Tue Apr 30 20:59:09 UTC 2024 I: starting to build libbio-db-embl-perl/trixie/arm64 on jenkins on '2024-04-30 20:58' Tue Apr 30 20:59:09 UTC 2024 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/arm64_14/38933/console.log Tue Apr 30 20:59:09 UTC 2024 I: Downloading source for trixie/libbio-db-embl-perl=1.7.4-4 --2024-04-30 20:59:09-- http://deb.debian.org/debian/pool/main/libb/libbio-db-embl-perl/libbio-db-embl-perl_1.7.4-4.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2243 (2.2K) [text/prs.lines.tag] Saving to: ‘libbio-db-embl-perl_1.7.4-4.dsc’ 0K .. 100% 193M=0s 2024-04-30 20:59:09 (193 MB/s) - ‘libbio-db-embl-perl_1.7.4-4.dsc’ saved [2243/2243] Tue Apr 30 20:59:09 UTC 2024 I: libbio-db-embl-perl_1.7.4-4.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: libbio-db-embl-perl Binary: libbio-db-embl-perl Architecture: all Version: 1.7.4-4 Maintainer: Debian Med Packaging Team Uploaders: Michael R. Crusoe Homepage: https://metacpan.org/release/Bio-DB-EMBL Standards-Version: 4.5.1 Vcs-Browser: https://salsa.debian.org/med-team/libbio-db-embl-perl Vcs-Git: https://salsa.debian.org/med-team/libbio-db-embl-perl.git Testsuite: autopkgtest Testsuite-Triggers: @builddeps@, pkg-perl-autopkgtest Build-Depends: debhelper-compat (= 13), libbio-perl-perl, libhttp-message-perl, libwww-perl, libtest-most-perl, libtest-requiresinternet-perl Build-Depends-Indep: perl Package-List: libbio-db-embl-perl deb perl optional arch=all Checksums-Sha1: f58f617a5d89a01871915eb2c7459b19019ecb31 13927 libbio-db-embl-perl_1.7.4.orig.tar.gz 68817783b5b1f19c004b2e197b45cbb1dae5511d 3252 libbio-db-embl-perl_1.7.4-4.debian.tar.xz Checksums-Sha256: fce080c4b3db7bcc529fd0cf0d29700d0b86ef8bbe7f77ad87f429a3ae7e1a27 13927 libbio-db-embl-perl_1.7.4.orig.tar.gz 16ac9a4400393ef7fc0b2dc1ffccf721b904b1a1b2c203af61cf7c56cbf5a25e 3252 libbio-db-embl-perl_1.7.4-4.debian.tar.xz Files: 15c53234d7708e130687ea5f66142241 13927 libbio-db-embl-perl_1.7.4.orig.tar.gz 67e25125e39622e94b460f1d273a17b9 3252 libbio-db-embl-perl_1.7.4-4.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQIzBAEBCgAdFiEEj5GyJ8fW8rGUjII2eTz2fo8NEdoFAmA1O0sACgkQeTz2fo8N EdovuQ//RzrNmV5LJyIMNS3c21p0bMD+OPPf2vEcexmhw7PssrIx0SdiN2jnQ+Q9 EKGVt1LUpe+LvTzlyzvoOs7jyiHz1JBLHwTKVc8u2H+WLXI94rtUMiBbQr4+hXKT W5Kjr6DFVraXI/tADErIpPDpidOx45rg4sP9juHA/RxApif5T0IkQKJV/AANDf6j pj3vC7Wic+4Obd2ZN3nsyyYZ4K0yKErdvKjW/G24q9t+LyoLm4bCzyHCAMd1+rQo KL+2ciWUk2qrgsaFe+J6EuU1zC2k/06v4218PZxWgN4cBVvgekdxcSvjVHgTW/FW fC9lHJPeEfv/7KMfuT6UPaL7HO7bfFM9ENqWswyu7YS/09jISWknYOfXOmEHHTIG M+6+2ByDaZyCwFnyFFvsgUS5KEyrAvvBjQshFKnEwPbAFkzBhtRUYzAinlXubSFe zWWXIEGi5G7nepQZS4zGX50XXiWGzo9+b5ykH1Cgq0UEjRcbHvkFmb0ind9uCMaC Wb0WTnsS+EH6jWZVhiliPWrkmMrr/yKZxq5gocxffqJOm4IXNa4KOgZJSwmp8I1t HPnj4r8tyHl2emvV3J+ur8wF7NMKjOyLGTyBhxgmrzh5Nhjq2l2BIjlSFePe9Yvu 0WtAW0/CN149eJDjuK5hCTcPbxZVRzXky5i/tIf40Fmij6N5Ub4= =Io65 -----END PGP SIGNATURE----- Tue Apr 30 20:59:09 UTC 2024 I: Checking whether the package is not for us Tue Apr 30 20:59:09 UTC 2024 I: Starting 1st build on remote node codethink01-arm64.debian.net. Tue Apr 30 20:59:09 UTC 2024 I: Preparing to do remote build '1' on codethink01-arm64.debian.net. Tue Apr 30 21:00:14 UTC 2024 I: Deleting $TMPDIR on codethink01-arm64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Mon Jun 2 15:22:11 -12 2025 I: pbuilder-time-stamp: 1748920931 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [libbio-db-embl-perl_1.7.4-4.dsc] I: copying [./libbio-db-embl-perl_1.7.4.orig.tar.gz] I: copying [./libbio-db-embl-perl_1.7.4-4.debian.tar.xz] I: Extracting source gpgv: Signature made Tue Feb 23 17:28:43 2021 gpgv: using RSA key 8F91B227C7D6F2B1948C8236793CF67E8F0D11DA gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./libbio-db-embl-perl_1.7.4-4.dsc: no acceptable signature found dpkg-source: info: extracting libbio-db-embl-perl in libbio-db-embl-perl-1.7.4 dpkg-source: info: unpacking libbio-db-embl-perl_1.7.4.orig.tar.gz dpkg-source: info: unpacking libbio-db-embl-perl_1.7.4-4.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying fix_test dpkg-source: info: applying ignore_failing_tests.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/1482297/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='arm64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' DISTRIBUTION='trixie' HOME='/root' HOST_ARCH='arm64' IFS=' ' INVOCATION_ID='135be723328946cd820d078f80871033' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='1482297' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.YxDOTxbp/pbuilderrc_EfF9 --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.YxDOTxbp/b1 --logfile b1/build.log libbio-db-embl-perl_1.7.4-4.dsc' SUDO_GID='109' SUDO_UID='104' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://192.168.101.4:3128' I: uname -a Linux codethink01-arm64 6.1.0-20-cloud-arm64 #1 SMP Debian 6.1.85-1 (2024-04-11) aarch64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 May 26 17:47 /bin -> usr/bin I: user script /srv/workspace/pbuilder/1482297/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: arm64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), libbio-perl-perl, libhttp-message-perl, libwww-perl, libtest-most-perl, libtest-requiresinternet-perl, perl dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19941 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on libbio-perl-perl; however: Package libbio-perl-perl is not installed. pbuilder-satisfydepends-dummy depends on libhttp-message-perl; however: Package libhttp-message-perl is not installed. pbuilder-satisfydepends-dummy depends on libwww-perl; however: Package libwww-perl is not installed. pbuilder-satisfydepends-dummy depends on libtest-most-perl; however: Package libtest-most-perl is not installed. pbuilder-satisfydepends-dummy depends on libtest-requiresinternet-perl; however: Package libtest-requiresinternet-perl is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libalgorithm-diff-perl{a} libarchive-zip-perl{a} libbio-perl-perl{a} libcapture-tiny-perl{a} libclass-data-inheritable-perl{a} libclone-perl{a} libdata-stag-perl{a} libdebhelper-perl{a} libdevel-stacktrace-perl{a} libelf1t64{a} libencode-locale-perl{a} libexception-class-perl{a} libfile-stripnondeterminism-perl{a} libhttp-date-perl{a} libhttp-message-perl{a} libicu72{a} libio-html-perl{a} libio-string-perl{a} liblwp-mediatypes-perl{a} libmagic-mgc{a} libmagic1t64{a} libpipeline1{a} libsub-override-perl{a} libsub-uplevel-perl{a} libtest-deep-perl{a} libtest-differences-perl{a} libtest-exception-perl{a} libtest-most-perl{a} libtest-requiresinternet-perl{a} libtest-warn-perl{a} libtext-diff-perl{a} libtimedate-perl{a} libtool{a} libuchardet0{a} liburi-perl{a} libxml2{a} m4{a} man-db{a} netbase{a} po-debconf{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: bioperl-run curl libace-perl libalgorithm-diff-xs-perl libalgorithm-munkres-perl libarchive-cpio-perl libarray-compare-perl libbio-asn1-entrezgene-perl libbio-perl-run-perl libconvert-binary-c-perl libdbd-mysql-perl libdbd-pg-perl libdbd-sqlite3-perl libgd-perl libgraph-perl libgraphviz-perl libhtml-parser-perl libhtml-tableextract-perl libio-compress-brotli-perl liblist-moreutils-perl libltdl-dev libmail-sendmail-perl libmldbm-perl libpostscript-perl libset-scalar-perl libsoap-lite-perl libsort-naturally-perl libspreadsheet-parseexcel-perl libspreadsheet-writeexcel-perl libsvg-graph-perl libsvg-perl libxml-dom-xpath-perl libxml-libxml-perl libxml-libxslt-perl libxml-parser-perl libxml-perl libxml-sax-perl libxml-sax-writer-perl libxml-simple-perl libxml-twig-perl libxml-writer-perl lynx perl-tk wget 0 packages upgraded, 55 newly installed, 0 to remove and 0 not upgraded. Need to get 22.3 MB of archives. After unpacking 87.2 MB will be used. The following packages have unmet dependencies: pbuilder-satisfydepends-dummy : Depends: libwww-perl but it is not installable The following actions will resolve these dependencies: Remove the following packages: 1) libssl3 [3.1.5-1 (now)] Install the following packages: 2) ca-certificates [20240203 (testing)] 3) libfile-listing-perl [6.16-1 (testing)] 4) libhtml-parser-perl [3.81-1+b1 (testing)] 5) libhtml-tagset-perl [3.24-1 (testing)] 6) libhtml-tree-perl [5.07-3 (testing)] 7) libhttp-cookies-perl [6.11-1 (testing)] 8) libhttp-negotiate-perl [6.01-2 (testing)] 9) libio-socket-ssl-perl [2.085-1 (testing)] 10) liblwp-protocol-https-perl [6.14-1 (testing)] 11) libnet-http-perl [6.23-1 (testing)] 12) libnet-ssleay-perl [1.94-1 (testing)] 13) libssl3t64 [3.2.1-3 (testing)] 14) libtry-tiny-perl [0.31-2 (testing)] 15) libwww-perl [6.77-1 (testing)] 16) libwww-robotrules-perl [6.02-1 (testing)] 17) openssl [3.2.1-3 (testing)] 18) perl-openssl-defaults [7+b2 (testing)] The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} ca-certificates{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libalgorithm-diff-perl{a} libarchive-zip-perl{a} libbio-perl-perl{a} libcapture-tiny-perl{a} libclass-data-inheritable-perl{a} libclone-perl{a} libdata-stag-perl{a} libdebhelper-perl{a} libdevel-stacktrace-perl{a} libelf1t64{a} libencode-locale-perl{a} libexception-class-perl{a} libfile-listing-perl{a} libfile-stripnondeterminism-perl{a} libhtml-parser-perl{a} libhtml-tagset-perl{a} libhtml-tree-perl{a} libhttp-cookies-perl{a} libhttp-date-perl{a} libhttp-message-perl{a} libhttp-negotiate-perl{a} libicu72{a} libio-html-perl{a} libio-socket-ssl-perl{a} libio-string-perl{a} liblwp-mediatypes-perl{a} liblwp-protocol-https-perl{a} libmagic-mgc{a} libmagic1t64{a} libnet-http-perl{a} libnet-ssleay-perl{a} libpipeline1{a} libssl3t64{a} libsub-override-perl{a} libsub-uplevel-perl{a} libtest-deep-perl{a} libtest-differences-perl{a} libtest-exception-perl{a} libtest-most-perl{a} libtest-requiresinternet-perl{a} libtest-warn-perl{a} libtext-diff-perl{a} libtimedate-perl{a} libtool{a} libtry-tiny-perl{a} libuchardet0{a} liburi-perl{a} libwww-perl{a} libwww-robotrules-perl{a} libxml2{a} m4{a} man-db{a} netbase{a} openssl{a} perl-openssl-defaults{a} po-debconf{a} sensible-utils{a} The following packages will be REMOVED: libssl3{a} The following packages are RECOMMENDED but will NOT be installed: bioperl-run curl libace-perl libalgorithm-diff-xs-perl libalgorithm-munkres-perl libarchive-cpio-perl libarray-compare-perl libbio-asn1-entrezgene-perl libbio-perl-run-perl libconvert-binary-c-perl libdata-dump-perl libdbd-mysql-perl libdbd-pg-perl libdbd-sqlite3-perl libgd-perl libgraph-perl libgraphviz-perl libhtml-form-perl libhtml-format-perl libhtml-tableextract-perl libhttp-daemon-perl libio-compress-brotli-perl liblist-moreutils-perl libltdl-dev libmail-sendmail-perl libmailtools-perl libmldbm-perl libpostscript-perl libset-scalar-perl libsoap-lite-perl libsort-naturally-perl libspreadsheet-parseexcel-perl libspreadsheet-writeexcel-perl libsvg-graph-perl libsvg-perl libxml-dom-xpath-perl libxml-libxml-perl libxml-libxslt-perl libxml-parser-perl libxml-perl libxml-sax-perl libxml-sax-writer-perl libxml-simple-perl libxml-twig-perl libxml-writer-perl lynx perl-tk wget 0 packages upgraded, 72 newly installed, 1 to remove and 0 not upgraded. Need to get 27.5 MB of archives. After unpacking 94.8 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main arm64 libssl3t64 arm64 3.2.1-3 [2537 kB] Get: 2 http://deb.debian.org/debian trixie/main arm64 netbase all 6.4 [12.8 kB] Get: 3 http://deb.debian.org/debian trixie/main arm64 sensible-utils all 0.0.22 [22.4 kB] Get: 4 http://deb.debian.org/debian trixie/main arm64 openssl arm64 3.2.1-3 [1324 kB] Get: 5 http://deb.debian.org/debian trixie/main arm64 ca-certificates all 20240203 [158 kB] Get: 6 http://deb.debian.org/debian trixie/main arm64 libmagic-mgc arm64 1:5.45-3 [314 kB] Get: 7 http://deb.debian.org/debian trixie/main arm64 libmagic1t64 arm64 1:5.45-3 [100 kB] Get: 8 http://deb.debian.org/debian trixie/main arm64 file arm64 1:5.45-3 [43.0 kB] Get: 9 http://deb.debian.org/debian trixie/main arm64 gettext-base arm64 0.21-14+b1 [160 kB] Get: 10 http://deb.debian.org/debian trixie/main arm64 libuchardet0 arm64 0.0.8-1+b1 [69.0 kB] Get: 11 http://deb.debian.org/debian trixie/main arm64 groff-base arm64 1.23.0-3+b1 [1126 kB] Get: 12 http://deb.debian.org/debian trixie/main arm64 bsdextrautils arm64 2.39.3-6 [90.0 kB] Get: 13 http://deb.debian.org/debian trixie/main arm64 libpipeline1 arm64 1.5.7-2 [36.5 kB] Get: 14 http://deb.debian.org/debian trixie/main arm64 man-db arm64 2.12.0-3 [1385 kB] Get: 15 http://deb.debian.org/debian trixie/main arm64 m4 arm64 1.4.19-4 [277 kB] Get: 16 http://deb.debian.org/debian trixie/main arm64 autoconf all 2.71-3 [332 kB] Get: 17 http://deb.debian.org/debian trixie/main arm64 autotools-dev all 20220109.1 [51.6 kB] Get: 18 http://deb.debian.org/debian trixie/main arm64 automake all 1:1.16.5-1.3 [823 kB] Get: 19 http://deb.debian.org/debian trixie/main arm64 autopoint all 0.21-14 [496 kB] Get: 20 http://deb.debian.org/debian trixie/main arm64 libdebhelper-perl all 13.15.3 [88.0 kB] Get: 21 http://deb.debian.org/debian trixie/main arm64 libtool all 2.4.7-7 [517 kB] Get: 22 http://deb.debian.org/debian trixie/main arm64 dh-autoreconf all 20 [17.1 kB] Get: 23 http://deb.debian.org/debian trixie/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 24 http://deb.debian.org/debian trixie/main arm64 libsub-override-perl all 0.10-1 [10.6 kB] Get: 25 http://deb.debian.org/debian trixie/main arm64 libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get: 26 http://deb.debian.org/debian trixie/main arm64 dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get: 27 http://deb.debian.org/debian trixie/main arm64 libelf1t64 arm64 0.191-1+b1 [187 kB] Get: 28 http://deb.debian.org/debian trixie/main arm64 dwz arm64 0.15-1+b1 [102 kB] Get: 29 http://deb.debian.org/debian trixie/main arm64 libicu72 arm64 72.1-4+b1 [9224 kB] Get: 30 http://deb.debian.org/debian trixie/main arm64 libxml2 arm64 2.9.14+dfsg-1.3+b3 [624 kB] Get: 31 http://deb.debian.org/debian trixie/main arm64 gettext arm64 0.21-14+b1 [1249 kB] Get: 32 http://deb.debian.org/debian trixie/main arm64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 33 http://deb.debian.org/debian trixie/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 34 http://deb.debian.org/debian trixie/main arm64 debhelper all 13.15.3 [901 kB] Get: 35 http://deb.debian.org/debian trixie/main arm64 libalgorithm-diff-perl all 1.201-1 [43.3 kB] Get: 36 http://deb.debian.org/debian trixie/main arm64 libio-string-perl all 1.08-4 [12.1 kB] Get: 37 http://deb.debian.org/debian trixie/main arm64 libdata-stag-perl all 0.14-3 [448 kB] Get: 38 http://deb.debian.org/debian trixie/main arm64 libbio-perl-perl all 1.7.8-1 [2603 kB] Get: 39 http://deb.debian.org/debian trixie/main arm64 libcapture-tiny-perl all 0.48-2 [24.6 kB] Get: 40 http://deb.debian.org/debian trixie/main arm64 libclass-data-inheritable-perl all 0.08-3 [8588 B] Get: 41 http://deb.debian.org/debian trixie/main arm64 libclone-perl arm64 0.46-1+b1 [13.6 kB] Get: 42 http://deb.debian.org/debian trixie/main arm64 libdevel-stacktrace-perl all 2.0500-1 [26.4 kB] Get: 43 http://deb.debian.org/debian trixie/main arm64 libencode-locale-perl all 1.05-3 [12.9 kB] Get: 44 http://deb.debian.org/debian trixie/main arm64 libexception-class-perl all 1.45-1 [34.6 kB] Get: 45 http://deb.debian.org/debian trixie/main arm64 libtimedate-perl all 2.3300-2 [39.3 kB] Get: 46 http://deb.debian.org/debian trixie/main arm64 libhttp-date-perl all 6.06-1 [10.7 kB] Get: 47 http://deb.debian.org/debian trixie/main arm64 libfile-listing-perl all 6.16-1 [12.4 kB] Get: 48 http://deb.debian.org/debian trixie/main arm64 libhtml-tagset-perl all 3.24-1 [14.7 kB] Get: 49 http://deb.debian.org/debian trixie/main arm64 liburi-perl all 5.28-1 [98.6 kB] Get: 50 http://deb.debian.org/debian trixie/main arm64 libhtml-parser-perl arm64 3.81-1+b1 [97.1 kB] Get: 51 http://deb.debian.org/debian trixie/main arm64 libhtml-tree-perl all 5.07-3 [211 kB] Get: 52 http://deb.debian.org/debian trixie/main arm64 libio-html-perl all 1.004-3 [16.2 kB] Get: 53 http://deb.debian.org/debian trixie/main arm64 liblwp-mediatypes-perl all 6.04-2 [20.2 kB] Get: 54 http://deb.debian.org/debian trixie/main arm64 libhttp-message-perl all 6.45-1 [82.0 kB] Get: 55 http://deb.debian.org/debian trixie/main arm64 libhttp-cookies-perl all 6.11-1 [19.1 kB] Get: 56 http://deb.debian.org/debian trixie/main arm64 libhttp-negotiate-perl all 6.01-2 [13.1 kB] Get: 57 http://deb.debian.org/debian trixie/main arm64 perl-openssl-defaults arm64 7+b2 [6712 B] Get: 58 http://deb.debian.org/debian trixie/main arm64 libnet-ssleay-perl arm64 1.94-1 [327 kB] Get: 59 http://deb.debian.org/debian trixie/main arm64 libio-socket-ssl-perl all 2.085-1 [218 kB] Get: 60 http://deb.debian.org/debian trixie/main arm64 libnet-http-perl all 6.23-1 [23.9 kB] Get: 61 http://deb.debian.org/debian trixie/main arm64 libtry-tiny-perl all 0.31-2 [22.6 kB] Get: 62 http://deb.debian.org/debian trixie/main arm64 libwww-robotrules-perl all 6.02-1 [12.9 kB] Get: 63 http://deb.debian.org/debian trixie/main arm64 libwww-perl all 6.77-1 [183 kB] Get: 64 http://deb.debian.org/debian trixie/main arm64 liblwp-protocol-https-perl all 6.14-1 [10.8 kB] Get: 65 http://deb.debian.org/debian trixie/main arm64 libsub-uplevel-perl all 0.2800-3 [14.0 kB] Get: 66 http://deb.debian.org/debian trixie/main arm64 libtest-deep-perl all 1.204-1 [52.9 kB] Get: 67 http://deb.debian.org/debian trixie/main arm64 libtext-diff-perl all 1.45-2 [27.2 kB] Get: 68 http://deb.debian.org/debian trixie/main arm64 libtest-differences-perl all 0.71-1 [17.9 kB] Get: 69 http://deb.debian.org/debian trixie/main arm64 libtest-exception-perl all 0.43-3 [16.9 kB] Get: 70 http://deb.debian.org/debian trixie/main arm64 libtest-warn-perl all 0.37-2 [14.5 kB] Get: 71 http://deb.debian.org/debian trixie/main arm64 libtest-most-perl all 0.38-1 [25.1 kB] Get: 72 http://deb.debian.org/debian trixie/main arm64 libtest-requiresinternet-perl all 0.05-4 [6864 B] Fetched 27.5 MB in 0s (81.1 MB/s) debconf: delaying package configuration, since apt-utils is not installed dpkg: libssl3:arm64: dependency problems, but removing anyway as you requested: libkrb5-3:arm64 depends on libssl3 (>= 3.0.0). coreutils depends on libssl3 (>= 3.0.0). (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19941 files and directories currently installed.) Removing libssl3:arm64 (3.1.5-1) ... Selecting previously unselected package libssl3t64:arm64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19928 files and directories currently installed.) Preparing to unpack .../libssl3t64_3.2.1-3_arm64.deb ... Unpacking libssl3t64:arm64 (3.2.1-3) ... Setting up libssl3t64:arm64 (3.2.1-3) ... Selecting previously unselected package netbase. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19943 files and directories currently installed.) Preparing to unpack .../00-netbase_6.4_all.deb ... Unpacking netbase (6.4) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../01-sensible-utils_0.0.22_all.deb ... Unpacking sensible-utils (0.0.22) ... Selecting previously unselected package openssl. Preparing to unpack .../02-openssl_3.2.1-3_arm64.deb ... Unpacking openssl (3.2.1-3) ... 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Setting up libhtml-tagset-perl (3.24-1) ... Setting up libdebhelper-perl (13.15.3) ... Setting up liblwp-mediatypes-perl (6.04-2) ... Setting up libmagic1t64:arm64 (1:5.45-3) ... Setting up libtry-tiny-perl (0.31-2) ... Setting up perl-openssl-defaults:arm64 (7+b2) ... Setting up gettext-base (0.21-14+b1) ... Setting up m4 (1.4.19-4) ... Setting up libencode-locale-perl (1.05-3) ... Setting up file (1:5.45-3) ... Setting up libelf1t64:arm64 (0.191-1+b1) ... Setting up libio-string-perl (1.08-4) ... Setting up autotools-dev (20220109.1) ... Setting up libclass-data-inheritable-perl (0.08-3) ... Setting up libtext-diff-perl (1.45-2) ... Setting up libio-html-perl (1.004-3) ... Setting up autopoint (0.21-14) ... Setting up autoconf (2.71-3) ... Setting up libcapture-tiny-perl (0.48-2) ... Setting up libtimedate-perl (2.3300-2) ... Setting up dwz (0.15-1+b1) ... Setting up libdata-stag-perl (0.14-3) ... Setting up sensible-utils (0.0.22) ... Setting up libuchardet0:arm64 (0.0.8-1+b1) ... Setting up libsub-uplevel-perl (0.2800-3) ... Setting up libsub-override-perl (0.10-1) ... Setting up netbase (6.4) ... Setting up libdevel-stacktrace-perl (2.0500-1) ... Setting up libbio-perl-perl (1.7.8-1) ... Setting up openssl (3.2.1-3) ... Setting up libxml2:arm64 (2.9.14+dfsg-1.3+b3) ... Setting up liburi-perl (5.28-1) ... Setting up libnet-ssleay-perl:arm64 (1.94-1) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.13.1-1) ... Setting up libhttp-date-perl (6.06-1) ... Setting up gettext (0.21-14+b1) ... Setting up libfile-listing-perl (6.16-1) ... Setting up libtest-requiresinternet-perl (0.05-4) ... Setting up libtool (2.4.7-7) ... Setting up libtest-warn-perl (0.37-2) ... Setting up libtest-differences-perl (0.71-1) ... Setting up libnet-http-perl (6.23-1) ... Setting up libexception-class-perl (1.45-1) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 146 added, 0 removed; done. Setting up libtest-exception-perl (0.43-3) ... Setting up dh-strip-nondeterminism (1.13.1-1) ... Setting up libwww-robotrules-perl (6.02-1) ... Setting up groff-base (1.23.0-3+b1) ... Setting up libhtml-parser-perl:arm64 (3.81-1+b1) ... Setting up libio-socket-ssl-perl (2.085-1) ... Setting up libhttp-message-perl (6.45-1) ... Setting up libhttp-negotiate-perl (6.01-2) ... Setting up libhttp-cookies-perl (6.11-1) ... Setting up libtest-most-perl (0.38-1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libhtml-tree-perl (5.07-3) ... Setting up man-db (2.12.0-3) ... Not building database; man-db/auto-update is not 'true'. Setting up debhelper (13.15.3) ... Setting up liblwp-protocol-https-perl (6.14-1) ... Setting up libwww-perl (6.77-1) ... Processing triggers for libc-bin (2.37-18) ... Processing triggers for ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/libbio-db-embl-perl-1.7.4/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../libbio-db-embl-perl_1.7.4-4_source.changes dpkg-buildpackage: info: source package libbio-db-embl-perl dpkg-buildpackage: info: source version 1.7.4-4 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Étienne Mollier dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 debian/rules clean dh clean dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf dh_auto_configure /usr/bin/perl Makefile.PL INSTALLDIRS=vendor "OPTIMIZE=-g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libbio-db-embl-perl-1.7.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2" "LD=aarch64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libbio-db-embl-perl-1.7.4=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wl,-z,relro" Checking if your kit is complete... Looks good Generating a Unix-style Makefile Writing Makefile for Bio::DB::EMBL Writing MYMETA.yml and MYMETA.json dh_auto_build make -j12 make[1]: Entering directory '/build/reproducible-path/libbio-db-embl-perl-1.7.4' cp lib/Bio/DB/EMBL.pm blib/lib/Bio/DB/EMBL.pm Manifying 1 pod document make[1]: Leaving directory '/build/reproducible-path/libbio-db-embl-perl-1.7.4' dh_auto_test make -j12 test TEST_VERBOSE=1 make[1]: Entering directory '/build/reproducible-path/libbio-db-embl-perl-1.7.4' PERL_DL_NONLAZY=1 "/usr/bin/perl" "-MExtUtils::Command::MM" "-MTest::Harness" "-e" "undef *Test::Harness::Switches; test_harness(1, 'blib/lib', 'blib/arch')" t/*.t t/00-compile.t ........... 1..1 ok 1 - Bio/DB/EMBL.pm loaded ok ok t/author-mojibake.t ...... skipped: these tests are for testing by the author t/author-pod-coverage.t .. skipped: these tests are for testing by the author t/author-pod-syntax.t .... skipped: these tests are for testing by the author t/EMBL.t ................. skipped: NO_NETWORK_TESTING All tests successful. Files=5, Tests=1, 0 wallclock secs ( 0.04 usr 0.00 sys + 0.15 cusr 0.02 csys = 0.21 CPU) Result: PASS make[1]: Leaving directory '/build/reproducible-path/libbio-db-embl-perl-1.7.4' create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install --destdir=debian/libbio-db-embl-perl/ make -j12 install DESTDIR=/build/reproducible-path/libbio-db-embl-perl-1.7.4/debian/libbio-db-embl-perl AM_UPDATE_INFO_DIR=no PREFIX=/usr make[1]: Entering directory '/build/reproducible-path/libbio-db-embl-perl-1.7.4' Manifying 1 pod document Installing /build/reproducible-path/libbio-db-embl-perl-1.7.4/debian/libbio-db-embl-perl/usr/share/perl5/Bio/DB/EMBL.pm Installing /build/reproducible-path/libbio-db-embl-perl-1.7.4/debian/libbio-db-embl-perl/usr/share/man/man3/Bio::DB::EMBL.3pm make[1]: Leaving directory '/build/reproducible-path/libbio-db-embl-perl-1.7.4' dh_installdocs dh_installchangelogs dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'libbio-db-embl-perl' in '../libbio-db-embl-perl_1.7.4-4_all.deb'. dpkg-genbuildinfo --build=binary -O../libbio-db-embl-perl_1.7.4-4_arm64.buildinfo dpkg-genchanges --build=binary -O../libbio-db-embl-perl_1.7.4-4_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/1482297 and its subdirectories I: Current time: Mon Jun 2 15:23:13 -12 2025 I: pbuilder-time-stamp: 1748920993 Tue Apr 30 21:00:15 UTC 2024 I: 1st build successful. Starting 2nd build on remote node codethink03-arm64.debian.net. Tue Apr 30 21:00:15 UTC 2024 I: Preparing to do remote build '2' on codethink03-arm64.debian.net. Tue Apr 30 21:00:52 UTC 2024 I: Deleting $TMPDIR on codethink03-arm64.debian.net. Tue Apr 30 21:00:53 UTC 2024 I: libbio-db-embl-perl_1.7.4-4_arm64.changes: Format: 1.8 Date: Tue, 23 Feb 2021 18:22:06 +0100 Source: libbio-db-embl-perl Binary: libbio-db-embl-perl Architecture: all Version: 1.7.4-4 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Étienne Mollier Description: libbio-db-embl-perl - Database object interface for EMBL entry retrieval Closes: 978316 Changes: libbio-db-embl-perl (1.7.4-4) unstable; urgency=medium . * Team upload. * d/rules: make sure tests remain offline Closes: #978316 * explicit offline autodep8 perl autopkgtest; this is required to mark the smoke test as "superficial", since there are no offline tests done by this autopkgtest. Checksums-Sha1: 82c4763d7e0523d7baad24545745112e3afbd66d 7544 libbio-db-embl-perl_1.7.4-4_all.deb 7994a0d91493b858c8202cb61aeae1c55672629c 6235 libbio-db-embl-perl_1.7.4-4_arm64.buildinfo Checksums-Sha256: 11c01eed61ac305242533330e7ca84e8771359adf4af26b9ce21877b9b2e3b28 7544 libbio-db-embl-perl_1.7.4-4_all.deb 47d9757295f680455022c2f22622fed1645199c31f4b21d00c0b7e139ed7a8c4 6235 libbio-db-embl-perl_1.7.4-4_arm64.buildinfo Files: 0d58e157554a1d1671ebf4b2400c7ff8 7544 perl optional libbio-db-embl-perl_1.7.4-4_all.deb 52bf97ce176d3477873a6d55ff73b655 6235 perl optional libbio-db-embl-perl_1.7.4-4_arm64.buildinfo Tue Apr 30 21:00:54 UTC 2024 I: diffoscope 265 will be used to compare the two builds: Running as unit: rb-diffoscope-arm64_14-38933.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.YxDOTxbp/libbio-db-embl-perl_1.7.4-4.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.YxDOTxbp/libbio-db-embl-perl_1.7.4-4.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.YxDOTxbp/libbio-db-embl-perl_1.7.4-4.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.YxDOTxbp/b1/libbio-db-embl-perl_1.7.4-4_arm64.changes /srv/reproducible-results/rbuild-debian/r-b-build.YxDOTxbp/b2/libbio-db-embl-perl_1.7.4-4_arm64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.348s) 0.348s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.016s) 0.016s 12 calls diffoscope.comparators.binary.FilesystemFile ## specialize (total time: 0.000s) 0.000s 1 call specialize Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 693ms CPU time consumed: 694ms Tue Apr 30 21:00:55 UTC 2024 I: diffoscope 265 found no differences in the changes files, and a .buildinfo file also exists. Tue Apr 30 21:00:55 UTC 2024 I: libbio-db-embl-perl from trixie built successfully and reproducibly on arm64. Tue Apr 30 21:00:56 UTC 2024 I: Submitting .buildinfo files to external archives: Tue Apr 30 21:00:56 UTC 2024 I: Submitting 8.0K b1/libbio-db-embl-perl_1.7.4-4_arm64.buildinfo.asc Tue Apr 30 21:00:57 UTC 2024 I: Submitting 8.0K b2/libbio-db-embl-perl_1.7.4-4_arm64.buildinfo.asc Tue Apr 30 21:00:59 UTC 2024 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Tue Apr 30 21:00:59 UTC 2024 I: Done submitting .buildinfo files. Tue Apr 30 21:00:59 UTC 2024 I: Removing signed libbio-db-embl-perl_1.7.4-4_arm64.buildinfo.asc files: removed './b1/libbio-db-embl-perl_1.7.4-4_arm64.buildinfo.asc' removed './b2/libbio-db-embl-perl_1.7.4-4_arm64.buildinfo.asc'