Wed Oct 30 17:55:07 UTC 2024 I: starting to build dssp/trixie/arm64 on jenkins on '2024-10-30 17:54' Wed Oct 30 17:55:07 UTC 2024 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/arm64_2/59795/console.log Wed Oct 30 17:55:07 UTC 2024 I: Downloading source for trixie/dssp=4.4.10-1 --2024-10-30 17:55:08-- http://deb.debian.org/debian/pool/main/d/dssp/dssp_4.4.10-1.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2082 (2.0K) [text/prs.lines.tag] Saving to: ‘dssp_4.4.10-1.dsc’ 0K .. 100% 274M=0s 2024-10-30 17:55:08 (274 MB/s) - ‘dssp_4.4.10-1.dsc’ saved [2082/2082] Wed Oct 30 17:55:08 UTC 2024 I: dssp_4.4.10-1.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: dssp Binary: dssp Architecture: any Version: 4.4.10-1 Maintainer: Debian Med Packaging Team Uploaders: Maarten L. Hekkelman Homepage: https://github.com/PDB-REDO/dssp Standards-Version: 4.5.0 Vcs-Browser: https://salsa.debian.org/med-team/dssp Vcs-Git: https://salsa.debian.org/med-team/dssp.git Testsuite: autopkgtest Testsuite-Triggers: libcifpp-dev Build-Depends: debhelper-compat (= 13), cmake, mrc, libcifpp-dev (>= 5.0.7.1-1~), libboost-dev, libboost-regex-dev, zlib1g-dev, catch2, libmcfp-dev Package-List: dssp deb science optional arch=any Checksums-Sha1: 58d66af120b6a88df85931852fca320faeaabfd4 164259 dssp_4.4.10.orig.tar.gz 5c803a621915abb79432c78f35ffb4b1ae67b6dc 4492 dssp_4.4.10-1.debian.tar.xz Checksums-Sha256: b535d0410a79d612a2abea308d13d0ae2645bb925b13a86e5bb53c38b0fac723 164259 dssp_4.4.10.orig.tar.gz 27e6daad554e7456e1d778c5e0231ae432aa0cdcf76abd9f2375d0449a0c5360 4492 dssp_4.4.10-1.debian.tar.xz Files: 449f7b0b391e50ea2f123aebd1f4da40 164259 dssp_4.4.10.orig.tar.gz 2a755e9e243e4f6e5da8ad0a134853af 4492 dssp_4.4.10-1.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJKBAEBCgA0FiEEpytoJCJrtAfiS56AWHUD7Hrn7c4FAmcfYc0WHG1hYXJ0ZW5A aGVra2VsbWFuLmNvbQAKCRBYdQPseuftzm2UD/9sJATFqr7WNJh18wX2aAZ3XEfO /sqH3udq6QGqJWBd6F3jyj5RPnnoEJfA62xr4ONaNnO+AkOmVBnqk8s2veY0fG0Q 0BOp46s/rP5c9kVD959ZpVUaPxSZpKXODvI9iAYT4kEJH6F7jyBvpNqZLsbqAIjG MgzpOauXU/O51ebYAKPJR0BfKBBWVW9jxwCIO04coKzz2Og0OGS7EeBLz3BZzIOr zfGzfhLfJbPu6exDSFC+PYe0UQyUjwZ6k4FEui70Afo5Ke0uWebMNnPx6kXMasMX aWWHjAxdrNgU4fAcrjPshNDXH4fsqGAXvtf4X75tSdFlwJQH8gfwk2J47R4QkX/F ItD1mnQPeJ4Jn0HEapKoqgQ/x+TgmW+fYq50Ff1abTZVNtyDrx+bbzhpkR8ZD/CZ A4MrG2tXmVkh4coDasq0FfYIhqW5GO+DY3W+b+4+jX32FGDKSjFrild/chYcgSx6 jbo0Zt0sMq8MnCnweT97c1O2WT+PjMAxNLOnqC2cCSMr8cocvgd5gp9ZPn8zWQXp rCRIDfjoOeZ5tUI75mqfb+mqTKK51p+OQt6XlvKcK9YNtLhzuCP/Ef8B2xoRGEIX IyB2pdXTZGvotUb6mgy2LuHgfewrKk41HLlE6TiC23A8ZjGEeRW2OA2gKvO+FOPD 2EhiFBdSlIQQg1ANLQ== =Gid4 -----END PGP SIGNATURE----- Wed Oct 30 17:55:08 UTC 2024 I: Checking whether the package is not for us Wed Oct 30 17:55:08 UTC 2024 I: Starting 1st build on remote node codethink01-arm64.debian.net. Wed Oct 30 17:55:08 UTC 2024 I: Preparing to do remote build '1' on codethink01-arm64.debian.net. Wed Oct 30 18:11:43 UTC 2024 I: Deleting $TMPDIR on codethink01-arm64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Tue Dec 2 12:33:11 -12 2025 I: pbuilder-time-stamp: 1764721991 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [dssp_4.4.10-1.dsc] I: copying [./dssp_4.4.10.orig.tar.gz] I: copying [./dssp_4.4.10-1.debian.tar.xz] I: Extracting source gpgv: Signature made Mon Oct 28 10:05:01 2024 gpgv: using RSA key A72B6824226BB407E24B9E80587503EC7AE7EDCE gpgv: issuer "maarten@hekkelman.com" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./dssp_4.4.10-1.dsc: no acceptable signature found dpkg-source: info: extracting dssp in dssp-4.4.10 dpkg-source: info: unpacking dssp_4.4.10.orig.tar.gz dpkg-source: info: unpacking dssp_4.4.10-1.debian.tar.xz I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/3245150/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='arm64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' DISTRIBUTION='trixie' HOME='/root' HOST_ARCH='arm64' IFS=' ' INVOCATION_ID='40312e5053914258b565f9394fec2134' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='3245150' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.ASuSCsdJ/pbuilderrc_5iOz --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.ASuSCsdJ/b1 --logfile b1/build.log dssp_4.4.10-1.dsc' SUDO_GID='109' SUDO_UID='104' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://192.168.101.4:3128' I: uname -a Linux codethink01-arm64 6.1.0-26-cloud-arm64 #1 SMP Debian 6.1.112-1 (2024-09-30) aarch64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 4 2024 /bin -> usr/bin I: user script /srv/workspace/pbuilder/3245150/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: arm64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), cmake, mrc, libcifpp-dev (>= 5.0.7.1-1~), libboost-dev, libboost-regex-dev, zlib1g-dev, catch2, libmcfp-dev dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 20066 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on cmake; however: Package cmake is not installed. pbuilder-satisfydepends-dummy depends on mrc; however: Package mrc is not installed. pbuilder-satisfydepends-dummy depends on libcifpp-dev (>= 5.0.7.1-1~); however: Package libcifpp-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-dev; however: Package libboost-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-regex-dev; however: Package libboost-regex-dev is not installed. pbuilder-satisfydepends-dummy depends on zlib1g-dev; however: Package zlib1g-dev is not installed. pbuilder-satisfydepends-dummy depends on catch2; however: Package catch2 is not installed. pbuilder-satisfydepends-dummy depends on libmcfp-dev; however: Package libmcfp-dev is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} catch2{a} cmake{a} cmake-data{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} icu-devtools{a} intltool-debian{a} libarchive-zip-perl{a} libarchive13t64{a} libboost-dev{a} libboost-regex-dev{a} libboost-regex1.83-dev{a} libboost-regex1.83.0{a} libboost1.83-dev{a} libbrotli1{a} libcatch2-dev{a} libcifpp-data{a} libcifpp-dev{a} libcifpp7{a} libcom-err2{a} libcurl4t64{a} libdebhelper-perl{a} libelf1t64{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libgssapi-krb5-2{a} libicu-dev{a} libicu72{a} libjsoncpp26{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} libldap-2.5-0{a} libmagic-mgc{a} libmagic1t64{a} libmcfp-dev{a} libnghttp2-14{a} libpipeline1{a} libproc2-0{a} libpsl5t64{a} librhash1{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libssh2-1t64{a} libtool{a} libuchardet0{a} libuv1t64{a} libxml2{a} m4{a} man-db{a} mrc{a} po-debconf{a} procps{a} sensible-utils{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl krb5-locales libarchive-cpio-perl libldap-common libltdl-dev libmail-sendmail-perl libsasl2-modules linux-sysctl-defaults lynx psmisc publicsuffix wget 0 packages upgraded, 68 newly installed, 0 to remove and 0 not upgraded. Need to get 59.3 MB of archives. After unpacking 372 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main arm64 libproc2-0 arm64 2:4.0.4-6 [62.3 kB] Get: 2 http://deb.debian.org/debian trixie/main arm64 procps arm64 2:4.0.4-6 [872 kB] Get: 3 http://deb.debian.org/debian trixie/main arm64 sensible-utils all 0.0.24 [24.8 kB] Get: 4 http://deb.debian.org/debian trixie/main arm64 libmagic-mgc arm64 1:5.45-3 [314 kB] Get: 5 http://deb.debian.org/debian trixie/main arm64 libmagic1t64 arm64 1:5.45-3 [100 kB] Get: 6 http://deb.debian.org/debian trixie/main arm64 file arm64 1:5.45-3 [43.0 kB] Get: 7 http://deb.debian.org/debian trixie/main arm64 gettext-base arm64 0.22.5-2 [198 kB] Get: 8 http://deb.debian.org/debian trixie/main arm64 libuchardet0 arm64 0.0.8-1+b1 [69.0 kB] Get: 9 http://deb.debian.org/debian trixie/main arm64 groff-base arm64 1.23.0-5 [1129 kB] Get: 10 http://deb.debian.org/debian trixie/main arm64 bsdextrautils arm64 2.40.2-9 [96.6 kB] Get: 11 http://deb.debian.org/debian trixie/main arm64 libpipeline1 arm64 1.5.8-1 [40.2 kB] Get: 12 http://deb.debian.org/debian trixie/main arm64 man-db arm64 2.13.0-1 [1404 kB] Get: 13 http://deb.debian.org/debian trixie/main arm64 m4 arm64 1.4.19-4 [277 kB] Get: 14 http://deb.debian.org/debian trixie/main arm64 autoconf all 2.72-3 [493 kB] Get: 15 http://deb.debian.org/debian trixie/main arm64 autotools-dev all 20220109.1 [51.6 kB] Get: 16 http://deb.debian.org/debian trixie/main arm64 automake all 1:1.16.5-1.3 [823 kB] Get: 17 http://deb.debian.org/debian trixie/main arm64 autopoint all 0.22.5-2 [723 kB] Get: 18 http://deb.debian.org/debian trixie/main arm64 libcatch2-dev arm64 3.7.1-0.4 [588 kB] Get: 19 http://deb.debian.org/debian trixie/main arm64 catch2 all 3.7.1-0.4 [5052 B] Get: 20 http://deb.debian.org/debian trixie/main arm64 cmake-data all 3.30.5-1 [2223 kB] Get: 21 http://deb.debian.org/debian trixie/main arm64 libicu72 arm64 72.1-5+b1 [9239 kB] Get: 22 http://deb.debian.org/debian trixie/main arm64 libxml2 arm64 2.12.7+dfsg+really2.9.14-0.1 [630 kB] Get: 23 http://deb.debian.org/debian trixie/main arm64 libarchive13t64 arm64 3.7.4-1 [323 kB] Get: 24 http://deb.debian.org/debian trixie/main arm64 libbrotli1 arm64 1.1.0-2+b5 [296 kB] Get: 25 http://deb.debian.org/debian trixie/main arm64 libkrb5support0 arm64 1.21.3-3 [32.1 kB] Get: 26 http://deb.debian.org/debian trixie/main arm64 libcom-err2 arm64 1.47.1-1+b1 [23.1 kB] Get: 27 http://deb.debian.org/debian trixie/main arm64 libk5crypto3 arm64 1.21.3-3 [80.8 kB] Get: 28 http://deb.debian.org/debian trixie/main arm64 libkeyutils1 arm64 1.6.3-4 [9352 B] Get: 29 http://deb.debian.org/debian trixie/main arm64 libkrb5-3 arm64 1.21.3-3 [310 kB] Get: 30 http://deb.debian.org/debian trixie/main arm64 libgssapi-krb5-2 arm64 1.21.3-3 [126 kB] Get: 31 http://deb.debian.org/debian trixie/main arm64 libsasl2-modules-db arm64 2.1.28+dfsg1-8 [20.0 kB] Get: 32 http://deb.debian.org/debian trixie/main arm64 libsasl2-2 arm64 2.1.28+dfsg1-8 [55.4 kB] Get: 33 http://deb.debian.org/debian trixie/main arm64 libldap-2.5-0 arm64 2.5.18+dfsg-3+b1 [175 kB] Get: 34 http://deb.debian.org/debian trixie/main arm64 libnghttp2-14 arm64 1.63.0-1 [71.2 kB] Get: 35 http://deb.debian.org/debian trixie/main arm64 libpsl5t64 arm64 0.21.2-1.1 [56.8 kB] Get: 36 http://deb.debian.org/debian trixie/main arm64 librtmp1 arm64 2.4+20151223.gitfa8646d.1-2+b4 [56.7 kB] Get: 37 http://deb.debian.org/debian trixie/main arm64 libssh2-1t64 arm64 1.11.1-1 [235 kB] Get: 38 http://deb.debian.org/debian trixie/main arm64 libcurl4t64 arm64 8.10.1-2 [322 kB] Get: 39 http://deb.debian.org/debian trixie/main arm64 libexpat1 arm64 2.6.3-2 [90.1 kB] Get: 40 http://deb.debian.org/debian trixie/main arm64 libjsoncpp26 arm64 1.9.6-2 [73.1 kB] Get: 41 http://deb.debian.org/debian trixie/main arm64 librhash1 arm64 1.4.5-1 [129 kB] Get: 42 http://deb.debian.org/debian trixie/main arm64 libuv1t64 arm64 1.48.0-6 [142 kB] Get: 43 http://deb.debian.org/debian trixie/main arm64 cmake arm64 3.30.5-1 [9403 kB] Get: 44 http://deb.debian.org/debian trixie/main arm64 libdebhelper-perl all 13.20 [89.7 kB] Get: 45 http://deb.debian.org/debian trixie/main arm64 libtool all 2.4.7-7 [517 kB] Get: 46 http://deb.debian.org/debian trixie/main arm64 dh-autoreconf all 20 [17.1 kB] Get: 47 http://deb.debian.org/debian trixie/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 48 http://deb.debian.org/debian trixie/main arm64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 49 http://deb.debian.org/debian trixie/main arm64 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 50 http://deb.debian.org/debian trixie/main arm64 libelf1t64 arm64 0.192-4 [189 kB] Get: 51 http://deb.debian.org/debian trixie/main arm64 dwz arm64 0.15-1+b1 [102 kB] Get: 52 http://deb.debian.org/debian trixie/main arm64 gettext arm64 0.22.5-2 [1532 kB] Get: 53 http://deb.debian.org/debian trixie/main arm64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 54 http://deb.debian.org/debian trixie/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 55 http://deb.debian.org/debian trixie/main arm64 debhelper all 13.20 [915 kB] Get: 56 http://deb.debian.org/debian trixie/main arm64 icu-devtools arm64 72.1-5+b1 [195 kB] Get: 57 http://deb.debian.org/debian trixie/main arm64 libboost1.83-dev arm64 1.83.0-3.2 [10.6 MB] Get: 58 http://deb.debian.org/debian trixie/main arm64 libboost-dev arm64 1.83.0.2+b2 [3828 B] Get: 59 http://deb.debian.org/debian trixie/main arm64 libboost-regex1.83.0 arm64 1.83.0-3.2 [314 kB] Get: 60 http://deb.debian.org/debian trixie/main arm64 libicu-dev arm64 72.1-5+b1 [10.3 MB] Get: 61 http://deb.debian.org/debian trixie/main arm64 libboost-regex1.83-dev arm64 1.83.0-3.2 [335 kB] Get: 62 http://deb.debian.org/debian trixie/main arm64 libboost-regex-dev arm64 1.83.0.2+b2 [3852 B] Get: 63 http://deb.debian.org/debian trixie/main arm64 libcifpp-data all 7.0.7-2 [484 kB] Get: 64 http://deb.debian.org/debian trixie/main arm64 libcifpp7 arm64 7.0.7-2 [857 kB] Get: 65 http://deb.debian.org/debian trixie/main arm64 zlib1g-dev arm64 1:1.3.dfsg+really1.3.1-1 [916 kB] Get: 66 http://deb.debian.org/debian trixie/main arm64 libcifpp-dev arm64 7.0.7-2 [111 kB] Get: 67 http://deb.debian.org/debian trixie/main arm64 libmcfp-dev arm64 1.2.4-1 [16.0 kB] Get: 68 http://deb.debian.org/debian trixie/main arm64 mrc arm64 1.3.10-1 [45.4 kB] Fetched 59.3 MB in 0s (166 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libproc2-0:arm64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20066 files and directories currently installed.) Preparing to unpack .../00-libproc2-0_2%3a4.0.4-6_arm64.deb ... Unpacking libproc2-0:arm64 (2:4.0.4-6) ... Selecting previously unselected package procps. Preparing to unpack .../01-procps_2%3a4.0.4-6_arm64.deb ... Unpacking procps (2:4.0.4-6) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../02-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../03-libmagic-mgc_1%3a5.45-3_arm64.deb ... Unpacking libmagic-mgc (1:5.45-3) ... Selecting previously unselected package libmagic1t64:arm64. Preparing to unpack .../04-libmagic1t64_1%3a5.45-3_arm64.deb ... Unpacking libmagic1t64:arm64 (1:5.45-3) ... Selecting previously unselected package file. Preparing to unpack .../05-file_1%3a5.45-3_arm64.deb ... Unpacking file (1:5.45-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../06-gettext-base_0.22.5-2_arm64.deb ... Unpacking gettext-base (0.22.5-2) ... Selecting previously unselected package libuchardet0:arm64. Preparing to unpack .../07-libuchardet0_0.0.8-1+b1_arm64.deb ... Unpacking libuchardet0:arm64 (0.0.8-1+b1) ... Selecting previously unselected package groff-base. Preparing to unpack .../08-groff-base_1.23.0-5_arm64.deb ... Unpacking groff-base (1.23.0-5) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../09-bsdextrautils_2.40.2-9_arm64.deb ... Unpacking bsdextrautils (2.40.2-9) ... Selecting previously unselected package libpipeline1:arm64. Preparing to unpack .../10-libpipeline1_1.5.8-1_arm64.deb ... Unpacking libpipeline1:arm64 (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../11-man-db_2.13.0-1_arm64.deb ... Unpacking man-db (2.13.0-1) ... Selecting previously unselected package m4. Preparing to unpack .../12-m4_1.4.19-4_arm64.deb ... Unpacking m4 (1.4.19-4) ... Selecting previously unselected package autoconf. Preparing to unpack .../13-autoconf_2.72-3_all.deb ... Unpacking autoconf (2.72-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../14-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../15-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../16-autopoint_0.22.5-2_all.deb ... Unpacking autopoint (0.22.5-2) ... Selecting previously unselected package libcatch2-dev. Preparing to unpack .../17-libcatch2-dev_3.7.1-0.4_arm64.deb ... Unpacking libcatch2-dev (3.7.1-0.4) ... Selecting previously unselected package catch2. Preparing to unpack .../18-catch2_3.7.1-0.4_all.deb ... Unpacking catch2 (3.7.1-0.4) ... Selecting previously unselected package cmake-data. Preparing to unpack .../19-cmake-data_3.30.5-1_all.deb ... Unpacking cmake-data (3.30.5-1) ... Selecting previously unselected package libicu72:arm64. Preparing to unpack .../20-libicu72_72.1-5+b1_arm64.deb ... Unpacking libicu72:arm64 (72.1-5+b1) ... Selecting previously unselected package libxml2:arm64. Preparing to unpack .../21-libxml2_2.12.7+dfsg+really2.9.14-0.1_arm64.deb ... Unpacking libxml2:arm64 (2.12.7+dfsg+really2.9.14-0.1) ... Selecting previously unselected package libarchive13t64:arm64. Preparing to unpack .../22-libarchive13t64_3.7.4-1_arm64.deb ... Unpacking libarchive13t64:arm64 (3.7.4-1) ... Selecting previously unselected package libbrotli1:arm64. Preparing to unpack .../23-libbrotli1_1.1.0-2+b5_arm64.deb ... Unpacking libbrotli1:arm64 (1.1.0-2+b5) ... Selecting previously unselected package libkrb5support0:arm64. Preparing to unpack .../24-libkrb5support0_1.21.3-3_arm64.deb ... Unpacking libkrb5support0:arm64 (1.21.3-3) ... Selecting previously unselected package libcom-err2:arm64. Preparing to unpack .../25-libcom-err2_1.47.1-1+b1_arm64.deb ... Unpacking libcom-err2:arm64 (1.47.1-1+b1) ... Selecting previously unselected package libk5crypto3:arm64. Preparing to unpack .../26-libk5crypto3_1.21.3-3_arm64.deb ... Unpacking libk5crypto3:arm64 (1.21.3-3) ... Selecting previously unselected package libkeyutils1:arm64. Preparing to unpack .../27-libkeyutils1_1.6.3-4_arm64.deb ... Unpacking libkeyutils1:arm64 (1.6.3-4) ... Selecting previously unselected package libkrb5-3:arm64. Preparing to unpack .../28-libkrb5-3_1.21.3-3_arm64.deb ... Unpacking libkrb5-3:arm64 (1.21.3-3) ... Selecting previously unselected package libgssapi-krb5-2:arm64. Preparing to unpack .../29-libgssapi-krb5-2_1.21.3-3_arm64.deb ... Unpacking libgssapi-krb5-2:arm64 (1.21.3-3) ... Selecting previously unselected package libsasl2-modules-db:arm64. Preparing to unpack .../30-libsasl2-modules-db_2.1.28+dfsg1-8_arm64.deb ... Unpacking libsasl2-modules-db:arm64 (2.1.28+dfsg1-8) ... Selecting previously unselected package libsasl2-2:arm64. Preparing to unpack .../31-libsasl2-2_2.1.28+dfsg1-8_arm64.deb ... Unpacking libsasl2-2:arm64 (2.1.28+dfsg1-8) ... Selecting previously unselected package libldap-2.5-0:arm64. Preparing to unpack .../32-libldap-2.5-0_2.5.18+dfsg-3+b1_arm64.deb ... Unpacking libldap-2.5-0:arm64 (2.5.18+dfsg-3+b1) ... Selecting previously unselected package libnghttp2-14:arm64. Preparing to unpack .../33-libnghttp2-14_1.63.0-1_arm64.deb ... Unpacking libnghttp2-14:arm64 (1.63.0-1) ... Selecting previously unselected package libpsl5t64:arm64. Preparing to unpack .../34-libpsl5t64_0.21.2-1.1_arm64.deb ... Unpacking libpsl5t64:arm64 (0.21.2-1.1) ... Selecting previously unselected package librtmp1:arm64. Preparing to unpack .../35-librtmp1_2.4+20151223.gitfa8646d.1-2+b4_arm64.deb ... Unpacking librtmp1:arm64 (2.4+20151223.gitfa8646d.1-2+b4) ... Selecting previously unselected package libssh2-1t64:arm64. Preparing to unpack .../36-libssh2-1t64_1.11.1-1_arm64.deb ... Unpacking libssh2-1t64:arm64 (1.11.1-1) ... Selecting previously unselected package libcurl4t64:arm64. Preparing to unpack .../37-libcurl4t64_8.10.1-2_arm64.deb ... Unpacking libcurl4t64:arm64 (8.10.1-2) ... Selecting previously unselected package libexpat1:arm64. Preparing to unpack .../38-libexpat1_2.6.3-2_arm64.deb ... Unpacking libexpat1:arm64 (2.6.3-2) ... Selecting previously unselected package libjsoncpp26:arm64. Preparing to unpack .../39-libjsoncpp26_1.9.6-2_arm64.deb ... Unpacking libjsoncpp26:arm64 (1.9.6-2) ... Selecting previously unselected package librhash1:arm64. Preparing to unpack .../40-librhash1_1.4.5-1_arm64.deb ... Unpacking librhash1:arm64 (1.4.5-1) ... Selecting previously unselected package libuv1t64:arm64. Preparing to unpack .../41-libuv1t64_1.48.0-6_arm64.deb ... Unpacking libuv1t64:arm64 (1.48.0-6) ... Selecting previously unselected package cmake. Preparing to unpack .../42-cmake_3.30.5-1_arm64.deb ... Unpacking cmake (3.30.5-1) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../43-libdebhelper-perl_13.20_all.deb ... Unpacking libdebhelper-perl (13.20) ... Selecting previously unselected package libtool. Preparing to unpack .../44-libtool_2.4.7-7_all.deb ... Unpacking libtool (2.4.7-7) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../45-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../46-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../47-libfile-stripnondeterminism-perl_1.14.0-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.14.0-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../48-dh-strip-nondeterminism_1.14.0-1_all.deb ... Unpacking dh-strip-nondeterminism (1.14.0-1) ... Selecting previously unselected package libelf1t64:arm64. Preparing to unpack .../49-libelf1t64_0.192-4_arm64.deb ... Unpacking libelf1t64:arm64 (0.192-4) ... Selecting previously unselected package dwz. Preparing to unpack .../50-dwz_0.15-1+b1_arm64.deb ... Unpacking dwz (0.15-1+b1) ... Selecting previously unselected package gettext. Preparing to unpack .../51-gettext_0.22.5-2_arm64.deb ... Unpacking gettext (0.22.5-2) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../52-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../53-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../54-debhelper_13.20_all.deb ... Unpacking debhelper (13.20) ... Selecting previously unselected package icu-devtools. Preparing to unpack .../55-icu-devtools_72.1-5+b1_arm64.deb ... Unpacking icu-devtools (72.1-5+b1) ... Selecting previously unselected package libboost1.83-dev:arm64. Preparing to unpack .../56-libboost1.83-dev_1.83.0-3.2_arm64.deb ... Unpacking libboost1.83-dev:arm64 (1.83.0-3.2) ... Selecting previously unselected package libboost-dev:arm64. Preparing to unpack .../57-libboost-dev_1.83.0.2+b2_arm64.deb ... Unpacking libboost-dev:arm64 (1.83.0.2+b2) ... Selecting previously unselected package libboost-regex1.83.0:arm64. Preparing to unpack .../58-libboost-regex1.83.0_1.83.0-3.2_arm64.deb ... Unpacking libboost-regex1.83.0:arm64 (1.83.0-3.2) ... Selecting previously unselected package libicu-dev:arm64. Preparing to unpack .../59-libicu-dev_72.1-5+b1_arm64.deb ... Unpacking libicu-dev:arm64 (72.1-5+b1) ... Selecting previously unselected package libboost-regex1.83-dev:arm64. Preparing to unpack .../60-libboost-regex1.83-dev_1.83.0-3.2_arm64.deb ... Unpacking libboost-regex1.83-dev:arm64 (1.83.0-3.2) ... Selecting previously unselected package libboost-regex-dev:arm64. Preparing to unpack .../61-libboost-regex-dev_1.83.0.2+b2_arm64.deb ... Unpacking libboost-regex-dev:arm64 (1.83.0.2+b2) ... Selecting previously unselected package libcifpp-data. Preparing to unpack .../62-libcifpp-data_7.0.7-2_all.deb ... Unpacking libcifpp-data (7.0.7-2) ... Selecting previously unselected package libcifpp7:arm64. Preparing to unpack .../63-libcifpp7_7.0.7-2_arm64.deb ... Unpacking libcifpp7:arm64 (7.0.7-2) ... Selecting previously unselected package zlib1g-dev:arm64. Preparing to unpack .../64-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1_arm64.deb ... Unpacking zlib1g-dev:arm64 (1:1.3.dfsg+really1.3.1-1) ... Selecting previously unselected package libcifpp-dev:arm64. Preparing to unpack .../65-libcifpp-dev_7.0.7-2_arm64.deb ... Unpacking libcifpp-dev:arm64 (7.0.7-2) ... Selecting previously unselected package libmcfp-dev. Preparing to unpack .../66-libmcfp-dev_1.2.4-1_arm64.deb ... Unpacking libmcfp-dev (1.2.4-1) ... Selecting previously unselected package mrc. Preparing to unpack .../67-mrc_1.3.10-1_arm64.deb ... Unpacking mrc (1.3.10-1) ... Setting up libexpat1:arm64 (2.6.3-2) ... Setting up libpipeline1:arm64 (1.5.8-1) ... Setting up libkeyutils1:arm64 (1.6.3-4) ... Setting up libboost1.83-dev:arm64 (1.83.0-3.2) ... Setting up libicu72:arm64 (72.1-5+b1) ... Setting up bsdextrautils (2.40.2-9) ... Setting up libmagic-mgc (1:5.45-3) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libboost-regex1.83.0:arm64 (1.83.0-3.2) ... Setting up libdebhelper-perl (13.20) ... Setting up libbrotli1:arm64 (1.1.0-2+b5) ... Setting up libuv1t64:arm64 (1.48.0-6) ... Setting up libmagic1t64:arm64 (1:5.45-3) ... Setting up libpsl5t64:arm64 (0.21.2-1.1) ... Setting up libnghttp2-14:arm64 (1.63.0-1) ... Setting up gettext-base (0.22.5-2) ... Setting up m4 (1.4.19-4) ... Setting up libcom-err2:arm64 (1.47.1-1+b1) ... Setting up file (1:5.45-3) ... Setting up libelf1t64:arm64 (0.192-4) ... Setting up libkrb5support0:arm64 (1.21.3-3) ... Setting up libsasl2-modules-db:arm64 (2.1.28+dfsg1-8) ... Setting up autotools-dev (20220109.1) ... Setting up librtmp1:arm64 (2.4+20151223.gitfa8646d.1-2+b4) ... Setting up mrc (1.3.10-1) ... Setting up libjsoncpp26:arm64 (1.9.6-2) ... Setting up libproc2-0:arm64 (2:4.0.4-6) ... Setting up autopoint (0.22.5-2) ... Setting up icu-devtools (72.1-5+b1) ... Setting up libk5crypto3:arm64 (1.21.3-3) ... Setting up libcifpp-data (7.0.7-2) ... Setting up libsasl2-2:arm64 (2.1.28+dfsg1-8) ... Setting up autoconf (2.72-3) ... Setting up zlib1g-dev:arm64 (1:1.3.dfsg+really1.3.1-1) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.24) ... Setting up libuchardet0:arm64 (0.0.8-1+b1) ... Setting up procps (2:4.0.4-6) ... Setting up libmcfp-dev (1.2.4-1) ... Setting up cmake-data (3.30.5-1) ... Setting up librhash1:arm64 (1.4.5-1) ... Setting up libkrb5-3:arm64 (1.21.3-3) ... Setting up libboost-dev:arm64 (1.83.0.2+b2) ... Setting up libssh2-1t64:arm64 (1.11.1-1) ... Setting up libcatch2-dev (3.7.1-0.4) ... Setting up libicu-dev:arm64 (72.1-5+b1) ... Setting up libxml2:arm64 (2.12.7+dfsg+really2.9.14-0.1) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up catch2 (3.7.1-0.4) ... Setting up gettext (0.22.5-2) ... Setting up libtool (2.4.7-7) ... Setting up libcifpp7:arm64 (7.0.7-2) ... Setting up libldap-2.5-0:arm64 (2.5.18+dfsg-3+b1) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up libgssapi-krb5-2:arm64 (1.21.3-3) ... Setting up libboost-regex1.83-dev:arm64 (1.83.0-3.2) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up groff-base (1.23.0-5) ... Setting up libboost-regex-dev:arm64 (1.83.0.2+b2) ... Setting up libarchive13t64:arm64 (3.7.4-1) ... Setting up libcurl4t64:arm64 (8.10.1-2) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libcifpp-dev:arm64 (7.0.7-2) ... Setting up cmake (3.30.5-1) ... Setting up debhelper (13.20) ... Processing triggers for libc-bin (2.40-3) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/dssp-4.4.10/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../dssp_4.4.10-1_source.changes dpkg-buildpackage: info: source package dssp dpkg-buildpackage: info: source version 4.4.10-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Maarten L. Hekkelman dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 debian/rules clean dh clean dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf dh_auto_configure cd obj-aarch64-linux-gnu && DEB_PYTHON_INSTALL_LAYOUT=deb PKG_CONFIG=/usr/bin/pkg-config cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/aarch64-linux-gnu .. -- The CXX compiler identification is GNU 14.2.0 -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Git hash not found -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success -- Found Threads: TRUE -- The C compiler identification is GNU 14.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Git hash not found -- Configuring done (1.7s) -- Generating done (0.0s) CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY CMAKE_INSTALL_LOCALSTATEDIR CMAKE_INSTALL_RUNSTATEDIR CMAKE_INSTALL_SYSCONFDIR -- Build files have been written to: /build/reproducible-path/dssp-4.4.10/obj-aarch64-linux-gnu dh_auto_build cd obj-aarch64-linux-gnu && make -j12 "INSTALL=install --strip-program=true" VERBOSE=1 make[1]: Entering directory '/build/reproducible-path/dssp-4.4.10/obj-aarch64-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/dssp-4.4.10 -B/build/reproducible-path/dssp-4.4.10/obj-aarch64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/dssp-4.4.10/obj-aarch64-linux-gnu/CMakeFiles /build/reproducible-path/dssp-4.4.10/obj-aarch64-linux-gnu//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/build/reproducible-path/dssp-4.4.10/obj-aarch64-linux-gnu' make -f libdssp/CMakeFiles/dssp.dir/build.make libdssp/CMakeFiles/dssp.dir/depend make[3]: Entering directory '/build/reproducible-path/dssp-4.4.10/obj-aarch64-linux-gnu' cd /build/reproducible-path/dssp-4.4.10/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/dssp-4.4.10 /build/reproducible-path/dssp-4.4.10/libdssp /build/reproducible-path/dssp-4.4.10/obj-aarch64-linux-gnu /build/reproducible-path/dssp-4.4.10/obj-aarch64-linux-gnu/libdssp /build/reproducible-path/dssp-4.4.10/obj-aarch64-linux-gnu/libdssp/CMakeFiles/dssp.dir/DependInfo.cmake "--color=" make -f CMakeFiles/mrc-depends-file_mkdssp.dir/build.make CMakeFiles/mrc-depends-file_mkdssp.dir/depend make[3]: Entering directory '/build/reproducible-path/dssp-4.4.10/obj-aarch64-linux-gnu' cd /build/reproducible-path/dssp-4.4.10/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/dssp-4.4.10 /build/reproducible-path/dssp-4.4.10 /build/reproducible-path/dssp-4.4.10/obj-aarch64-linux-gnu /build/reproducible-path/dssp-4.4.10/obj-aarch64-linux-gnu /build/reproducible-path/dssp-4.4.10/obj-aarch64-linux-gnu/CMakeFiles/mrc-depends-file_mkdssp.dir/DependInfo.cmake "--color=" make -f test/CMakeFiles/mrc-depends-file_unit-test-dssp.dir/build.make test/CMakeFiles/mrc-depends-file_unit-test-dssp.dir/depend make[3]: Entering directory '/build/reproducible-path/dssp-4.4.10/obj-aarch64-linux-gnu' cd /build/reproducible-path/dssp-4.4.10/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/dssp-4.4.10 /build/reproducible-path/dssp-4.4.10/test /build/reproducible-path/dssp-4.4.10/obj-aarch64-linux-gnu /build/reproducible-path/dssp-4.4.10/obj-aarch64-linux-gnu/test /build/reproducible-path/dssp-4.4.10/obj-aarch64-linux-gnu/test/CMakeFiles/mrc-depends-file_unit-test-dssp.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/dssp-4.4.10/obj-aarch64-linux-gnu' make -f libdssp/CMakeFiles/dssp.dir/build.make libdssp/CMakeFiles/dssp.dir/build make[3]: Entering directory '/build/reproducible-path/dssp-4.4.10/obj-aarch64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/dssp-4.4.10/obj-aarch64-linux-gnu' make -f CMakeFiles/mrc-depends-file_mkdssp.dir/build.make CMakeFiles/mrc-depends-file_mkdssp.dir/build [ 10%] Building CXX object libdssp/CMakeFiles/dssp.dir/src/dssp.cpp.o make[3]: Leaving directory '/build/reproducible-path/dssp-4.4.10/obj-aarch64-linux-gnu' cd /build/reproducible-path/dssp-4.4.10/obj-aarch64-linux-gnu/libdssp && /usr/bin/c++ -DCACHE_DIR=\"/var/cache/libcifpp\" -DDATA_DIR=\"/usr/share/libcifpp\" -I/build/reproducible-path/dssp-4.4.10/libdssp/include -I/build/reproducible-path/dssp-4.4.10/libdssp/../src -g -O2 -ffile-prefix-map=/build/reproducible-path/dssp-4.4.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -std=gnu++20 -fPIC -MD -MT libdssp/CMakeFiles/dssp.dir/src/dssp.cpp.o -MF CMakeFiles/dssp.dir/src/dssp.cpp.o.d -o CMakeFiles/dssp.dir/src/dssp.cpp.o -c /build/reproducible-path/dssp-4.4.10/libdssp/src/dssp.cpp make[3]: Entering directory '/build/reproducible-path/dssp-4.4.10/obj-aarch64-linux-gnu' /usr/bin/mrc -o /build/reproducible-path/dssp-4.4.10/obj-aarch64-linux-gnu/mkdssp_rsrc.obj -d /build/reproducible-path/dssp-4.4.10/obj-aarch64-linux-gnu/mkdssp_rsrc.d /usr/share/libcifpp/mmcif_pdbx.dic /usr/share/libcifpp/mmcif_ddl.dic /build/reproducible-path/dssp-4.4.10/libdssp/mmcif_pdbx/dssp-extension.dic make -f test/CMakeFiles/mrc-depends-file_unit-test-dssp.dir/build.make test/CMakeFiles/mrc-depends-file_unit-test-dssp.dir/build make[3]: Entering directory '/build/reproducible-path/dssp-4.4.10/obj-aarch64-linux-gnu' cd /build/reproducible-path/dssp-4.4.10/obj-aarch64-linux-gnu/test && /usr/bin/mrc -o /build/reproducible-path/dssp-4.4.10/obj-aarch64-linux-gnu/test/unit-test-dssp_rsrc.obj -d /build/reproducible-path/dssp-4.4.10/obj-aarch64-linux-gnu/test/unit-test-dssp_rsrc.d /usr/share/libcifpp/mmcif_pdbx.dic /usr/share/libcifpp/mmcif_ddl.dic /build/reproducible-path/dssp-4.4.10/test/../libdssp/mmcif_pdbx/dssp-extension.dic make[3]: Leaving directory '/build/reproducible-path/dssp-4.4.10/obj-aarch64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/dssp-4.4.10/obj-aarch64-linux-gnu' [ 20%] Building CXX object libdssp/CMakeFiles/dssp.dir/src/dssp-io.cpp.o cd /build/reproducible-path/dssp-4.4.10/obj-aarch64-linux-gnu/libdssp && /usr/bin/c++ -DCACHE_DIR=\"/var/cache/libcifpp\" -DDATA_DIR=\"/usr/share/libcifpp\" -I/build/reproducible-path/dssp-4.4.10/libdssp/include -I/build/reproducible-path/dssp-4.4.10/libdssp/../src -g -O2 -ffile-prefix-map=/build/reproducible-path/dssp-4.4.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -std=gnu++20 -fPIC -MD -MT libdssp/CMakeFiles/dssp.dir/src/dssp-io.cpp.o -MF CMakeFiles/dssp.dir/src/dssp-io.cpp.o.d -o CMakeFiles/dssp.dir/src/dssp-io.cpp.o -c /build/reproducible-path/dssp-4.4.10/libdssp/src/dssp-io.cpp [ 20%] Built target mrc-depends-file_unit-test-dssp [ 20%] Built target mrc-depends-file_mkdssp [ 30%] Linking CXX static library libdssp.a cd /build/reproducible-path/dssp-4.4.10/obj-aarch64-linux-gnu/libdssp && /usr/bin/cmake -P CMakeFiles/dssp.dir/cmake_clean_target.cmake cd /build/reproducible-path/dssp-4.4.10/obj-aarch64-linux-gnu/libdssp && /usr/bin/cmake -E cmake_link_script CMakeFiles/dssp.dir/link.txt --verbose=1 /usr/bin/ar qc libdssp.a CMakeFiles/dssp.dir/src/dssp.cpp.o "CMakeFiles/dssp.dir/src/dssp-io.cpp.o" /usr/bin/ranlib libdssp.a make[3]: Leaving directory '/build/reproducible-path/dssp-4.4.10/obj-aarch64-linux-gnu' [ 30%] Built target dssp make -f CMakeFiles/mkdssp.dir/build.make CMakeFiles/mkdssp.dir/depend make[3]: Entering directory '/build/reproducible-path/dssp-4.4.10/obj-aarch64-linux-gnu' make -f test/CMakeFiles/unit-test-dssp.dir/build.make test/CMakeFiles/unit-test-dssp.dir/depend make[3]: Entering directory '/build/reproducible-path/dssp-4.4.10/obj-aarch64-linux-gnu' [ 40%] Generating mkdssp_rsrc.obj [ 50%] Generating unit-test-dssp_rsrc.obj /usr/bin/mrc -o /build/reproducible-path/dssp-4.4.10/obj-aarch64-linux-gnu/mkdssp_rsrc.obj /usr/share/libcifpp/mmcif_pdbx.dic /usr/share/libcifpp/mmcif_ddl.dic /build/reproducible-path/dssp-4.4.10/libdssp/mmcif_pdbx/dssp-extension.dic cd /build/reproducible-path/dssp-4.4.10/obj-aarch64-linux-gnu/test && /usr/bin/mrc -o /build/reproducible-path/dssp-4.4.10/obj-aarch64-linux-gnu/test/unit-test-dssp_rsrc.obj /usr/share/libcifpp/mmcif_pdbx.dic /usr/share/libcifpp/mmcif_ddl.dic /build/reproducible-path/dssp-4.4.10/test/../libdssp/mmcif_pdbx/dssp-extension.dic cd /build/reproducible-path/dssp-4.4.10/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/dssp-4.4.10 /build/reproducible-path/dssp-4.4.10 /build/reproducible-path/dssp-4.4.10/obj-aarch64-linux-gnu /build/reproducible-path/dssp-4.4.10/obj-aarch64-linux-gnu /build/reproducible-path/dssp-4.4.10/obj-aarch64-linux-gnu/CMakeFiles/mkdssp.dir/DependInfo.cmake "--color=" cd /build/reproducible-path/dssp-4.4.10/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/dssp-4.4.10 /build/reproducible-path/dssp-4.4.10/test /build/reproducible-path/dssp-4.4.10/obj-aarch64-linux-gnu /build/reproducible-path/dssp-4.4.10/obj-aarch64-linux-gnu/test /build/reproducible-path/dssp-4.4.10/obj-aarch64-linux-gnu/test/CMakeFiles/unit-test-dssp.dir/DependInfo.cmake "--color=" Dependencies file "mkdssp_rsrc.d" is newer than depends file "/build/reproducible-path/dssp-4.4.10/obj-aarch64-linux-gnu/CMakeFiles/mkdssp.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target mkdssp make[3]: Leaving directory '/build/reproducible-path/dssp-4.4.10/obj-aarch64-linux-gnu' make -f CMakeFiles/mkdssp.dir/build.make CMakeFiles/mkdssp.dir/build make[3]: Entering directory '/build/reproducible-path/dssp-4.4.10/obj-aarch64-linux-gnu' Dependencies file "test/unit-test-dssp_rsrc.d" is newer than depends file "/build/reproducible-path/dssp-4.4.10/obj-aarch64-linux-gnu/test/CMakeFiles/unit-test-dssp.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target unit-test-dssp make[3]: Leaving directory '/build/reproducible-path/dssp-4.4.10/obj-aarch64-linux-gnu' make -f test/CMakeFiles/unit-test-dssp.dir/build.make test/CMakeFiles/unit-test-dssp.dir/build make[3]: Entering directory '/build/reproducible-path/dssp-4.4.10/obj-aarch64-linux-gnu' [ 60%] Building CXX object CMakeFiles/mkdssp.dir/src/mkdssp.cpp.o /usr/bin/c++ -DCACHE_DIR=\"/var/cache/libcifpp\" -DDATA_DIR=\"/usr/share/libcifpp\" -I/build/reproducible-path/dssp-4.4.10/libdssp/include -I/build/reproducible-path/dssp-4.4.10/libdssp/../src -g -O2 -ffile-prefix-map=/build/reproducible-path/dssp-4.4.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -std=gnu++20 -MD -MT CMakeFiles/mkdssp.dir/src/mkdssp.cpp.o -MF CMakeFiles/mkdssp.dir/src/mkdssp.cpp.o.d -o CMakeFiles/mkdssp.dir/src/mkdssp.cpp.o -c /build/reproducible-path/dssp-4.4.10/src/mkdssp.cpp [ 70%] Building CXX object test/CMakeFiles/unit-test-dssp.dir/unit-test-dssp.cpp.o cd /build/reproducible-path/dssp-4.4.10/obj-aarch64-linux-gnu/test && /usr/bin/c++ -DCACHE_DIR=\"/var/cache/libcifpp\" -DCATCH22=0 -DDATA_DIR=\"/usr/share/libcifpp\" -I/build/reproducible-path/dssp-4.4.10/test/src -I/build/reproducible-path/dssp-4.4.10/test/include -I/build/reproducible-path/dssp-4.4.10/libdssp/include -I/build/reproducible-path/dssp-4.4.10/libdssp/../src -g -O2 -ffile-prefix-map=/build/reproducible-path/dssp-4.4.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -std=gnu++20 -MD -MT test/CMakeFiles/unit-test-dssp.dir/unit-test-dssp.cpp.o -MF CMakeFiles/unit-test-dssp.dir/unit-test-dssp.cpp.o.d -o CMakeFiles/unit-test-dssp.dir/unit-test-dssp.cpp.o -c /build/reproducible-path/dssp-4.4.10/test/unit-test-dssp.cpp [ 80%] Building CXX object test/CMakeFiles/unit-test-dssp.dir/__/libdssp/src/dssp-io.cpp.o cd /build/reproducible-path/dssp-4.4.10/obj-aarch64-linux-gnu/test && /usr/bin/c++ -DCACHE_DIR=\"/var/cache/libcifpp\" -DCATCH22=0 -DDATA_DIR=\"/usr/share/libcifpp\" -I/build/reproducible-path/dssp-4.4.10/test/src -I/build/reproducible-path/dssp-4.4.10/test/include -I/build/reproducible-path/dssp-4.4.10/libdssp/include -I/build/reproducible-path/dssp-4.4.10/libdssp/../src -g -O2 -ffile-prefix-map=/build/reproducible-path/dssp-4.4.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -std=gnu++20 -MD -MT test/CMakeFiles/unit-test-dssp.dir/__/libdssp/src/dssp-io.cpp.o -MF CMakeFiles/unit-test-dssp.dir/__/libdssp/src/dssp-io.cpp.o.d -o CMakeFiles/unit-test-dssp.dir/__/libdssp/src/dssp-io.cpp.o -c /build/reproducible-path/dssp-4.4.10/libdssp/src/dssp-io.cpp [ 90%] Linking CXX executable mkdssp /usr/bin/cmake -E cmake_link_script CMakeFiles/mkdssp.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/dssp-4.4.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -Wl,-z,relro CMakeFiles/mkdssp.dir/src/mkdssp.cpp.o mkdssp_rsrc.obj -o mkdssp libdssp/libdssp.a /usr/lib/aarch64-linux-gnu/libcifpp.so.7.0.7 /usr/lib/aarch64-linux-gnu/libz.so make[3]: Leaving directory '/build/reproducible-path/dssp-4.4.10/obj-aarch64-linux-gnu' [ 90%] Built target mkdssp [100%] Linking CXX executable unit-test-dssp cd /build/reproducible-path/dssp-4.4.10/obj-aarch64-linux-gnu/test && /usr/bin/cmake -E cmake_link_script CMakeFiles/unit-test-dssp.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/dssp-4.4.10=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wextra -Wno-unused-parameter -Wno-missing-field-initializers -Wl,-z,relro "CMakeFiles/unit-test-dssp.dir/unit-test-dssp.cpp.o" "CMakeFiles/unit-test-dssp.dir/__/libdssp/src/dssp-io.cpp.o" "unit-test-dssp_rsrc.obj" -o unit-test-dssp ../libdssp/libdssp.a /usr/lib/aarch64-linux-gnu/libcifpp.so.7.0.7 /usr/lib/libCatch2.a /usr/lib/aarch64-linux-gnu/libz.so make[3]: Leaving directory '/build/reproducible-path/dssp-4.4.10/obj-aarch64-linux-gnu' [100%] Built target unit-test-dssp make[2]: Leaving directory '/build/reproducible-path/dssp-4.4.10/obj-aarch64-linux-gnu' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/dssp-4.4.10/obj-aarch64-linux-gnu/CMakeFiles 0 make[1]: Leaving directory '/build/reproducible-path/dssp-4.4.10/obj-aarch64-linux-gnu' dh_auto_test cd obj-aarch64-linux-gnu && make -j12 test ARGS\+=--verbose ARGS\+=-j12 make[1]: Entering directory '/build/reproducible-path/dssp-4.4.10/obj-aarch64-linux-gnu' Running tests... /usr/bin/ctest --force-new-ctest-process --verbose -j12 UpdateCTestConfiguration from :/build/reproducible-path/dssp-4.4.10/obj-aarch64-linux-gnu/DartConfiguration.tcl Parse Config file:/build/reproducible-path/dssp-4.4.10/obj-aarch64-linux-gnu/DartConfiguration.tcl UpdateCTestConfiguration from :/build/reproducible-path/dssp-4.4.10/obj-aarch64-linux-gnu/DartConfiguration.tcl Parse Config file:/build/reproducible-path/dssp-4.4.10/obj-aarch64-linux-gnu/DartConfiguration.tcl Test project /build/reproducible-path/dssp-4.4.10/obj-aarch64-linux-gnu Constructing a list of tests Done constructing a list of tests Updating test list for fixtures Added 0 tests to meet fixture requirements Checking test dependency graph... Checking test dependency graph end test 1 Start 1: unit-test-dssp 1: Test command: /build/reproducible-path/dssp-4.4.10/obj-aarch64-linux-gnu/test/unit-test-dssp "--data-dir" "/build/reproducible-path/dssp-4.4.10/test" "--rsrc-dir" "/build/reproducible-path/dssp-4.4.10/obj-aarch64-linux-gnu/test/_deps/cifpp-src/rsrc" 1: Working Directory: /build/reproducible-path/dssp-4.4.10/obj-aarch64-linux-gnu/test 1: Test timeout computed to be: 1500 1: Randomness seeded to: 2310096111 1: =============================================================================== 1: All tests passed (1272 assertions in 5 test cases) 1: 1/1 Test #1: unit-test-dssp ................... Passed 0.61 sec 100% tests passed, 0 tests failed out of 1 Total Test time (real) = 0.61 sec make[1]: Leaving directory '/build/reproducible-path/dssp-4.4.10/obj-aarch64-linux-gnu' create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install --destdir=debian/dssp/ cd obj-aarch64-linux-gnu && make -j12 install DESTDIR=/build/reproducible-path/dssp-4.4.10/debian/dssp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/reproducible-path/dssp-4.4.10/obj-aarch64-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/dssp-4.4.10 -B/build/reproducible-path/dssp-4.4.10/obj-aarch64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall make[2]: Entering directory '/build/reproducible-path/dssp-4.4.10/obj-aarch64-linux-gnu' make[2]: Nothing to be done for 'preinstall'. make[2]: Leaving directory '/build/reproducible-path/dssp-4.4.10/obj-aarch64-linux-gnu' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "None" -- Installing: /build/reproducible-path/dssp-4.4.10/debian/dssp/usr/lib/aarch64-linux-gnu/libdssp.a -- Installing: /build/reproducible-path/dssp-4.4.10/debian/dssp/usr/include/dssp.hpp -- Installing: /build/reproducible-path/dssp-4.4.10/debian/dssp/usr/lib/cmake/dssp/dsspTargets.cmake -- Installing: /build/reproducible-path/dssp-4.4.10/debian/dssp/usr/lib/cmake/dssp/dsspTargets-none.cmake -- Installing: /build/reproducible-path/dssp-4.4.10/debian/dssp/usr/lib/cmake/dssp/dsspConfig.cmake -- Installing: /build/reproducible-path/dssp-4.4.10/debian/dssp/usr/share/libcifpp/dssp-extension.dic -- Installing: /build/reproducible-path/dssp-4.4.10/debian/dssp/usr/bin/mkdssp -- Installing: /build/reproducible-path/dssp-4.4.10/debian/dssp/usr/share/man/man1/mkdssp.1 make[1]: Leaving directory '/build/reproducible-path/dssp-4.4.10/obj-aarch64-linux-gnu' dh_installdocs dh_installchangelogs dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 from: /lib/ld-linux-aarch64.so.1 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 to: /lib/ld-linux-aarch64.so.1.usr-is-merged dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'dssp' in '../dssp_4.4.10-1_arm64.deb'. dpkg-deb: building package 'dssp-dbgsym' in '../dssp-dbgsym_4.4.10-1_arm64.deb'. dpkg-genbuildinfo --build=binary -O../dssp_4.4.10-1_arm64.buildinfo dpkg-genchanges --build=binary -O../dssp_4.4.10-1_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/3245150 and its subdirectories I: Current time: Tue Dec 2 12:34:42 -12 2025 I: pbuilder-time-stamp: 1764722082 Wed Oct 30 18:11:44 UTC 2024 I: 1st build successful. Starting 2nd build on remote node codethink03-arm64.debian.net. Wed Oct 30 18:11:44 UTC 2024 I: Preparing to do remote build '2' on codethink03-arm64.debian.net. Wed Oct 30 18:16:32 UTC 2024 I: Deleting $TMPDIR on codethink03-arm64.debian.net. Wed Oct 30 18:16:33 UTC 2024 I: dssp_4.4.10-1_arm64.changes: Format: 1.8 Date: Thu, 17 Oct 2024 18:50:13 +0200 Source: dssp Binary: dssp dssp-dbgsym Architecture: arm64 Version: 4.4.10-1 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Maarten L. Hekkelman Description: dssp - protein secondary structure assignment based on 3D structure Closes: 1045047 Changes: dssp (4.4.10-1) unstable; urgency=medium . * New upstream. * Fix ftbfs, Closes: #1045047 Checksums-Sha1: 448cc0c7a70af8a17dec923b81f29b1cf58e331f 2886976 dssp-dbgsym_4.4.10-1_arm64.deb 9538a1d26fb3700c0421e88d900bf941c245cd6d 6269 dssp_4.4.10-1_arm64.buildinfo 0619a4e6877a841de52b9a7c264b11c8476dc7f9 668212 dssp_4.4.10-1_arm64.deb Checksums-Sha256: 638044c0012ae901326df14ec48b9dce7796f22c26a6eb863962bbc6dfbeb365 2886976 dssp-dbgsym_4.4.10-1_arm64.deb 6a40281ee9c57a78bd08042b93aef5dd1a865041a0326b1040d49d35b301bdc7 6269 dssp_4.4.10-1_arm64.buildinfo 8e9579223e1a25c8a43873f485371486a4a1c2c0e3b1b1912c4fe4e228c53048 668212 dssp_4.4.10-1_arm64.deb Files: 7f89673f4a9aa063560d501d1a69294a 2886976 debug optional dssp-dbgsym_4.4.10-1_arm64.deb 7240371009753dad8805bba8a1a97043 6269 science optional dssp_4.4.10-1_arm64.buildinfo 6de0211f4a3e6cf136124aaab3417060 668212 science optional dssp_4.4.10-1_arm64.deb Wed Oct 30 18:16:34 UTC 2024 I: diffoscope 282 will be used to compare the two builds: Running as unit: rb-diffoscope-arm64_2-59795.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.ASuSCsdJ/dssp_4.4.10-1.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.ASuSCsdJ/dssp_4.4.10-1.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.ASuSCsdJ/dssp_4.4.10-1.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.ASuSCsdJ/b1/dssp_4.4.10-1_arm64.changes /srv/reproducible-results/rbuild-debian/r-b-build.ASuSCsdJ/b2/dssp_4.4.10-1_arm64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.459s) 0.459s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.061s) 0.061s 12 calls diffoscope.comparators.binary.FilesystemFile ## specialize (total time: 0.000s) 0.000s 1 call specialize Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 905ms CPU time consumed: 899ms Wed Oct 30 18:16:35 UTC 2024 I: diffoscope 282 found no differences in the changes files, and a .buildinfo file also exists. Wed Oct 30 18:16:35 UTC 2024 I: dssp from trixie built successfully and reproducibly on arm64. Wed Oct 30 18:16:37 UTC 2024 I: Submitting .buildinfo files to external archives: Wed Oct 30 18:16:37 UTC 2024 I: Submitting 8.0K b1/dssp_4.4.10-1_arm64.buildinfo.asc Wed Oct 30 18:16:38 UTC 2024 I: Submitting 8.0K b2/dssp_4.4.10-1_arm64.buildinfo.asc Wed Oct 30 18:16:39 UTC 2024 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Wed Oct 30 18:16:39 UTC 2024 I: Done submitting .buildinfo files. Wed Oct 30 18:16:39 UTC 2024 I: Removing signed dssp_4.4.10-1_arm64.buildinfo.asc files: removed './b1/dssp_4.4.10-1_arm64.buildinfo.asc' removed './b2/dssp_4.4.10-1_arm64.buildinfo.asc'