Wed May 8 09:10:39 UTC 2024 I: starting to build pullseq/trixie/arm64 on jenkins on '2024-05-08 09:10' Wed May 8 09:10:39 UTC 2024 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/arm64_24/34131/console.log Wed May 8 09:10:39 UTC 2024 I: Downloading source for trixie/pullseq=1.0.2-5 --2024-05-08 09:10:39-- http://deb.debian.org/debian/pool/main/p/pullseq/pullseq_1.0.2-5.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 1348 (1.3K) [text/prs.lines.tag] Saving to: ‘pullseq_1.0.2-5.dsc’ 0K . 100% 190M=0s 2024-05-08 09:10:39 (190 MB/s) - ‘pullseq_1.0.2-5.dsc’ saved [1348/1348] Wed May 8 09:10:39 UTC 2024 I: pullseq_1.0.2-5.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: pullseq Binary: pullseq Architecture: any Version: 1.0.2-5 Maintainer: Debian Med Packaging Team Uploaders: Nilesh Patra Homepage: https://github.com/bcthomas/pullseq Standards-Version: 4.6.0 Vcs-Browser: https://salsa.debian.org/med-team/pullseq Vcs-Git: https://salsa.debian.org/med-team/pullseq.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13), libpcre2-dev, zlib1g-dev Package-List: pullseq deb science optional arch=any Checksums-Sha1: fcfc4b994c29cb5b504c8e7503eba12d569d454e 1408480 pullseq_1.0.2.orig.tar.gz 8b9ef948f1b3e124eba973e83104c1d194beece7 8904 pullseq_1.0.2-5.debian.tar.xz Checksums-Sha256: a295d7e0e2d64ed05d293d795d1716376707e465f2c42ede6454f27db586c85f 1408480 pullseq_1.0.2.orig.tar.gz dafe4c70393b358df0c2ce5eb0f79eda52344ca860a5ca6f8dcf8570e11deaca 8904 pullseq_1.0.2-5.debian.tar.xz Files: a4ef6e5b4b5c77be2ef5d444c44fb6c0 1408480 pullseq_1.0.2.orig.tar.gz a3c2152af3d00472ac5042ee0e5368eb 8904 pullseq_1.0.2-5.debian.tar.xz -----BEGIN PGP SIGNATURE----- iHUEARYIAB0WIQSglbZu4JAkvuai8HIqJ5BL1yQ+2gUCZfNqCAAKCRAqJ5BL1yQ+ 2uDUAP9p6beVcqjYofyUgsCmVPr6U/yqhV9lvusLRGcCOYBfVQD9FrC468ldqD/B iQJlLfPdrc2K87/jY3zUcB9f5joSLQU= =Xvzr -----END PGP SIGNATURE----- Wed May 8 09:10:40 UTC 2024 I: Checking whether the package is not for us Wed May 8 09:10:40 UTC 2024 I: Starting 1st build on remote node codethink04-arm64.debian.net. Wed May 8 09:10:40 UTC 2024 I: Preparing to do remote build '1' on codethink04-arm64.debian.net. Wed May 8 09:11:29 UTC 2024 I: Deleting $TMPDIR on codethink04-arm64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Tue May 7 21:10:42 -12 2024 I: pbuilder-time-stamp: 1715159442 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [pullseq_1.0.2-5.dsc] I: copying [./pullseq_1.0.2.orig.tar.gz] I: copying [./pullseq_1.0.2-5.debian.tar.xz] I: Extracting source gpgv: Signature made Thu Mar 14 21:20:08 2024 gpgv: using EDDSA key A095B66EE09024BEE6A2F0722A27904BD7243EDA gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./pullseq_1.0.2-5.dsc: no acceptable signature found dpkg-source: info: extracting pullseq in pullseq-1.0.2 dpkg-source: info: unpacking pullseq_1.0.2.orig.tar.gz dpkg-source: info: unpacking pullseq_1.0.2-5.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying pcre2.patch dpkg-source: info: applying getc.patch dpkg-source: info: applying fixup-implicit-function-declaration.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/1097729/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='arm64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' DISTRIBUTION='trixie' HOME='/root' HOST_ARCH='arm64' IFS=' ' INVOCATION_ID='261c24894ef0481ebcd878529f961753' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='1097729' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.XvRRj6cf/pbuilderrc_l9jB --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.XvRRj6cf/b1 --logfile b1/build.log pullseq_1.0.2-5.dsc' SUDO_GID='109' SUDO_UID='104' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://192.168.101.4:3128' I: uname -a Linux codethink04-arm64 6.1.0-21-cloud-arm64 #1 SMP Debian 6.1.90-1 (2024-05-03) aarch64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 May 5 11:23 /bin -> usr/bin I: user script /srv/workspace/pbuilder/1097729/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: arm64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), libpcre2-dev, zlib1g-dev dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19743 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on libpcre2-dev; however: Package libpcre2-dev is not installed. pbuilder-satisfydepends-dummy depends on zlib1g-dev; however: Package zlib1g-dev is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libdebhelper-perl{a} libelf1t64{a} libfile-stripnondeterminism-perl{a} libicu72{a} libmagic-mgc{a} libmagic1t64{a} libpcre2-16-0{a} libpcre2-32-0{a} libpcre2-dev{a} libpcre2-posix3{a} libpipeline1{a} libsub-override-perl{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 35 newly installed, 0 to remove and 0 not upgraded. Need to get 20.7 MB of archives. After unpacking 80.9 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main arm64 sensible-utils all 0.0.22 [22.4 kB] Get: 2 http://deb.debian.org/debian trixie/main arm64 libmagic-mgc arm64 1:5.45-3 [314 kB] Get: 3 http://deb.debian.org/debian trixie/main arm64 libmagic1t64 arm64 1:5.45-3 [100 kB] Get: 4 http://deb.debian.org/debian trixie/main arm64 file arm64 1:5.45-3 [43.0 kB] Get: 5 http://deb.debian.org/debian trixie/main arm64 gettext-base arm64 0.21-14+b1 [160 kB] Get: 6 http://deb.debian.org/debian trixie/main arm64 libuchardet0 arm64 0.0.8-1+b1 [69.0 kB] Get: 7 http://deb.debian.org/debian trixie/main arm64 groff-base arm64 1.23.0-4 [1130 kB] Get: 8 http://deb.debian.org/debian trixie/main arm64 bsdextrautils arm64 2.40-8 [93.0 kB] Get: 9 http://deb.debian.org/debian trixie/main arm64 libpipeline1 arm64 1.5.7-2 [36.5 kB] Get: 10 http://deb.debian.org/debian trixie/main arm64 man-db arm64 2.12.1-1 [1394 kB] Get: 11 http://deb.debian.org/debian trixie/main arm64 m4 arm64 1.4.19-4 [277 kB] Get: 12 http://deb.debian.org/debian trixie/main arm64 autoconf all 2.71-3 [332 kB] Get: 13 http://deb.debian.org/debian trixie/main arm64 autotools-dev all 20220109.1 [51.6 kB] Get: 14 http://deb.debian.org/debian trixie/main arm64 automake all 1:1.16.5-1.3 [823 kB] Get: 15 http://deb.debian.org/debian trixie/main arm64 autopoint all 0.21-14 [496 kB] Get: 16 http://deb.debian.org/debian trixie/main arm64 libdebhelper-perl all 13.15.3 [88.0 kB] Get: 17 http://deb.debian.org/debian trixie/main arm64 libtool all 2.4.7-7 [517 kB] Get: 18 http://deb.debian.org/debian trixie/main arm64 dh-autoreconf all 20 [17.1 kB] Get: 19 http://deb.debian.org/debian trixie/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 20 http://deb.debian.org/debian trixie/main arm64 libsub-override-perl all 0.10-1 [10.6 kB] Get: 21 http://deb.debian.org/debian trixie/main arm64 libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get: 22 http://deb.debian.org/debian trixie/main arm64 dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get: 23 http://deb.debian.org/debian trixie/main arm64 libelf1t64 arm64 0.191-1+b1 [187 kB] Get: 24 http://deb.debian.org/debian trixie/main arm64 dwz arm64 0.15-1+b1 [102 kB] Get: 25 http://deb.debian.org/debian trixie/main arm64 libicu72 arm64 72.1-4+b1 [9224 kB] Get: 26 http://deb.debian.org/debian trixie/main arm64 libxml2 arm64 2.9.14+dfsg-1.3+b3 [624 kB] Get: 27 http://deb.debian.org/debian trixie/main arm64 gettext arm64 0.21-14+b1 [1249 kB] Get: 28 http://deb.debian.org/debian trixie/main arm64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 29 http://deb.debian.org/debian trixie/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 30 http://deb.debian.org/debian trixie/main arm64 debhelper all 13.15.3 [901 kB] Get: 31 http://deb.debian.org/debian trixie/main arm64 libpcre2-16-0 arm64 10.42-4+b1 [217 kB] Get: 32 http://deb.debian.org/debian trixie/main arm64 libpcre2-32-0 arm64 10.42-4+b1 [207 kB] Get: 33 http://deb.debian.org/debian trixie/main arm64 libpcre2-posix3 arm64 10.42-4+b1 [55.8 kB] Get: 34 http://deb.debian.org/debian trixie/main arm64 libpcre2-dev arm64 10.42-4+b1 [669 kB] Get: 35 http://deb.debian.org/debian trixie/main arm64 zlib1g-dev arm64 1:1.3.dfsg-3.1 [915 kB] Fetched 20.7 MB in 0s (217 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19743 files and directories currently installed.) Preparing to unpack .../00-sensible-utils_0.0.22_all.deb ... Unpacking sensible-utils (0.0.22) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../01-libmagic-mgc_1%3a5.45-3_arm64.deb ... Unpacking libmagic-mgc (1:5.45-3) ... Selecting previously unselected package libmagic1t64:arm64. Preparing to unpack .../02-libmagic1t64_1%3a5.45-3_arm64.deb ... Unpacking libmagic1t64:arm64 (1:5.45-3) ... Selecting previously unselected package file. Preparing to unpack .../03-file_1%3a5.45-3_arm64.deb ... Unpacking file (1:5.45-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../04-gettext-base_0.21-14+b1_arm64.deb ... Unpacking gettext-base (0.21-14+b1) ... Selecting previously unselected package libuchardet0:arm64. Preparing to unpack .../05-libuchardet0_0.0.8-1+b1_arm64.deb ... Unpacking libuchardet0:arm64 (0.0.8-1+b1) ... Selecting previously unselected package groff-base. Preparing to unpack .../06-groff-base_1.23.0-4_arm64.deb ... Unpacking groff-base (1.23.0-4) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../07-bsdextrautils_2.40-8_arm64.deb ... Unpacking bsdextrautils (2.40-8) ... Selecting previously unselected package libpipeline1:arm64. Preparing to unpack .../08-libpipeline1_1.5.7-2_arm64.deb ... Unpacking libpipeline1:arm64 (1.5.7-2) ... Selecting previously unselected package man-db. Preparing to unpack .../09-man-db_2.12.1-1_arm64.deb ... Unpacking man-db (2.12.1-1) ... Selecting previously unselected package m4. Preparing to unpack .../10-m4_1.4.19-4_arm64.deb ... Unpacking m4 (1.4.19-4) ... Selecting previously unselected package autoconf. Preparing to unpack .../11-autoconf_2.71-3_all.deb ... Unpacking autoconf (2.71-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../12-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../13-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../14-autopoint_0.21-14_all.deb ... Unpacking autopoint (0.21-14) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../15-libdebhelper-perl_13.15.3_all.deb ... Unpacking libdebhelper-perl (13.15.3) ... Selecting previously unselected package libtool. Preparing to unpack .../16-libtool_2.4.7-7_all.deb ... Unpacking libtool (2.4.7-7) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../17-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../18-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libsub-override-perl. Preparing to unpack .../19-libsub-override-perl_0.10-1_all.deb ... Unpacking libsub-override-perl (0.10-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../20-libfile-stripnondeterminism-perl_1.13.1-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.13.1-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../21-dh-strip-nondeterminism_1.13.1-1_all.deb ... Unpacking dh-strip-nondeterminism (1.13.1-1) ... Selecting previously unselected package libelf1t64:arm64. Preparing to unpack .../22-libelf1t64_0.191-1+b1_arm64.deb ... Unpacking libelf1t64:arm64 (0.191-1+b1) ... Selecting previously unselected package dwz. Preparing to unpack .../23-dwz_0.15-1+b1_arm64.deb ... Unpacking dwz (0.15-1+b1) ... Selecting previously unselected package libicu72:arm64. Preparing to unpack .../24-libicu72_72.1-4+b1_arm64.deb ... Unpacking libicu72:arm64 (72.1-4+b1) ... Selecting previously unselected package libxml2:arm64. Preparing to unpack .../25-libxml2_2.9.14+dfsg-1.3+b3_arm64.deb ... Unpacking libxml2:arm64 (2.9.14+dfsg-1.3+b3) ... Selecting previously unselected package gettext. Preparing to unpack .../26-gettext_0.21-14+b1_arm64.deb ... Unpacking gettext (0.21-14+b1) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../27-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../28-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../29-debhelper_13.15.3_all.deb ... Unpacking debhelper (13.15.3) ... Selecting previously unselected package libpcre2-16-0:arm64. Preparing to unpack .../30-libpcre2-16-0_10.42-4+b1_arm64.deb ... Unpacking libpcre2-16-0:arm64 (10.42-4+b1) ... Selecting previously unselected package libpcre2-32-0:arm64. Preparing to unpack .../31-libpcre2-32-0_10.42-4+b1_arm64.deb ... Unpacking libpcre2-32-0:arm64 (10.42-4+b1) ... Selecting previously unselected package libpcre2-posix3:arm64. Preparing to unpack .../32-libpcre2-posix3_10.42-4+b1_arm64.deb ... Unpacking libpcre2-posix3:arm64 (10.42-4+b1) ... Selecting previously unselected package libpcre2-dev:arm64. Preparing to unpack .../33-libpcre2-dev_10.42-4+b1_arm64.deb ... Unpacking libpcre2-dev:arm64 (10.42-4+b1) ... Selecting previously unselected package zlib1g-dev:arm64. Preparing to unpack .../34-zlib1g-dev_1%3a1.3.dfsg-3.1_arm64.deb ... Unpacking zlib1g-dev:arm64 (1:1.3.dfsg-3.1) ... Setting up libpipeline1:arm64 (1.5.7-2) ... Setting up libicu72:arm64 (72.1-4+b1) ... Setting up bsdextrautils (2.40-8) ... Setting up libmagic-mgc (1:5.45-3) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.15.3) ... Setting up libmagic1t64:arm64 (1:5.45-3) ... Setting up gettext-base (0.21-14+b1) ... Setting up m4 (1.4.19-4) ... Setting up file (1:5.45-3) ... Setting up libpcre2-16-0:arm64 (10.42-4+b1) ... Setting up libelf1t64:arm64 (0.191-1+b1) ... Setting up autotools-dev (20220109.1) ... Setting up libpcre2-32-0:arm64 (10.42-4+b1) ... Setting up autopoint (0.21-14) ... Setting up autoconf (2.71-3) ... Setting up zlib1g-dev:arm64 (1:1.3.dfsg-3.1) ... Setting up libpcre2-posix3:arm64 (10.42-4+b1) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.22) ... Setting up libuchardet0:arm64 (0.0.8-1+b1) ... Setting up libsub-override-perl (0.10-1) ... Setting up libxml2:arm64 (2.9.14+dfsg-1.3+b3) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.13.1-1) ... Setting up gettext (0.21-14+b1) ... Setting up libpcre2-dev:arm64 (10.42-4+b1) ... Setting up libtool (2.4.7-7) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up dh-strip-nondeterminism (1.13.1-1) ... Setting up groff-base (1.23.0-4) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.12.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up debhelper (13.15.3) ... Processing triggers for libc-bin (2.38-7) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/pullseq-1.0.2/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../pullseq_1.0.2-5_source.changes dpkg-buildpackage: info: source package pullseq dpkg-buildpackage: info: source version 1.0.2-5 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Nilesh Patra dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 debian/rules clean dh clean dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf configure.ac:12: installing './compile' configure.ac:48: installing './config.guess' configure.ac:48: installing './config.sub' configure.ac:7: installing './install-sh' configure.ac:7: installing './missing' src/Makefile.am: installing './depcomp' dh_auto_configure ./configure --build=aarch64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/aarch64-linux-gnu --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a race-free mkdir -p... /usr/bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether gcc accepts -g... yes checking for gcc option to enable C11 features... none needed checking whether gcc understands -c and -o together... yes checking whether make supports the include directive... yes (GNU style) checking dependency style of gcc... none checking for gzopen in -lz... yes checking for pcre2_config_8 in -lpcre2-8... yes checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for pcre2.h... no checking for inttypes.h... (cached) yes checking for limits.h... yes checking for stddef.h... yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for inline... inline checking for size_t... yes checking for ssize_t... yes checking for uint16_t... yes checking for uint32_t... yes checking for uint8_t... yes checking for ptrdiff_t... yes checking build system type... aarch64-unknown-linux-gnu checking host system type... aarch64-unknown-linux-gnu checking for GNU libc compatible malloc... yes checking for GNU libc compatible realloc... yes checking for strlen... yes checking for memset... yes checking for strchr... yes checking for strerror... yes checking for strtol... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating src/Makefile config.status: creating src/config.h config.status: executing depfiles commands dh_auto_build make -j12 make[1]: Entering directory '/build/reproducible-path/pullseq-1.0.2' Making all in src make[2]: Entering directory '/build/reproducible-path/pullseq-1.0.2/src' make all-am make[3]: Entering directory '/build/reproducible-path/pullseq-1.0.2/src' gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pullseq-1.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fcommon -c -o hash.o hash.c gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pullseq-1.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fcommon -c -o output.o output.c gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pullseq-1.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fcommon -c -o size_filter.o size_filter.c gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pullseq-1.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fcommon -c -o search_header.o search_header.c gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pullseq-1.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fcommon -c -o file_read.o file_read.c gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pullseq-1.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fcommon -c -o pull_by_re.o pull_by_re.c gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pullseq-1.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fcommon -c -o pull_by_name.o pull_by_name.c gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pullseq-1.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fcommon -c -o pull_by_size.o pull_by_size.c gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pullseq-1.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fcommon -c -o pullseq.o pullseq.c gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pullseq-1.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fcommon -c -o cmpseq.o cmpseq.c gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pullseq-1.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fcommon -c -o seqdiff.o seqdiff.c gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pullseq-1.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fcommon -c -o seqdiff_results.o seqdiff_results.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pullseq-1.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fcommon -Wl,-z,relro -Wl,-z,now -lpcre2-8 -o pullseq hash.o output.o size_filter.o search_header.o file_read.o pull_by_re.o pull_by_name.o pull_by_size.o pullseq.o -lpcre2-8 -lz gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pullseq-1.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -fcommon -Wl,-z,relro -Wl,-z,now -lpcre2-8 -o seqdiff cmpseq.o file_read.o hash.o seqdiff.o seqdiff_results.o output.o -lpcre2-8 -lz make[3]: Leaving directory '/build/reproducible-path/pullseq-1.0.2/src' make[2]: Leaving directory '/build/reproducible-path/pullseq-1.0.2/src' make[2]: Entering directory '/build/reproducible-path/pullseq-1.0.2' make[2]: Nothing to be done for 'all-am'. make[2]: Leaving directory '/build/reproducible-path/pullseq-1.0.2' make[1]: Leaving directory '/build/reproducible-path/pullseq-1.0.2' dh_auto_test make -j12 check "TESTSUITEFLAGS=-j12 --verbose" VERBOSE=1 make[1]: Entering directory '/build/reproducible-path/pullseq-1.0.2' Making check in src make[2]: Entering directory '/build/reproducible-path/pullseq-1.0.2/src' make[2]: Leaving directory '/build/reproducible-path/pullseq-1.0.2/src' make[2]: Entering directory '/build/reproducible-path/pullseq-1.0.2' make[2]: Nothing to be done for 'check-am'. make[2]: Leaving directory '/build/reproducible-path/pullseq-1.0.2' make[1]: Leaving directory '/build/reproducible-path/pullseq-1.0.2' create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install --destdir=debian/pullseq/ make -j12 install DESTDIR=/build/reproducible-path/pullseq-1.0.2/debian/pullseq AM_UPDATE_INFO_DIR=no make[1]: Entering directory '/build/reproducible-path/pullseq-1.0.2' Making install in src make[2]: Entering directory '/build/reproducible-path/pullseq-1.0.2/src' make[3]: Entering directory '/build/reproducible-path/pullseq-1.0.2/src' /usr/bin/mkdir -p '/build/reproducible-path/pullseq-1.0.2/debian/pullseq/usr/bin' make[3]: Nothing to be done for 'install-data-am'. /usr/bin/install -c pullseq seqdiff '/build/reproducible-path/pullseq-1.0.2/debian/pullseq/usr/bin' make[3]: Leaving directory '/build/reproducible-path/pullseq-1.0.2/src' make[2]: Leaving directory '/build/reproducible-path/pullseq-1.0.2/src' make[2]: Entering directory '/build/reproducible-path/pullseq-1.0.2' make[3]: Entering directory '/build/reproducible-path/pullseq-1.0.2' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/build/reproducible-path/pullseq-1.0.2' make[2]: Leaving directory '/build/reproducible-path/pullseq-1.0.2' make[1]: Leaving directory '/build/reproducible-path/pullseq-1.0.2' dh_installdocs dh_installchangelogs dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'pullseq-dbgsym' in '../pullseq-dbgsym_1.0.2-5_arm64.deb'. dpkg-deb: building package 'pullseq' in '../pullseq_1.0.2-5_arm64.deb'. dpkg-genbuildinfo --build=binary -O../pullseq_1.0.2-5_arm64.buildinfo dpkg-genchanges --build=binary -O../pullseq_1.0.2-5_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/1097729 and its subdirectories I: Current time: Tue May 7 21:11:28 -12 2024 I: pbuilder-time-stamp: 1715159488 Wed May 8 09:11:30 UTC 2024 I: 1st build successful. Starting 2nd build on remote node codethink03-arm64.debian.net. Wed May 8 09:11:30 UTC 2024 I: Preparing to do remote build '2' on codethink03-arm64.debian.net. Wed May 8 09:12:05 UTC 2024 I: Deleting $TMPDIR on codethink03-arm64.debian.net. Wed May 8 09:12:06 UTC 2024 I: pullseq_1.0.2-5_arm64.changes: Format: 1.8 Date: Fri, 15 Mar 2024 02:45:24 +0530 Source: pullseq Binary: pullseq pullseq-dbgsym Architecture: arm64 Version: 1.0.2-5 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Nilesh Patra Description: pullseq - Extract sequence from a fasta or fastq Closes: 1066472 Changes: pullseq (1.0.2-5) unstable; urgency=medium . * Fixup implicit declaration of function (Closes: #1066472) Checksums-Sha1: 9082fb7c8e09ee3be65c55e722d636bbbaf45b7d 52576 pullseq-dbgsym_1.0.2-5_arm64.deb 6ba800c11ba5ddcc95ecacdbabb513397efd417f 5230 pullseq_1.0.2-5_arm64.buildinfo 8d4cf895f29cf6a7acbd5f6420877ebba1fd05a5 20368 pullseq_1.0.2-5_arm64.deb Checksums-Sha256: 2859949cb96a9bc93bac0dbcee7675ab686d7c80c163cc43813c63c466d3bd10 52576 pullseq-dbgsym_1.0.2-5_arm64.deb 404d742d128d8818d9f8309b0d0d8c8c2d1170d61c45f03c33e2a799d78f0688 5230 pullseq_1.0.2-5_arm64.buildinfo 5426febf3f665a616c26398608d0a445d5f0662118bf687687682d9e35d29799 20368 pullseq_1.0.2-5_arm64.deb Files: 4849e65f1816e9b83e9c2612f0020211 52576 debug optional pullseq-dbgsym_1.0.2-5_arm64.deb 2abc34bf3ed4073813ff89bff691bea0 5230 science optional pullseq_1.0.2-5_arm64.buildinfo e6702f0483908f41b3853f6d689d1ed4 20368 science optional pullseq_1.0.2-5_arm64.deb Wed May 8 09:12:07 UTC 2024 I: diffoscope 265 will be used to compare the two builds: Running as unit: rb-diffoscope-arm64_24-34131.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.XvRRj6cf/pullseq_1.0.2-5.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.XvRRj6cf/pullseq_1.0.2-5.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.XvRRj6cf/pullseq_1.0.2-5.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.XvRRj6cf/b1/pullseq_1.0.2-5_arm64.changes /srv/reproducible-results/rbuild-debian/r-b-build.XvRRj6cf/b2/pullseq_1.0.2-5_arm64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.365s) 0.365s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.015s) 0.015s 12 calls diffoscope.comparators.binary.FilesystemFile ## specialize (total time: 0.000s) 0.000s 1 call specialize Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 708ms CPU time consumed: 708ms Wed May 8 09:12:08 UTC 2024 I: diffoscope 265 found no differences in the changes files, and a .buildinfo file also exists. Wed May 8 09:12:08 UTC 2024 I: pullseq from trixie built successfully and reproducibly on arm64. Wed May 8 09:12:09 UTC 2024 I: Submitting .buildinfo files to external archives: Wed May 8 09:12:09 UTC 2024 I: Submitting 8.0K b1/pullseq_1.0.2-5_arm64.buildinfo.asc Wed May 8 09:12:11 UTC 2024 I: Submitting 8.0K b2/pullseq_1.0.2-5_arm64.buildinfo.asc Wed May 8 09:12:12 UTC 2024 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Wed May 8 09:12:12 UTC 2024 I: Done submitting .buildinfo files. Wed May 8 09:12:12 UTC 2024 I: Removing signed pullseq_1.0.2-5_arm64.buildinfo.asc files: removed './b1/pullseq_1.0.2-5_arm64.buildinfo.asc' removed './b2/pullseq_1.0.2-5_arm64.buildinfo.asc'