64 3.12.7-3 [1902 kB] Get: 20 http://deb.debian.org/debian trixie/main arm64 python3.12 arm64 3.12.7-3 [671 kB] Get: 21 http://deb.debian.org/debian trixie/main arm64 libpython3-stdlib arm64 3.12.6-1 [9692 B] Get: 22 http://deb.debian.org/debian trixie/main arm64 python3 arm64 3.12.6-1 [27.8 kB] Get: 23 http://deb.debian.org/debian trixie/main arm64 sensible-utils all 0.0.24 [24.8 kB] Get: 24 http://deb.debian.org/debian trixie/main arm64 libmagic-mgc arm64 1:5.45-3+b1 [314 kB] Get: 25 http://deb.debian.org/debian trixie/main arm64 libmagic1t64 arm64 1:5.45-3+b1 [102 kB] Get: 26 http://deb.debian.org/debian trixie/main arm64 file arm64 1:5.45-3+b1 [43.4 kB] Get: 27 http://deb.debian.org/debian trixie/main arm64 gettext-base arm64 0.22.5-2 [198 kB] Get: 28 http://deb.debian.org/debian trixie/main arm64 libuchardet0 arm64 0.0.8-1+b2 [69.2 kB] Get: 29 http://deb.debian.org/debian trixie/main arm64 groff-base arm64 1.23.0-5 [1129 kB] Get: 30 http://deb.debian.org/debian trixie/main arm64 bsdextrautils arm64 2.40.2-11 [91.2 kB] Get: 31 http://deb.debian.org/debian trixie/main arm64 libpipeline1 arm64 1.5.8-1 [40.2 kB] Get: 32 http://deb.debian.org/debian trixie/main arm64 man-db arm64 2.13.0-1 [1404 kB] Get: 33 http://deb.debian.org/debian trixie/main arm64 m4 arm64 1.4.19-4 [277 kB] Get: 34 http://deb.debian.org/debian trixie/main arm64 autoconf all 2.72-3 [493 kB] Get: 35 http://deb.debian.org/debian trixie/main arm64 autotools-dev all 20220109.1 [51.6 kB] Get: 36 http://deb.debian.org/debian trixie/main arm64 automake all 1:1.16.5-1.3 [823 kB] Get: 37 http://deb.debian.org/debian trixie/main arm64 autopoint all 0.22.5-2 [723 kB] Get: 38 http://deb.debian.org/debian trixie/main arm64 libdebhelper-perl all 13.20 [89.7 kB] Get: 39 http://deb.debian.org/debian trixie/main arm64 libtool all 2.4.7-8 [517 kB] Get: 40 http://deb.debian.org/debian trixie/main arm64 dh-autoreconf all 20 [17.1 kB] Get: 41 http://deb.debian.org/debian trixie/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 42 http://deb.debian.org/debian trixie/main arm64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 43 http://deb.debian.org/debian trixie/main arm64 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 44 http://deb.debian.org/debian trixie/main arm64 libelf1t64 arm64 0.192-4 [189 kB] Get: 45 http://deb.debian.org/debian trixie/main arm64 dwz arm64 0.15-1+b1 [102 kB] Get: 46 http://deb.debian.org/debian trixie/main arm64 libicu72 arm64 72.1-5+b1 [9239 kB] Get: 47 http://deb.debian.org/debian trixie/main arm64 libxml2 arm64 2.12.7+dfsg+really2.9.14-0.2+b1 [630 kB] Get: 48 http://deb.debian.org/debian trixie/main arm64 gettext arm64 0.22.5-2 [1532 kB] Get: 49 http://deb.debian.org/debian trixie/main arm64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 50 http://deb.debian.org/debian trixie/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 51 http://deb.debian.org/debian trixie/main arm64 debhelper all 13.20 [915 kB] Get: 52 http://deb.debian.org/debian trixie/main arm64 python3-autocommand all 2.2.2-3 [13.6 kB] Get: 53 http://deb.debian.org/debian trixie/main arm64 python3-more-itertools all 10.5.0-1 [63.8 kB] Get: 54 http://deb.debian.org/debian trixie/main arm64 python3-typing-extensions all 4.12.2-2 [73.0 kB] Get: 55 http://deb.debian.org/debian trixie/main arm64 python3-typeguard all 4.4.1-1 [37.0 kB] Get: 56 http://deb.debian.org/debian trixie/main arm64 python3-inflect all 7.3.1-2 [32.4 kB] Get: 57 http://deb.debian.org/debian trixie/main arm64 python3-jaraco.context all 6.0.0-1 [7984 B] Get: 58 http://deb.debian.org/debian trixie/main arm64 python3-jaraco.functools all 4.1.0-1 [12.0 kB] Get: 59 http://deb.debian.org/debian trixie/main arm64 python3-pkg-resources all 74.1.2-2 [213 kB] Get: 60 http://deb.debian.org/debian trixie/main arm64 python3-zipp all 3.21.0-1 [10.6 kB] Get: 61 http://deb.debian.org/debian trixie/main arm64 python3-setuptools all 74.1.2-2 [736 kB] Get: 62 http://deb.debian.org/debian trixie/main arm64 dh-python all 6.20241024 [109 kB] Get: 63 http://deb.debian.org/debian trixie/main arm64 python3-all arm64 3.12.6-1 [1040 B] Fetched 27.4 MB in 0s (154 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libpython3.12-minimal:arm64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20080 files and directories currently installed.) Preparing to unpack .../libpython3.12-minimal_3.12.7-3_arm64.deb ... Unpacking libpython3.12-minimal:arm64 (3.12.7-3) ... Selecting previously unselected package libexpat1:arm64. Preparing to unpack .../libexpat1_2.6.4-1_arm64.deb ... Unpacking libexpat1:arm64 (2.6.4-1) ... Selecting previously unselected package python3.12-minimal. Preparing to unpack .../python3.12-minimal_3.12.7-3_arm64.deb ... Unpacking python3.12-minimal (3.12.7-3) ... Setting up libpython3.12-minimal:arm64 (3.12.7-3) ... Setting up libexpat1:arm64 (2.6.4-1) ... Setting up python3.12-minimal (3.12.7-3) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20400 files and directories currently installed.) Preparing to unpack .../00-python3-minimal_3.12.6-1_arm64.deb ... Unpacking python3-minimal (3.12.6-1) ... Selecting previously unselected package media-types. Preparing to unpack .../01-media-types_10.1.0_all.deb ... Unpacking media-types (10.1.0) ... Selecting previously unselected package netbase. Preparing to unpack .../02-netbase_6.4_all.deb ... Unpacking netbase (6.4) ... Selecting previously unselected package tzdata. Preparing to unpack .../03-tzdata_2024b-3_all.deb ... Unpacking tzdata (2024b-3) ... Selecting previously unselected package libkrb5support0:arm64. Preparing to unpack .../04-libkrb5support0_1.21.3-3_arm64.deb ... Unpacking libkrb5support0:arm64 (1.21.3-3) ... Selecting previously unselected package libcom-err2:arm64. Preparing to unpack .../05-libcom-err2_1.47.1-1+b1_arm64.deb ... Unpacking libcom-err2:arm64 (1.47.1-1+b1) ... Selecting previously unselected package libk5crypto3:arm64. Preparing to unpack .../06-libk5crypto3_1.21.3-3_arm64.deb ... Unpacking libk5crypto3:arm64 (1.21.3-3) ... Selecting previously unselected package libkeyutils1:arm64. Preparing to unpack .../07-libkeyutils1_1.6.3-4_arm64.deb ... Unpacking libkeyutils1:arm64 (1.6.3-4) ... Selecting previously unselected package libkrb5-3:arm64. Preparing to unpack .../08-libkrb5-3_1.21.3-3_arm64.deb ... Unpacking libkrb5-3:arm64 (1.21.3-3) ... Selecting previously unselected package libgssapi-krb5-2:arm64. Preparing to unpack .../09-libgssapi-krb5-2_1.21.3-3_arm64.deb ... Unpacking libgssapi-krb5-2:arm64 (1.21.3-3) ... Selecting previously unselected package libtirpc-common. Preparing to unpack .../10-libtirpc-common_1.3.4+ds-1.3_all.deb ... Unpacking libtirpc-common (1.3.4+ds-1.3) ... Selecting previously unselected package libtirpc3t64:arm64. Preparing to unpack .../11-libtirpc3t64_1.3.4+ds-1.3+b1_arm64.deb ... Adding 'diversion of /lib/aarch64-linux-gnu/libtirpc.so.3 to /lib/aarch64-linux-gnu/libtirpc.so.3.usr-is-merged by libtirpc3t64' Adding 'diversion of /lib/aarch64-linux-gnu/libtirpc.so.3.0.0 to /lib/aarch64-linux-gnu/libtirpc.so.3.0.0.usr-is-merged by libtirpc3t64' Unpacking libtirpc3t64:arm64 (1.3.4+ds-1.3+b1) ... Selecting previously unselected package libnsl2:arm64. Preparing to unpack .../12-libnsl2_1.3.0-3+b3_arm64.deb ... Unpacking libnsl2:arm64 (1.3.0-3+b3) ... Selecting previously unselected package readline-common. Preparing to unpack .../13-readline-common_8.2-5_all.deb ... Unpacking readline-common (8.2-5) ... Selecting previously unselected package libreadline8t64:arm64. Preparing to unpack .../14-libreadline8t64_8.2-5_arm64.deb ... Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8 to /lib/aarch64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8.2 to /lib/aarch64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8 to /lib/aarch64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8.2 to /lib/aarch64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:arm64 (8.2-5) ... Selecting previously unselected package libpython3.12-stdlib:arm64. Preparing to unpack .../15-libpython3.12-stdlib_3.12.7-3_arm64.deb ... Unpacking libpython3.12-stdlib:arm64 (3.12.7-3) ... Selecting previously unselected package python3.12. Preparing to unpack .../16-python3.12_3.12.7-3_arm64.deb ... Unpacking python3.12 (3.12.7-3) ... Selecting previously unselected package libpython3-stdlib:arm64. Preparing to unpack .../17-libpython3-stdlib_3.12.6-1_arm64.deb ... Unpacking libpython3-stdlib:arm64 (3.12.6-1) ... Setting up python3-minimal (3.12.6-1) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 21462 files and directories currently installed.) Preparing to unpack .../00-python3_3.12.6-1_arm64.deb ... Unpacking python3 (3.12.6-1) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../01-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../02-libmagic-mgc_1%3a5.45-3+b1_arm64.deb ... Unpacking libmagic-mgc (1:5.45-3+b1) ... Selecting previously unselected package libmagic1t64:arm64. Preparing to unpack .../03-libmagic1t64_1%3a5.45-3+b1_arm64.deb ... Unpacking libmagic1t64:arm64 (1:5.45-3+b1) ... Selecting previously unselected package file. Preparing to unpack .../04-file_1%3a5.45-3+b1_arm64.deb ... Unpacking file (1:5.45-3+b1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../05-gettext-base_0.22.5-2_arm64.deb ... Unpacking gettext-base (0.22.5-2) ... Selecting previously unselected package libuchardet0:arm64. Preparing to unpack .../06-libuchardet0_0.0.8-1+b2_arm64.deb ... Unpacking libuchardet0:arm64 (0.0.8-1+b2) ... Selecting previously unselected package groff-base. Preparing to unpack .../07-groff-base_1.23.0-5_arm64.deb ... Unpacking groff-base (1.23.0-5) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../08-bsdextrautils_2.40.2-11_arm64.deb ... Unpacking bsdextrautils (2.40.2-11) ... Selecting previously unselected package libpipeline1:arm64. Preparing to unpack .../09-libpipeline1_1.5.8-1_arm64.deb ... Unpacking libpipeline1:arm64 (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../10-man-db_2.13.0-1_arm64.deb ... Unpacking man-db (2.13.0-1) ... Selecting previously unselected package m4. Preparing to unpack .../11-m4_1.4.19-4_arm64.deb ... Unpacking m4 (1.4.19-4) ... Selecting previously unselected package autoconf. Preparing to unpack .../12-autoconf_2.72-3_all.deb ... Unpacking autoconf (2.72-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../13-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../14-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../15-autopoint_0.22.5-2_all.deb ... Unpacking autopoint (0.22.5-2) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../16-libdebhelper-perl_13.20_all.deb ... Unpacking libdebhelper-perl (13.20) ... Selecting previously unselected package libtool. Preparing to unpack .../17-libtool_2.4.7-8_all.deb ... Unpacking libtool (2.4.7-8) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../18-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../19-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../20-libfile-stripnondeterminism-perl_1.14.0-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.14.0-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../21-dh-strip-nondeterminism_1.14.0-1_all.deb ... Unpacking dh-strip-nondeterminism (1.14.0-1) ... Selecting previously unselected package libelf1t64:arm64. Preparing to unpack .../22-libelf1t64_0.192-4_arm64.deb ... Unpacking libelf1t64:arm64 (0.192-4) ... Selecting previously unselected package dwz. Preparing to unpack .../23-dwz_0.15-1+b1_arm64.deb ... Unpacking dwz (0.15-1+b1) ... Selecting previously unselected package libicu72:arm64. Preparing to unpack .../24-libicu72_72.1-5+b1_arm64.deb ... Unpacking libicu72:arm64 (72.1-5+b1) ... Selecting previously unselected package libxml2:arm64. Preparing to unpack .../25-libxml2_2.12.7+dfsg+really2.9.14-0.2+b1_arm64.deb ... Unpacking libxml2:arm64 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Selecting previously unselected package gettext. Preparing to unpack .../26-gettext_0.22.5-2_arm64.deb ... Unpacking gettext (0.22.5-2) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../27-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../28-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../29-debhelper_13.20_all.deb ... Unpacking debhelper (13.20) ... Selecting previously unselected package python3-autocommand. Preparing to unpack .../30-python3-autocommand_2.2.2-3_all.deb ... Unpacking python3-autocommand (2.2.2-3) ... Selecting previously unselected package python3-more-itertools. Preparing to unpack .../31-python3-more-itertools_10.5.0-1_all.deb ... Unpacking python3-more-itertools (10.5.0-1) ... Selecting previously unselected package python3-typing-extensions. Preparing to unpack .../32-python3-typing-extensions_4.12.2-2_all.deb ... Unpacking python3-typing-extensions (4.12.2-2) ... Selecting previously unselected package python3-typeguard. Preparing to unpack .../33-python3-typeguard_4.4.1-1_all.deb ... Unpacking python3-typeguard (4.4.1-1) ... Selecting previously unselected package python3-inflect. Preparing to unpack .../34-python3-inflect_7.3.1-2_all.deb ... Unpacking python3-inflect (7.3.1-2) ... Selecting previously unselected package python3-jaraco.context. Preparing to unpack .../35-python3-jaraco.context_6.0.0-1_all.deb ... Unpacking python3-jaraco.context (6.0.0-1) ... Selecting previously unselected package python3-jaraco.functools. Preparing to unpack .../36-python3-jaraco.functools_4.1.0-1_all.deb ... Unpacking python3-jaraco.functools (4.1.0-1) ... Selecting previously unselected package python3-pkg-resources. Preparing to unpack .../37-python3-pkg-resources_74.1.2-2_all.deb ... Unpacking python3-pkg-resources (74.1.2-2) ... Selecting previously unselected package python3-zipp. Preparing to unpack .../38-python3-zipp_3.21.0-1_all.deb ... Unpacking python3-zipp (3.21.0-1) ... Selecting previously unselected package python3-setuptools. Preparing to unpack .../39-python3-setuptools_74.1.2-2_all.deb ... Unpacking python3-setuptools (74.1.2-2) ... Selecting previously unselected package dh-python. Preparing to unpack .../40-dh-python_6.20241024_all.deb ... Unpacking dh-python (6.20241024) ... Selecting previously unselected package python3-all. Preparing to unpack .../41-python3-all_3.12.6-1_arm64.deb ... Unpacking python3-all (3.12.6-1) ... Setting up media-types (10.1.0) ... Setting up libpipeline1:arm64 (1.5.8-1) ... Setting up libkeyutils1:arm64 (1.6.3-4) ... Setting up libicu72:arm64 (72.1-5+b1) ... Setting up bsdextrautils (2.40.2-11) ... Setting up libmagic-mgc (1:5.45-3+b1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libtirpc-common (1.3.4+ds-1.3) ... Setting up libdebhelper-perl (13.20) ... Setting up libmagic1t64:arm64 (1:5.45-3+b1) ... Setting up gettext-base (0.22.5-2) ... Setting up m4 (1.4.19-4) ... Setting up libcom-err2:arm64 (1.47.1-1+b1) ... Setting up file (1:5.45-3+b1) ... Setting up libelf1t64:arm64 (0.192-4) ... Setting up libkrb5support0:arm64 (1.21.3-3) ... Setting up tzdata (2024b-3) ... Current default time zone: 'Etc/UTC' Local time is now: Wed Dec 4 00:52:05 UTC 2024. Universal Time is now: Wed Dec 4 00:52:05 UTC 2024. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up autotools-dev (20220109.1) ... Setting up autopoint (0.22.5-2) ... Setting up libk5crypto3:arm64 (1.21.3-3) ... Setting up autoconf (2.72-3) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.24) ... Setting up libuchardet0:arm64 (0.0.8-1+b2) ... Setting up netbase (6.4) ... Setting up libkrb5-3:arm64 (1.21.3-3) ... Setting up readline-common (8.2-5) ... Setting up libxml2:arm64 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up gettext (0.22.5-2) ... Setting up libtool (2.4.7-8) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up libgssapi-krb5-2:arm64 (1.21.3-3) ... Setting up libreadline8t64:arm64 (8.2-5) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up groff-base (1.23.0-5) ... Setting up libtirpc3t64:arm64 (1.3.4+ds-1.3+b1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libnsl2:arm64 (1.3.0-3+b3) ... Setting up libpython3.12-stdlib:arm64 (3.12.7-3) ... Setting up python3.12 (3.12.7-3) ... Setting up debhelper (13.20) ... Setting up libpython3-stdlib:arm64 (3.12.6-1) ... Setting up python3 (3.12.6-1) ... Setting up python3-zipp (3.21.0-1) ... Setting up python3-autocommand (2.2.2-3) ... Setting up python3-typing-extensions (4.12.2-2) ... Setting up python3-more-itertools (10.5.0-1) ... Setting up python3-jaraco.functools (4.1.0-1) ... Setting up python3-jaraco.context (6.0.0-1) ... Setting up python3-typeguard (4.4.1-1) ... Setting up python3-all (3.12.6-1) ... Setting up python3-inflect (7.3.1-2) ... Setting up python3-pkg-resources (74.1.2-2) ... Setting up python3-setuptools (74.1.2-2) ... Setting up dh-python (6.20241024) ... Processing triggers for libc-bin (2.40-3) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/python-dendropy-4.6.1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../python-dendropy_4.6.1-2_source.changes dpkg-buildpackage: info: source package python-dendropy dpkg-buildpackage: info: source version 4.6.1-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Ananthu C V dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 debian/rules clean dh clean --with python3 --buildsystem=pybuild dh_auto_clean -O--buildsystem=pybuild I: pybuild base:311: python3.12 setup.py clean -setup.py: DendroPy version 4.6.1 -setup.py: using setuptools ('/usr/lib/python3/dist-packages/setuptools/__init__.py') -setup.py: searching for packages -setup.py: packages identified: - dendropy - dendropy.utility - dendropy.simulate - dendropy.model - dendropy.mathlib - dendropy.legacy - dendropy.interop - dendropy.datamodel - dendropy.dataio - dendropy.calculate - dendropy.utility.libexec - dendropy.datamodel.treemodel -setup.py: scripts identified: - applications/sumtrees/sumtrees.py - applications/sumlabels/sumlabels.py - applications/dendropy-format/dendropy-format -setup.py: setuptools command extensions are available running clean removing '/build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build' (and everything under it) 'build/bdist.linux-aarch64' does not exist -- can't clean it 'build/scripts-3.12' does not exist -- can't clean it dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild debian/rules binary dh binary --with python3 --buildsystem=pybuild dh_update_autotools_config -O--buildsystem=pybuild dh_autoreconf -O--buildsystem=pybuild dh_auto_configure -O--buildsystem=pybuild I: pybuild base:311: python3.12 setup.py config -setup.py: DendroPy version 4.6.1 -setup.py: using setuptools ('/usr/lib/python3/dist-packages/setuptools/__init__.py') -setup.py: searching for packages -setup.py: packages identified: - dendropy - dendropy.utility - dendropy.simulate - dendropy.model - dendropy.mathlib - dendropy.legacy - dendropy.interop - dendropy.datamodel - dendropy.dataio - dendropy.calculate - dendropy.utility.libexec - dendropy.datamodel.treemodel -setup.py: scripts identified: - applications/sumtrees/sumtrees.py - applications/sumlabels/sumlabels.py - applications/dendropy-format/dendropy-format -setup.py: setuptools command extensions are available running config dh_auto_build -O--buildsystem=pybuild I: pybuild base:311: /usr/bin/python3 setup.py build -setup.py: DendroPy version 4.6.1 -setup.py: using setuptools ('/usr/lib/python3/dist-packages/setuptools/__init__.py') -setup.py: searching for packages -setup.py: packages identified: - dendropy - dendropy.utility - dendropy.simulate - dendropy.model - dendropy.mathlib - dendropy.legacy - dendropy.interop - dendropy.datamodel - dendropy.dataio - dendropy.calculate - dendropy.utility.libexec - dendropy.datamodel.treemodel -setup.py: scripts identified: - applications/sumtrees/sumtrees.py - applications/sumlabels/sumlabels.py - applications/dendropy-format/dendropy-format -setup.py: setuptools command extensions are available running build running build_py creating /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy copying src/dendropy/__main__.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy copying src/dendropy/__init__.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy creating /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/utility copying src/dendropy/utility/vcsinfo.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/utility copying src/dendropy/utility/urlio.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/utility copying src/dendropy/utility/timeprocessing.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/utility copying src/dendropy/utility/textprocessing.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/utility copying src/dendropy/utility/terminal.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/utility copying src/dendropy/utility/processio.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/utility copying src/dendropy/utility/metavar.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/utility copying src/dendropy/utility/messaging.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/utility copying src/dendropy/utility/filesys.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/utility copying src/dendropy/utility/error.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/utility copying src/dendropy/utility/deprecate.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/utility copying src/dendropy/utility/debug.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/utility copying src/dendropy/utility/container.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/utility copying src/dendropy/utility/constants.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/utility copying src/dendropy/utility/cli.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/utility copying src/dendropy/utility/bitprocessing.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/utility copying src/dendropy/utility/bibtex.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/utility copying src/dendropy/utility/__init__.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/utility creating /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/simulate copying src/dendropy/simulate/treesim.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/simulate copying src/dendropy/simulate/popgensim.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/simulate copying src/dendropy/simulate/charsim.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/simulate copying src/dendropy/simulate/__init__.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/simulate creating /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/model copying src/dendropy/model/treeshape.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/model copying src/dendropy/model/reconcile.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/model copying src/dendropy/model/protractedspeciation.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/model copying src/dendropy/model/parsimony.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/model copying src/dendropy/model/multispeciescoalescent.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/model copying src/dendropy/model/discrete.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/model copying src/dendropy/model/continuous.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/model copying src/dendropy/model/coalescent.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/model copying src/dendropy/model/birthdeath.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/model copying src/dendropy/model/__init__.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/model creating /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/mathlib copying src/dendropy/mathlib/statistics.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/mathlib copying src/dendropy/mathlib/probability.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/mathlib copying src/dendropy/mathlib/mathfn.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/mathlib copying src/dendropy/mathlib/__init__.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/mathlib creating /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/legacy copying src/dendropy/legacy/treesum.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/legacy copying src/dendropy/legacy/treesplit.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/legacy copying src/dendropy/legacy/treesim.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/legacy copying src/dendropy/legacy/treemanip.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/legacy copying src/dendropy/legacy/treecalc.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/legacy copying src/dendropy/legacy/seqsim.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/legacy copying src/dendropy/legacy/seqmodel.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/legacy copying src/dendropy/legacy/reconcile.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/legacy copying src/dendropy/legacy/popgenstat.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/legacy copying src/dendropy/legacy/popgensim.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/legacy copying src/dendropy/legacy/ncbi.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/legacy copying src/dendropy/legacy/continuous.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/legacy copying src/dendropy/legacy/coalescent.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/legacy copying src/dendropy/legacy/__init__.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/legacy creating /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/interop copying src/dendropy/interop/seqgen.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/interop copying src/dendropy/interop/rstats.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/interop copying src/dendropy/interop/rspr.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/interop copying src/dendropy/interop/raxml.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/interop copying src/dendropy/interop/paup.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/interop copying src/dendropy/interop/muscle.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/interop copying src/dendropy/interop/itol.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/interop copying src/dendropy/interop/genbank.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/interop copying src/dendropy/interop/gbif.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/interop copying src/dendropy/interop/ete.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/interop copying src/dendropy/interop/entrez.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/interop copying src/dendropy/interop/biopython.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/interop copying src/dendropy/interop/ape.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/interop copying src/dendropy/interop/__init__.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/interop creating /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/datamodel copying src/dendropy/datamodel/treecollectionmodel.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/datamodel copying src/dendropy/datamodel/taxonmodel.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/datamodel copying src/dendropy/datamodel/datasetmodel.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/datamodel copying src/dendropy/datamodel/charstatemodel.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/datamodel copying src/dendropy/datamodel/charmatrixmodel.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/datamodel copying src/dendropy/datamodel/basemodel.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/datamodel copying src/dendropy/datamodel/__init__.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/datamodel creating /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/dataio copying src/dendropy/dataio/xmlprocessing.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/dataio copying src/dendropy/dataio/tokenizer.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/dataio copying src/dendropy/dataio/phylipwriter.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/dataio copying src/dendropy/dataio/phylipreader.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/dataio copying src/dendropy/dataio/nexusyielder.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/dataio copying src/dendropy/dataio/nexuswriter.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/dataio copying src/dendropy/dataio/nexusreader.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/dataio copying src/dendropy/dataio/nexusprocessing.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/dataio copying src/dendropy/dataio/nexmlyielder.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/dataio copying src/dendropy/dataio/nexmlwriter.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/dataio copying src/dendropy/dataio/nexmlreader.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/dataio copying src/dendropy/dataio/newickyielder.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/dataio copying src/dendropy/dataio/newickwriter.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/dataio copying src/dendropy/dataio/newickreader.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/dataio copying src/dendropy/dataio/newick.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/dataio copying src/dendropy/dataio/multiphylipreader.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/dataio copying src/dendropy/dataio/ioservice.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/dataio copying src/dendropy/dataio/fastawriter.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/dataio copying src/dendropy/dataio/fastareader.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/dataio copying src/dendropy/dataio/__init__.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/dataio creating /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/calculate copying src/dendropy/calculate/treesum.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/calculate copying src/dendropy/calculate/treescore.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/calculate copying src/dendropy/calculate/treemeasure.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/calculate copying src/dendropy/calculate/treecompare.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/calculate copying src/dendropy/calculate/statistics.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/calculate copying src/dendropy/calculate/profiledistance.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/calculate copying src/dendropy/calculate/probability.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/calculate copying src/dendropy/calculate/popgenstat.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/calculate copying src/dendropy/calculate/phylogeneticdistance.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/calculate copying src/dendropy/calculate/mathfn.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/calculate copying src/dendropy/calculate/combinatorics.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/calculate copying src/dendropy/calculate/__init__.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/calculate creating /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/utility/libexec copying src/dendropy/utility/libexec/__init__.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/utility/libexec creating /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/datamodel/treemodel copying src/dendropy/datamodel/treemodel/_tree.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/datamodel/treemodel copying src/dendropy/datamodel/treemodel/_node.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/datamodel/treemodel copying src/dendropy/datamodel/treemodel/_edge.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/datamodel/treemodel copying src/dendropy/datamodel/treemodel/_bipartition.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/datamodel/treemodel copying src/dendropy/datamodel/treemodel/__init__.py -> /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/datamodel/treemodel running egg_info creating src/DendroPy.egg-info writing src/DendroPy.egg-info/PKG-INFO writing dependency_links to src/DendroPy.egg-info/dependency_links.txt writing top-level names to src/DendroPy.egg-info/top_level.txt writing manifest file 'src/DendroPy.egg-info/SOURCES.txt' reading manifest file 'src/DendroPy.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching 'doc/Makefile' warning: no files found matching '*' under directory 'doc/source' warning: no previously-included files matching '.DS_Store' found anywhere in distribution warning: no previously-included files matching '*.pyc' found anywhere in distribution warning: no previously-included files matching '.gitignore' found anywhere in distribution warning: no previously-included files matching '.gitattributes' found anywhere in distribution warning: no previously-included files matching '.idea' found anywhere in distribution warning: no previously-included files matching '__pycache__' found anywhere in distribution adding license file 'LICENSE.rst' adding license file 'AUTHORS.rst' writing manifest file 'src/DendroPy.egg-info/SOURCES.txt' running build_scripts creating build creating build/scripts-3.12 copying and adjusting applications/sumtrees/sumtrees.py -> build/scripts-3.12 copying and adjusting applications/sumlabels/sumlabels.py -> build/scripts-3.12 copying and adjusting applications/dendropy-format/dendropy-format -> build/scripts-3.12 changing mode of build/scripts-3.12/sumtrees.py from 644 to 755 changing mode of build/scripts-3.12/sumlabels.py from 644 to 755 changing mode of build/scripts-3.12/dendropy-format from 644 to 755 dh_auto_test -O--buildsystem=pybuild I: pybuild base:311: cd /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build; python3.12 -m unittest discover -v ---------------------------------------------------------------------- Ran 0 tests in 0.000s NO TESTS RAN create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=pybuild dh_prep -O--buildsystem=pybuild dh_auto_install -O--buildsystem=pybuild I: pybuild base:311: /usr/bin/python3 setup.py install --root /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy -setup.py: DendroPy version 4.6.1 -setup.py: using setuptools ('/usr/lib/python3/dist-packages/setuptools/__init__.py') -setup.py: searching for packages -setup.py: packages identified: - dendropy - dendropy.utility - dendropy.simulate - dendropy.model - dendropy.mathlib - dendropy.legacy - dendropy.interop - dendropy.datamodel - dendropy.dataio - dendropy.calculate - dendropy.utility.libexec - dendropy.datamodel.treemodel -setup.py: scripts identified: - applications/sumtrees/sumtrees.py - applications/sumlabels/sumlabels.py - applications/dendropy-format/dendropy-format -setup.py: setuptools command extensions are available running install /usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. !! ******************************************************************************** Please avoid running ``setup.py`` directly. Instead, use pypa/build, pypa/installer or other standards-based tools. See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. ******************************************************************************** !! self.initialize_options() running build running build_py running egg_info writing src/DendroPy.egg-info/PKG-INFO writing dependency_links to src/DendroPy.egg-info/dependency_links.txt writing top-level names to src/DendroPy.egg-info/top_level.txt reading manifest file 'src/DendroPy.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching 'doc/Makefile' warning: no files found matching '*' under directory 'doc/source' warning: no previously-included files matching '.DS_Store' found anywhere in distribution warning: no previously-included files matching '*.pyc' found anywhere in distribution warning: no previously-included files matching '.gitignore' found anywhere in distribution warning: no previously-included files matching '.gitattributes' found anywhere in distribution warning: no previously-included files matching '.idea' found anywhere in distribution warning: no previously-included files matching '__pycache__' found anywhere in distribution adding license file 'LICENSE.rst' adding license file 'AUTHORS.rst' writing manifest file 'src/DendroPy.egg-info/SOURCES.txt' running build_scripts running install_lib creating /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy creating /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr creating /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib creating /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12 creating /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages creating /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy creating /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/__pycache__ copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/__pycache__ creating /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/calculate creating /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/calculate/__pycache__ copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/calculate/__pycache__/treesum.cpython-312.pyc -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/calculate/__pycache__ copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/calculate/__pycache__/popgenstat.cpython-312.pyc -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/calculate/__pycache__ copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/calculate/__pycache__/treescore.cpython-312.pyc -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/calculate/__pycache__ copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/calculate/__pycache__/treemeasure.cpython-312.pyc -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/calculate/__pycache__ copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/calculate/__pycache__/treecompare.cpython-312.pyc -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/calculate/__pycache__ copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/calculate/__pycache__/phylogeneticdistance.cpython-312.pyc -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/calculate/__pycache__ copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/calculate/__pycache__/combinatorics.cpython-312.pyc -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/calculate/__pycache__ copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/calculate/__pycache__/probability.cpython-312.pyc -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/calculate/__pycache__ copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/calculate/__pycache__/statistics.cpython-312.pyc -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/calculate/__pycache__ copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/calculate/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/calculate/__pycache__ copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/calculate/__init__.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/calculate copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/calculate/combinatorics.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/calculate copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/calculate/mathfn.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/calculate copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/calculate/phylogeneticdistance.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/calculate copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/calculate/popgenstat.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/calculate copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/calculate/probability.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/calculate copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/calculate/profiledistance.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/calculate copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/calculate/statistics.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/calculate copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/calculate/treecompare.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/calculate copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/calculate/treemeasure.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/calculate copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/calculate/treescore.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/calculate copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/calculate/treesum.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/calculate creating /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/dataio creating /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/dataio/__pycache__ copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/dataio/__pycache__/multiphylipreader.cpython-312.pyc -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/dataio/__pycache__ copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/dataio/__pycache__/phylipwriter.cpython-312.pyc -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/dataio/__pycache__ copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/dataio/__pycache__/phylipreader.cpython-312.pyc -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/dataio/__pycache__ copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/dataio/__pycache__/nexmlyielder.cpython-312.pyc -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/dataio/__pycache__ copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/dataio/__pycache__/nexmlwriter.cpython-312.pyc -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/dataio/__pycache__ copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/dataio/__pycache__/xmlprocessing.cpython-312.pyc -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/dataio/__pycache__ copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/dataio/__pycache__/nexmlreader.cpython-312.pyc -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/dataio/__pycache__ copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/dataio/__pycache__/nexusyielder.cpython-312.pyc -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/dataio/__pycache__ copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/dataio/__pycache__/newick.cpython-312.pyc -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/dataio/__pycache__ copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/dataio/__pycache__/nexuswriter.cpython-312.pyc -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/dataio/__pycache__ copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/dataio/__pycache__/nexusreader.cpython-312.pyc -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/dataio/__pycache__ copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/dataio/__pycache__/fastawriter.cpython-312.pyc -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/dataio/__pycache__ copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/dataio/__pycache__/fastareader.cpython-312.pyc -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/dataio/__pycache__ copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/dataio/__pycache__/newickyielder.cpython-312.pyc -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/dataio/__pycache__ copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/dataio/__pycache__/newickwriter.cpython-312.pyc -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/dataio/__pycache__ copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/dataio/__pycache__/ioservice.cpython-312.pyc -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/dataio/__pycache__ copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/dataio/__pycache__/nexusprocessing.cpython-312.pyc -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/dataio/__pycache__ copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/dataio/__pycache__/tokenizer.cpython-312.pyc -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/dataio/__pycache__ copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/dataio/__pycache__/newickreader.cpython-312.pyc -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/dataio/__pycache__ copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/dataio/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/dataio/__pycache__ copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/dataio/__init__.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/dataio copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/dataio/fastareader.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/dataio copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/dataio/fastawriter.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/dataio copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/dataio/ioservice.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/dataio copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/dataio/multiphylipreader.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/dataio copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/dataio/newick.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/dataio copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/dataio/newickreader.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/dataio copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/dataio/newickwriter.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/dataio copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/dataio/newickyielder.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/dataio copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/dataio/nexmlreader.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/dataio copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/dataio/nexmlwriter.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/dataio copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/dataio/nexmlyielder.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/dataio copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/dataio/nexusprocessing.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/dataio copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/dataio/nexusreader.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/dataio copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/dataio/nexuswriter.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/dataio copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/dataio/nexusyielder.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/dataio copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/dataio/phylipreader.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/dataio copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/dataio/phylipwriter.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/dataio copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/dataio/tokenizer.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/dataio copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/dataio/xmlprocessing.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/dataio creating /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/datamodel creating /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/datamodel/__pycache__ copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/datamodel/__pycache__/datasetmodel.cpython-312.pyc -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/datamodel/__pycache__ copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/datamodel/__pycache__/charmatrixmodel.cpython-312.pyc -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/datamodel/__pycache__ copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/datamodel/__pycache__/treecollectionmodel.cpython-312.pyc -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/datamodel/__pycache__ copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/datamodel/__pycache__/charstatemodel.cpython-312.pyc -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/datamodel/__pycache__ copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/datamodel/__pycache__/taxonmodel.cpython-312.pyc -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/datamodel/__pycache__ copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/datamodel/__pycache__/basemodel.cpython-312.pyc -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/datamodel/__pycache__ copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/datamodel/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/datamodel/__pycache__ creating /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/datamodel/treemodel creating /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/datamodel/treemodel/__pycache__ copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/datamodel/treemodel/__pycache__/_tree.cpython-312.pyc -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/datamodel/treemodel/__pycache__ copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/datamodel/treemodel/__pycache__/_node.cpython-312.pyc -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/datamodel/treemodel/__pycache__ copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/datamodel/treemodel/__pycache__/_edge.cpython-312.pyc -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/datamodel/treemodel/__pycache__ copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/datamodel/treemodel/__pycache__/_bipartition.cpython-312.pyc -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/datamodel/treemodel/__pycache__ copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/datamodel/treemodel/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/datamodel/treemodel/__pycache__ copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/datamodel/treemodel/__init__.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/datamodel/treemodel copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/datamodel/treemodel/_bipartition.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/datamodel/treemodel copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/datamodel/treemodel/_edge.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/datamodel/treemodel copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/datamodel/treemodel/_node.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/datamodel/treemodel copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/datamodel/treemodel/_tree.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/datamodel/treemodel copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/datamodel/__init__.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/datamodel copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/datamodel/basemodel.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/datamodel copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/datamodel/charmatrixmodel.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/datamodel copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/datamodel/charstatemodel.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/datamodel copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/datamodel/datasetmodel.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/datamodel copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/datamodel/taxonmodel.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/datamodel copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/datamodel/treecollectionmodel.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/datamodel creating /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/interop creating /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/interop/__pycache__ copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/interop/__pycache__/seqgen.cpython-312.pyc -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/interop/__pycache__ copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/interop/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/interop/__pycache__ copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/interop/__init__.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/interop copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/interop/ape.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/interop copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/interop/biopython.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/interop copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/interop/entrez.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/interop copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/interop/ete.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/interop copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/interop/gbif.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/interop copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/interop/genbank.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/interop copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/interop/itol.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/interop copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/interop/muscle.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/interop copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/interop/paup.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/interop copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/interop/raxml.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/interop copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/interop/rspr.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/interop copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/interop/rstats.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/interop copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/interop/seqgen.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/interop creating /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/legacy creating /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/legacy/__pycache__ copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/legacy/__pycache__/treesum.cpython-312.pyc -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/legacy/__pycache__ copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/legacy/__pycache__/treesplit.cpython-312.pyc -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/legacy/__pycache__ copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/legacy/__pycache__/treesim.cpython-312.pyc -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/legacy/__pycache__ copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/legacy/__pycache__/treemanip.cpython-312.pyc -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/legacy/__pycache__ copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/legacy/__pycache__/seqsim.cpython-312.pyc -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/legacy/__pycache__ copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/legacy/__pycache__/seqmodel.cpython-312.pyc -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/legacy/__pycache__ copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/legacy/__pycache__/reconcile.cpython-312.pyc -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/legacy/__pycache__ copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/legacy/__pycache__/popgenstat.cpython-312.pyc -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/legacy/__pycache__ copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/legacy/__pycache__/popgensim.cpython-312.pyc -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/legacy/__pycache__ copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/legacy/__pycache__/treecalc.cpython-312.pyc -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/legacy/__pycache__ copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/legacy/__pycache__/continuous.cpython-312.pyc -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/legacy/__pycache__ copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/legacy/__pycache__/coalescent.cpython-312.pyc -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/legacy/__pycache__ copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/legacy/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/legacy/__pycache__ copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/legacy/__init__.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/legacy copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/legacy/coalescent.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/legacy copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/legacy/continuous.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/legacy copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/legacy/ncbi.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/legacy copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/legacy/popgensim.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/legacy copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/legacy/popgenstat.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/legacy copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/legacy/reconcile.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/legacy copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/legacy/seqmodel.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/legacy copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/legacy/seqsim.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/legacy copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/legacy/treecalc.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/legacy copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/legacy/treemanip.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/legacy copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/legacy/treesim.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/legacy copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/legacy/treesplit.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/legacy copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/legacy/treesum.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/legacy creating /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/mathlib creating /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/mathlib/__pycache__ copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/mathlib/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/mathlib/__pycache__ copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/mathlib/__init__.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/mathlib copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/mathlib/mathfn.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/mathlib copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/mathlib/probability.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/mathlib copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/mathlib/statistics.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/mathlib creating /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/model creating /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/model/__pycache__ copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/model/__pycache__/reconcile.cpython-312.pyc -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/model/__pycache__ copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/model/__pycache__/discrete.cpython-312.pyc -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/model/__pycache__ copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/model/__pycache__/treeshape.cpython-312.pyc -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/model/__pycache__ copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/model/__pycache__/birthdeath.cpython-312.pyc -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/model/__pycache__ copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/model/__pycache__/parsimony.cpython-312.pyc -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/model/__pycache__ copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/model/__pycache__/continuous.cpython-312.pyc -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/model/__pycache__ copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/model/__pycache__/coalescent.cpython-312.pyc -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/model/__pycache__ copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/model/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/model/__pycache__ copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/model/__init__.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/model copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/model/birthdeath.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/model copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/model/coalescent.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/model copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/model/continuous.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/model copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/model/discrete.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/model copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/model/multispeciescoalescent.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/model copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/model/parsimony.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/model copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/model/protractedspeciation.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/model copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/model/reconcile.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/model copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/model/treeshape.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/model creating /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/simulate creating /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/simulate/__pycache__ copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/simulate/__pycache__/popgensim.cpython-312.pyc -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/simulate/__pycache__ copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/simulate/__pycache__/charsim.cpython-312.pyc -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/simulate/__pycache__ copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/simulate/__pycache__/treesim.cpython-312.pyc -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/simulate/__pycache__ copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/simulate/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/simulate/__pycache__ copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/simulate/__init__.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/simulate copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/simulate/charsim.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/simulate copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/simulate/popgensim.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/simulate copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/simulate/treesim.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/simulate creating /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/utility creating /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/utility/__pycache__ copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/utility/__pycache__/processio.cpython-312.pyc -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/utility/__pycache__ copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/utility/__pycache__/constants.cpython-312.pyc -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/utility/__pycache__ copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/utility/__pycache__/terminal.cpython-312.pyc -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/utility/__pycache__ copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/utility/__pycache__/messaging.cpython-312.pyc -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/utility/__pycache__ copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/utility/__pycache__/filesys.cpython-312.pyc -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/utility/__pycache__ copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/utility/__pycache__/bitprocessing.cpython-312.pyc -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/utility/__pycache__ copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/utility/__pycache__/urlio.cpython-312.pyc -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/utility/__pycache__ copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/utility/__pycache__/bibtex.cpython-312.pyc -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/utility/__pycache__ copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/utility/__pycache__/container.cpython-312.pyc -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/utility/__pycache__ copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/utility/__pycache__/textprocessing.cpython-312.pyc -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/utility/__pycache__ copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/utility/__pycache__/metavar.cpython-312.pyc -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/utility/__pycache__ copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/utility/__pycache__/deprecate.cpython-312.pyc -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/utility/__pycache__ copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/utility/__pycache__/error.cpython-312.pyc -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/utility/__pycache__ copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/utility/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/utility/__pycache__ creating /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/utility/libexec creating /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/utility/libexec/__pycache__ copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/utility/libexec/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/utility/libexec/__pycache__ copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/utility/libexec/__init__.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/utility/libexec copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/utility/__init__.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/utility copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/utility/bibtex.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/utility copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/utility/bitprocessing.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/utility copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/utility/cli.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/utility copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/utility/constants.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/utility copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/utility/container.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/utility copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/utility/debug.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/utility copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/utility/deprecate.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/utility copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/utility/error.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/utility copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/utility/filesys.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/utility copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/utility/messaging.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/utility copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/utility/metavar.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/utility copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/utility/processio.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/utility copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/utility/terminal.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/utility copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/utility/textprocessing.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/utility copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/utility/timeprocessing.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/utility copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/utility/urlio.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/utility copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/utility/vcsinfo.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/utility copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/__init__.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy copying /build/reproducible-path/python-dendropy-4.6.1/.pybuild/cpython3_3.12_dendropy/build/dendropy/__main__.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/calculate/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/calculate/combinatorics.py to combinatorics.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/calculate/mathfn.py to mathfn.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/calculate/phylogeneticdistance.py to phylogeneticdistance.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/calculate/popgenstat.py to popgenstat.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/calculate/probability.py to probability.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/calculate/profiledistance.py to profiledistance.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/calculate/statistics.py to statistics.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/calculate/treecompare.py to treecompare.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/calculate/treemeasure.py to treemeasure.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/calculate/treescore.py to treescore.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/calculate/treesum.py to treesum.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/dataio/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/dataio/fastareader.py to fastareader.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/dataio/fastawriter.py to fastawriter.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/dataio/ioservice.py to ioservice.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/dataio/multiphylipreader.py to multiphylipreader.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/dataio/newick.py to newick.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/dataio/newickreader.py to newickreader.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/dataio/newickwriter.py to newickwriter.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/dataio/newickyielder.py to newickyielder.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/dataio/nexmlreader.py to nexmlreader.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/dataio/nexmlwriter.py to nexmlwriter.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/dataio/nexmlyielder.py to nexmlyielder.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/dataio/nexusprocessing.py to nexusprocessing.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/dataio/nexusreader.py to nexusreader.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/dataio/nexuswriter.py to nexuswriter.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/dataio/nexusyielder.py to nexusyielder.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/dataio/phylipreader.py to phylipreader.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/dataio/phylipwriter.py to phylipwriter.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/dataio/tokenizer.py to tokenizer.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/dataio/xmlprocessing.py to xmlprocessing.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/datamodel/treemodel/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/datamodel/treemodel/_bipartition.py to _bipartition.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/datamodel/treemodel/_edge.py to _edge.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/datamodel/treemodel/_node.py to _node.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/datamodel/treemodel/_tree.py to _tree.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/datamodel/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/datamodel/basemodel.py to basemodel.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/datamodel/charmatrixmodel.py to charmatrixmodel.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/datamodel/charstatemodel.py to charstatemodel.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/datamodel/datasetmodel.py to datasetmodel.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/datamodel/taxonmodel.py to taxonmodel.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/datamodel/treecollectionmodel.py to treecollectionmodel.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/interop/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/interop/ape.py to ape.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/interop/biopython.py to biopython.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/interop/entrez.py to entrez.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/interop/ete.py to ete.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/interop/gbif.py to gbif.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/interop/genbank.py to genbank.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/interop/itol.py to itol.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/interop/muscle.py to muscle.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/interop/paup.py to paup.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/interop/raxml.py to raxml.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/interop/rspr.py to rspr.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/interop/rstats.py to rstats.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/interop/seqgen.py to seqgen.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/legacy/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/legacy/coalescent.py to coalescent.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/legacy/continuous.py to continuous.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/legacy/ncbi.py to ncbi.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/legacy/popgensim.py to popgensim.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/legacy/popgenstat.py to popgenstat.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/legacy/reconcile.py to reconcile.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/legacy/seqmodel.py to seqmodel.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/legacy/seqsim.py to seqsim.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/legacy/treecalc.py to treecalc.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/legacy/treemanip.py to treemanip.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/legacy/treesim.py to treesim.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/legacy/treesplit.py to treesplit.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/legacy/treesum.py to treesum.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/mathlib/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/mathlib/mathfn.py to mathfn.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/mathlib/probability.py to probability.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/mathlib/statistics.py to statistics.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/model/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/model/birthdeath.py to birthdeath.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/model/coalescent.py to coalescent.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/model/continuous.py to continuous.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/model/discrete.py to discrete.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/model/multispeciescoalescent.py to multispeciescoalescent.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/model/parsimony.py to parsimony.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/model/protractedspeciation.py to protractedspeciation.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/model/reconcile.py to reconcile.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/model/treeshape.py to treeshape.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/simulate/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/simulate/charsim.py to charsim.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/simulate/popgensim.py to popgensim.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/simulate/treesim.py to treesim.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/utility/libexec/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/utility/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/utility/bibtex.py to bibtex.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/utility/bitprocessing.py to bitprocessing.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/utility/cli.py to cli.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/utility/constants.py to constants.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/utility/container.py to container.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/utility/debug.py to debug.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/utility/deprecate.py to deprecate.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/utility/error.py to error.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/utility/filesys.py to filesys.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/utility/messaging.py to messaging.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/utility/metavar.py to metavar.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/utility/processio.py to processio.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/utility/terminal.py to terminal.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/utility/textprocessing.py to textprocessing.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/utility/timeprocessing.py to timeprocessing.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/utility/urlio.py to urlio.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/utility/vcsinfo.py to vcsinfo.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/dendropy/__main__.py to __main__.cpython-312.pyc running install_egg_info Copying src/DendroPy.egg-info to /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/lib/python3.12/dist-packages/DendroPy-4.6.1.egg-info Skipping SOURCES.txt running install_scripts creating /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/bin copying build/scripts-3.12/dendropy-format -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/bin copying build/scripts-3.12/sumlabels.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/bin copying build/scripts-3.12/sumtrees.py -> /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/bin changing mode of /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/bin/dendropy-format to 755 changing mode of /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/bin/sumlabels.py to 755 changing mode of /build/reproducible-path/python-dendropy-4.6.1/debian/python3-dendropy/usr/bin/sumtrees.py to 755 debian/rules override_dh_install make[1]: Entering directory '/build/reproducible-path/python-dendropy-4.6.1' dh_install mkdir -p debian/sumtrees/usr/bin mv debian/python3-dendropy/usr/bin/sumtrees.py debian/sumtrees/usr/bin/sumtrees cp applications/dendropy-format/dendropy-format debian/sumtrees/usr/bin/dendropy-format rm -rf debian/python3-dendropy/usr/bin make[1]: Leaving directory '/build/reproducible-path/python-dendropy-4.6.1' dh_installdocs -O--buildsystem=pybuild dh_installchangelogs -O--buildsystem=pybuild dh_installexamples -O--buildsystem=pybuild dh_installman -O--buildsystem=pybuild dh_python3 -O--buildsystem=pybuild I: dh_python3 tools:113: replacing shebang in debian/sumtrees/usr/bin/dendropy-format dh_installsystemduser -O--buildsystem=pybuild dh_perl -O--buildsystem=pybuild dh_link -O--buildsystem=pybuild dh_strip_nondeterminism -O--buildsystem=pybuild dh_compress -O--buildsystem=pybuild dh_fixperms -O--buildsystem=pybuild dh_missing -O--buildsystem=pybuild dh_installdeb -O--buildsystem=pybuild dh_gencontrol -O--buildsystem=pybuild dpkg-gencontrol: warning: Depends field of package python3-dendropy: substitution variable ${shlibs:Depends} used, but is not defined dpkg-gencontrol: warning: Depends field of package sumtrees: substitution variable ${shlibs:Depends} used, but is not defined dh_md5sums -O--buildsystem=pybuild dh_builddeb -O--buildsystem=pybuild dpkg-deb: building package 'python3-dendropy' in '../python3-dendropy_4.6.1-2_all.deb'. dpkg-deb: building package 'sumtrees' in '../sumtrees_4.6.1-2_all.deb'. dpkg-genbuildinfo --build=binary -O../python-dendropy_4.6.1-2_arm64.buildinfo dpkg-genchanges --build=binary -O../python-dendropy_4.6.1-2_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/452724 and its subdirectories I: Current time: Tue Dec 3 12:52:25 -12 2024 I: pbuilder-time-stamp: 1733273545 Wed Dec 4 00:52:27 UTC 2024 I: 1st build successful. Starting 2nd build on remote node codethink01-arm64.debian.net. Wed Dec 4 00:52:27 UTC 2024 I: Preparing to do remote build '2' on codethink01-arm64.debian.net. Wed Dec 4 00:53:11 UTC 2024 I: Deleting $TMPDIR on codethink01-arm64.debian.net. Wed Dec 4 00:53:12 UTC 2024 I: python-dendropy_4.6.1-2_arm64.changes: Format: 1.8 Date: Sun, 01 Dec 2024 18:23:25 +0530 Source: python-dendropy Binary: python3-dendropy sumtrees Architecture: all Version: 4.6.1-2 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Ananthu C V Description: python3-dendropy - DendroPy Phylogenetic Computing Library (Python 3) sumtrees - Phylogenetic Tree Summarization and Annotation Closes: 1083625 Changes: python-dendropy (4.6.1-2) unstable; urgency=medium . * Team upload. * Add patch to drop runtime dependency on pkg_resources (Closes: #1083625) * Bump standards version to 4.7.0 (no changes needed) * Correct patch header metadata * Recreate and improve dendropy-format manpage * Point homepage to the package documentation Checksums-Sha1: 5349dfd5fb14077cd7e4af1814e18169efe0f315 6061 python-dendropy_4.6.1-2_arm64.buildinfo 1dfd8bc3450f8bb8c5ea96b0966535fe92873b4f 276852 python3-dendropy_4.6.1-2_all.deb 2495f31633044a920c0a224ed316d1bceee81594 184768 sumtrees_4.6.1-2_all.deb Checksums-Sha256: 7478e5d1a909db5dc6038f536e05c55d14a852df994b1d8be5c66e04d38e41af 6061 python-dendropy_4.6.1-2_arm64.buildinfo 8c966902632aa332636a0558c66ac8d50369eb4f437918108145c3847f85029a 276852 python3-dendropy_4.6.1-2_all.deb f4fa304b53dcc4618eaa3d7b34bcc73752f8c8a7543e17ed91808dce15f7a7c6 184768 sumtrees_4.6.1-2_all.deb Files: 5e4aad20004be24e51e3ec75a21fdc52 6061 python optional python-dendropy_4.6.1-2_arm64.buildinfo a4c3b09469b7527b3f3377ca88b995e5 276852 python optional python3-dendropy_4.6.1-2_all.deb 5922306f084f6a3429d699ef7b0d93d3 184768 python optional sumtrees_4.6.1-2_all.deb Wed Dec 4 00:53:13 UTC 2024 I: diffoscope 283 will be used to compare the two builds: Running as unit: rb-diffoscope-arm64_4-47368.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.Ubj90E6t/python-dendropy_4.6.1-2.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.Ubj90E6t/python-dendropy_4.6.1-2.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.Ubj90E6t/python-dendropy_4.6.1-2.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.Ubj90E6t/b1/python-dendropy_4.6.1-2_arm64.changes /srv/reproducible-results/rbuild-debian/r-b-build.Ubj90E6t/b2/python-dendropy_4.6.1-2_arm64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.355s) 0.355s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.020s) 0.020s 12 calls diffoscope.comparators.binary.FilesystemFile ## specialize (total time: 0.000s) 0.000s 1 call specialize Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 726ms CPU time consumed: 704ms Wed Dec 4 00:53:14 UTC 2024 I: diffoscope 283 found no differences in the changes files, and a .buildinfo file also exists. Wed Dec 4 00:53:14 UTC 2024 I: python-dendropy from trixie built successfully and reproducibly on arm64. Wed Dec 4 00:53:16 UTC 2024 I: Submitting .buildinfo files to external archives: Wed Dec 4 00:53:16 UTC 2024 I: Submitting 8.0K b1/python-dendropy_4.6.1-2_arm64.buildinfo.asc Wed Dec 4 00:53:16 UTC 2024 I: Submitting 8.0K b2/python-dendropy_4.6.1-2_arm64.buildinfo.asc Wed Dec 4 00:53:17 UTC 2024 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Wed Dec 4 00:53:17 UTC 2024 I: Done submitting .buildinfo files. Wed Dec 4 00:53:17 UTC 2024 I: Removing signed python-dendropy_4.6.1-2_arm64.buildinfo.asc files: removed './b1/python-dendropy_4.6.1-2_arm64.buildinfo.asc' removed './b2/python-dendropy_4.6.1-2_arm64.buildinfo.asc'