Fri Feb 7 05:26:40 UTC 2025 I: starting to build librg-utils-perl/trixie/arm64 on jenkins on '2025-02-07 05:26' Fri Feb 7 05:26:40 UTC 2025 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/arm64_3/76611/console.log Fri Feb 7 05:26:40 UTC 2025 I: Downloading source for trixie/librg-utils-perl=1.0.43-9 --2025-02-07 05:26:40-- http://deb.debian.org/debian/pool/main/libr/librg-utils-perl/librg-utils-perl_1.0.43-9.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2131 (2.1K) [text/prs.lines.tag] Saving to: ‘librg-utils-perl_1.0.43-9.dsc’ 0K .. 100% 210M=0s 2025-02-07 05:26:40 (210 MB/s) - ‘librg-utils-perl_1.0.43-9.dsc’ saved [2131/2131] Fri Feb 7 05:26:40 UTC 2025 I: librg-utils-perl_1.0.43-9.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: librg-utils-perl Binary: librg-utils-perl Architecture: all Version: 1.0.43-9 Maintainer: Debian Med Packaging Team Uploaders: Guy Yachdav , Laszlo Kajan , Andreas Tille Homepage: https://predictprotein.org/ Standards-Version: 4.7.0 Vcs-Browser: https://salsa.debian.org/med-team/librg-utils-perl Vcs-Git: https://salsa.debian.org/med-team/librg-utils-perl.git Build-Depends: debhelper-compat (= 13), perl, libmodule-build-perl, debhelper Package-List: librg-utils-perl deb perl optional arch=all Checksums-Sha1: 7f502f36e38414d7046ad9295c0e6c88c09d34f9 222433 librg-utils-perl_1.0.43.orig.tar.gz 5ce64da62010d10dc0a5ab415e383f3de88d3f1f 4512 librg-utils-perl_1.0.43-9.debian.tar.xz Checksums-Sha256: 961dda0196688e156a0702ff4609067a3454199ee1e537a5b9229ebe9310a260 222433 librg-utils-perl_1.0.43.orig.tar.gz 550c94bebd8286bf56d67ab3409b1a31560b63aeb8a1bf46d2ca05a42b9c0926 4512 librg-utils-perl_1.0.43-9.debian.tar.xz Files: 72955ad3760af32cac8061c198cfff96 222433 librg-utils-perl_1.0.43.orig.tar.gz 55094e21677f3e4eb2f4954bee9f7c8f 4512 librg-utils-perl_1.0.43-9.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCgAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAmdi+DARHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtF1vQ/8CTnmzK0lcFxqlVuCrsSFKBU96fVefyDI yP6HUkWulVHXDcSedz93j5KEN2Lg8Oyrr3I8pCuOKEpCx1O5xUXFqIfYk9nA6tyc HUiD/qT9TtzmBV9+Z8k+X0gjQlPBpI0xWdvDo3x28IeL0h1bwvfpqktJ/DspW2sh n3emo3EKUocOjeQKeeLXGmEZe6vz/eHqdMDtHXZQyvvA27Fe/I2hKNjBQX2eLnyF ef0Hq9F/7p7+fv8VK8/dPZzS+61WEGElsYMmCi5HKZaDQNPGK/qYvPOyN2VfpjSc okV6My+DE6GxDn2AyLllIKBh5CjyiDCCyGpliIbutp7pZcOIjaX0FiaZ5vt1uph1 Xsob9SH+LiMpmagv2Mp7K+W+keb3YTUvSPCbeuAz+3mpQiHPwFO9FMerhpnqemGW MIm6/kAeHA6kjIizC2xztKfsJtpaKG5VRHpEGNUdKTk3X6iKpHBnxmtcZi47MhPH tOjVrLC2njwef7jY4wzX/oUP73K8zD6trGicc/9TG4QPo2rk8m0ly/lmtUaCXp42 xvtIPD0yRgFICkR54/lcFxJ7qzEAkD46l54M0bdNzh3P1m75lFWyL2+M6zePhrGj s1JL/wq+rKb9Wnx/Zlq0a6X3UCBiv/ysLSo6Cmwh9VvtSviRpo66Zo3aMlz/7vv9 gkfu56cqK4g= =FC9q -----END PGP SIGNATURE----- Fri Feb 7 05:26:40 UTC 2025 I: Checking whether the package is not for us Fri Feb 7 05:26:40 UTC 2025 I: Starting 1st build on remote node codethink03-arm64.debian.net. Fri Feb 7 05:26:40 UTC 2025 I: Preparing to do remote build '1' on codethink03-arm64.debian.net. Fri Feb 7 05:27:18 UTC 2025 I: Deleting $TMPDIR on codethink03-arm64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Wed Mar 11 23:49:43 -12 2026 I: pbuilder-time-stamp: 1773316183 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [librg-utils-perl_1.0.43-9.dsc] I: copying [./librg-utils-perl_1.0.43.orig.tar.gz] I: copying [./librg-utils-perl_1.0.43-9.debian.tar.xz] I: Extracting source dpkg-source: warning: cannot verify inline signature for ./librg-utils-perl_1.0.43-9.dsc: unsupported subcommand dpkg-source: info: extracting librg-utils-perl in librg-utils-perl-1.0.43 dpkg-source: info: unpacking librg-utils-perl_1.0.43.orig.tar.gz dpkg-source: info: unpacking librg-utils-perl_1.0.43-9.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying remove-defined-for-arrays.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/3040815/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='arm64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' DISTRIBUTION='trixie' HOME='/root' HOST_ARCH='arm64' IFS=' ' INVOCATION_ID='a9cd2572403d4bbcb791f629f6dbf60a' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='3040815' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.j2gKiAvD/pbuilderrc_wHNS --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.j2gKiAvD/b1 --logfile b1/build.log librg-utils-perl_1.0.43-9.dsc' SUDO_GID='109' SUDO_UID='104' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://192.168.101.4:3128' I: uname -a Linux codethink03-arm64 6.1.0-30-cloud-arm64 #1 SMP Debian 6.1.124-1 (2025-01-12) aarch64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Nov 22 2024 /bin -> usr/bin I: user script /srv/workspace/pbuilder/3040815/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: arm64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), perl, libmodule-build-perl, debhelper dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19956 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on libmodule-build-perl; however: Package libmodule-build-perl is not installed. pbuilder-satisfydepends-dummy depends on debhelper; however: Package debhelper is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libdebhelper-perl{a} libelf1t64{a} libfile-stripnondeterminism-perl{a} libicu72{a} libmagic-mgc{a} libmagic1t64{a} libmodule-build-perl{a} libpipeline1{a} libtool{a} libuchardet0{a} libunistring5{a} libxml2{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl libmodule-signature-perl libpod-readme-perl libsoftware-license-perl lynx wget 0 packages upgraded, 31 newly installed, 0 to remove and 0 not upgraded. Need to get 20.4 MB of archives. After unpacking 80.8 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main arm64 sensible-utils all 0.0.24 [24.8 kB] Get: 2 http://deb.debian.org/debian trixie/main arm64 libmagic-mgc arm64 1:5.45-3+b1 [314 kB] Get: 3 http://deb.debian.org/debian trixie/main arm64 libmagic1t64 arm64 1:5.45-3+b1 [102 kB] Get: 4 http://deb.debian.org/debian trixie/main arm64 file arm64 1:5.45-3+b1 [43.4 kB] Get: 5 http://deb.debian.org/debian trixie/main arm64 gettext-base arm64 0.23.1-1 [241 kB] Get: 6 http://deb.debian.org/debian trixie/main arm64 libuchardet0 arm64 0.0.8-1+b2 [69.2 kB] Get: 7 http://deb.debian.org/debian trixie/main arm64 groff-base arm64 1.23.0-7 [1129 kB] Get: 8 http://deb.debian.org/debian trixie/main arm64 bsdextrautils arm64 2.40.4-2 [91.5 kB] Get: 9 http://deb.debian.org/debian trixie/main arm64 libpipeline1 arm64 1.5.8-1 [40.2 kB] Get: 10 http://deb.debian.org/debian trixie/main arm64 man-db arm64 2.13.0-1 [1404 kB] Get: 11 http://deb.debian.org/debian trixie/main arm64 m4 arm64 1.4.19-5 [284 kB] Get: 12 http://deb.debian.org/debian trixie/main arm64 autoconf all 2.72-3 [493 kB] Get: 13 http://deb.debian.org/debian trixie/main arm64 autotools-dev all 20220109.1 [51.6 kB] Get: 14 http://deb.debian.org/debian trixie/main arm64 automake all 1:1.17-3 [862 kB] Get: 15 http://deb.debian.org/debian trixie/main arm64 autopoint all 0.23.1-1 [770 kB] Get: 16 http://deb.debian.org/debian trixie/main arm64 libdebhelper-perl all 13.24.1 [90.9 kB] Get: 17 http://deb.debian.org/debian trixie/main arm64 libtool all 2.5.4-3 [539 kB] Get: 18 http://deb.debian.org/debian trixie/main arm64 dh-autoreconf all 20 [17.1 kB] Get: 19 http://deb.debian.org/debian trixie/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 20 http://deb.debian.org/debian trixie/main arm64 libfile-stripnondeterminism-perl all 1.14.1-1 [19.6 kB] Get: 21 http://deb.debian.org/debian trixie/main arm64 dh-strip-nondeterminism all 1.14.1-1 [8584 B] Get: 22 http://deb.debian.org/debian trixie/main arm64 libelf1t64 arm64 0.192-4 [189 kB] Get: 23 http://deb.debian.org/debian trixie/main arm64 dwz arm64 0.15-1+b1 [102 kB] Get: 24 http://deb.debian.org/debian trixie/main arm64 libunistring5 arm64 1.3-1 [449 kB] Get: 25 http://deb.debian.org/debian trixie/main arm64 libicu72 arm64 72.1-6 [9239 kB] Get: 26 http://deb.debian.org/debian trixie/main arm64 libxml2 arm64 2.12.7+dfsg+really2.9.14-0.2+b1 [630 kB] Get: 27 http://deb.debian.org/debian trixie/main arm64 gettext arm64 0.23.1-1 [1610 kB] Get: 28 http://deb.debian.org/debian trixie/main arm64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 29 http://deb.debian.org/debian trixie/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 30 http://deb.debian.org/debian trixie/main arm64 debhelper all 13.24.1 [920 kB] Get: 31 http://deb.debian.org/debian trixie/main arm64 libmodule-build-perl all 0.423400-2 [252 kB] Fetched 20.4 MB in 0s (154 MB/s) Preconfiguring packages ... Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19956 files and directories currently installed.) Preparing to unpack .../00-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../01-libmagic-mgc_1%3a5.45-3+b1_arm64.deb ... Unpacking libmagic-mgc (1:5.45-3+b1) ... Selecting previously unselected package libmagic1t64:arm64. Preparing to unpack .../02-libmagic1t64_1%3a5.45-3+b1_arm64.deb ... Unpacking libmagic1t64:arm64 (1:5.45-3+b1) ... Selecting previously unselected package file. Preparing to unpack .../03-file_1%3a5.45-3+b1_arm64.deb ... Unpacking file (1:5.45-3+b1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../04-gettext-base_0.23.1-1_arm64.deb ... Unpacking gettext-base (0.23.1-1) ... Selecting previously unselected package libuchardet0:arm64. Preparing to unpack .../05-libuchardet0_0.0.8-1+b2_arm64.deb ... Unpacking libuchardet0:arm64 (0.0.8-1+b2) ... Selecting previously unselected package groff-base. Preparing to unpack .../06-groff-base_1.23.0-7_arm64.deb ... Unpacking groff-base (1.23.0-7) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../07-bsdextrautils_2.40.4-2_arm64.deb ... Unpacking bsdextrautils (2.40.4-2) ... Selecting previously unselected package libpipeline1:arm64. Preparing to unpack .../08-libpipeline1_1.5.8-1_arm64.deb ... Unpacking libpipeline1:arm64 (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../09-man-db_2.13.0-1_arm64.deb ... Unpacking man-db (2.13.0-1) ... Selecting previously unselected package m4. Preparing to unpack .../10-m4_1.4.19-5_arm64.deb ... Unpacking m4 (1.4.19-5) ... Selecting previously unselected package autoconf. Preparing to unpack .../11-autoconf_2.72-3_all.deb ... Unpacking autoconf (2.72-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../12-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../13-automake_1%3a1.17-3_all.deb ... Unpacking automake (1:1.17-3) ... Selecting previously unselected package autopoint. Preparing to unpack .../14-autopoint_0.23.1-1_all.deb ... Unpacking autopoint (0.23.1-1) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../15-libdebhelper-perl_13.24.1_all.deb ... Unpacking libdebhelper-perl (13.24.1) ... Selecting previously unselected package libtool. Preparing to unpack .../16-libtool_2.5.4-3_all.deb ... Unpacking libtool (2.5.4-3) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../17-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../18-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../19-libfile-stripnondeterminism-perl_1.14.1-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.14.1-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../20-dh-strip-nondeterminism_1.14.1-1_all.deb ... Unpacking dh-strip-nondeterminism (1.14.1-1) ... Selecting previously unselected package libelf1t64:arm64. Preparing to unpack .../21-libelf1t64_0.192-4_arm64.deb ... Unpacking libelf1t64:arm64 (0.192-4) ... Selecting previously unselected package dwz. Preparing to unpack .../22-dwz_0.15-1+b1_arm64.deb ... Unpacking dwz (0.15-1+b1) ... Selecting previously unselected package libunistring5:arm64. Preparing to unpack .../23-libunistring5_1.3-1_arm64.deb ... Unpacking libunistring5:arm64 (1.3-1) ... Selecting previously unselected package libicu72:arm64. Preparing to unpack .../24-libicu72_72.1-6_arm64.deb ... Unpacking libicu72:arm64 (72.1-6) ... Selecting previously unselected package libxml2:arm64. Preparing to unpack .../25-libxml2_2.12.7+dfsg+really2.9.14-0.2+b1_arm64.deb ... Unpacking libxml2:arm64 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Selecting previously unselected package gettext. Preparing to unpack .../26-gettext_0.23.1-1_arm64.deb ... Unpacking gettext (0.23.1-1) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../27-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../28-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../29-debhelper_13.24.1_all.deb ... Unpacking debhelper (13.24.1) ... Selecting previously unselected package libmodule-build-perl. Preparing to unpack .../30-libmodule-build-perl_0.423400-2_all.deb ... Adding 'diversion of /usr/bin/config_data to /usr/bin/config_data.diverted by libmodule-build-perl' Adding 'diversion of /usr/share/man/man1/config_data.1.gz to /usr/share/man/man1/config_data.diverted.1.gz by libmodule-build-perl' Unpacking libmodule-build-perl (0.423400-2) ... Setting up libpipeline1:arm64 (1.5.8-1) ... Setting up libicu72:arm64 (72.1-6) ... Setting up bsdextrautils (2.40.4-2) ... Setting up libmagic-mgc (1:5.45-3+b1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.24.1) ... Setting up libmagic1t64:arm64 (1:5.45-3+b1) ... Setting up gettext-base (0.23.1-1) ... Setting up m4 (1.4.19-5) ... Setting up file (1:5.45-3+b1) ... Setting up libelf1t64:arm64 (0.192-4) ... Setting up libmodule-build-perl (0.423400-2) ... Setting up autotools-dev (20220109.1) ... Setting up libunistring5:arm64 (1.3-1) ... Setting up autopoint (0.23.1-1) ... Setting up autoconf (2.72-3) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.24) ... Setting up libuchardet0:arm64 (0.0.8-1+b2) ... Setting up libxml2:arm64 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Setting up automake (1:1.17-3) ... update-alternatives: using /usr/bin/automake-1.17 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.1-1) ... Setting up gettext (0.23.1-1) ... Setting up libtool (2.5.4-3) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up dh-strip-nondeterminism (1.14.1-1) ... Setting up groff-base (1.23.0-7) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up debhelper (13.24.1) ... Processing triggers for libc-bin (2.40-6) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/librg-utils-perl-1.0.43/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../librg-utils-perl_1.0.43-9_source.changes dpkg-buildpackage: info: source package librg-utils-perl dpkg-buildpackage: info: source version 1.0.43-9 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 debian/rules clean dh clean debian/rules override_dh_auto_clean make[1]: Entering directory '/build/reproducible-path/librg-utils-perl-1.0.43' rm -rf autom4te.cache blib Build dh_auto_clean if [ -f Makefile ] ; then make distclean ; fi if [ -f Makefile.in.bak ] ; then mv Makefile.in.bak Makefile.in ; fi if [ -f configure.bak ] ; then mv configure.bak configure ; fi make[1]: Leaving directory '/build/reproducible-path/librg-utils-perl-1.0.43' dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf Makefile.am:27: warning: '%'-style pattern rules are a GNU make extension debian/rules override_dh_auto_configure make[1]: Entering directory '/build/reproducible-path/librg-utils-perl-1.0.43' cp -a Makefile.in Makefile.in.bak cp -a configure configure.bak dh_auto_configure ./configure --build=aarch64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/aarch64-linux-gnu --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking checking for a BSD-compatible install... /usr/bin/install -c checking whether sleep supports fractional seconds... yes checking filesystem timestamp resolution... 0.01 checking whether build environment is sane... yes checking for a race-free mkdir -p... /usr/bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking xargs -n works... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating Build.PL config.status: creating librg-utils-perl.spec config.status: creating lib/Makefile config.status: creating lib/RG/Makefile config.status: creating lib/RG/Utils/Makefile config.status: creating mat/Makefile make[1]: Leaving directory '/build/reproducible-path/librg-utils-perl-1.0.43' dh_auto_build make -j12 make[1]: Entering directory '/build/reproducible-path/librg-utils-perl-1.0.43' Making all in lib make[2]: Entering directory '/build/reproducible-path/librg-utils-perl-1.0.43/lib' Making all in RG make[3]: Entering directory '/build/reproducible-path/librg-utils-perl-1.0.43/lib/RG' Making all in Utils make[4]: Entering directory '/build/reproducible-path/librg-utils-perl-1.0.43/lib/RG/Utils' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/build/reproducible-path/librg-utils-perl-1.0.43/lib/RG/Utils' make[4]: Entering directory '/build/reproducible-path/librg-utils-perl-1.0.43/lib/RG' make[4]: Nothing to be done for 'all-am'. make[4]: Leaving directory '/build/reproducible-path/librg-utils-perl-1.0.43/lib/RG' make[3]: Leaving directory '/build/reproducible-path/librg-utils-perl-1.0.43/lib/RG' make[3]: Entering directory '/build/reproducible-path/librg-utils-perl-1.0.43/lib' make[3]: Nothing to be done for 'all-am'. make[3]: Leaving directory '/build/reproducible-path/librg-utils-perl-1.0.43/lib' make[2]: Leaving directory '/build/reproducible-path/librg-utils-perl-1.0.43/lib' Making all in mat make[2]: Entering directory '/build/reproducible-path/librg-utils-perl-1.0.43/mat' make[2]: Nothing to be done for 'all'. make[2]: Leaving directory '/build/reproducible-path/librg-utils-perl-1.0.43/mat' make[2]: Entering directory '/build/reproducible-path/librg-utils-perl-1.0.43' sed -e 's|__pkgdatadir__|/usr/share/librg-utils-perl|g;s|__sysconfdir__|/etc|g;s|__bindir__|/usr/bin|g;s|__VERSION__|1.0.43|g' "dbSwiss" | \ pod2man -c 'User Commands' -r "1.0.43" -name DBSWISS > "dbSwiss.1" perl Build.PL installdirs=vendor && perl Build manifest && perl Build && touch build-stamp Can't find dist packages without a MANIFEST file Run 'Build manifest' to generate one WARNING: Possible missing or corrupt 'MANIFEST' file. Nothing to enter for 'provides' field in metafile. Created MYMETA.yml and MYMETA.json Creating new 'Build' script for 'librg-utils-perl' version '1.0.43' File 'MANIFEST.SKIP' does not exist: Creating a temporary 'MANIFEST.SKIP' Added to MANIFEST: .pc/.quilt_patches Added to MANIFEST: .pc/.quilt_series Added to MANIFEST: .pc/.version Added to MANIFEST: .pc/applied-patches Added to MANIFEST: .pc/remove-defined-for-arrays.patch/lib/RG/Utils/Conv_hssp2saf.pm Added to MANIFEST: .pc/remove-defined-for-arrays.patch/lib/RG/Utils/Copf.pm Added to MANIFEST: .pc/remove-defined-for-arrays.patch/lib/RG/Utils/Hssp_filter.pm Added to MANIFEST: aclocal.m4 Added to MANIFEST: AUTHORS Added to MANIFEST: autom4te.cache/output.0 Added to MANIFEST: autom4te.cache/output.1 Added to MANIFEST: autom4te.cache/output.2 Added to MANIFEST: autom4te.cache/requests Added to MANIFEST: autom4te.cache/traces.0 Added to MANIFEST: autom4te.cache/traces.1 Added to MANIFEST: autom4te.cache/traces.2 Added to MANIFEST: blast2saf.pl Added to MANIFEST: blastpgp_to_saf.pl Added to MANIFEST: Build.PL Added to MANIFEST: Build.PL.in Added to MANIFEST: ChangeLog Added to MANIFEST: config.log Added to MANIFEST: config.status Added to MANIFEST: configure Added to MANIFEST: configure.ac Added to MANIFEST: conv_hssp2saf.pl Added to MANIFEST: copf.pl Added to MANIFEST: COPYING Added to MANIFEST: dbSwiss Added to MANIFEST: dbSwiss.1 Added to MANIFEST: debian/autoreconf.after Added to MANIFEST: debian/autoreconf.before Added to MANIFEST: debian/changelog Added to MANIFEST: debian/clean Added to MANIFEST: debian/control Added to MANIFEST: debian/copyright Added to MANIFEST: debian/librg-utils-perl.debhelper.log Added to MANIFEST: debian/patches/remove-defined-for-arrays.patch Added to MANIFEST: debian/patches/series Added to MANIFEST: debian/README.Debian Added to MANIFEST: debian/rules Added to MANIFEST: debian/salsa-ci.yml Added to MANIFEST: debian/source/format Added to MANIFEST: debian/upstream/metadata Added to MANIFEST: debian/watch Added to MANIFEST: hssp_filter.pl Added to MANIFEST: INSTALL Added to MANIFEST: install-sh Added to MANIFEST: lib/Makefile.am Added to MANIFEST: lib/Makefile.in Added to MANIFEST: lib/RG/Makefile.am Added to MANIFEST: lib/RG/Makefile.in Added to MANIFEST: lib/RG/Utils/Conv_hssp2saf.pm Added to MANIFEST: lib/RG/Utils/Copf.pm Added to MANIFEST: lib/RG/Utils/Hssp_filter.pm Added to MANIFEST: lib/RG/Utils/Makefile.am Added to MANIFEST: lib/RG/Utils/Makefile.in Added to MANIFEST: librg-utils-perl.spec Added to MANIFEST: librg-utils-perl.spec.in Added to MANIFEST: Makefile.am Added to MANIFEST: Makefile.in Added to MANIFEST: MANIFEST Added to MANIFEST: mat/Blast_blosum62.metric Added to MANIFEST: mat/Makefile.am Added to MANIFEST: mat/Makefile.in Added to MANIFEST: mat/Maxhom_Blosum.metric Added to MANIFEST: mat/Maxhom_GCG.metric Added to MANIFEST: mat/Maxhom_McLachlan.metric Added to MANIFEST: mat/Maxhom_Sec_Struc.metric Added to MANIFEST: mat/Maxhom_Struc_IO.metric Added to MANIFEST: missing Added to MANIFEST: NEWS Added to MANIFEST: README Added to MANIFEST: safFilterRed.pl Building librg-utils-perl make[2]: Leaving directory '/build/reproducible-path/librg-utils-perl-1.0.43' make[1]: Leaving directory '/build/reproducible-path/librg-utils-perl-1.0.43' dh_auto_test make -j12 check "TESTSUITEFLAGS=-j12 --verbose" VERBOSE=1 make[1]: Entering directory '/build/reproducible-path/librg-utils-perl-1.0.43' Making check in lib make[2]: Entering directory '/build/reproducible-path/librg-utils-perl-1.0.43/lib' Making check in RG make[3]: Entering directory '/build/reproducible-path/librg-utils-perl-1.0.43/lib/RG' Making check in Utils make[4]: Entering directory '/build/reproducible-path/librg-utils-perl-1.0.43/lib/RG/Utils' make[4]: Nothing to be done for 'check'. make[4]: Leaving directory '/build/reproducible-path/librg-utils-perl-1.0.43/lib/RG/Utils' make[4]: Entering directory '/build/reproducible-path/librg-utils-perl-1.0.43/lib/RG' make[4]: Nothing to be done for 'check-am'. make[4]: Leaving directory '/build/reproducible-path/librg-utils-perl-1.0.43/lib/RG' make[3]: Leaving directory '/build/reproducible-path/librg-utils-perl-1.0.43/lib/RG' make[3]: Entering directory '/build/reproducible-path/librg-utils-perl-1.0.43/lib' make[3]: Nothing to be done for 'check-am'. make[3]: Leaving directory '/build/reproducible-path/librg-utils-perl-1.0.43/lib' make[2]: Leaving directory '/build/reproducible-path/librg-utils-perl-1.0.43/lib' Making check in mat make[2]: Entering directory '/build/reproducible-path/librg-utils-perl-1.0.43/mat' make[2]: Nothing to be done for 'check'. make[2]: Leaving directory '/build/reproducible-path/librg-utils-perl-1.0.43/mat' make[2]: Entering directory '/build/reproducible-path/librg-utils-perl-1.0.43' make[2]: Nothing to be done for 'check-am'. make[2]: Leaving directory '/build/reproducible-path/librg-utils-perl-1.0.43' make[1]: Leaving directory '/build/reproducible-path/librg-utils-perl-1.0.43' create-stamp debian/debhelper-build-stamp dh_prep debian/rules override_dh_auto_install make[1]: Entering directory '/build/reproducible-path/librg-utils-perl-1.0.43' /usr/bin/make DESTDIR=/build/reproducible-path/librg-utils-perl-1.0.43/debian/librg-utils-perl install make[2]: Entering directory '/build/reproducible-path/librg-utils-perl-1.0.43' Making install in lib make[3]: Entering directory '/build/reproducible-path/librg-utils-perl-1.0.43/lib' Making install in RG make[4]: Entering directory '/build/reproducible-path/librg-utils-perl-1.0.43/lib/RG' Making install in Utils make[5]: Entering directory '/build/reproducible-path/librg-utils-perl-1.0.43/lib/RG/Utils' make[6]: Entering directory '/build/reproducible-path/librg-utils-perl-1.0.43/lib/RG/Utils' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/build/reproducible-path/librg-utils-perl-1.0.43/lib/RG/Utils' make[5]: Leaving directory '/build/reproducible-path/librg-utils-perl-1.0.43/lib/RG/Utils' make[5]: Entering directory '/build/reproducible-path/librg-utils-perl-1.0.43/lib/RG' make[6]: Entering directory '/build/reproducible-path/librg-utils-perl-1.0.43/lib/RG' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/build/reproducible-path/librg-utils-perl-1.0.43/lib/RG' make[5]: Leaving directory '/build/reproducible-path/librg-utils-perl-1.0.43/lib/RG' make[4]: Leaving directory '/build/reproducible-path/librg-utils-perl-1.0.43/lib/RG' make[4]: Entering directory '/build/reproducible-path/librg-utils-perl-1.0.43/lib' make[5]: Entering directory '/build/reproducible-path/librg-utils-perl-1.0.43/lib' make[5]: Nothing to be done for 'install-exec-am'. make[5]: Nothing to be done for 'install-data-am'. make[5]: Leaving directory '/build/reproducible-path/librg-utils-perl-1.0.43/lib' make[4]: Leaving directory '/build/reproducible-path/librg-utils-perl-1.0.43/lib' make[3]: Leaving directory '/build/reproducible-path/librg-utils-perl-1.0.43/lib' Making install in mat make[3]: Entering directory '/build/reproducible-path/librg-utils-perl-1.0.43/mat' make[4]: Entering directory '/build/reproducible-path/librg-utils-perl-1.0.43/mat' make[4]: Nothing to be done for 'install-exec-am'. /usr/bin/mkdir -p '/build/reproducible-path/librg-utils-perl-1.0.43/debian/librg-utils-perl/usr/share/librg-utils-perl/mat' /usr/bin/install -c -m 644 ./Blast_blosum62.metric ./Maxhom_Blosum.metric ./Maxhom_GCG.metric ./Maxhom_McLachlan.metric ./Maxhom_Sec_Struc.metric ./Maxhom_Struc_IO.metric '/build/reproducible-path/librg-utils-perl-1.0.43/debian/librg-utils-perl/usr/share/librg-utils-perl/mat' make[4]: Leaving directory '/build/reproducible-path/librg-utils-perl-1.0.43/mat' make[3]: Leaving directory '/build/reproducible-path/librg-utils-perl-1.0.43/mat' make[3]: Entering directory '/build/reproducible-path/librg-utils-perl-1.0.43' make[4]: Entering directory '/build/reproducible-path/librg-utils-perl-1.0.43' make[4]: Nothing to be done for 'install-exec-am'. perl Build install destdir=/build/reproducible-path/librg-utils-perl-1.0.43/debian/librg-utils-perl create_packlist=0 Building librg-utils-perl Installing /build/reproducible-path/librg-utils-perl-1.0.43/debian/librg-utils-perl/usr/share/perl5/RG/Utils/Hssp_filter.pm Installing /build/reproducible-path/librg-utils-perl-1.0.43/debian/librg-utils-perl/usr/share/perl5/RG/Utils/Copf.pm Installing /build/reproducible-path/librg-utils-perl-1.0.43/debian/librg-utils-perl/usr/share/perl5/RG/Utils/Conv_hssp2saf.pm Installing /build/reproducible-path/librg-utils-perl-1.0.43/debian/librg-utils-perl/usr/share/man/man3/RG::Utils::Hssp_filter.3pm Installing /build/reproducible-path/librg-utils-perl-1.0.43/debian/librg-utils-perl/usr/share/man/man3/RG::Utils::Copf.3pm Installing /build/reproducible-path/librg-utils-perl-1.0.43/debian/librg-utils-perl/usr/share/man/man3/RG::Utils::Conv_hssp2saf.3pm /usr/bin/mkdir -p '/build/reproducible-path/librg-utils-perl-1.0.43/debian/librg-utils-perl/usr/share/librg-utils-perl' /usr/bin/install -c blast2saf.pl blastpgp_to_saf.pl conv_hssp2saf.pl copf.pl dbSwiss hssp_filter.pl safFilterRed.pl '/build/reproducible-path/librg-utils-perl-1.0.43/debian/librg-utils-perl/usr/share/librg-utils-perl' /usr/bin/mkdir -p '/build/reproducible-path/librg-utils-perl-1.0.43/debian/librg-utils-perl/usr/share/man/man1' /usr/bin/install -c -m 644 dbSwiss.1 '/build/reproducible-path/librg-utils-perl-1.0.43/debian/librg-utils-perl/usr/share/man/man1' /usr/bin/mkdir -p '/build/reproducible-path/librg-utils-perl-1.0.43/debian/librg-utils-perl/usr/share/man/man3' /usr/bin/make install-data-hook make[5]: Entering directory '/build/reproducible-path/librg-utils-perl-1.0.43' for f in "/build/reproducible-path/librg-utils-perl-1.0.43/debian/librg-utils-perl/usr/share/librg-utils-perl/copf.pl" "/build/reproducible-path/librg-utils-perl-1.0.43/debian/librg-utils-perl/usr/share/librg-utils-perl/hssp_filter.pl"; do \ sed -i -e 's|__bindir__|/usr/bin|g;s|__datadir__|/usr/share|g;s|__docdir__|/usr/share/doc/librg-utils-perl|g;s|__pkgdatadir__|/usr/share/librg-utils-perl|g;s|__PREFIX__|/usr|g;s|__sysconfdir__|/etc|g;s|__VERSION__|1.0.43|g;' "$f"; \ done make[5]: Leaving directory '/build/reproducible-path/librg-utils-perl-1.0.43' make[4]: Leaving directory '/build/reproducible-path/librg-utils-perl-1.0.43' make[3]: Leaving directory '/build/reproducible-path/librg-utils-perl-1.0.43' make[2]: Leaving directory '/build/reproducible-path/librg-utils-perl-1.0.43' make[1]: Leaving directory '/build/reproducible-path/librg-utils-perl-1.0.43' dh_installdocs dh_installchangelogs dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'librg-utils-perl' in '../librg-utils-perl_1.0.43-9_all.deb'. dpkg-genbuildinfo --build=binary -O../librg-utils-perl_1.0.43-9_arm64.buildinfo dpkg-genchanges --build=binary -O../librg-utils-perl_1.0.43-9_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/3040815 and its subdirectories I: Current time: Wed Mar 11 23:50:16 -12 2026 I: pbuilder-time-stamp: 1773316216 Fri Feb 7 05:27:18 UTC 2025 I: 1st build successful. Starting 2nd build on remote node codethink04-arm64.debian.net. Fri Feb 7 05:27:18 UTC 2025 I: Preparing to do remote build '2' on codethink04-arm64.debian.net. Fri Feb 7 05:27:57 UTC 2025 I: Deleting $TMPDIR on codethink04-arm64.debian.net. Fri Feb 7 05:27:58 UTC 2025 I: librg-utils-perl_1.0.43-9_arm64.changes: Format: 1.8 Date: Wed, 18 Dec 2024 17:26:28 +0100 Source: librg-utils-perl Binary: librg-utils-perl Architecture: all Version: 1.0.43-9 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: librg-utils-perl - parsers and format conversion utilities used by (e.g.) profphd Closes: 1045341 1049488 Changes: librg-utils-perl (1.0.43-9) unstable; urgency=medium . * Fix clean target Closes: #1045341, #1049488 * Standards-Version: 4.7.0 (routine-update) Checksums-Sha1: fb3528507858cc010483afaed7226a7740c9f953 107300 librg-utils-perl_1.0.43-9_all.deb 8f6843f662dd5897497d47266cb2aff7f2fa7bf3 4800 librg-utils-perl_1.0.43-9_arm64.buildinfo Checksums-Sha256: 332ae6acbc6e903a0b798359fa509b0ad8d09f24d101f144ad65a522c9e8aafe 107300 librg-utils-perl_1.0.43-9_all.deb 7660cdd30ae3adcbbf6f7d0b711ca7d7f7ee5ce4ee75d9b8f62834aad771c15e 4800 librg-utils-perl_1.0.43-9_arm64.buildinfo Files: b60cecd04fdb35bef3a1b000a612d4da 107300 perl optional librg-utils-perl_1.0.43-9_all.deb d0cfaa01e2770c7fe18c82f5eb33583c 4800 perl optional librg-utils-perl_1.0.43-9_arm64.buildinfo Fri Feb 7 05:27:59 UTC 2025 I: diffoscope 287 will be used to compare the two builds: Running as unit: rb-diffoscope-arm64_3-76611.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.j2gKiAvD/librg-utils-perl_1.0.43-9.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.j2gKiAvD/librg-utils-perl_1.0.43-9.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.j2gKiAvD/librg-utils-perl_1.0.43-9.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.j2gKiAvD/b1/librg-utils-perl_1.0.43-9_arm64.changes /srv/reproducible-results/rbuild-debian/r-b-build.j2gKiAvD/b2/librg-utils-perl_1.0.43-9_arm64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call diffoscope.comparators.binary.FilesystemFile ## main (total time: 0.003s) 0.003s 2 calls outputs 0.000s 1 call cleanup Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 226ms CPU time consumed: 226ms Fri Feb 7 05:28:02 UTC 2025 I: diffoscope 287 found no differences in the changes files, and a .buildinfo file also exists. Fri Feb 7 05:28:02 UTC 2025 I: librg-utils-perl from trixie built successfully and reproducibly on arm64. Fri Feb 7 05:28:03 UTC 2025 I: Submitting .buildinfo files to external archives: Fri Feb 7 05:28:03 UTC 2025 I: Submitting 8.0K b1/librg-utils-perl_1.0.43-9_arm64.buildinfo.asc Fri Feb 7 05:28:04 UTC 2025 I: Submitting 8.0K b2/librg-utils-perl_1.0.43-9_arm64.buildinfo.asc Fri Feb 7 05:28:05 UTC 2025 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Fri Feb 7 05:28:05 UTC 2025 I: Done submitting .buildinfo files. Fri Feb 7 05:28:05 UTC 2025 I: Removing signed librg-utils-perl_1.0.43-9_arm64.buildinfo.asc files: removed './b1/librg-utils-perl_1.0.43-9_arm64.buildinfo.asc' removed './b2/librg-utils-perl_1.0.43-9_arm64.buildinfo.asc'