Wed May 1 19:10:33 UTC 2024 I: starting to build macs/trixie/arm64 on jenkins on '2024-05-01 19:10' Wed May 1 19:10:33 UTC 2024 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/arm64_23/39351/console.log Wed May 1 19:10:33 UTC 2024 I: Downloading source for trixie/macs=3.0.1-2 --2024-05-01 19:10:34-- http://deb.debian.org/debian/pool/main/m/macs/macs_3.0.1-2.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2152 (2.1K) [text/prs.lines.tag] Saving to: ‘macs_3.0.1-2.dsc’ 0K .. 100% 275M=0s 2024-05-01 19:10:34 (275 MB/s) - ‘macs_3.0.1-2.dsc’ saved [2152/2152] Wed May 1 19:10:34 UTC 2024 I: macs_3.0.1-2.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: macs Binary: macs Architecture: any Version: 3.0.1-2 Maintainer: Debian Med Packaging Team Uploaders: Michael R. Crusoe , Andreas Tille Homepage: https://github.com/taoliu/MACS/ Standards-Version: 4.6.2 Vcs-Browser: https://salsa.debian.org/med-team/macs Vcs-Git: https://salsa.debian.org/med-team/macs.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13), dh-sequence-python3, pybuild-plugin-pyproject, python3-all-dev, python3-numpy, python3-setuptools, python3-pip, python3-pytest, python3-cykhash, python3-hmmlearn, libsimde-dev, cython3, help2man, procps, bc Package-List: macs deb science optional arch=any Checksums-Sha1: 6aa3b6265224a0ff4ab0087f338620755ed4af24 197400439 macs_3.0.1.orig.tar.gz fb317ff34ff1ab5ab052ccf920400ddab3029ea1 1269452 macs_3.0.1-2.debian.tar.xz Checksums-Sha256: 8a2f5b2dccfc255ea2fd5e54e0d6aa9c12f5ce83762b17b779ce2546ade860ce 197400439 macs_3.0.1.orig.tar.gz 574073485deb40060e1daead6c9fc50853fdd4e380e59e7df2836a138a4afba5 1269452 macs_3.0.1-2.debian.tar.xz Files: 24d97ffa5f603717fcb14c2b0a4c1ecf 197400439 macs_3.0.1.orig.tar.gz 24102bb05c92072c5b290a869f2137cf 1269452 macs_3.0.1-2.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQIzBAEBCgAdFiEEck1gkzcRPHEFUNdHPCZ2P2xn5uIFAmXfHEcACgkQPCZ2P2xn 5uJ9Fg/9HE1EdK9g6OIyZGVUBmfwZEe6iVToMcg1ahKp+FEujvFc3UG72jNN+X9T vwu7BIoiRCLyNGvDMDjVUuimH+al4ghcXlWYKWWpixQ1aiNAAafr6JkhPynyj0bO x7fIXQEuHJICrEUFO3k0fPj5YJjUsG2xU/9nTZDsQ0vcO6Jxy1j5mF4mYp62GcQ4 mmF0whiApATlSaQPdA3nTPUo99HmlsSLGW9NSGgeJv2PDlfJPujr8Am5MC/p+OfD FeFL9VDg/tSYHRM2EGIthaVtMeFrmw/WRrDhLfYdS8Q7YmagP8rPXvqms/Gd/ZSh ec+LsuSqYJQQGDNW1Ve1gxjmsaXc4sRS/QdAik5WFn/iCzpH+mIGh+/xjnUP+hSl /4yb7n018/h5WHGozX8r6zTJ9Z458bhoZgAxZXyQiG7L4U7Ku1GBL5wBHcf/Z96w yMJZMBvxHA5zrbyBmKN2O7DGyWz7yclTvxnPJ3AU96nx2Y9z8ztRqQnlehbGf8Yq XBCvX2G3doA/7hF6D7wwEVXW84CwYQKPd9u6IsAo5TvKpzzjBl8cXO50xrpjI3Vs edh57uRU5RjzbmoYvGrelE1gs9uNCii+3f8uGUzD6qbsDCBR2t56G24Z8BSPz+K0 XYrCJV7zZCi5DiFeNqevrolXs1Jh4sLQiPXAhfSCi2Z6oPSEQwQ= =dUdP -----END PGP SIGNATURE----- Wed May 1 19:10:34 UTC 2024 I: Checking whether the package is not for us Wed May 1 19:10:34 UTC 2024 I: Starting 1st build on remote node codethink03-arm64.debian.net. Wed May 1 19:10:34 UTC 2024 I: Preparing to do remote build '1' on codethink03-arm64.debian.net. Wed May 1 19:28:46 UTC 2024 I: Deleting $TMPDIR on codethink03-arm64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Tue Jun 3 13:33:41 -12 2025 I: pbuilder-time-stamp: 1749000821 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [macs_3.0.1-2.dsc] I: copying [./macs_3.0.1.orig.tar.gz] I: copying [./macs_3.0.1-2.debian.tar.xz] I: Extracting source gpgv: Signature made Wed Feb 28 11:43:03 2024 gpgv: using RSA key 724D609337113C710550D7473C26763F6C67E6E2 gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./macs_3.0.1-2.dsc: no acceptable signature found dpkg-source: info: extracting macs in macs-3.0.1 dpkg-source: info: unpacking macs_3.0.1.orig.tar.gz dpkg-source: info: unpacking macs_3.0.1-2.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying spelling dpkg-source: info: applying invalid_escape_sequence dpkg-source: info: applying adapt_to_prelease_hmmlearn.patch dpkg-source: info: applying python3 dpkg-source: info: applying keep_debug dpkg-source: info: applying simde.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/983179/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='arm64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' DISTRIBUTION='trixie' HOME='/root' HOST_ARCH='arm64' IFS=' ' INVOCATION_ID='3d4d2ac1a2bf4e19a50c92039ece556e' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='983179' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.a07ZJ1mi/pbuilderrc_TVFS --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.a07ZJ1mi/b1 --logfile b1/build.log macs_3.0.1-2.dsc' SUDO_GID='109' SUDO_UID='104' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://192.168.101.4:3128' I: uname -a Linux codethink03-arm64 6.1.0-20-cloud-arm64 #1 SMP Debian 6.1.85-1 (2024-04-11) aarch64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 May 24 13:38 /bin -> usr/bin I: user script /srv/workspace/pbuilder/983179/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: arm64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-sequence-python3, pybuild-plugin-pyproject, python3-all-dev, python3-numpy, python3-setuptools, python3-pip, python3-pytest, python3-cykhash, python3-hmmlearn, libsimde-dev, cython3, help2man, procps, bc dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19941 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-sequence-python3; however: Package dh-sequence-python3 is not installed. pbuilder-satisfydepends-dummy depends on pybuild-plugin-pyproject; however: Package pybuild-plugin-pyproject is not installed. pbuilder-satisfydepends-dummy depends on python3-all-dev; however: Package python3-all-dev is not installed. pbuilder-satisfydepends-dummy depends on python3-numpy; however: Package python3-numpy is not installed. pbuilder-satisfydepends-dummy depends on python3-setuptools; however: Package python3-setuptools is not installed. pbuilder-satisfydepends-dummy depends on python3-pip; however: Package python3-pip is not installed. pbuilder-satisfydepends-dummy depends on python3-pytest; however: Package python3-pytest is not installed. pbuilder-satisfydepends-dummy depends on python3-cykhash; however: Package python3-cykhash is not installed. pbuilder-satisfydepends-dummy depends on python3-hmmlearn; however: Package python3-hmmlearn is not installed. pbuilder-satisfydepends-dummy depends on libsimde-dev; however: Package libsimde-dev is not installed. pbuilder-satisfydepends-dummy depends on cython3; however: Package cython3 is not installed. pbuilder-satisfydepends-dummy depends on help2man; however: Package help2man is not installed. pbuilder-satisfydepends-dummy depends on procps; however: Package procps is not installed. pbuilder-satisfydepends-dummy depends on bc; however: Package bc is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bc{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} help2man{a} intltool-debian{a} libarchive-zip-perl{a} libdebhelper-perl{a} libelf1t64{a} libfile-stripnondeterminism-perl{a} libicu72{a} liblocale-gettext-perl{a} libmagic-mgc{a} libmagic1t64{a} libpipeline1{a} libproc2-0{a} libreadline8t64{a} libsimde-dev{a} libsub-override-perl{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} po-debconf{a} procps{a} readline-common{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx psmisc wget 0 packages upgraded, 38 newly installed, 0 to remove and 0 not upgraded. Need to get 20.6 MB of archives. After unpacking 89.2 MB will be used. The following packages have unmet dependencies: pbuilder-satisfydepends-dummy : Depends: dh-sequence-python3 which is a virtual package, provided by: - dh-python (6.20240422), but it is not installable Depends: pybuild-plugin-pyproject but it is not installable Depends: python3-all-dev but it is not installable Depends: python3-numpy but it is not installable Depends: python3-setuptools but it is not installable Depends: python3-pip but it is not installable Depends: python3-pytest but it is not installable Depends: python3-cykhash but it is not installable Depends: python3-hmmlearn but it is not installable Depends: cython3 but it is not installable The following actions will resolve these dependencies: Remove the following packages: 1) libdb5.3 [5.3.28+dfsg2-4+b1 (now)] 2) libssl3 [3.1.5-1 (now)] Install the following packages: 3) ca-certificates [20240203 (testing)] 4) cython3 [3.0.10+dfsg-5 (testing)] 5) dh-python [6.20240422 (testing)] 6) libblis4-serial [0.9.0-1+b2 (testing)] 7) libdb5.3t64 [5.3.28+dfsg2-7 (testing)] 8) libexpat1 [2.6.2-1 (testing)] 9) libexpat1-dev [2.6.2-1 (testing)] 10) libgfortran5 [14-20240330-1 (testing)] 11) libjs-jquery [3.6.1+dfsg+~3.5.14-1 (testing)] 12) libjs-sphinxdoc [7.2.6-6 (testing)] 13) libjs-underscore [1.13.4~dfsg+~1.11.4-3 (testing)] 14) liblapack3 [3.12.0-3 (testing)] 15) liblbfgsb0 [3.0+dfsg.4-1+b1 (testing)] 16) libpython3-all-dev [3.11.8-1 (testing)] 17) libpython3-dev [3.11.8-1 (testing)] 18) libpython3-stdlib [3.11.8-1 (testing)] 19) libpython3.11-dev [3.11.9-1 (testing)] 20) libpython3.11-minimal [3.11.9-1 (testing)] 21) libpython3.11-stdlib [3.11.9-1 (testing)] 22) libpython3.11t64 [3.11.9-1 (testing)] 23) libpython3.12-dev [3.12.3-1 (testing)] 24) libpython3.12-minimal [3.12.3-1 (testing)] 25) libpython3.12-stdlib [3.12.3-1 (testing)] 26) libpython3.12t64 [3.12.3-1 (testing)] 27) libssl3t64 [3.2.1-3 (testing)] 28) media-types [10.1.0 (testing)] 29) netbase [6.4 (testing)] 30) openssl [3.2.1-3 (testing)] 31) pybuild-plugin-pyproject [6.20240422 (testing)] 32) python3 [3.11.8-1 (testing)] 33) python3-all [3.11.8-1 (testing)] 34) python3-all-dev [3.11.8-1 (testing)] 35) python3-build [1.1.1-1 (testing)] 36) python3-cykhash [2.0.0-3 (testing)] 37) python3-decorator [5.1.1-5 (testing)] 38) python3-dev [3.11.8-1 (testing)] 39) python3-distutils [3.12.3-1 (testing)] 40) python3-hmmlearn [0.3.0-5 (testing)] 41) python3-iniconfig [1.1.1-2 (testing)] 42) python3-installer [0.7.0+dfsg1-3 (testing)] 43) python3-joblib [1.3.2-2 (testing)] 44) python3-lib2to3 [3.12.3-1 (testing)] 45) python3-minimal [3.11.8-1 (testing)] 46) python3-numpy [1:1.24.2-2 (testing)] 47) python3-packaging [24.0-1 (testing)] 48) python3-pip [24.0+dfsg-2 (testing)] 49) python3-pkg-resources [68.1.2-2 (testing)] 50) python3-pluggy [1.5.0-1 (testing)] 51) python3-pyproject-hooks [1.0.0-2 (testing)] 52) python3-pytest [7.4.4-3 (testing)] 53) python3-scipy [1.11.4-6 (testing)] 54) python3-setuptools [68.1.2-2 (testing)] 55) python3-sklearn [1.4.1.post1+dfsg-1 (testing)] 56) python3-sklearn-lib [1.4.1.post1+dfsg-1 (testing)] 57) python3-threadpoolctl [3.1.0-1 (testing)] 58) python3-toml [0.10.2-1 (testing)] 59) python3-wheel [0.43.0-1 (testing)] 60) python3.11 [3.11.9-1 (testing)] 61) python3.11-dev [3.11.9-1 (testing)] 62) python3.11-minimal [3.11.9-1 (testing)] 63) python3.12 [3.12.3-1 (testing)] 64) python3.12-dev [3.12.3-1 (testing)] 65) python3.12-minimal [3.12.3-1 (testing)] 66) tzdata [2024a-3 (testing)] 67) zlib1g-dev [1:1.3.dfsg-3.1 (testing)] The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bc{a} bsdextrautils{a} ca-certificates{a} cython3{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} help2man{a} intltool-debian{a} libarchive-zip-perl{a} libblis4-serial{a} libdb5.3t64{a} libdebhelper-perl{a} libelf1t64{a} libexpat1{a} libexpat1-dev{a} libfile-stripnondeterminism-perl{a} libgfortran5{a} libicu72{a} libjs-jquery{a} libjs-sphinxdoc{a} libjs-underscore{a} liblapack3{a} liblbfgsb0{a} liblocale-gettext-perl{a} libmagic-mgc{a} libmagic1t64{a} libpipeline1{a} libproc2-0{a} libpython3-all-dev{a} libpython3-dev{a} libpython3-stdlib{a} libpython3.11-dev{a} libpython3.11-minimal{a} libpython3.11-stdlib{a} libpython3.11t64{a} libpython3.12-dev{a} libpython3.12-minimal{a} libpython3.12-stdlib{a} libpython3.12t64{a} libreadline8t64{a} libsimde-dev{a} libssl3t64{a} libsub-override-perl{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} media-types{a} netbase{a} openssl{a} po-debconf{a} procps{a} pybuild-plugin-pyproject{a} python3{a} python3-all{a} python3-all-dev{a} python3-build{a} python3-cykhash{a} python3-decorator{a} python3-dev{a} python3-distutils{a} python3-hmmlearn{a} python3-iniconfig{a} python3-installer{a} python3-joblib{a} python3-lib2to3{a} python3-minimal{a} python3-numpy{a} python3-packaging{a} python3-pip{a} python3-pkg-resources{a} python3-pluggy{a} python3-pyproject-hooks{a} python3-pytest{a} python3-scipy{a} python3-setuptools{a} python3-sklearn{a} python3-sklearn-lib{a} python3-threadpoolctl{a} python3-toml{a} python3-wheel{a} python3.11{a} python3.11-dev{a} python3.11-minimal{a} python3.12{a} python3.12-dev{a} python3.12-minimal{a} readline-common{a} sensible-utils{a} tzdata{a} zlib1g-dev{a} The following packages will be REMOVED: libdb5.3{a} libssl3{a} The following packages are RECOMMENDED but will NOT be installed: curl javascript-common libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx psmisc python3-matplotlib python3-pil python3-psutil python3-pygments python3-simplejson wget 0 packages upgraded, 103 newly installed, 2 to remove and 0 not upgraded. Need to get 91.1 MB of archives. After unpacking 448 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main arm64 libdb5.3t64 arm64 5.3.28+dfsg2-7 [625 kB] Get: 2 http://deb.debian.org/debian trixie/main arm64 libssl3t64 arm64 3.2.1-3 [2537 kB] Get: 3 http://deb.debian.org/debian trixie/main arm64 liblocale-gettext-perl arm64 1.07-6+b1 [15.0 kB] Get: 4 http://deb.debian.org/debian trixie/main arm64 libpython3.11-minimal arm64 3.11.9-1 [813 kB] Get: 5 http://deb.debian.org/debian trixie/main arm64 libexpat1 arm64 2.6.2-1 [88.7 kB] Get: 6 http://deb.debian.org/debian trixie/main arm64 python3.11-minimal arm64 3.11.9-1 [1767 kB] Get: 7 http://deb.debian.org/debian trixie/main arm64 python3-minimal arm64 3.11.8-1 [26.3 kB] Get: 8 http://deb.debian.org/debian trixie/main arm64 media-types all 10.1.0 [26.9 kB] Get: 9 http://deb.debian.org/debian trixie/main arm64 netbase all 6.4 [12.8 kB] Get: 10 http://deb.debian.org/debian trixie/main arm64 tzdata all 2024a-3 [255 kB] Get: 11 http://deb.debian.org/debian trixie/main arm64 readline-common all 8.2-4 [69.3 kB] Get: 12 http://deb.debian.org/debian trixie/main arm64 libreadline8t64 arm64 8.2-4 [157 kB] Get: 13 http://deb.debian.org/debian trixie/main arm64 libpython3.11-stdlib arm64 3.11.9-1 [1775 kB] Get: 14 http://deb.debian.org/debian trixie/main arm64 python3.11 arm64 3.11.9-1 [602 kB] Get: 15 http://deb.debian.org/debian trixie/main arm64 libpython3-stdlib arm64 3.11.8-1 [9332 B] Get: 16 http://deb.debian.org/debian trixie/main arm64 python3 arm64 3.11.8-1 [27.4 kB] Get: 17 http://deb.debian.org/debian trixie/main arm64 libpython3.12-minimal arm64 3.12.3-1 [802 kB] Get: 18 http://deb.debian.org/debian trixie/main arm64 python3.12-minimal arm64 3.12.3-1 [1931 kB] Get: 19 http://deb.debian.org/debian trixie/main arm64 libproc2-0 arm64 2:4.0.4-4 [61.7 kB] Get: 20 http://deb.debian.org/debian trixie/main arm64 procps arm64 2:4.0.4-4 [869 kB] Get: 21 http://deb.debian.org/debian trixie/main arm64 sensible-utils all 0.0.22 [22.4 kB] Get: 22 http://deb.debian.org/debian trixie/main arm64 openssl arm64 3.2.1-3 [1324 kB] Get: 23 http://deb.debian.org/debian trixie/main arm64 ca-certificates all 20240203 [158 kB] Get: 24 http://deb.debian.org/debian trixie/main arm64 libmagic-mgc arm64 1:5.45-3 [314 kB] Get: 25 http://deb.debian.org/debian trixie/main arm64 libmagic1t64 arm64 1:5.45-3 [100 kB] Get: 26 http://deb.debian.org/debian trixie/main arm64 file arm64 1:5.45-3 [43.0 kB] Get: 27 http://deb.debian.org/debian trixie/main arm64 gettext-base arm64 0.21-14+b1 [160 kB] Get: 28 http://deb.debian.org/debian trixie/main arm64 libuchardet0 arm64 0.0.8-1+b1 [69.0 kB] Get: 29 http://deb.debian.org/debian trixie/main arm64 groff-base arm64 1.23.0-3+b1 [1126 kB] Get: 30 http://deb.debian.org/debian trixie/main arm64 bsdextrautils arm64 2.39.3-6 [90.0 kB] Get: 31 http://deb.debian.org/debian trixie/main arm64 libpipeline1 arm64 1.5.7-2 [36.5 kB] Get: 32 http://deb.debian.org/debian trixie/main arm64 man-db arm64 2.12.0-3 [1385 kB] Get: 33 http://deb.debian.org/debian trixie/main arm64 m4 arm64 1.4.19-4 [277 kB] Get: 34 http://deb.debian.org/debian trixie/main arm64 autoconf all 2.71-3 [332 kB] Get: 35 http://deb.debian.org/debian trixie/main arm64 autotools-dev all 20220109.1 [51.6 kB] Get: 36 http://deb.debian.org/debian trixie/main arm64 automake all 1:1.16.5-1.3 [823 kB] Get: 37 http://deb.debian.org/debian trixie/main arm64 autopoint all 0.21-14 [496 kB] Get: 38 http://deb.debian.org/debian trixie/main arm64 bc arm64 1.07.1-3 [107 kB] Get: 39 http://deb.debian.org/debian trixie/main arm64 cython3 arm64 3.0.10+dfsg-5 [3120 kB] Get: 40 http://deb.debian.org/debian trixie/main arm64 libdebhelper-perl all 13.15.3 [88.0 kB] Get: 41 http://deb.debian.org/debian trixie/main arm64 libtool all 2.4.7-7 [517 kB] Get: 42 http://deb.debian.org/debian trixie/main arm64 dh-autoreconf all 20 [17.1 kB] Get: 43 http://deb.debian.org/debian trixie/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 44 http://deb.debian.org/debian trixie/main arm64 libsub-override-perl all 0.10-1 [10.6 kB] Get: 45 http://deb.debian.org/debian trixie/main arm64 libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get: 46 http://deb.debian.org/debian trixie/main arm64 dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get: 47 http://deb.debian.org/debian trixie/main arm64 libelf1t64 arm64 0.191-1+b1 [187 kB] Get: 48 http://deb.debian.org/debian trixie/main arm64 dwz arm64 0.15-1+b1 [102 kB] Get: 49 http://deb.debian.org/debian trixie/main arm64 libicu72 arm64 72.1-4+b1 [9224 kB] Get: 50 http://deb.debian.org/debian trixie/main arm64 libxml2 arm64 2.9.14+dfsg-1.3+b3 [624 kB] Get: 51 http://deb.debian.org/debian trixie/main arm64 gettext arm64 0.21-14+b1 [1249 kB] Get: 52 http://deb.debian.org/debian trixie/main arm64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 53 http://deb.debian.org/debian trixie/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 54 http://deb.debian.org/debian trixie/main arm64 debhelper all 13.15.3 [901 kB] Get: 55 http://deb.debian.org/debian trixie/main arm64 python3-pkg-resources all 68.1.2-2 [241 kB] Get: 56 http://deb.debian.org/debian trixie/main arm64 python3-lib2to3 all 3.12.3-1 [77.6 kB] Get: 57 http://deb.debian.org/debian trixie/main arm64 python3-distutils all 3.12.3-1 [131 kB] Get: 58 http://deb.debian.org/debian trixie/main arm64 python3-setuptools all 68.1.2-2 [468 kB] Get: 59 http://deb.debian.org/debian trixie/main arm64 dh-python all 6.20240422 [107 kB] Get: 60 http://deb.debian.org/debian trixie/main arm64 help2man arm64 1.49.3 [198 kB] Get: 61 http://deb.debian.org/debian trixie/main arm64 libblis4-serial arm64 0.9.0-1+b2 [791 kB] Get: 62 http://deb.debian.org/debian trixie/main arm64 libexpat1-dev arm64 2.6.2-1 [278 kB] Get: 63 http://deb.debian.org/debian trixie/main arm64 libgfortran5 arm64 14-20240330-1 [361 kB] Get: 64 http://deb.debian.org/debian trixie/main arm64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB] Get: 65 http://deb.debian.org/debian trixie/main arm64 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [116 kB] Get: 66 http://deb.debian.org/debian trixie/main arm64 libjs-sphinxdoc all 7.2.6-6 [150 kB] Get: 67 http://deb.debian.org/debian trixie/main arm64 liblapack3 arm64 3.12.0-3 [1757 kB] Get: 68 http://deb.debian.org/debian trixie/main arm64 liblbfgsb0 arm64 3.0+dfsg.4-1+b1 [25.0 kB] Get: 69 http://deb.debian.org/debian trixie/main arm64 libpython3.11t64 arm64 3.11.9-1 [1814 kB] Get: 70 http://deb.debian.org/debian trixie/main arm64 zlib1g-dev arm64 1:1.3.dfsg-3.1 [915 kB] Get: 71 http://deb.debian.org/debian trixie/main arm64 libpython3.11-dev arm64 3.11.9-1 [4358 kB] Get: 72 http://deb.debian.org/debian trixie/main arm64 libpython3-dev arm64 3.11.8-1 [9564 B] Get: 73 http://deb.debian.org/debian trixie/main arm64 libpython3.12-stdlib arm64 3.12.3-1 [1889 kB] Get: 74 http://deb.debian.org/debian trixie/main arm64 libpython3.12t64 arm64 3.12.3-1 [1948 kB] Get: 75 http://deb.debian.org/debian trixie/main arm64 libpython3.12-dev arm64 3.12.3-1 [4745 kB] Get: 76 http://deb.debian.org/debian trixie/main arm64 libpython3-all-dev arm64 3.11.8-1 [1072 B] Get: 77 http://deb.debian.org/debian trixie/main arm64 libsimde-dev all 0.8.0-1 [458 kB] Get: 78 http://deb.debian.org/debian trixie/main arm64 python3-packaging all 24.0-1 [45.5 kB] Get: 79 http://deb.debian.org/debian trixie/main arm64 python3-pyproject-hooks all 1.0.0-2 [10.6 kB] Get: 80 http://deb.debian.org/debian trixie/main arm64 python3-toml all 0.10.2-1 [16.2 kB] Get: 81 http://deb.debian.org/debian trixie/main arm64 python3-wheel all 0.43.0-1 [52.5 kB] Get: 82 http://deb.debian.org/debian trixie/main arm64 python3-build all 1.1.1-1 [32.5 kB] Get: 83 http://deb.debian.org/debian trixie/main arm64 python3-installer all 0.7.0+dfsg1-3 [18.6 kB] Get: 84 http://deb.debian.org/debian trixie/main arm64 pybuild-plugin-pyproject all 6.20240422 [11.1 kB] Get: 85 http://deb.debian.org/debian trixie/main arm64 python3.12 arm64 3.12.3-1 [659 kB] Get: 86 http://deb.debian.org/debian trixie/main arm64 python3-all arm64 3.11.8-1 [1056 B] Get: 87 http://deb.debian.org/debian trixie/main arm64 python3.11-dev arm64 3.11.9-1 [501 kB] Get: 88 http://deb.debian.org/debian trixie/main arm64 python3-dev arm64 3.11.8-1 [26.1 kB] Get: 89 http://deb.debian.org/debian trixie/main arm64 python3.12-dev arm64 3.12.3-1 [499 kB] Get: 90 http://deb.debian.org/debian trixie/main arm64 python3-all-dev arm64 3.11.8-1 [1072 B] Get: 91 http://deb.debian.org/debian trixie/main arm64 python3-cykhash arm64 2.0.0-3 [534 kB] Get: 92 http://deb.debian.org/debian trixie/main arm64 python3-decorator all 5.1.1-5 [15.1 kB] Get: 93 http://deb.debian.org/debian trixie/main arm64 python3-numpy arm64 1:1.24.2-2 [4122 kB] Get: 94 http://deb.debian.org/debian trixie/main arm64 python3-scipy arm64 1.11.4-6 [17.5 MB] Get: 95 http://deb.debian.org/debian trixie/main arm64 python3-joblib all 1.3.2-2 [218 kB] Get: 96 http://deb.debian.org/debian trixie/main arm64 python3-threadpoolctl all 3.1.0-1 [21.2 kB] Get: 97 http://deb.debian.org/debian trixie/main arm64 python3-sklearn-lib arm64 1.4.1.post1+dfsg-1 [5691 kB] Get: 98 http://deb.debian.org/debian trixie/main arm64 python3-sklearn all 1.4.1.post1+dfsg-1 [2246 kB] Get: 99 http://deb.debian.org/debian trixie/main arm64 python3-hmmlearn arm64 0.3.0-5 [129 kB] Get: 100 http://deb.debian.org/debian trixie/main arm64 python3-iniconfig all 1.1.1-2 [6396 B] Get: 101 http://deb.debian.org/debian trixie/main arm64 python3-pip all 24.0+dfsg-2 [1517 kB] Get: 102 http://deb.debian.org/debian trixie/main arm64 python3-pluggy all 1.5.0-1 [26.9 kB] Get: 103 http://deb.debian.org/debian trixie/main arm64 python3-pytest all 7.4.4-3 [239 kB] Fetched 91.1 MB in 1s (129 MB/s) debconf: delaying package configuration, since apt-utils is not installed dpkg: libdb5.3:arm64: dependency problems, but removing anyway as you requested: libperl5.38:arm64 depends on libdb5.3. libpam-modules:arm64 depends on libdb5.3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19941 files and directories currently installed.) Removing libdb5.3:arm64 (5.3.28+dfsg2-4+b1) ... Selecting previously unselected package libdb5.3t64:arm64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19934 files and directories currently installed.) Preparing to unpack .../libdb5.3t64_5.3.28+dfsg2-7_arm64.deb ... Unpacking libdb5.3t64:arm64 (5.3.28+dfsg2-7) ... Setting up libdb5.3t64:arm64 (5.3.28+dfsg2-7) ... dpkg: libssl3:arm64: dependency problems, but removing anyway as you requested: libkrb5-3:arm64 depends on libssl3 (>= 3.0.0). coreutils depends on libssl3 (>= 3.0.0). (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19940 files and directories currently installed.) Removing libssl3:arm64 (3.1.5-1) ... Selecting previously unselected package libssl3t64:arm64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19927 files and directories currently installed.) Preparing to unpack .../libssl3t64_3.2.1-3_arm64.deb ... Unpacking libssl3t64:arm64 (3.2.1-3) ... Setting up libssl3t64:arm64 (3.2.1-3) ... Selecting previously unselected package liblocale-gettext-perl. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19942 files and directories currently installed.) Preparing to unpack .../liblocale-gettext-perl_1.07-6+b1_arm64.deb ... Unpacking liblocale-gettext-perl (1.07-6+b1) ... Selecting previously unselected package libpython3.11-minimal:arm64. Preparing to unpack .../libpython3.11-minimal_3.11.9-1_arm64.deb ... Unpacking libpython3.11-minimal:arm64 (3.11.9-1) ... Selecting previously unselected package libexpat1:arm64. Preparing to unpack .../libexpat1_2.6.2-1_arm64.deb ... Unpacking libexpat1:arm64 (2.6.2-1) ... Selecting previously unselected package python3.11-minimal. Preparing to unpack .../python3.11-minimal_3.11.9-1_arm64.deb ... Unpacking python3.11-minimal (3.11.9-1) ... Setting up libpython3.11-minimal:arm64 (3.11.9-1) ... Setting up libexpat1:arm64 (2.6.2-1) ... Setting up python3.11-minimal (3.11.9-1) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20273 files and directories currently installed.) Preparing to unpack .../0-python3-minimal_3.11.8-1_arm64.deb ... Unpacking python3-minimal (3.11.8-1) ... Selecting previously unselected package media-types. Preparing to unpack .../1-media-types_10.1.0_all.deb ... Unpacking media-types (10.1.0) ... Selecting previously unselected package netbase. Preparing to unpack .../2-netbase_6.4_all.deb ... Unpacking netbase (6.4) ... Selecting previously unselected package tzdata. Preparing to unpack .../3-tzdata_2024a-3_all.deb ... Unpacking tzdata (2024a-3) ... Selecting previously unselected package readline-common. Preparing to unpack .../4-readline-common_8.2-4_all.deb ... Unpacking readline-common (8.2-4) ... Selecting previously unselected package libreadline8t64:arm64. Preparing to unpack .../5-libreadline8t64_8.2-4_arm64.deb ... Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8 to /lib/aarch64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8.2 to /lib/aarch64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8 to /lib/aarch64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8.2 to /lib/aarch64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:arm64 (8.2-4) ... Selecting previously unselected package libpython3.11-stdlib:arm64. Preparing to unpack .../6-libpython3.11-stdlib_3.11.9-1_arm64.deb ... Unpacking libpython3.11-stdlib:arm64 (3.11.9-1) ... Selecting previously unselected package python3.11. Preparing to unpack .../7-python3.11_3.11.9-1_arm64.deb ... Unpacking python3.11 (3.11.9-1) ... Selecting previously unselected package libpython3-stdlib:arm64. Preparing to unpack .../8-libpython3-stdlib_3.11.8-1_arm64.deb ... Unpacking libpython3-stdlib:arm64 (3.11.8-1) ... Setting up python3-minimal (3.11.8-1) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 21265 files and directories currently installed.) Preparing to unpack .../00-python3_3.11.8-1_arm64.deb ... Unpacking python3 (3.11.8-1) ... Selecting previously unselected package libpython3.12-minimal:arm64. Preparing to unpack .../01-libpython3.12-minimal_3.12.3-1_arm64.deb ... Unpacking libpython3.12-minimal:arm64 (3.12.3-1) ... Selecting previously unselected package python3.12-minimal. Preparing to unpack .../02-python3.12-minimal_3.12.3-1_arm64.deb ... Unpacking python3.12-minimal (3.12.3-1) ... Selecting previously unselected package libproc2-0:arm64. Preparing to unpack .../03-libproc2-0_2%3a4.0.4-4_arm64.deb ... Unpacking libproc2-0:arm64 (2:4.0.4-4) ... Selecting previously unselected package procps. Preparing to unpack .../04-procps_2%3a4.0.4-4_arm64.deb ... Unpacking procps (2:4.0.4-4) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../05-sensible-utils_0.0.22_all.deb ... Unpacking sensible-utils (0.0.22) ... Selecting previously unselected package openssl. Preparing to unpack .../06-openssl_3.2.1-3_arm64.deb ... Unpacking openssl (3.2.1-3) ... Selecting previously unselected package ca-certificates. Preparing to unpack .../07-ca-certificates_20240203_all.deb ... Unpacking ca-certificates (20240203) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../08-libmagic-mgc_1%3a5.45-3_arm64.deb ... Unpacking libmagic-mgc (1:5.45-3) ... Selecting previously unselected package libmagic1t64:arm64. Preparing to unpack .../09-libmagic1t64_1%3a5.45-3_arm64.deb ... Unpacking libmagic1t64:arm64 (1:5.45-3) ... Selecting previously unselected package file. Preparing to unpack .../10-file_1%3a5.45-3_arm64.deb ... Unpacking file (1:5.45-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../11-gettext-base_0.21-14+b1_arm64.deb ... Unpacking gettext-base (0.21-14+b1) ... Selecting previously unselected package libuchardet0:arm64. Preparing to unpack .../12-libuchardet0_0.0.8-1+b1_arm64.deb ... Unpacking libuchardet0:arm64 (0.0.8-1+b1) ... Selecting previously unselected package groff-base. Preparing to unpack .../13-groff-base_1.23.0-3+b1_arm64.deb ... Unpacking groff-base (1.23.0-3+b1) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../14-bsdextrautils_2.39.3-6_arm64.deb ... Unpacking bsdextrautils (2.39.3-6) ... Selecting previously unselected package libpipeline1:arm64. Preparing to unpack .../15-libpipeline1_1.5.7-2_arm64.deb ... Unpacking libpipeline1:arm64 (1.5.7-2) ... Selecting previously unselected package man-db. Preparing to unpack .../16-man-db_2.12.0-3_arm64.deb ... Unpacking man-db (2.12.0-3) ... Selecting previously unselected package m4. Preparing to unpack .../17-m4_1.4.19-4_arm64.deb ... Unpacking m4 (1.4.19-4) ... Selecting previously unselected package autoconf. Preparing to unpack .../18-autoconf_2.71-3_all.deb ... Unpacking autoconf (2.71-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../19-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../20-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../21-autopoint_0.21-14_all.deb ... Unpacking autopoint (0.21-14) ... Selecting previously unselected package bc. Preparing to unpack .../22-bc_1.07.1-3_arm64.deb ... Unpacking bc (1.07.1-3) ... Selecting previously unselected package cython3. Preparing to unpack .../23-cython3_3.0.10+dfsg-5_arm64.deb ... Unpacking cython3 (3.0.10+dfsg-5) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../24-libdebhelper-perl_13.15.3_all.deb ... Unpacking libdebhelper-perl (13.15.3) ... Selecting previously unselected package libtool. Preparing to unpack .../25-libtool_2.4.7-7_all.deb ... Unpacking libtool (2.4.7-7) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../26-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../27-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libsub-override-perl. Preparing to unpack .../28-libsub-override-perl_0.10-1_all.deb ... Unpacking libsub-override-perl (0.10-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../29-libfile-stripnondeterminism-perl_1.13.1-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.13.1-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../30-dh-strip-nondeterminism_1.13.1-1_all.deb ... Unpacking dh-strip-nondeterminism (1.13.1-1) ... Selecting previously unselected package libelf1t64:arm64. Preparing to unpack .../31-libelf1t64_0.191-1+b1_arm64.deb ... Unpacking libelf1t64:arm64 (0.191-1+b1) ... Selecting previously unselected package dwz. Preparing to unpack .../32-dwz_0.15-1+b1_arm64.deb ... Unpacking dwz (0.15-1+b1) ... Selecting previously unselected package libicu72:arm64. Preparing to unpack .../33-libicu72_72.1-4+b1_arm64.deb ... Unpacking libicu72:arm64 (72.1-4+b1) ... Selecting previously unselected package libxml2:arm64. Preparing to unpack .../34-libxml2_2.9.14+dfsg-1.3+b3_arm64.deb ... Unpacking libxml2:arm64 (2.9.14+dfsg-1.3+b3) ... Selecting previously unselected package gettext. Preparing to unpack .../35-gettext_0.21-14+b1_arm64.deb ... Unpacking gettext (0.21-14+b1) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../36-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../37-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. 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Selecting previously unselected package libsimde-dev. Preparing to unpack .../61-libsimde-dev_0.8.0-1_all.deb ... Unpacking libsimde-dev (0.8.0-1) ... Selecting previously unselected package python3-packaging. Preparing to unpack .../62-python3-packaging_24.0-1_all.deb ... Unpacking python3-packaging (24.0-1) ... Selecting previously unselected package python3-pyproject-hooks. Preparing to unpack .../63-python3-pyproject-hooks_1.0.0-2_all.deb ... Unpacking python3-pyproject-hooks (1.0.0-2) ... Selecting previously unselected package python3-toml. Preparing to unpack .../64-python3-toml_0.10.2-1_all.deb ... Unpacking python3-toml (0.10.2-1) ... Selecting previously unselected package python3-wheel. Preparing to unpack .../65-python3-wheel_0.43.0-1_all.deb ... Unpacking python3-wheel (0.43.0-1) ... Selecting previously unselected package python3-build. Preparing to unpack .../66-python3-build_1.1.1-1_all.deb ... Unpacking python3-build (1.1.1-1) ... 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Preparing to unpack .../84-python3-iniconfig_1.1.1-2_all.deb ... Unpacking python3-iniconfig (1.1.1-2) ... Selecting previously unselected package python3-pip. Preparing to unpack .../85-python3-pip_24.0+dfsg-2_all.deb ... Unpacking python3-pip (24.0+dfsg-2) ... Selecting previously unselected package python3-pluggy. Preparing to unpack .../86-python3-pluggy_1.5.0-1_all.deb ... Unpacking python3-pluggy (1.5.0-1) ... Selecting previously unselected package python3-pytest. Preparing to unpack .../87-python3-pytest_7.4.4-3_all.deb ... Unpacking python3-pytest (7.4.4-3) ... Setting up media-types (10.1.0) ... Setting up libpipeline1:arm64 (1.5.7-2) ... Setting up libsimde-dev (0.8.0-1) ... Setting up libicu72:arm64 (72.1-4+b1) ... Setting up bsdextrautils (2.39.3-6) ... Setting up libmagic-mgc (1:5.45-3) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.15.3) ... Setting up libmagic1t64:arm64 (1:5.45-3) ... Setting up libpython3.12-minimal:arm64 (3.12.3-1) ... Setting up gettext-base (0.21-14+b1) ... Setting up m4 (1.4.19-4) ... Setting up libblis4-serial:arm64 (0.9.0-1+b2) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/blis-serial/libblis.so.4 to provide /usr/lib/aarch64-linux-gnu/libblis.so.4 (libblis.so.4-aarch64-linux-gnu) in auto mode update-alternatives: using /usr/lib/aarch64-linux-gnu/blis-serial/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode Setting up file (1:5.45-3) ... Setting up libelf1t64:arm64 (0.191-1+b1) ... Setting up tzdata (2024a-3) ... Current default time zone: 'Etc/UTC' Local time is now: Wed Jun 4 01:34:32 UTC 2025. Universal Time is now: Wed Jun 4 01:34:32 UTC 2025. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up autotools-dev (20220109.1) ... Setting up libexpat1-dev:arm64 (2.6.2-1) ... Setting up libproc2-0:arm64 (2:4.0.4-4) ... Setting up autopoint (0.21-14) ... Setting up libgfortran5:arm64 (14-20240330-1) ... Setting up autoconf (2.71-3) ... Setting up zlib1g-dev:arm64 (1:1.3.dfsg-3.1) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.22) ... Setting up libuchardet0:arm64 (0.0.8-1+b1) ... Setting up procps (2:4.0.4-4) ... Setting up libsub-override-perl (0.10-1) ... Setting up netbase (6.4) ... Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... Setting up openssl (3.2.1-3) ... Setting up readline-common (8.2-4) ... Setting up libxml2:arm64 (2.9.14+dfsg-1.3+b3) ... Setting up liblocale-gettext-perl (1.07-6+b1) ... Setting up libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.13.1-1) ... Setting up python3.12-minimal (3.12.3-1) ... Setting up liblapack3:arm64 (3.12.0-3) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode Setting up gettext (0.21-14+b1) ... Setting up libtool (2.4.7-7) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up help2man (1.49.3) ... Setting up dh-autoreconf (20) ... Setting up ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 146 added, 0 removed; done. Setting up libjs-sphinxdoc (7.2.6-6) ... Setting up libreadline8t64:arm64 (8.2-4) ... Setting up dh-strip-nondeterminism (1.13.1-1) ... Setting up groff-base (1.23.0-3+b1) ... Setting up liblbfgsb0:arm64 (3.0+dfsg.4-1+b1) ... Setting up libpython3.12-stdlib:arm64 (3.12.3-1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libpython3.11-stdlib:arm64 (3.11.9-1) ... Setting up python3.12 (3.12.3-1) ... Setting up libpython3.11t64:arm64 (3.11.9-1) ... Setting up bc (1.07.1-3) ... Setting up man-db (2.12.0-3) ... Not building database; man-db/auto-update is not 'true'. Setting up libpython3.12t64:arm64 (3.12.3-1) ... Setting up libpython3.11-dev:arm64 (3.11.9-1) ... Setting up libpython3-stdlib:arm64 (3.11.8-1) ... Setting up python3.11 (3.11.9-1) ... Setting up libpython3-dev:arm64 (3.11.8-1) ... Setting up python3.11-dev (3.11.9-1) ... Setting up debhelper (13.15.3) ... Setting up python3 (3.11.8-1) ... Setting up libpython3.12-dev:arm64 (3.12.3-1) ... Setting up python3-wheel (0.43.0-1) ... Setting up python3-cykhash (2.0.0-3) ... Setting up python3-decorator (5.1.1-5) ... Setting up python3-packaging (24.0-1) ... Setting up python3-pyproject-hooks (1.0.0-2) ... Setting up libpython3-all-dev:arm64 (3.11.8-1) ... Setting up python3.12-dev (3.12.3-1) ... Setting up cython3 (3.0.10+dfsg-5) ... Setting up python3-pip (24.0+dfsg-2) ... Setting up python3-toml (0.10.2-1) ... Setting up python3-installer (0.7.0+dfsg1-3) ... Setting up python3-pluggy (1.5.0-1) ... Setting up python3-build (1.1.1-1) ... Setting up python3-lib2to3 (3.12.3-1) ... Setting up python3-pkg-resources (68.1.2-2) ... Setting up python3-distutils (3.12.3-1) ... python3.12: can't get files for byte-compilation Setting up python3-iniconfig (1.1.1-2) ... Setting up python3-setuptools (68.1.2-2) ... Setting up python3-joblib (1.3.2-2) ... Setting up python3-pytest (7.4.4-3) ... Setting up python3-threadpoolctl (3.1.0-1) ... Setting up python3-all (3.11.8-1) ... Setting up python3-dev (3.11.8-1) ... Setting up python3-numpy (1:1.24.2-2) ... Setting up dh-python (6.20240422) ... Setting up python3-all-dev (3.11.8-1) ... Setting up python3-scipy (1.11.4-6) ... Setting up pybuild-plugin-pyproject (6.20240422) ... Setting up python3-sklearn-lib:arm64 (1.4.1.post1+dfsg-1) ... Setting up python3-sklearn (1.4.1.post1+dfsg-1) ... Setting up python3-hmmlearn (0.3.0-5) ... Processing triggers for libc-bin (2.37-18) ... Processing triggers for ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/macs-3.0.1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../macs_3.0.1-2_source.changes dpkg-buildpackage: info: source package macs dpkg-buildpackage: info: source version 3.0.1-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Michael R. Crusoe dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 dpkg-source: info: using options from macs-3.0.1/debian/source/options: --extend-diff-ignore=(^|/)(.*\.c)$|.*[.]egg-info/ debian/rules clean dh clean --buildsystem=pybuild debian/rules override_dh_auto_clean make[1]: Entering directory '/build/reproducible-path/macs-3.0.1' rm -Rf test/macs3.0.1-2* test/speedtest* rm -f debian/*.1 debian/*-man-include make[1]: Leaving directory '/build/reproducible-path/macs-3.0.1' dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild debian/rules binary dh binary --buildsystem=pybuild dh_update_autotools_config -O--buildsystem=pybuild dh_autoreconf -O--buildsystem=pybuild dh_auto_configure -O--buildsystem=pybuild debian/rules override_dh_auto_build make[1]: Entering directory '/build/reproducible-path/macs-3.0.1' for pyx in $(find MACS3/ -name "*.pyx"); do \ rm -f ${pyx%%.pyx}.{h,c}; touch ${pyx}; done dh_auto_build I: pybuild plugin_pyproject:129: Building wheel for python3.12 with "build" module I: pybuild base:311: python3.12 -m build --skip-dependency-check --no-isolation --wheel --outdir /build/reproducible-path/macs-3.0.1/.pybuild/cpython3_3.12_MACS3 * Building wheel... Compiling MACS3/Signal/HMMR_EM.pyx because it changed. Compiling MACS3/Signal/HMMR_Signal_Processing.pyx because it changed. Compiling MACS3/Signal/HMMR_HMM.pyx because it changed. Compiling MACS3/Signal/Prob.pyx because it changed. Compiling MACS3/Signal/Region.pyx because it changed. Compiling MACS3/Signal/Pileup.pyx because it changed. Compiling MACS3/Signal/PileupV2.pyx because it changed. Compiling MACS3/Signal/PeakModel.pyx because it changed. Compiling MACS3/Signal/PeakDetect.pyx because it changed. Compiling MACS3/Signal/SignalProcessing.pyx because it changed. Compiling MACS3/Signal/FixWidthTrack.pyx because it changed. Compiling MACS3/Signal/PairedEndTrack.pyx because it changed. Compiling MACS3/Signal/BedGraph.pyx because it changed. Compiling MACS3/Signal/ScoreTrack.pyx because it changed. Compiling MACS3/Signal/CallPeakUnit.pyx because it changed. Compiling MACS3/Signal/VariantStat.pyx because it changed. Compiling MACS3/Signal/ReadAlignment.pyx because it changed. Compiling MACS3/Signal/RACollection.pyx because it changed. Compiling MACS3/Signal/UnitigRACollection.pyx because it changed. Compiling MACS3/Signal/PosReadsInfo.pyx because it changed. Compiling MACS3/Signal/PeakVariants.pyx because it changed. Compiling MACS3/IO/Parser.pyx because it changed. Compiling MACS3/IO/PeakIO.pyx because it changed. Compiling MACS3/IO/BedGraphIO.pyx because it changed. Compiling MACS3/IO/BAM.pyx because it changed. [ 1/25] Cythonizing MACS3/IO/BAM.pyx [ 2/25] Cythonizing MACS3/IO/BedGraphIO.pyx [ 3/25] Cythonizing MACS3/IO/Parser.pyx [ 4/25] Cythonizing MACS3/IO/PeakIO.pyx [ 5/25] Cythonizing MACS3/Signal/BedGraph.pyx [ 6/25] Cythonizing MACS3/Signal/CallPeakUnit.pyx [ 7/25] Cythonizing MACS3/Signal/FixWidthTrack.pyx [ 8/25] Cythonizing MACS3/Signal/HMMR_EM.pyx [ 9/25] Cythonizing MACS3/Signal/HMMR_HMM.pyx [10/25] Cythonizing MACS3/Signal/HMMR_Signal_Processing.pyx [11/25] Cythonizing MACS3/Signal/PairedEndTrack.pyx [12/25] Cythonizing MACS3/Signal/PeakDetect.pyx [13/25] Cythonizing MACS3/Signal/PeakModel.pyx [14/25] Cythonizing MACS3/Signal/PeakVariants.pyx [15/25] Cythonizing MACS3/Signal/Pileup.pyx [16/25] Cythonizing MACS3/Signal/PileupV2.pyx [17/25] Cythonizing MACS3/Signal/PosReadsInfo.pyx [18/25] Cythonizing MACS3/Signal/Prob.pyx [19/25] Cythonizing MACS3/Signal/RACollection.pyx [20/25] Cythonizing MACS3/Signal/ReadAlignment.pyx [21/25] Cythonizing MACS3/Signal/Region.pyx [22/25] Cythonizing MACS3/Signal/ScoreTrack.pyx [23/25] Cythonizing MACS3/Signal/SignalProcessing.pyx [24/25] Cythonizing MACS3/Signal/UnitigRACollection.pyx [25/25] Cythonizing MACS3/Signal/VariantStat.pyx running bdist_wheel running build running build_py creating build creating build/lib.linux-aarch64-cpython-312 creating build/lib.linux-aarch64-cpython-312/MACS3 copying MACS3/__init__.py -> build/lib.linux-aarch64-cpython-312/MACS3 creating build/lib.linux-aarch64-cpython-312/MACS3/IO copying MACS3/IO/__init__.py -> build/lib.linux-aarch64-cpython-312/MACS3/IO copying MACS3/IO/OutputWriter.py -> build/lib.linux-aarch64-cpython-312/MACS3/IO creating build/lib.linux-aarch64-cpython-312/MACS3/Signal copying MACS3/Signal/__init__.py -> build/lib.linux-aarch64-cpython-312/MACS3/Signal creating build/lib.linux-aarch64-cpython-312/MACS3/Commands copying MACS3/Commands/refinepeak_cmd.py -> build/lib.linux-aarch64-cpython-312/MACS3/Commands copying MACS3/Commands/randsample_cmd.py -> build/lib.linux-aarch64-cpython-312/MACS3/Commands copying MACS3/Commands/predictd_cmd.py -> build/lib.linux-aarch64-cpython-312/MACS3/Commands copying MACS3/Commands/pileup_cmd.py -> build/lib.linux-aarch64-cpython-312/MACS3/Commands copying MACS3/Commands/hmmratac_cmd.py -> build/lib.linux-aarch64-cpython-312/MACS3/Commands copying MACS3/Commands/filterdup_cmd.py -> build/lib.linux-aarch64-cpython-312/MACS3/Commands copying MACS3/Commands/diffpeak_cmd.py -> build/lib.linux-aarch64-cpython-312/MACS3/Commands copying MACS3/Commands/cmbreps_cmd.py -> build/lib.linux-aarch64-cpython-312/MACS3/Commands copying MACS3/Commands/callvar_cmd.py -> build/lib.linux-aarch64-cpython-312/MACS3/Commands copying MACS3/Commands/callpeak_cmd.py -> build/lib.linux-aarch64-cpython-312/MACS3/Commands copying MACS3/Commands/bdgpeakcall_cmd.py -> build/lib.linux-aarch64-cpython-312/MACS3/Commands copying MACS3/Commands/bdgopt_cmd.py -> build/lib.linux-aarch64-cpython-312/MACS3/Commands copying MACS3/Commands/bdgdiff_cmd.py -> build/lib.linux-aarch64-cpython-312/MACS3/Commands copying MACS3/Commands/bdgcmp_cmd.py -> build/lib.linux-aarch64-cpython-312/MACS3/Commands copying MACS3/Commands/bdgbroadcall_cmd.py -> build/lib.linux-aarch64-cpython-312/MACS3/Commands copying MACS3/Commands/__init__.py -> build/lib.linux-aarch64-cpython-312/MACS3/Commands creating build/lib.linux-aarch64-cpython-312/MACS3/Utilities copying MACS3/Utilities/__init__.py -> build/lib.linux-aarch64-cpython-312/MACS3/Utilities copying MACS3/Utilities/OptValidator.py -> build/lib.linux-aarch64-cpython-312/MACS3/Utilities copying MACS3/Utilities/Logger.py -> build/lib.linux-aarch64-cpython-312/MACS3/Utilities copying MACS3/Utilities/Constants.py -> build/lib.linux-aarch64-cpython-312/MACS3/Utilities running build_ext building 'MACS3.Signal.HMMR_EM' extension creating build/temp.linux-aarch64-cpython-312 creating build/temp.linux-aarch64-cpython-312/MACS3 creating build/temp.linux-aarch64-cpython-312/MACS3/Signal aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.12 -c MACS3/Signal/HMMR_EM.c -o build/temp.linux-aarch64-cpython-312/MACS3/Signal/HMMR_EM.o -w -Ofast aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/MACS3/Signal/HMMR_EM.o -L/usr/lib/aarch64-linux-gnu -lm -o build/lib.linux-aarch64-cpython-312/MACS3/Signal/HMMR_EM.cpython-312-aarch64-linux-gnu.so building 'MACS3.Signal.HMMR_Signal_Processing' extension aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.12 -c MACS3/Signal/HMMR_Signal_Processing.c -o build/temp.linux-aarch64-cpython-312/MACS3/Signal/HMMR_Signal_Processing.o -w -Ofast aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/MACS3/Signal/HMMR_Signal_Processing.o -L/usr/lib/aarch64-linux-gnu -lm -o build/lib.linux-aarch64-cpython-312/MACS3/Signal/HMMR_Signal_Processing.cpython-312-aarch64-linux-gnu.so building 'MACS3.Signal.HMMR_HMM' extension aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.12 -c MACS3/Signal/HMMR_HMM.c -o build/temp.linux-aarch64-cpython-312/MACS3/Signal/HMMR_HMM.o -w -Ofast aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/MACS3/Signal/HMMR_HMM.o -L/usr/lib/aarch64-linux-gnu -lm -o build/lib.linux-aarch64-cpython-312/MACS3/Signal/HMMR_HMM.cpython-312-aarch64-linux-gnu.so building 'MACS3.Signal.Prob' extension aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.12 -c MACS3/Signal/Prob.c -o build/temp.linux-aarch64-cpython-312/MACS3/Signal/Prob.o -w -Ofast aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/MACS3/Signal/Prob.o -L/usr/lib/aarch64-linux-gnu -lm -o build/lib.linux-aarch64-cpython-312/MACS3/Signal/Prob.cpython-312-aarch64-linux-gnu.so building 'MACS3.Signal.Region' extension aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.12 -c MACS3/Signal/Region.c -o build/temp.linux-aarch64-cpython-312/MACS3/Signal/Region.o -w -Ofast aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/MACS3/Signal/Region.o -L/usr/lib/aarch64-linux-gnu -o build/lib.linux-aarch64-cpython-312/MACS3/Signal/Region.cpython-312-aarch64-linux-gnu.so building 'MACS3.Signal.Pileup' extension aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.12 -c MACS3/Signal/Pileup.c -o build/temp.linux-aarch64-cpython-312/MACS3/Signal/Pileup.o -w -Ofast aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.12 -c MACS3/Signal/cPosValCalculation.c -o build/temp.linux-aarch64-cpython-312/MACS3/Signal/cPosValCalculation.o -w -Ofast aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/MACS3/Signal/Pileup.o build/temp.linux-aarch64-cpython-312/MACS3/Signal/cPosValCalculation.o -L/usr/lib/aarch64-linux-gnu -o build/lib.linux-aarch64-cpython-312/MACS3/Signal/Pileup.cpython-312-aarch64-linux-gnu.so building 'MACS3.Signal.PileupV2' extension aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.12 -c MACS3/Signal/PileupV2.c -o build/temp.linux-aarch64-cpython-312/MACS3/Signal/PileupV2.o -w -Ofast aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/MACS3/Signal/PileupV2.o -L/usr/lib/aarch64-linux-gnu -o build/lib.linux-aarch64-cpython-312/MACS3/Signal/PileupV2.cpython-312-aarch64-linux-gnu.so building 'MACS3.Signal.PeakModel' extension aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.12 -c MACS3/Signal/PeakModel.c -o build/temp.linux-aarch64-cpython-312/MACS3/Signal/PeakModel.o -w -Ofast aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/MACS3/Signal/PeakModel.o -L/usr/lib/aarch64-linux-gnu -o build/lib.linux-aarch64-cpython-312/MACS3/Signal/PeakModel.cpython-312-aarch64-linux-gnu.so building 'MACS3.Signal.PeakDetect' extension aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.12 -c MACS3/Signal/PeakDetect.c -o build/temp.linux-aarch64-cpython-312/MACS3/Signal/PeakDetect.o -w -Ofast aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/MACS3/Signal/PeakDetect.o -L/usr/lib/aarch64-linux-gnu -o build/lib.linux-aarch64-cpython-312/MACS3/Signal/PeakDetect.cpython-312-aarch64-linux-gnu.so building 'MACS3.Signal.SignalProcessing' extension aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.12 -c MACS3/Signal/SignalProcessing.c -o build/temp.linux-aarch64-cpython-312/MACS3/Signal/SignalProcessing.o -w -Ofast aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/MACS3/Signal/SignalProcessing.o -L/usr/lib/aarch64-linux-gnu -o build/lib.linux-aarch64-cpython-312/MACS3/Signal/SignalProcessing.cpython-312-aarch64-linux-gnu.so building 'MACS3.Signal.FixWidthTrack' extension aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.12 -c MACS3/Signal/FixWidthTrack.c -o build/temp.linux-aarch64-cpython-312/MACS3/Signal/FixWidthTrack.o -w -Ofast aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/MACS3/Signal/FixWidthTrack.o -L/usr/lib/aarch64-linux-gnu -o build/lib.linux-aarch64-cpython-312/MACS3/Signal/FixWidthTrack.cpython-312-aarch64-linux-gnu.so building 'MACS3.Signal.PairedEndTrack' extension aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.12 -c MACS3/Signal/PairedEndTrack.c -o build/temp.linux-aarch64-cpython-312/MACS3/Signal/PairedEndTrack.o -w -Ofast aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/MACS3/Signal/PairedEndTrack.o -L/usr/lib/aarch64-linux-gnu -o build/lib.linux-aarch64-cpython-312/MACS3/Signal/PairedEndTrack.cpython-312-aarch64-linux-gnu.so building 'MACS3.Signal.BedGraph' extension aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.12 -c MACS3/Signal/BedGraph.c -o build/temp.linux-aarch64-cpython-312/MACS3/Signal/BedGraph.o -w -Ofast aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/MACS3/Signal/BedGraph.o -L/usr/lib/aarch64-linux-gnu -lm -o build/lib.linux-aarch64-cpython-312/MACS3/Signal/BedGraph.cpython-312-aarch64-linux-gnu.so building 'MACS3.Signal.ScoreTrack' extension aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.12 -c MACS3/Signal/ScoreTrack.c -o build/temp.linux-aarch64-cpython-312/MACS3/Signal/ScoreTrack.o -w -Ofast aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/MACS3/Signal/ScoreTrack.o -L/usr/lib/aarch64-linux-gnu -lm -o build/lib.linux-aarch64-cpython-312/MACS3/Signal/ScoreTrack.cpython-312-aarch64-linux-gnu.so building 'MACS3.Signal.CallPeakUnit' extension aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.12 -c MACS3/Signal/CallPeakUnit.c -o build/temp.linux-aarch64-cpython-312/MACS3/Signal/CallPeakUnit.o -w -Ofast aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/MACS3/Signal/CallPeakUnit.o -L/usr/lib/aarch64-linux-gnu -lm -o build/lib.linux-aarch64-cpython-312/MACS3/Signal/CallPeakUnit.cpython-312-aarch64-linux-gnu.so building 'MACS3.Signal.VariantStat' extension aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.12 -c MACS3/Signal/VariantStat.c -o build/temp.linux-aarch64-cpython-312/MACS3/Signal/VariantStat.o -w -Ofast aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/MACS3/Signal/VariantStat.o -L/usr/lib/aarch64-linux-gnu -lm -o build/lib.linux-aarch64-cpython-312/MACS3/Signal/VariantStat.cpython-312-aarch64-linux-gnu.so building 'MACS3.Signal.ReadAlignment' extension aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.12 -c MACS3/Signal/ReadAlignment.c -o build/temp.linux-aarch64-cpython-312/MACS3/Signal/ReadAlignment.o -w -Ofast aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/MACS3/Signal/ReadAlignment.o -L/usr/lib/aarch64-linux-gnu -lm -o build/lib.linux-aarch64-cpython-312/MACS3/Signal/ReadAlignment.cpython-312-aarch64-linux-gnu.so building 'MACS3.Signal.RACollection' extension creating build/temp.linux-aarch64-cpython-312/MACS3/fermi-lite aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/python3/dist-packages/numpy/core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.12 -c MACS3/Signal/RACollection.c -o build/temp.linux-aarch64-cpython-312/MACS3/Signal/RACollection.o -w -Ofast -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/python3/dist-packages/numpy/core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.12 -c MACS3/Signal/swalign.c -o build/temp.linux-aarch64-cpython-312/MACS3/Signal/swalign.o -w -Ofast -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/python3/dist-packages/numpy/core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.12 -c MACS3/fermi-lite/bfc.c -o build/temp.linux-aarch64-cpython-312/MACS3/fermi-lite/bfc.o -w -Ofast -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/python3/dist-packages/numpy/core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.12 -c MACS3/fermi-lite/bseq.c -o build/temp.linux-aarch64-cpython-312/MACS3/fermi-lite/bseq.o -w -Ofast -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/python3/dist-packages/numpy/core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.12 -c MACS3/fermi-lite/bubble.c -o build/temp.linux-aarch64-cpython-312/MACS3/fermi-lite/bubble.o -w -Ofast -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/python3/dist-packages/numpy/core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.12 -c MACS3/fermi-lite/htab.c -o build/temp.linux-aarch64-cpython-312/MACS3/fermi-lite/htab.o -w -Ofast -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/python3/dist-packages/numpy/core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.12 -c MACS3/fermi-lite/ksw.c -o build/temp.linux-aarch64-cpython-312/MACS3/fermi-lite/ksw.o -w -Ofast -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/python3/dist-packages/numpy/core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.12 -c MACS3/fermi-lite/kthread.c -o build/temp.linux-aarch64-cpython-312/MACS3/fermi-lite/kthread.o -w -Ofast -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/python3/dist-packages/numpy/core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.12 -c MACS3/fermi-lite/mag.c -o build/temp.linux-aarch64-cpython-312/MACS3/fermi-lite/mag.o -w -Ofast -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/python3/dist-packages/numpy/core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.12 -c MACS3/fermi-lite/misc.c -o build/temp.linux-aarch64-cpython-312/MACS3/fermi-lite/misc.o -w -Ofast -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/python3/dist-packages/numpy/core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.12 -c MACS3/fermi-lite/mrope.c -o build/temp.linux-aarch64-cpython-312/MACS3/fermi-lite/mrope.o -w -Ofast -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/python3/dist-packages/numpy/core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.12 -c MACS3/fermi-lite/rld0.c -o build/temp.linux-aarch64-cpython-312/MACS3/fermi-lite/rld0.o -w -Ofast -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/python3/dist-packages/numpy/core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.12 -c MACS3/fermi-lite/rle.c -o build/temp.linux-aarch64-cpython-312/MACS3/fermi-lite/rle.o -w -Ofast -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/python3/dist-packages/numpy/core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.12 -c MACS3/fermi-lite/rope.c -o build/temp.linux-aarch64-cpython-312/MACS3/fermi-lite/rope.o -w -Ofast -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/python3/dist-packages/numpy/core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.12 -c MACS3/fermi-lite/unitig.c -o build/temp.linux-aarch64-cpython-312/MACS3/fermi-lite/unitig.o -w -Ofast -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/MACS3/Signal/RACollection.o build/temp.linux-aarch64-cpython-312/MACS3/Signal/swalign.o build/temp.linux-aarch64-cpython-312/MACS3/fermi-lite/bfc.o build/temp.linux-aarch64-cpython-312/MACS3/fermi-lite/bseq.o build/temp.linux-aarch64-cpython-312/MACS3/fermi-lite/bubble.o build/temp.linux-aarch64-cpython-312/MACS3/fermi-lite/htab.o build/temp.linux-aarch64-cpython-312/MACS3/fermi-lite/ksw.o build/temp.linux-aarch64-cpython-312/MACS3/fermi-lite/kthread.o build/temp.linux-aarch64-cpython-312/MACS3/fermi-lite/mag.o build/temp.linux-aarch64-cpython-312/MACS3/fermi-lite/misc.o build/temp.linux-aarch64-cpython-312/MACS3/fermi-lite/mrope.o build/temp.linux-aarch64-cpython-312/MACS3/fermi-lite/rld0.o build/temp.linux-aarch64-cpython-312/MACS3/fermi-lite/rle.o build/temp.linux-aarch64-cpython-312/MACS3/fermi-lite/rope.o build/temp.linux-aarch64-cpython-312/MACS3/fermi-lite/unitig.o -L/usr/lib/aarch64-linux-gnu -lm -lz -o build/lib.linux-aarch64-cpython-312/MACS3/Signal/RACollection.cpython-312-aarch64-linux-gnu.so building 'MACS3.Signal.UnitigRACollection' extension aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.12 -c MACS3/Signal/UnitigRACollection.c -o build/temp.linux-aarch64-cpython-312/MACS3/Signal/UnitigRACollection.o -w -Ofast aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/MACS3/Signal/UnitigRACollection.o -L/usr/lib/aarch64-linux-gnu -lm -o build/lib.linux-aarch64-cpython-312/MACS3/Signal/UnitigRACollection.cpython-312-aarch64-linux-gnu.so building 'MACS3.Signal.PosReadsInfo' extension aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.12 -c MACS3/Signal/PosReadsInfo.c -o build/temp.linux-aarch64-cpython-312/MACS3/Signal/PosReadsInfo.o -w -Ofast aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/MACS3/Signal/PosReadsInfo.o -L/usr/lib/aarch64-linux-gnu -lm -o build/lib.linux-aarch64-cpython-312/MACS3/Signal/PosReadsInfo.cpython-312-aarch64-linux-gnu.so building 'MACS3.Signal.PeakVariants' extension aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.12 -c MACS3/Signal/PeakVariants.c -o build/temp.linux-aarch64-cpython-312/MACS3/Signal/PeakVariants.o -w -Ofast aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/MACS3/Signal/PeakVariants.o -L/usr/lib/aarch64-linux-gnu -lm -o build/lib.linux-aarch64-cpython-312/MACS3/Signal/PeakVariants.cpython-312-aarch64-linux-gnu.so building 'MACS3.IO.Parser' extension creating build/temp.linux-aarch64-cpython-312/MACS3/IO aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.12 -c MACS3/IO/Parser.c -o build/temp.linux-aarch64-cpython-312/MACS3/IO/Parser.o -w -Ofast aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/MACS3/IO/Parser.o -L/usr/lib/aarch64-linux-gnu -o build/lib.linux-aarch64-cpython-312/MACS3/IO/Parser.cpython-312-aarch64-linux-gnu.so building 'MACS3.IO.PeakIO' extension aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.12 -c MACS3/IO/PeakIO.c -o build/temp.linux-aarch64-cpython-312/MACS3/IO/PeakIO.o -w -Ofast aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/MACS3/IO/PeakIO.o -L/usr/lib/aarch64-linux-gnu -o build/lib.linux-aarch64-cpython-312/MACS3/IO/PeakIO.cpython-312-aarch64-linux-gnu.so building 'MACS3.IO.BedGraphIO' extension aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.12 -c MACS3/IO/BedGraphIO.c -o build/temp.linux-aarch64-cpython-312/MACS3/IO/BedGraphIO.o -w -Ofast aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/MACS3/IO/BedGraphIO.o -L/usr/lib/aarch64-linux-gnu -o build/lib.linux-aarch64-cpython-312/MACS3/IO/BedGraphIO.cpython-312-aarch64-linux-gnu.so building 'MACS3.IO.BAM' extension aarch64-linux-gnu-gcc -fno-strict-overflow -Wsign-compare -DNDEBUG -g -O2 -Wall -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.12 -c MACS3/IO/BAM.c -o build/temp.linux-aarch64-cpython-312/MACS3/IO/BAM.o -w -Ofast aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-312/MACS3/IO/BAM.o -L/usr/lib/aarch64-linux-gnu -lm -o build/lib.linux-aarch64-cpython-312/MACS3/IO/BAM.cpython-312-aarch64-linux-gnu.so running build_scripts creating build/scripts-3.12 copying and adjusting bin/macs3 -> build/scripts-3.12 changing mode of build/scripts-3.12/macs3 from 644 to 755 installing to build/bdist.linux-aarch64/wheel running install running install_lib creating build/bdist.linux-aarch64 creating build/bdist.linux-aarch64/wheel creating build/bdist.linux-aarch64/wheel/MACS3 creating build/bdist.linux-aarch64/wheel/MACS3/Utilities copying build/lib.linux-aarch64-cpython-312/MACS3/Utilities/Constants.py -> build/bdist.linux-aarch64/wheel/MACS3/Utilities copying build/lib.linux-aarch64-cpython-312/MACS3/Utilities/Logger.py -> build/bdist.linux-aarch64/wheel/MACS3/Utilities copying build/lib.linux-aarch64-cpython-312/MACS3/Utilities/OptValidator.py -> build/bdist.linux-aarch64/wheel/MACS3/Utilities copying build/lib.linux-aarch64-cpython-312/MACS3/Utilities/__init__.py -> build/bdist.linux-aarch64/wheel/MACS3/Utilities creating build/bdist.linux-aarch64/wheel/MACS3/Commands copying build/lib.linux-aarch64-cpython-312/MACS3/Commands/__init__.py -> build/bdist.linux-aarch64/wheel/MACS3/Commands copying build/lib.linux-aarch64-cpython-312/MACS3/Commands/bdgbroadcall_cmd.py -> build/bdist.linux-aarch64/wheel/MACS3/Commands copying build/lib.linux-aarch64-cpython-312/MACS3/Commands/bdgcmp_cmd.py -> build/bdist.linux-aarch64/wheel/MACS3/Commands copying build/lib.linux-aarch64-cpython-312/MACS3/Commands/bdgdiff_cmd.py -> build/bdist.linux-aarch64/wheel/MACS3/Commands copying build/lib.linux-aarch64-cpython-312/MACS3/Commands/bdgopt_cmd.py -> build/bdist.linux-aarch64/wheel/MACS3/Commands copying build/lib.linux-aarch64-cpython-312/MACS3/Commands/bdgpeakcall_cmd.py -> build/bdist.linux-aarch64/wheel/MACS3/Commands copying build/lib.linux-aarch64-cpython-312/MACS3/Commands/callpeak_cmd.py -> build/bdist.linux-aarch64/wheel/MACS3/Commands copying build/lib.linux-aarch64-cpython-312/MACS3/Commands/callvar_cmd.py -> build/bdist.linux-aarch64/wheel/MACS3/Commands copying build/lib.linux-aarch64-cpython-312/MACS3/Commands/cmbreps_cmd.py -> build/bdist.linux-aarch64/wheel/MACS3/Commands copying build/lib.linux-aarch64-cpython-312/MACS3/Commands/diffpeak_cmd.py -> build/bdist.linux-aarch64/wheel/MACS3/Commands copying build/lib.linux-aarch64-cpython-312/MACS3/Commands/filterdup_cmd.py -> build/bdist.linux-aarch64/wheel/MACS3/Commands copying build/lib.linux-aarch64-cpython-312/MACS3/Commands/hmmratac_cmd.py -> build/bdist.linux-aarch64/wheel/MACS3/Commands copying build/lib.linux-aarch64-cpython-312/MACS3/Commands/pileup_cmd.py -> build/bdist.linux-aarch64/wheel/MACS3/Commands copying build/lib.linux-aarch64-cpython-312/MACS3/Commands/predictd_cmd.py -> build/bdist.linux-aarch64/wheel/MACS3/Commands copying build/lib.linux-aarch64-cpython-312/MACS3/Commands/randsample_cmd.py -> build/bdist.linux-aarch64/wheel/MACS3/Commands copying build/lib.linux-aarch64-cpython-312/MACS3/Commands/refinepeak_cmd.py -> build/bdist.linux-aarch64/wheel/MACS3/Commands creating build/bdist.linux-aarch64/wheel/MACS3/Signal copying build/lib.linux-aarch64-cpython-312/MACS3/Signal/PeakVariants.cpython-312-aarch64-linux-gnu.so -> build/bdist.linux-aarch64/wheel/MACS3/Signal copying build/lib.linux-aarch64-cpython-312/MACS3/Signal/PosReadsInfo.cpython-312-aarch64-linux-gnu.so -> build/bdist.linux-aarch64/wheel/MACS3/Signal copying build/lib.linux-aarch64-cpython-312/MACS3/Signal/UnitigRACollection.cpython-312-aarch64-linux-gnu.so -> build/bdist.linux-aarch64/wheel/MACS3/Signal copying build/lib.linux-aarch64-cpython-312/MACS3/Signal/RACollection.cpython-312-aarch64-linux-gnu.so -> build/bdist.linux-aarch64/wheel/MACS3/Signal copying build/lib.linux-aarch64-cpython-312/MACS3/Signal/ReadAlignment.cpython-312-aarch64-linux-gnu.so -> build/bdist.linux-aarch64/wheel/MACS3/Signal copying build/lib.linux-aarch64-cpython-312/MACS3/Signal/VariantStat.cpython-312-aarch64-linux-gnu.so -> build/bdist.linux-aarch64/wheel/MACS3/Signal copying build/lib.linux-aarch64-cpython-312/MACS3/Signal/CallPeakUnit.cpython-312-aarch64-linux-gnu.so -> build/bdist.linux-aarch64/wheel/MACS3/Signal copying build/lib.linux-aarch64-cpython-312/MACS3/Signal/ScoreTrack.cpython-312-aarch64-linux-gnu.so -> build/bdist.linux-aarch64/wheel/MACS3/Signal copying build/lib.linux-aarch64-cpython-312/MACS3/Signal/BedGraph.cpython-312-aarch64-linux-gnu.so -> build/bdist.linux-aarch64/wheel/MACS3/Signal copying build/lib.linux-aarch64-cpython-312/MACS3/Signal/PairedEndTrack.cpython-312-aarch64-linux-gnu.so -> build/bdist.linux-aarch64/wheel/MACS3/Signal copying build/lib.linux-aarch64-cpython-312/MACS3/Signal/FixWidthTrack.cpython-312-aarch64-linux-gnu.so -> build/bdist.linux-aarch64/wheel/MACS3/Signal copying build/lib.linux-aarch64-cpython-312/MACS3/Signal/SignalProcessing.cpython-312-aarch64-linux-gnu.so -> build/bdist.linux-aarch64/wheel/MACS3/Signal copying build/lib.linux-aarch64-cpython-312/MACS3/Signal/PeakDetect.cpython-312-aarch64-linux-gnu.so -> build/bdist.linux-aarch64/wheel/MACS3/Signal copying build/lib.linux-aarch64-cpython-312/MACS3/Signal/PeakModel.cpython-312-aarch64-linux-gnu.so -> build/bdist.linux-aarch64/wheel/MACS3/Signal copying build/lib.linux-aarch64-cpython-312/MACS3/Signal/PileupV2.cpython-312-aarch64-linux-gnu.so -> build/bdist.linux-aarch64/wheel/MACS3/Signal copying build/lib.linux-aarch64-cpython-312/MACS3/Signal/Pileup.cpython-312-aarch64-linux-gnu.so -> build/bdist.linux-aarch64/wheel/MACS3/Signal copying build/lib.linux-aarch64-cpython-312/MACS3/Signal/Region.cpython-312-aarch64-linux-gnu.so -> build/bdist.linux-aarch64/wheel/MACS3/Signal copying build/lib.linux-aarch64-cpython-312/MACS3/Signal/Prob.cpython-312-aarch64-linux-gnu.so -> build/bdist.linux-aarch64/wheel/MACS3/Signal copying build/lib.linux-aarch64-cpython-312/MACS3/Signal/HMMR_HMM.cpython-312-aarch64-linux-gnu.so -> build/bdist.linux-aarch64/wheel/MACS3/Signal copying build/lib.linux-aarch64-cpython-312/MACS3/Signal/HMMR_Signal_Processing.cpython-312-aarch64-linux-gnu.so -> build/bdist.linux-aarch64/wheel/MACS3/Signal copying build/lib.linux-aarch64-cpython-312/MACS3/Signal/HMMR_EM.cpython-312-aarch64-linux-gnu.so -> build/bdist.linux-aarch64/wheel/MACS3/Signal copying build/lib.linux-aarch64-cpython-312/MACS3/Signal/__init__.py -> build/bdist.linux-aarch64/wheel/MACS3/Signal creating build/bdist.linux-aarch64/wheel/MACS3/IO copying build/lib.linux-aarch64-cpython-312/MACS3/IO/BAM.cpython-312-aarch64-linux-gnu.so -> build/bdist.linux-aarch64/wheel/MACS3/IO copying build/lib.linux-aarch64-cpython-312/MACS3/IO/BedGraphIO.cpython-312-aarch64-linux-gnu.so -> build/bdist.linux-aarch64/wheel/MACS3/IO copying build/lib.linux-aarch64-cpython-312/MACS3/IO/PeakIO.cpython-312-aarch64-linux-gnu.so -> build/bdist.linux-aarch64/wheel/MACS3/IO copying build/lib.linux-aarch64-cpython-312/MACS3/IO/Parser.cpython-312-aarch64-linux-gnu.so -> build/bdist.linux-aarch64/wheel/MACS3/IO copying build/lib.linux-aarch64-cpython-312/MACS3/IO/OutputWriter.py -> build/bdist.linux-aarch64/wheel/MACS3/IO copying build/lib.linux-aarch64-cpython-312/MACS3/IO/__init__.py -> build/bdist.linux-aarch64/wheel/MACS3/IO copying build/lib.linux-aarch64-cpython-312/MACS3/__init__.py -> build/bdist.linux-aarch64/wheel/MACS3 running install_egg_info running egg_info creating MACS3.egg-info writing MACS3.egg-info/PKG-INFO writing dependency_links to MACS3.egg-info/dependency_links.txt writing requirements to MACS3.egg-info/requires.txt writing top-level names to MACS3.egg-info/top_level.txt writing manifest file 'MACS3.egg-info/SOURCES.txt' dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative reading manifest file 'MACS3.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching 'make_docker_base.sh' warning: no previously-included files matching '.ipynb_checkpoints/*' found anywhere in distribution adding license file 'LICENSE' writing manifest file 'MACS3.egg-info/SOURCES.txt' Copying MACS3.egg-info to build/bdist.linux-aarch64/wheel/MACS3-3.0.1.egg-info running install_scripts creating build/bdist.linux-aarch64/wheel/MACS3-3.0.1.data creating build/bdist.linux-aarch64/wheel/MACS3-3.0.1.data/scripts copying build/scripts-3.12/macs3 -> build/bdist.linux-aarch64/wheel/MACS3-3.0.1.data/scripts changing mode of build/bdist.linux-aarch64/wheel/MACS3-3.0.1.data/scripts/macs3 to 755 creating build/bdist.linux-aarch64/wheel/MACS3-3.0.1.dist-info/WHEEL creating '/build/reproducible-path/macs-3.0.1/.pybuild/cpython3_3.12_MACS3/.tmp-nfjj5ciz/MACS3-3.0.1-cp312-cp312-linux_aarch64.whl' and adding 'build/bdist.linux-aarch64/wheel' to it adding 'MACS3/__init__.py' adding 'MACS3/Commands/__init__.py' adding 'MACS3/Commands/bdgbroadcall_cmd.py' adding 'MACS3/Commands/bdgcmp_cmd.py' adding 'MACS3/Commands/bdgdiff_cmd.py' adding 'MACS3/Commands/bdgopt_cmd.py' adding 'MACS3/Commands/bdgpeakcall_cmd.py' adding 'MACS3/Commands/callpeak_cmd.py' adding 'MACS3/Commands/callvar_cmd.py' adding 'MACS3/Commands/cmbreps_cmd.py' adding 'MACS3/Commands/diffpeak_cmd.py' adding 'MACS3/Commands/filterdup_cmd.py' adding 'MACS3/Commands/hmmratac_cmd.py' adding 'MACS3/Commands/pileup_cmd.py' adding 'MACS3/Commands/predictd_cmd.py' adding 'MACS3/Commands/randsample_cmd.py' adding 'MACS3/Commands/refinepeak_cmd.py' adding 'MACS3/IO/BAM.cpython-312-aarch64-linux-gnu.so' adding 'MACS3/IO/BedGraphIO.cpython-312-aarch64-linux-gnu.so' adding 'MACS3/IO/OutputWriter.py' adding 'MACS3/IO/Parser.cpython-312-aarch64-linux-gnu.so' adding 'MACS3/IO/PeakIO.cpython-312-aarch64-linux-gnu.so' adding 'MACS3/IO/__init__.py' adding 'MACS3/Signal/BedGraph.cpython-312-aarch64-linux-gnu.so' adding 'MACS3/Signal/CallPeakUnit.cpython-312-aarch64-linux-gnu.so' adding 'MACS3/Signal/FixWidthTrack.cpython-312-aarch64-linux-gnu.so' adding 'MACS3/Signal/HMMR_EM.cpython-312-aarch64-linux-gnu.so' adding 'MACS3/Signal/HMMR_HMM.cpython-312-aarch64-linux-gnu.so' adding 'MACS3/Signal/HMMR_Signal_Processing.cpython-312-aarch64-linux-gnu.so' adding 'MACS3/Signal/PairedEndTrack.cpython-312-aarch64-linux-gnu.so' adding 'MACS3/Signal/PeakDetect.cpython-312-aarch64-linux-gnu.so' adding 'MACS3/Signal/PeakModel.cpython-312-aarch64-linux-gnu.so' adding 'MACS3/Signal/PeakVariants.cpython-312-aarch64-linux-gnu.so' adding 'MACS3/Signal/Pileup.cpython-312-aarch64-linux-gnu.so' adding 'MACS3/Signal/PileupV2.cpython-312-aarch64-linux-gnu.so' adding 'MACS3/Signal/PosReadsInfo.cpython-312-aarch64-linux-gnu.so' adding 'MACS3/Signal/Prob.cpython-312-aarch64-linux-gnu.so' adding 'MACS3/Signal/RACollection.cpython-312-aarch64-linux-gnu.so' adding 'MACS3/Signal/ReadAlignment.cpython-312-aarch64-linux-gnu.so' adding 'MACS3/Signal/Region.cpython-312-aarch64-linux-gnu.so' adding 'MACS3/Signal/ScoreTrack.cpython-312-aarch64-linux-gnu.so' adding 'MACS3/Signal/SignalProcessing.cpython-312-aarch64-linux-gnu.so' adding 'MACS3/Signal/UnitigRACollection.cpython-312-aarch64-linux-gnu.so' adding 'MACS3/Signal/VariantStat.cpython-312-aarch64-linux-gnu.so' adding 'MACS3/Signal/__init__.py' adding 'MACS3/Utilities/Constants.py' adding 'MACS3/Utilities/Logger.py' adding 'MACS3/Utilities/OptValidator.py' adding 'MACS3/Utilities/__init__.py' adding 'MACS3-3.0.1.data/scripts/macs3' adding 'MACS3-3.0.1.dist-info/LICENSE' adding 'MACS3-3.0.1.dist-info/METADATA' adding 'MACS3-3.0.1.dist-info/WHEEL' adding 'MACS3-3.0.1.dist-info/top_level.txt' adding 'MACS3-3.0.1.dist-info/RECORD' removing build/bdist.linux-aarch64/wheel Successfully built MACS3-3.0.1-cp312-cp312-linux_aarch64.whl I: pybuild plugin_pyproject:144: Unpacking wheel built for python3.12 with "installer" module I: pybuild plugin_pyproject:129: Building wheel for python3.11 with "build" module I: pybuild base:311: python3.11 -m build --skip-dependency-check --no-isolation --wheel --outdir /build/reproducible-path/macs-3.0.1/.pybuild/cpython3_3.11_MACS3 * Building wheel... running bdist_wheel running build running build_py creating build/lib.linux-aarch64-cpython-311 creating build/lib.linux-aarch64-cpython-311/MACS3 copying MACS3/__init__.py -> build/lib.linux-aarch64-cpython-311/MACS3 creating build/lib.linux-aarch64-cpython-311/MACS3/IO copying MACS3/IO/__init__.py -> build/lib.linux-aarch64-cpython-311/MACS3/IO copying MACS3/IO/OutputWriter.py -> build/lib.linux-aarch64-cpython-311/MACS3/IO creating build/lib.linux-aarch64-cpython-311/MACS3/Signal copying MACS3/Signal/__init__.py -> build/lib.linux-aarch64-cpython-311/MACS3/Signal creating build/lib.linux-aarch64-cpython-311/MACS3/Commands copying MACS3/Commands/refinepeak_cmd.py -> build/lib.linux-aarch64-cpython-311/MACS3/Commands copying MACS3/Commands/randsample_cmd.py -> build/lib.linux-aarch64-cpython-311/MACS3/Commands copying MACS3/Commands/predictd_cmd.py -> build/lib.linux-aarch64-cpython-311/MACS3/Commands copying MACS3/Commands/pileup_cmd.py -> build/lib.linux-aarch64-cpython-311/MACS3/Commands copying MACS3/Commands/hmmratac_cmd.py -> build/lib.linux-aarch64-cpython-311/MACS3/Commands copying MACS3/Commands/filterdup_cmd.py -> build/lib.linux-aarch64-cpython-311/MACS3/Commands copying MACS3/Commands/diffpeak_cmd.py -> build/lib.linux-aarch64-cpython-311/MACS3/Commands copying MACS3/Commands/cmbreps_cmd.py -> build/lib.linux-aarch64-cpython-311/MACS3/Commands copying MACS3/Commands/callvar_cmd.py -> build/lib.linux-aarch64-cpython-311/MACS3/Commands copying MACS3/Commands/callpeak_cmd.py -> build/lib.linux-aarch64-cpython-311/MACS3/Commands copying MACS3/Commands/bdgpeakcall_cmd.py -> build/lib.linux-aarch64-cpython-311/MACS3/Commands copying MACS3/Commands/bdgopt_cmd.py -> build/lib.linux-aarch64-cpython-311/MACS3/Commands copying MACS3/Commands/bdgdiff_cmd.py -> build/lib.linux-aarch64-cpython-311/MACS3/Commands copying MACS3/Commands/bdgcmp_cmd.py -> build/lib.linux-aarch64-cpython-311/MACS3/Commands copying MACS3/Commands/bdgbroadcall_cmd.py -> build/lib.linux-aarch64-cpython-311/MACS3/Commands copying MACS3/Commands/__init__.py -> build/lib.linux-aarch64-cpython-311/MACS3/Commands creating build/lib.linux-aarch64-cpython-311/MACS3/Utilities copying MACS3/Utilities/__init__.py -> build/lib.linux-aarch64-cpython-311/MACS3/Utilities copying MACS3/Utilities/OptValidator.py -> build/lib.linux-aarch64-cpython-311/MACS3/Utilities copying MACS3/Utilities/Logger.py -> build/lib.linux-aarch64-cpython-311/MACS3/Utilities copying MACS3/Utilities/Constants.py -> build/lib.linux-aarch64-cpython-311/MACS3/Utilities running build_ext building 'MACS3.Signal.HMMR_EM' extension creating build/temp.linux-aarch64-cpython-311 creating build/temp.linux-aarch64-cpython-311/MACS3 creating build/temp.linux-aarch64-cpython-311/MACS3/Signal aarch64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.11 -c MACS3/Signal/HMMR_EM.c -o build/temp.linux-aarch64-cpython-311/MACS3/Signal/HMMR_EM.o -w -Ofast aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-311/MACS3/Signal/HMMR_EM.o -L/usr/lib/aarch64-linux-gnu -lm -o build/lib.linux-aarch64-cpython-311/MACS3/Signal/HMMR_EM.cpython-311-aarch64-linux-gnu.so building 'MACS3.Signal.HMMR_Signal_Processing' extension aarch64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.11 -c MACS3/Signal/HMMR_Signal_Processing.c -o build/temp.linux-aarch64-cpython-311/MACS3/Signal/HMMR_Signal_Processing.o -w -Ofast aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-311/MACS3/Signal/HMMR_Signal_Processing.o -L/usr/lib/aarch64-linux-gnu -lm -o build/lib.linux-aarch64-cpython-311/MACS3/Signal/HMMR_Signal_Processing.cpython-311-aarch64-linux-gnu.so building 'MACS3.Signal.HMMR_HMM' extension aarch64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.11 -c MACS3/Signal/HMMR_HMM.c -o build/temp.linux-aarch64-cpython-311/MACS3/Signal/HMMR_HMM.o -w -Ofast aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-311/MACS3/Signal/HMMR_HMM.o -L/usr/lib/aarch64-linux-gnu -lm -o build/lib.linux-aarch64-cpython-311/MACS3/Signal/HMMR_HMM.cpython-311-aarch64-linux-gnu.so building 'MACS3.Signal.Prob' extension aarch64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.11 -c MACS3/Signal/Prob.c -o build/temp.linux-aarch64-cpython-311/MACS3/Signal/Prob.o -w -Ofast aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-311/MACS3/Signal/Prob.o -L/usr/lib/aarch64-linux-gnu -lm -o build/lib.linux-aarch64-cpython-311/MACS3/Signal/Prob.cpython-311-aarch64-linux-gnu.so building 'MACS3.Signal.Region' extension aarch64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.11 -c MACS3/Signal/Region.c -o build/temp.linux-aarch64-cpython-311/MACS3/Signal/Region.o -w -Ofast aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-311/MACS3/Signal/Region.o -L/usr/lib/aarch64-linux-gnu -o build/lib.linux-aarch64-cpython-311/MACS3/Signal/Region.cpython-311-aarch64-linux-gnu.so building 'MACS3.Signal.Pileup' extension aarch64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.11 -c MACS3/Signal/Pileup.c -o build/temp.linux-aarch64-cpython-311/MACS3/Signal/Pileup.o -w -Ofast aarch64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.11 -c MACS3/Signal/cPosValCalculation.c -o build/temp.linux-aarch64-cpython-311/MACS3/Signal/cPosValCalculation.o -w -Ofast aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-311/MACS3/Signal/Pileup.o build/temp.linux-aarch64-cpython-311/MACS3/Signal/cPosValCalculation.o -L/usr/lib/aarch64-linux-gnu -o build/lib.linux-aarch64-cpython-311/MACS3/Signal/Pileup.cpython-311-aarch64-linux-gnu.so building 'MACS3.Signal.PileupV2' extension aarch64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.11 -c MACS3/Signal/PileupV2.c -o build/temp.linux-aarch64-cpython-311/MACS3/Signal/PileupV2.o -w -Ofast aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-311/MACS3/Signal/PileupV2.o -L/usr/lib/aarch64-linux-gnu -o build/lib.linux-aarch64-cpython-311/MACS3/Signal/PileupV2.cpython-311-aarch64-linux-gnu.so building 'MACS3.Signal.PeakModel' extension aarch64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.11 -c MACS3/Signal/PeakModel.c -o build/temp.linux-aarch64-cpython-311/MACS3/Signal/PeakModel.o -w -Ofast aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-311/MACS3/Signal/PeakModel.o -L/usr/lib/aarch64-linux-gnu -o build/lib.linux-aarch64-cpython-311/MACS3/Signal/PeakModel.cpython-311-aarch64-linux-gnu.so building 'MACS3.Signal.PeakDetect' extension aarch64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.11 -c MACS3/Signal/PeakDetect.c -o build/temp.linux-aarch64-cpython-311/MACS3/Signal/PeakDetect.o -w -Ofast aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-311/MACS3/Signal/PeakDetect.o -L/usr/lib/aarch64-linux-gnu -o build/lib.linux-aarch64-cpython-311/MACS3/Signal/PeakDetect.cpython-311-aarch64-linux-gnu.so building 'MACS3.Signal.SignalProcessing' extension aarch64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.11 -c MACS3/Signal/SignalProcessing.c -o build/temp.linux-aarch64-cpython-311/MACS3/Signal/SignalProcessing.o -w -Ofast aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-311/MACS3/Signal/SignalProcessing.o -L/usr/lib/aarch64-linux-gnu -o build/lib.linux-aarch64-cpython-311/MACS3/Signal/SignalProcessing.cpython-311-aarch64-linux-gnu.so building 'MACS3.Signal.FixWidthTrack' extension aarch64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.11 -c MACS3/Signal/FixWidthTrack.c -o build/temp.linux-aarch64-cpython-311/MACS3/Signal/FixWidthTrack.o -w -Ofast aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-311/MACS3/Signal/FixWidthTrack.o -L/usr/lib/aarch64-linux-gnu -o build/lib.linux-aarch64-cpython-311/MACS3/Signal/FixWidthTrack.cpython-311-aarch64-linux-gnu.so building 'MACS3.Signal.PairedEndTrack' extension aarch64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.11 -c MACS3/Signal/PairedEndTrack.c -o build/temp.linux-aarch64-cpython-311/MACS3/Signal/PairedEndTrack.o -w -Ofast aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-311/MACS3/Signal/PairedEndTrack.o -L/usr/lib/aarch64-linux-gnu -o build/lib.linux-aarch64-cpython-311/MACS3/Signal/PairedEndTrack.cpython-311-aarch64-linux-gnu.so building 'MACS3.Signal.BedGraph' extension aarch64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.11 -c MACS3/Signal/BedGraph.c -o build/temp.linux-aarch64-cpython-311/MACS3/Signal/BedGraph.o -w -Ofast aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-311/MACS3/Signal/BedGraph.o -L/usr/lib/aarch64-linux-gnu -lm -o build/lib.linux-aarch64-cpython-311/MACS3/Signal/BedGraph.cpython-311-aarch64-linux-gnu.so building 'MACS3.Signal.ScoreTrack' extension aarch64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.11 -c MACS3/Signal/ScoreTrack.c -o build/temp.linux-aarch64-cpython-311/MACS3/Signal/ScoreTrack.o -w -Ofast aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-311/MACS3/Signal/ScoreTrack.o -L/usr/lib/aarch64-linux-gnu -lm -o build/lib.linux-aarch64-cpython-311/MACS3/Signal/ScoreTrack.cpython-311-aarch64-linux-gnu.so building 'MACS3.Signal.CallPeakUnit' extension aarch64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.11 -c MACS3/Signal/CallPeakUnit.c -o build/temp.linux-aarch64-cpython-311/MACS3/Signal/CallPeakUnit.o -w -Ofast aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-311/MACS3/Signal/CallPeakUnit.o -L/usr/lib/aarch64-linux-gnu -lm -o build/lib.linux-aarch64-cpython-311/MACS3/Signal/CallPeakUnit.cpython-311-aarch64-linux-gnu.so building 'MACS3.Signal.VariantStat' extension aarch64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.11 -c MACS3/Signal/VariantStat.c -o build/temp.linux-aarch64-cpython-311/MACS3/Signal/VariantStat.o -w -Ofast aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-311/MACS3/Signal/VariantStat.o -L/usr/lib/aarch64-linux-gnu -lm -o build/lib.linux-aarch64-cpython-311/MACS3/Signal/VariantStat.cpython-311-aarch64-linux-gnu.so building 'MACS3.Signal.ReadAlignment' extension aarch64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.11 -c MACS3/Signal/ReadAlignment.c -o build/temp.linux-aarch64-cpython-311/MACS3/Signal/ReadAlignment.o -w -Ofast aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-311/MACS3/Signal/ReadAlignment.o -L/usr/lib/aarch64-linux-gnu -lm -o build/lib.linux-aarch64-cpython-311/MACS3/Signal/ReadAlignment.cpython-311-aarch64-linux-gnu.so building 'MACS3.Signal.RACollection' extension creating build/temp.linux-aarch64-cpython-311/MACS3/fermi-lite aarch64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/python3/dist-packages/numpy/core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.11 -c MACS3/Signal/RACollection.c -o build/temp.linux-aarch64-cpython-311/MACS3/Signal/RACollection.o -w -Ofast -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP aarch64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/python3/dist-packages/numpy/core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.11 -c MACS3/Signal/swalign.c -o build/temp.linux-aarch64-cpython-311/MACS3/Signal/swalign.o -w -Ofast -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP aarch64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/python3/dist-packages/numpy/core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.11 -c MACS3/fermi-lite/bfc.c -o build/temp.linux-aarch64-cpython-311/MACS3/fermi-lite/bfc.o -w -Ofast -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP aarch64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/python3/dist-packages/numpy/core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.11 -c MACS3/fermi-lite/bseq.c -o build/temp.linux-aarch64-cpython-311/MACS3/fermi-lite/bseq.o -w -Ofast -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP aarch64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/python3/dist-packages/numpy/core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.11 -c MACS3/fermi-lite/bubble.c -o build/temp.linux-aarch64-cpython-311/MACS3/fermi-lite/bubble.o -w -Ofast -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP aarch64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/python3/dist-packages/numpy/core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.11 -c MACS3/fermi-lite/htab.c -o build/temp.linux-aarch64-cpython-311/MACS3/fermi-lite/htab.o -w -Ofast -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP aarch64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/python3/dist-packages/numpy/core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.11 -c MACS3/fermi-lite/ksw.c -o build/temp.linux-aarch64-cpython-311/MACS3/fermi-lite/ksw.o -w -Ofast -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP aarch64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/python3/dist-packages/numpy/core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.11 -c MACS3/fermi-lite/kthread.c -o build/temp.linux-aarch64-cpython-311/MACS3/fermi-lite/kthread.o -w -Ofast -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP aarch64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/python3/dist-packages/numpy/core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.11 -c MACS3/fermi-lite/mag.c -o build/temp.linux-aarch64-cpython-311/MACS3/fermi-lite/mag.o -w -Ofast -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP aarch64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/python3/dist-packages/numpy/core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.11 -c MACS3/fermi-lite/misc.c -o build/temp.linux-aarch64-cpython-311/MACS3/fermi-lite/misc.o -w -Ofast -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP aarch64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/python3/dist-packages/numpy/core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.11 -c MACS3/fermi-lite/mrope.c -o build/temp.linux-aarch64-cpython-311/MACS3/fermi-lite/mrope.o -w -Ofast -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP aarch64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/python3/dist-packages/numpy/core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.11 -c MACS3/fermi-lite/rld0.c -o build/temp.linux-aarch64-cpython-311/MACS3/fermi-lite/rld0.o -w -Ofast -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP aarch64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/python3/dist-packages/numpy/core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.11 -c MACS3/fermi-lite/rle.c -o build/temp.linux-aarch64-cpython-311/MACS3/fermi-lite/rle.o -w -Ofast -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP aarch64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/python3/dist-packages/numpy/core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.11 -c MACS3/fermi-lite/rope.c -o build/temp.linux-aarch64-cpython-311/MACS3/fermi-lite/rope.o -w -Ofast -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP aarch64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -IMACS3/Signal -I/usr/lib/python3/dist-packages/numpy/core/include -I./ -I./MACS3/fermi-lite/ -I./MACS3/Signal/ -I/usr/include/python3.11 -c MACS3/fermi-lite/unitig.c -o build/temp.linux-aarch64-cpython-311/MACS3/fermi-lite/unitig.o -w -Ofast -std=gnu99 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-311/MACS3/Signal/RACollection.o build/temp.linux-aarch64-cpython-311/MACS3/Signal/swalign.o build/temp.linux-aarch64-cpython-311/MACS3/fermi-lite/bfc.o build/temp.linux-aarch64-cpython-311/MACS3/fermi-lite/bseq.o build/temp.linux-aarch64-cpython-311/MACS3/fermi-lite/bubble.o build/temp.linux-aarch64-cpython-311/MACS3/fermi-lite/htab.o build/temp.linux-aarch64-cpython-311/MACS3/fermi-lite/ksw.o build/temp.linux-aarch64-cpython-311/MACS3/fermi-lite/kthread.o build/temp.linux-aarch64-cpython-311/MACS3/fermi-lite/mag.o build/temp.linux-aarch64-cpython-311/MACS3/fermi-lite/misc.o build/temp.linux-aarch64-cpython-311/MACS3/fermi-lite/mrope.o build/temp.linux-aarch64-cpython-311/MACS3/fermi-lite/rld0.o build/temp.linux-aarch64-cpython-311/MACS3/fermi-lite/rle.o build/temp.linux-aarch64-cpython-311/MACS3/fermi-lite/rope.o build/temp.linux-aarch64-cpython-311/MACS3/fermi-lite/unitig.o -L/usr/lib/aarch64-linux-gnu -lm -lz -o build/lib.linux-aarch64-cpython-311/MACS3/Signal/RACollection.cpython-311-aarch64-linux-gnu.so building 'MACS3.Signal.UnitigRACollection' extension aarch64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.11 -c MACS3/Signal/UnitigRACollection.c -o build/temp.linux-aarch64-cpython-311/MACS3/Signal/UnitigRACollection.o -w -Ofast aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-311/MACS3/Signal/UnitigRACollection.o -L/usr/lib/aarch64-linux-gnu -lm -o build/lib.linux-aarch64-cpython-311/MACS3/Signal/UnitigRACollection.cpython-311-aarch64-linux-gnu.so building 'MACS3.Signal.PosReadsInfo' extension aarch64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.11 -c MACS3/Signal/PosReadsInfo.c -o build/temp.linux-aarch64-cpython-311/MACS3/Signal/PosReadsInfo.o -w -Ofast aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-311/MACS3/Signal/PosReadsInfo.o -L/usr/lib/aarch64-linux-gnu -lm -o build/lib.linux-aarch64-cpython-311/MACS3/Signal/PosReadsInfo.cpython-311-aarch64-linux-gnu.so building 'MACS3.Signal.PeakVariants' extension aarch64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.11 -c MACS3/Signal/PeakVariants.c -o build/temp.linux-aarch64-cpython-311/MACS3/Signal/PeakVariants.o -w -Ofast aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-311/MACS3/Signal/PeakVariants.o -L/usr/lib/aarch64-linux-gnu -lm -o build/lib.linux-aarch64-cpython-311/MACS3/Signal/PeakVariants.cpython-311-aarch64-linux-gnu.so building 'MACS3.IO.Parser' extension creating build/temp.linux-aarch64-cpython-311/MACS3/IO aarch64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.11 -c MACS3/IO/Parser.c -o build/temp.linux-aarch64-cpython-311/MACS3/IO/Parser.o -w -Ofast aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-311/MACS3/IO/Parser.o -L/usr/lib/aarch64-linux-gnu -o build/lib.linux-aarch64-cpython-311/MACS3/IO/Parser.cpython-311-aarch64-linux-gnu.so building 'MACS3.IO.PeakIO' extension aarch64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.11 -c MACS3/IO/PeakIO.c -o build/temp.linux-aarch64-cpython-311/MACS3/IO/PeakIO.o -w -Ofast aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-311/MACS3/IO/PeakIO.o -L/usr/lib/aarch64-linux-gnu -o build/lib.linux-aarch64-cpython-311/MACS3/IO/PeakIO.cpython-311-aarch64-linux-gnu.so building 'MACS3.IO.BedGraphIO' extension aarch64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python3.11 -c MACS3/IO/BedGraphIO.c -o build/temp.linux-aarch64-cpython-311/MACS3/IO/BedGraphIO.o -w -Ofast aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-311/MACS3/IO/BedGraphIO.o -L/usr/lib/aarch64-linux-gnu -o build/lib.linux-aarch64-cpython-311/MACS3/IO/BedGraphIO.cpython-311-aarch64-linux-gnu.so building 'MACS3.IO.BAM' extension aarch64-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -Werror=implicit-function-declaration -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/lib/python3/dist-packages/numpy/core/include -I/usr/include/python3.11 -c MACS3/IO/BAM.c -o build/temp.linux-aarch64-cpython-311/MACS3/IO/BAM.o -w -Ofast aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/macs-3.0.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-311/MACS3/IO/BAM.o -L/usr/lib/aarch64-linux-gnu -lm -o build/lib.linux-aarch64-cpython-311/MACS3/IO/BAM.cpython-311-aarch64-linux-gnu.so running build_scripts creating build/scripts-3.11 copying and adjusting bin/macs3 -> build/scripts-3.11 changing mode of build/scripts-3.11/macs3 from 644 to 755 installing to build/bdist.linux-aarch64/wheel running install running install_lib creating build/bdist.linux-aarch64/wheel creating build/bdist.linux-aarch64/wheel/MACS3 creating build/bdist.linux-aarch64/wheel/MACS3/Utilities copying build/lib.linux-aarch64-cpython-311/MACS3/Utilities/Constants.py -> build/bdist.linux-aarch64/wheel/MACS3/Utilities copying build/lib.linux-aarch64-cpython-311/MACS3/Utilities/Logger.py -> build/bdist.linux-aarch64/wheel/MACS3/Utilities copying build/lib.linux-aarch64-cpython-311/MACS3/Utilities/OptValidator.py -> build/bdist.linux-aarch64/wheel/MACS3/Utilities copying build/lib.linux-aarch64-cpython-311/MACS3/Utilities/__init__.py -> build/bdist.linux-aarch64/wheel/MACS3/Utilities creating build/bdist.linux-aarch64/wheel/MACS3/Commands copying build/lib.linux-aarch64-cpython-311/MACS3/Commands/__init__.py -> build/bdist.linux-aarch64/wheel/MACS3/Commands copying build/lib.linux-aarch64-cpython-311/MACS3/Commands/bdgbroadcall_cmd.py -> build/bdist.linux-aarch64/wheel/MACS3/Commands copying build/lib.linux-aarch64-cpython-311/MACS3/Commands/bdgcmp_cmd.py -> build/bdist.linux-aarch64/wheel/MACS3/Commands copying build/lib.linux-aarch64-cpython-311/MACS3/Commands/bdgdiff_cmd.py -> build/bdist.linux-aarch64/wheel/MACS3/Commands copying build/lib.linux-aarch64-cpython-311/MACS3/Commands/bdgopt_cmd.py -> build/bdist.linux-aarch64/wheel/MACS3/Commands copying build/lib.linux-aarch64-cpython-311/MACS3/Commands/bdgpeakcall_cmd.py -> build/bdist.linux-aarch64/wheel/MACS3/Commands copying build/lib.linux-aarch64-cpython-311/MACS3/Commands/callpeak_cmd.py -> build/bdist.linux-aarch64/wheel/MACS3/Commands copying build/lib.linux-aarch64-cpython-311/MACS3/Commands/callvar_cmd.py -> build/bdist.linux-aarch64/wheel/MACS3/Commands copying build/lib.linux-aarch64-cpython-311/MACS3/Commands/cmbreps_cmd.py -> build/bdist.linux-aarch64/wheel/MACS3/Commands copying build/lib.linux-aarch64-cpython-311/MACS3/Commands/diffpeak_cmd.py -> build/bdist.linux-aarch64/wheel/MACS3/Commands copying build/lib.linux-aarch64-cpython-311/MACS3/Commands/filterdup_cmd.py -> build/bdist.linux-aarch64/wheel/MACS3/Commands copying build/lib.linux-aarch64-cpython-311/MACS3/Commands/hmmratac_cmd.py -> build/bdist.linux-aarch64/wheel/MACS3/Commands copying build/lib.linux-aarch64-cpython-311/MACS3/Commands/pileup_cmd.py -> build/bdist.linux-aarch64/wheel/MACS3/Commands copying build/lib.linux-aarch64-cpython-311/MACS3/Commands/predictd_cmd.py -> build/bdist.linux-aarch64/wheel/MACS3/Commands copying build/lib.linux-aarch64-cpython-311/MACS3/Commands/randsample_cmd.py -> build/bdist.linux-aarch64/wheel/MACS3/Commands copying build/lib.linux-aarch64-cpython-311/MACS3/Commands/refinepeak_cmd.py -> build/bdist.linux-aarch64/wheel/MACS3/Commands creating build/bdist.linux-aarch64/wheel/MACS3/Signal copying build/lib.linux-aarch64-cpython-311/MACS3/Signal/PeakVariants.cpython-311-aarch64-linux-gnu.so -> build/bdist.linux-aarch64/wheel/MACS3/Signal copying build/lib.linux-aarch64-cpython-311/MACS3/Signal/PosReadsInfo.cpython-311-aarch64-linux-gnu.so -> build/bdist.linux-aarch64/wheel/MACS3/Signal copying build/lib.linux-aarch64-cpython-311/MACS3/Signal/UnitigRACollection.cpython-311-aarch64-linux-gnu.so -> build/bdist.linux-aarch64/wheel/MACS3/Signal copying build/lib.linux-aarch64-cpython-311/MACS3/Signal/RACollection.cpython-311-aarch64-linux-gnu.so -> build/bdist.linux-aarch64/wheel/MACS3/Signal copying build/lib.linux-aarch64-cpython-311/MACS3/Signal/ReadAlignment.cpython-311-aarch64-linux-gnu.so -> build/bdist.linux-aarch64/wheel/MACS3/Signal copying build/lib.linux-aarch64-cpython-311/MACS3/Signal/VariantStat.cpython-311-aarch64-linux-gnu.so -> build/bdist.linux-aarch64/wheel/MACS3/Signal copying build/lib.linux-aarch64-cpython-311/MACS3/Signal/CallPeakUnit.cpython-311-aarch64-linux-gnu.so -> build/bdist.linux-aarch64/wheel/MACS3/Signal copying build/lib.linux-aarch64-cpython-311/MACS3/Signal/ScoreTrack.cpython-311-aarch64-linux-gnu.so -> build/bdist.linux-aarch64/wheel/MACS3/Signal copying build/lib.linux-aarch64-cpython-311/MACS3/Signal/BedGraph.cpython-311-aarch64-linux-gnu.so -> build/bdist.linux-aarch64/wheel/MACS3/Signal copying build/lib.linux-aarch64-cpython-311/MACS3/Signal/PairedEndTrack.cpython-311-aarch64-linux-gnu.so -> build/bdist.linux-aarch64/wheel/MACS3/Signal copying build/lib.linux-aarch64-cpython-311/MACS3/Signal/FixWidthTrack.cpython-311-aarch64-linux-gnu.so -> build/bdist.linux-aarch64/wheel/MACS3/Signal copying build/lib.linux-aarch64-cpython-311/MACS3/Signal/SignalProcessing.cpython-311-aarch64-linux-gnu.so -> build/bdist.linux-aarch64/wheel/MACS3/Signal copying build/lib.linux-aarch64-cpython-311/MACS3/Signal/PeakDetect.cpython-311-aarch64-linux-gnu.so -> build/bdist.linux-aarch64/wheel/MACS3/Signal copying build/lib.linux-aarch64-cpython-311/MACS3/Signal/PeakModel.cpython-311-aarch64-linux-gnu.so -> build/bdist.linux-aarch64/wheel/MACS3/Signal copying build/lib.linux-aarch64-cpython-311/MACS3/Signal/PileupV2.cpython-311-aarch64-linux-gnu.so -> build/bdist.linux-aarch64/wheel/MACS3/Signal copying build/lib.linux-aarch64-cpython-311/MACS3/Signal/Pileup.cpython-311-aarch64-linux-gnu.so -> build/bdist.linux-aarch64/wheel/MACS3/Signal copying build/lib.linux-aarch64-cpython-311/MACS3/Signal/Region.cpython-311-aarch64-linux-gnu.so -> build/bdist.linux-aarch64/wheel/MACS3/Signal copying build/lib.linux-aarch64-cpython-311/MACS3/Signal/Prob.cpython-311-aarch64-linux-gnu.so -> build/bdist.linux-aarch64/wheel/MACS3/Signal copying build/lib.linux-aarch64-cpython-311/MACS3/Signal/HMMR_HMM.cpython-311-aarch64-linux-gnu.so -> build/bdist.linux-aarch64/wheel/MACS3/Signal copying build/lib.linux-aarch64-cpython-311/MACS3/Signal/HMMR_Signal_Processing.cpython-311-aarch64-linux-gnu.so -> build/bdist.linux-aarch64/wheel/MACS3/Signal copying build/lib.linux-aarch64-cpython-311/MACS3/Signal/HMMR_EM.cpython-311-aarch64-linux-gnu.so -> build/bdist.linux-aarch64/wheel/MACS3/Signal copying build/lib.linux-aarch64-cpython-311/MACS3/Signal/__init__.py -> build/bdist.linux-aarch64/wheel/MACS3/Signal creating build/bdist.linux-aarch64/wheel/MACS3/IO copying build/lib.linux-aarch64-cpython-311/MACS3/IO/BAM.cpython-311-aarch64-linux-gnu.so -> build/bdist.linux-aarch64/wheel/MACS3/IO copying build/lib.linux-aarch64-cpython-311/MACS3/IO/BedGraphIO.cpython-311-aarch64-linux-gnu.so -> build/bdist.linux-aarch64/wheel/MACS3/IO copying build/lib.linux-aarch64-cpython-311/MACS3/IO/PeakIO.cpython-311-aarch64-linux-gnu.so -> build/bdist.linux-aarch64/wheel/MACS3/IO copying build/lib.linux-aarch64-cpython-311/MACS3/IO/Parser.cpython-311-aarch64-linux-gnu.so -> build/bdist.linux-aarch64/wheel/MACS3/IO copying build/lib.linux-aarch64-cpython-311/MACS3/IO/OutputWriter.py -> build/bdist.linux-aarch64/wheel/MACS3/IO copying build/lib.linux-aarch64-cpython-311/MACS3/IO/__init__.py -> build/bdist.linux-aarch64/wheel/MACS3/IO copying build/lib.linux-aarch64-cpython-311/MACS3/__init__.py -> build/bdist.linux-aarch64/wheel/MACS3 running install_egg_info running egg_info writing MACS3.egg-info/PKG-INFO writing dependency_links to MACS3.egg-info/dependency_links.txt writing requirements to MACS3.egg-info/requires.txt writing top-level names to MACS3.egg-info/top_level.txt dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/arrayscalars.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarrayobject.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ndarraytypes.h won't be automatically included in the manifest: the path must be relative dependency /usr/lib/python3/dist-packages/numpy/core/include/numpy/ufuncobject.h won't be automatically included in the manifest: the path must be relative reading manifest file 'MACS3.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching 'make_docker_base.sh' warning: no previously-included files matching '.ipynb_checkpoints/*' found anywhere in distribution adding license file 'LICENSE' writing manifest file 'MACS3.egg-info/SOURCES.txt' Copying MACS3.egg-info to build/bdist.linux-aarch64/wheel/MACS3-3.0.1.egg-info running install_scripts creating build/bdist.linux-aarch64/wheel/MACS3-3.0.1.data creating build/bdist.linux-aarch64/wheel/MACS3-3.0.1.data/scripts copying build/scripts-3.11/macs3 -> build/bdist.linux-aarch64/wheel/MACS3-3.0.1.data/scripts changing mode of build/bdist.linux-aarch64/wheel/MACS3-3.0.1.data/scripts/macs3 to 755 creating build/bdist.linux-aarch64/wheel/MACS3-3.0.1.dist-info/WHEEL creating '/build/reproducible-path/macs-3.0.1/.pybuild/cpython3_3.11_MACS3/.tmp-z8_1c0_w/MACS3-3.0.1-cp311-cp311-linux_aarch64.whl' and adding 'build/bdist.linux-aarch64/wheel' to it adding 'MACS3/__init__.py' adding 'MACS3/Commands/__init__.py' adding 'MACS3/Commands/bdgbroadcall_cmd.py' adding 'MACS3/Commands/bdgcmp_cmd.py' adding 'MACS3/Commands/bdgdiff_cmd.py' adding 'MACS3/Commands/bdgopt_cmd.py' adding 'MACS3/Commands/bdgpeakcall_cmd.py' adding 'MACS3/Commands/callpeak_cmd.py' adding 'MACS3/Commands/callvar_cmd.py' adding 'MACS3/Commands/cmbreps_cmd.py' adding 'MACS3/Commands/diffpeak_cmd.py' adding 'MACS3/Commands/filterdup_cmd.py' adding 'MACS3/Commands/hmmratac_cmd.py' adding 'MACS3/Commands/pileup_cmd.py' adding 'MACS3/Commands/predictd_cmd.py' adding 'MACS3/Commands/randsample_cmd.py' adding 'MACS3/Commands/refinepeak_cmd.py' adding 'MACS3/IO/BAM.cpython-311-aarch64-linux-gnu.so' adding 'MACS3/IO/BedGraphIO.cpython-311-aarch64-linux-gnu.so' adding 'MACS3/IO/OutputWriter.py' adding 'MACS3/IO/Parser.cpython-311-aarch64-linux-gnu.so' adding 'MACS3/IO/PeakIO.cpython-311-aarch64-linux-gnu.so' adding 'MACS3/IO/__init__.py' adding 'MACS3/Signal/BedGraph.cpython-311-aarch64-linux-gnu.so' adding 'MACS3/Signal/CallPeakUnit.cpython-311-aarch64-linux-gnu.so' adding 'MACS3/Signal/FixWidthTrack.cpython-311-aarch64-linux-gnu.so' adding 'MACS3/Signal/HMMR_EM.cpython-311-aarch64-linux-gnu.so' adding 'MACS3/Signal/HMMR_HMM.cpython-311-aarch64-linux-gnu.so' adding 'MACS3/Signal/HMMR_Signal_Processing.cpython-311-aarch64-linux-gnu.so' adding 'MACS3/Signal/PairedEndTrack.cpython-311-aarch64-linux-gnu.so' adding 'MACS3/Signal/PeakDetect.cpython-311-aarch64-linux-gnu.so' adding 'MACS3/Signal/PeakModel.cpython-311-aarch64-linux-gnu.so' adding 'MACS3/Signal/PeakVariants.cpython-311-aarch64-linux-gnu.so' adding 'MACS3/Signal/Pileup.cpython-311-aarch64-linux-gnu.so' adding 'MACS3/Signal/PileupV2.cpython-311-aarch64-linux-gnu.so' adding 'MACS3/Signal/PosReadsInfo.cpython-311-aarch64-linux-gnu.so' adding 'MACS3/Signal/Prob.cpython-311-aarch64-linux-gnu.so' adding 'MACS3/Signal/RACollection.cpython-311-aarch64-linux-gnu.so' adding 'MACS3/Signal/ReadAlignment.cpython-311-aarch64-linux-gnu.so' adding 'MACS3/Signal/Region.cpython-311-aarch64-linux-gnu.so' adding 'MACS3/Signal/ScoreTrack.cpython-311-aarch64-linux-gnu.so' adding 'MACS3/Signal/SignalProcessing.cpython-311-aarch64-linux-gnu.so' adding 'MACS3/Signal/UnitigRACollection.cpython-311-aarch64-linux-gnu.so' adding 'MACS3/Signal/VariantStat.cpython-311-aarch64-linux-gnu.so' adding 'MACS3/Signal/__init__.py' adding 'MACS3/Utilities/Constants.py' adding 'MACS3/Utilities/Logger.py' adding 'MACS3/Utilities/OptValidator.py' adding 'MACS3/Utilities/__init__.py' adding 'MACS3-3.0.1.data/scripts/macs3' adding 'MACS3-3.0.1.dist-info/LICENSE' adding 'MACS3-3.0.1.dist-info/METADATA' adding 'MACS3-3.0.1.dist-info/WHEEL' adding 'MACS3-3.0.1.dist-info/top_level.txt' adding 'MACS3-3.0.1.dist-info/RECORD' removing build/bdist.linux-aarch64/wheel Successfully built MACS3-3.0.1-cp311-cp311-linux_aarch64.whl I: pybuild plugin_pyproject:144: Unpacking wheel built for python3.11 with "installer" module PYTHONPATH=./.pybuild/cpython3_$(py3versions -v -d)_MACS3/build/ help2man \ --no-discard-stderr --no-info \ --name "macs3 \- Model\-based Analysis for ChIP\-Sequencing" "python3 bin/macs3" > debian/macs3.1 for subcommand in callpeak bdgpeakcall bdgbroadcall bdgcmp bdgopt cmbreps bdgdiff filterdup predictd pileup randsample refinepeak; do printf \ "[NAME]\nmac3_${subcommand} \- Model\-based Analysis for ChIP\-Sequencing\n" \ > debian/macs3_${subcommand}-man-include; done for subcommand in callpeak bdgpeakcall bdgbroadcall bdgcmp bdgopt cmbreps bdgdiff filterdup predictd pileup randsample refinepeak; do \ PYTHONPATH=./.pybuild/cpython3_$(py3versions -v -d)_MACS3/build/ help2man \ --no-discard-stderr --no-info --version-string="3.0.1" \ --include debian/macs3_${subcommand}-man-include \ "python3 bin/macs3 ${subcommand}" > \ debian/macs3_${subcommand}.1; done make[1]: Leaving directory '/build/reproducible-path/macs-3.0.1' debian/rules override_dh_auto_test make[1]: Entering directory '/build/reproducible-path/macs-3.0.1' dh_auto_test I: pybuild base:311: cd /build/reproducible-path/macs-3.0.1/.pybuild/cpython3_3.12_MACS3/build; python3.12 -m pytest test ============================= test session starts ============================== platform linux -- Python 3.12.3, pytest-7.4.4, pluggy-1.5.0 rootdir: /build/reproducible-path/macs-3.0.1 collected 64 items test/test_BAMBAI.py ........... [ 17%] test/test_BedGraph.py .. [ 20%] test/test_FixWidthTrack.py .... [ 26%] test/test_HMMR_HMM.py . [ 28%] test/test_PairedEndTrack.py .... [ 34%] test/test_Parser.py ... [ 39%] test/test_PeakIO.py . [ 40%] test/test_Pileup.py .......... [ 56%] test/test_Prob.py ................ [ 81%] test/test_Region.py ..... [ 89%] test/test_ScoreTrack.py .... [ 95%] test/test_SignalProcessing.py s. [ 98%] test/test_online.py . [100%] ======================== 63 passed, 1 skipped in 16.89s ======================== I: pybuild base:311: cd /build/reproducible-path/macs-3.0.1/.pybuild/cpython3_3.11_MACS3/build; python3.11 -m pytest test ============================= test session starts ============================== platform linux -- Python 3.11.9, pytest-7.4.4, pluggy-1.5.0 rootdir: /build/reproducible-path/macs-3.0.1 collected 64 items test/test_BAMBAI.py ........... [ 17%] test/test_BedGraph.py .. [ 20%] test/test_FixWidthTrack.py .... [ 26%] test/test_HMMR_HMM.py . [ 28%] test/test_PairedEndTrack.py .... [ 34%] test/test_Parser.py ... [ 39%] test/test_PeakIO.py . [ 40%] test/test_Pileup.py .......... [ 56%] test/test_Prob.py ................ [ 81%] test/test_Region.py ..... [ 89%] test/test_ScoreTrack.py .... [ 95%] test/test_SignalProcessing.py s. [ 98%] test/test_online.py . [100%] ======================== 63 passed, 1 skipped in 18.24s ======================== make[1]: Leaving directory '/build/reproducible-path/macs-3.0.1' create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=pybuild dh_prep -O--buildsystem=pybuild dh_auto_install --destdir=debian/macs/ -O--buildsystem=pybuild I: pybuild plugin_pyproject:178: Copying package built for python3.12 to destdir I: pybuild plugin_pyproject:178: Copying package built for python3.11 to destdir dh_installdocs -O--buildsystem=pybuild dh_installchangelogs -O--buildsystem=pybuild dh_installexamples -O--buildsystem=pybuild dh_installman -O--buildsystem=pybuild debian/rules execute_before_dh_python3 make[1]: Entering directory '/build/reproducible-path/macs-3.0.1' dh_numpy3 make[1]: Leaving directory '/build/reproducible-path/macs-3.0.1' dh_python3 -O--buildsystem=pybuild dh_installsystemduser -O--buildsystem=pybuild dh_lintian -O--buildsystem=pybuild dh_perl -O--buildsystem=pybuild dh_link -O--buildsystem=pybuild dh_strip_nondeterminism -O--buildsystem=pybuild dh_compress -O--buildsystem=pybuild dh_fixperms -O--buildsystem=pybuild dh_missing -O--buildsystem=pybuild dh_dwz -a -O--buildsystem=pybuild dh_strip -a -O--buildsystem=pybuild dh_makeshlibs -a -O--buildsystem=pybuild dh_shlibdeps -a -O--buildsystem=pybuild dh_installdeb -O--buildsystem=pybuild dh_gencontrol -O--buildsystem=pybuild dh_md5sums -O--buildsystem=pybuild dh_builddeb -O--buildsystem=pybuild dpkg-deb: building package 'macs-dbgsym' in '../macs-dbgsym_3.0.1-2_arm64.deb'. dpkg-deb: building package 'macs' in '../macs_3.0.1-2_arm64.deb'. dpkg-genbuildinfo --build=binary -O../macs_3.0.1-2_arm64.buildinfo dpkg-genchanges --build=binary -O../macs_3.0.1-2_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-source: info: using options from macs-3.0.1/debian/source/options: --extend-diff-ignore=(^|/)(.*\.c)$|.*[.]egg-info/ dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/983179 and its subdirectories I: Current time: Tue Jun 3 13:51:44 -12 2025 I: pbuilder-time-stamp: 1749001904 Wed May 1 19:28:47 UTC 2024 I: 1st build successful. Starting 2nd build on remote node codethink04-arm64.debian.net. Wed May 1 19:28:47 UTC 2024 I: Preparing to do remote build '2' on codethink04-arm64.debian.net. Wed May 1 19:44:05 UTC 2024 I: Deleting $TMPDIR on codethink04-arm64.debian.net. Wed May 1 19:44:06 UTC 2024 I: macs_3.0.1-2_arm64.changes: Format: 1.8 Date: Wed, 28 Feb 2024 12:39:52 +0100 Source: macs Binary: macs macs-dbgsym Architecture: arm64 Version: 3.0.1-2 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Michael R. Crusoe Description: macs - Model-based Analysis of ChIP-Seq on short reads sequencers Changes: macs (3.0.1-2) unstable; urgency=medium . * d/rules: make use of dh_numpy3 to add the numpy ABI dependency. * d/patches/spelling: fix typos. * d/lintian-overrides: update to match change in warnings. Checksums-Sha1: 9a02f21655876c95f9ae37f878af118765a31215 23208832 macs-dbgsym_3.0.1-2_arm64.deb f47320eca80e3be4e2ac46dec1ed6e8fd6b8fe96 7358 macs_3.0.1-2_arm64.buildinfo b167befa62203613a64c4a48f38509cc9d711e02 4022424 macs_3.0.1-2_arm64.deb Checksums-Sha256: 5f8938f422e6362073c80814b5761670d86f37daffce642d4e2b280c76df7d07 23208832 macs-dbgsym_3.0.1-2_arm64.deb 6c9d111569e50bc60598dc85f97313f41124e8dc429942040a5a238a6fd64f3f 7358 macs_3.0.1-2_arm64.buildinfo bce165ab751feefabbb33366d40c9d6d4667f1c12a07cbe9e3675fdb5a886ccf 4022424 macs_3.0.1-2_arm64.deb Files: ec766a0ff1922e82ee46fdd94b746b20 23208832 debug optional macs-dbgsym_3.0.1-2_arm64.deb d45c2d4d6562d9771ae6938db4aad9be 7358 science optional macs_3.0.1-2_arm64.buildinfo 2b152bedd310efdbed78a3be3d5e83f1 4022424 science optional macs_3.0.1-2_arm64.deb Wed May 1 19:44:07 UTC 2024 I: diffoscope 265 will be used to compare the two builds: Running as unit: rb-diffoscope-arm64_23-39351.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.a07ZJ1mi/macs_3.0.1-2.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.a07ZJ1mi/macs_3.0.1-2.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.a07ZJ1mi/macs_3.0.1-2.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.a07ZJ1mi/b1/macs_3.0.1-2_arm64.changes /srv/reproducible-results/rbuild-debian/r-b-build.a07ZJ1mi/b2/macs_3.0.1-2_arm64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.652s) 0.652s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.309s) 0.309s 12 calls diffoscope.comparators.binary.FilesystemFile ## specialize (total time: 0.000s) 0.000s 1 call specialize Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 985ms CPU time consumed: 979ms Wed May 1 19:44:09 UTC 2024 I: diffoscope 265 found no differences in the changes files, and a .buildinfo file also exists. Wed May 1 19:44:09 UTC 2024 I: macs from trixie built successfully and reproducibly on arm64. Wed May 1 19:44:11 UTC 2024 I: Submitting .buildinfo files to external archives: Wed May 1 19:44:11 UTC 2024 I: Submitting 12K b1/macs_3.0.1-2_arm64.buildinfo.asc Wed May 1 19:44:12 UTC 2024 I: Submitting 12K b2/macs_3.0.1-2_arm64.buildinfo.asc Wed May 1 19:44:13 UTC 2024 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Wed May 1 19:44:13 UTC 2024 I: Done submitting .buildinfo files. Wed May 1 19:44:13 UTC 2024 I: Removing signed macs_3.0.1-2_arm64.buildinfo.asc files: removed './b1/macs_3.0.1-2_arm64.buildinfo.asc' removed './b2/macs_3.0.1-2_arm64.buildinfo.asc'