Wed Dec 11 23:04:32 UTC 2024 I: starting to build dialign/trixie/arm64 on jenkins on '2024-12-11 23:04' Wed Dec 11 23:04:32 UTC 2024 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/arm64_5/73361/console.log Wed Dec 11 23:04:32 UTC 2024 I: Downloading source for trixie/dialign=2.2.1-13 --2024-12-11 23:04:33-- http://deb.debian.org/debian/pool/main/d/dialign/dialign_2.2.1-13.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2141 (2.1K) [text/prs.lines.tag] Saving to: ‘dialign_2.2.1-13.dsc’ 0K .. 100% 218M=0s 2024-12-11 23:04:33 (218 MB/s) - ‘dialign_2.2.1-13.dsc’ saved [2141/2141] Wed Dec 11 23:04:33 UTC 2024 I: dialign_2.2.1-13.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: dialign Binary: dialign Architecture: any Version: 2.2.1-13 Maintainer: Debian Med Packaging Team Uploaders: Charles Plessy , Andreas Tille , Étienne Mollier Homepage: https://dialign.gobics.de/ Standards-Version: 4.7.0 Vcs-Browser: https://salsa.debian.org/med-team/dialign Vcs-Git: https://salsa.debian.org/med-team/dialign.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13) Package-List: dialign deb science optional arch=any Checksums-Sha1: 2b5b13f57a2067d122afd54916497cfb5ad7b42f 209015 dialign_2.2.1.orig.tar.gz 3afa682fb19d323d91c1406690709b8ea6a35852 14020 dialign_2.2.1-13.debian.tar.xz Checksums-Sha256: 046361bb4ca6e4ab2ac5e634cfcd673f964a887006c09c1b8bd3310fac86f519 209015 dialign_2.2.1.orig.tar.gz 3047f114dbf8524056c7c87365dc44c1d2603dc819678c974e512dca26bba725 14020 dialign_2.2.1-13.debian.tar.xz Files: 3ea891efbaac8572f9ff1dc7f1d3c5f8 209015 dialign_2.2.1.orig.tar.gz 0dd500028fb30c59a7f3a79c838165bf 14020 dialign_2.2.1-13.debian.tar.xz Dgit: fe1168cbe75fd211db305aaa7e7b61fb02a5947a debian archive/debian/2.2.1-13 https://git.dgit.debian.org/dialign -----BEGIN PGP SIGNATURE----- iQJIBAEBCgAyFiEEj5GyJ8fW8rGUjII2eTz2fo8NEdoFAmaHCcMUHGVtb2xsaWVy QGRlYmlhbi5vcmcACgkQeTz2fo8NEdp3vw/+MNpM+p2zN55378H4Pqi4SREvk0f1 4CI7b3axVIyPOG9XRvCWdAotGEOkZr8FL7xo111jjNvdiLo6mJyxibgWg8aEyxSL 6LkmnI7tSKNMzjEClgA3u9JHc4mK9cGzjogJNPjFPn4LPXZwIASAFkchNy8WUWZu jIuPFv5ID6cPVsTH3xuvDrKX1PTrZA/AvoizvuF4l019UdvSbI9UuLEAwAefr9DG E8JxRbxbEJWZ6MWZGmganQEmdXpaTy6v3o4ucPQPB2L15teNtRHcIMs+ge+5aCL7 Ve5iXKOsSX7KB1RgV1e7BlrX2CjqdNFoXRvVDOpR8SR1cUfFAYoFN28UystuMJdZ K4EWhyLk9KYM/TsPfjjNzlybGnyUP6b4hyWAwjOAUzroZCFseuw+0enSPbT6eMU1 elfKOxxfPJ+IXB+btDx3TAlPiwXd6eqNmT0DrnkW6OOjKOasatx+RtUzGTy2Or6m 9/qqRluc1snrtdSvnJXPjXZStp7mNP4YXSf87IO0DNZ0neiCJ6um9vCXeYMABQh6 3EbQGhIrd8JE5CAUB+uuXenuDP2f5Il7zou8Ld8J3DC6E32sPxZQO92XVMZsn24v miAuqUA4Dw6mtESsMKnayw3p6ChwjrTyc6aeK4ciLB0TWdukg5CQvBP0Tp/j2Pih g0spZv8egyKsEA4= =c5j6 -----END PGP SIGNATURE----- Wed Dec 11 23:04:33 UTC 2024 I: Checking whether the package is not for us Wed Dec 11 23:04:33 UTC 2024 I: Starting 1st build on remote node codethink03-arm64.debian.net. Wed Dec 11 23:04:33 UTC 2024 I: Preparing to do remote build '1' on codethink03-arm64.debian.net. Wed Dec 11 23:05:00 UTC 2024 I: Deleting $TMPDIR on codethink03-arm64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Tue Jan 13 17:27:34 -12 2026 I: pbuilder-time-stamp: 1768368454 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [dialign_2.2.1-13.dsc] I: copying [./dialign_2.2.1.orig.tar.gz] I: copying [./dialign_2.2.1-13.debian.tar.xz] I: Extracting source gpgv: Signature made Thu Jul 4 20:44:51 2024 gpgv: using RSA key 8F91B227C7D6F2B1948C8236793CF67E8F0D11DA gpgv: issuer "emollier@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./dialign_2.2.1-13.dsc: no acceptable signature found dpkg-source: info: extracting dialign in dialign-2.2.1 dpkg-source: info: unpacking dialign_2.2.1.orig.tar.gz dpkg-source: info: unpacking dialign_2.2.1-13.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying 20_no_DIALIGN2_DIR.patch dpkg-source: info: applying 30_local_doc.patch dpkg-source: info: applying hardening.patch dpkg-source: info: applying fix_excess_argument.patch dpkg-source: info: applying spelling.patch dpkg-source: info: applying fix-declarations.patch dpkg-source: info: applying gcc-14.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/462841/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='arm64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' DISTRIBUTION='trixie' HOME='/root' HOST_ARCH='arm64' IFS=' ' INVOCATION_ID='617de542f14446dfa5f49c7f388e141e' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='462841' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.4nSkraBs/pbuilderrc_d4Ek --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.4nSkraBs/b1 --logfile b1/build.log dialign_2.2.1-13.dsc' SUDO_GID='109' SUDO_UID='104' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://192.168.101.4:3128' I: uname -a Linux codethink03-arm64 6.1.0-28-cloud-arm64 #1 SMP Debian 6.1.119-1 (2024-11-22) aarch64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Nov 22 2024 /bin -> usr/bin I: user script /srv/workspace/pbuilder/462841/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: arm64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13) dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 20083 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libdebhelper-perl{a} libelf1t64{a} libfile-stripnondeterminism-perl{a} libicu72{a} libmagic-mgc{a} libmagic1t64{a} libpipeline1{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 29 newly installed, 0 to remove and 0 not upgraded. Need to get 19.4 MB of archives. After unpacking 77.7 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main arm64 sensible-utils all 0.0.24 [24.8 kB] Get: 2 http://deb.debian.org/debian trixie/main arm64 libmagic-mgc arm64 1:5.45-3+b1 [314 kB] Get: 3 http://deb.debian.org/debian trixie/main arm64 libmagic1t64 arm64 1:5.45-3+b1 [102 kB] Get: 4 http://deb.debian.org/debian trixie/main arm64 file arm64 1:5.45-3+b1 [43.4 kB] Get: 5 http://deb.debian.org/debian trixie/main arm64 gettext-base arm64 0.22.5-2 [198 kB] Get: 6 http://deb.debian.org/debian trixie/main arm64 libuchardet0 arm64 0.0.8-1+b2 [69.2 kB] Get: 7 http://deb.debian.org/debian trixie/main arm64 groff-base arm64 1.23.0-6 [1130 kB] Get: 8 http://deb.debian.org/debian trixie/main arm64 bsdextrautils arm64 2.40.2-12 [91.4 kB] Get: 9 http://deb.debian.org/debian trixie/main arm64 libpipeline1 arm64 1.5.8-1 [40.2 kB] Get: 10 http://deb.debian.org/debian trixie/main arm64 man-db arm64 2.13.0-1 [1404 kB] Get: 11 http://deb.debian.org/debian trixie/main arm64 m4 arm64 1.4.19-4 [277 kB] Get: 12 http://deb.debian.org/debian trixie/main arm64 autoconf all 2.72-3 [493 kB] Get: 13 http://deb.debian.org/debian trixie/main arm64 autotools-dev all 20220109.1 [51.6 kB] Get: 14 http://deb.debian.org/debian trixie/main arm64 automake all 1:1.16.5-1.3 [823 kB] Get: 15 http://deb.debian.org/debian trixie/main arm64 autopoint all 0.22.5-2 [723 kB] Get: 16 http://deb.debian.org/debian trixie/main arm64 libdebhelper-perl all 13.20 [89.7 kB] Get: 17 http://deb.debian.org/debian trixie/main arm64 libtool all 2.4.7-8 [517 kB] Get: 18 http://deb.debian.org/debian trixie/main arm64 dh-autoreconf all 20 [17.1 kB] Get: 19 http://deb.debian.org/debian trixie/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 20 http://deb.debian.org/debian trixie/main arm64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 21 http://deb.debian.org/debian trixie/main arm64 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 22 http://deb.debian.org/debian trixie/main arm64 libelf1t64 arm64 0.192-4 [189 kB] Get: 23 http://deb.debian.org/debian trixie/main arm64 dwz arm64 0.15-1+b1 [102 kB] Get: 24 http://deb.debian.org/debian trixie/main arm64 libicu72 arm64 72.1-5+b1 [9239 kB] Get: 25 http://deb.debian.org/debian trixie/main arm64 libxml2 arm64 2.12.7+dfsg+really2.9.14-0.2+b1 [630 kB] Get: 26 http://deb.debian.org/debian trixie/main arm64 gettext arm64 0.22.5-2 [1532 kB] Get: 27 http://deb.debian.org/debian trixie/main arm64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 28 http://deb.debian.org/debian trixie/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 29 http://deb.debian.org/debian trixie/main arm64 debhelper all 13.20 [915 kB] Fetched 19.4 MB in 0s (191 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20083 files and directories currently installed.) Preparing to unpack .../00-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../01-libmagic-mgc_1%3a5.45-3+b1_arm64.deb ... Unpacking libmagic-mgc (1:5.45-3+b1) ... Selecting previously unselected package libmagic1t64:arm64. Preparing to unpack .../02-libmagic1t64_1%3a5.45-3+b1_arm64.deb ... Unpacking libmagic1t64:arm64 (1:5.45-3+b1) ... Selecting previously unselected package file. Preparing to unpack .../03-file_1%3a5.45-3+b1_arm64.deb ... Unpacking file (1:5.45-3+b1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../04-gettext-base_0.22.5-2_arm64.deb ... Unpacking gettext-base (0.22.5-2) ... Selecting previously unselected package libuchardet0:arm64. Preparing to unpack .../05-libuchardet0_0.0.8-1+b2_arm64.deb ... Unpacking libuchardet0:arm64 (0.0.8-1+b2) ... Selecting previously unselected package groff-base. Preparing to unpack .../06-groff-base_1.23.0-6_arm64.deb ... Unpacking groff-base (1.23.0-6) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../07-bsdextrautils_2.40.2-12_arm64.deb ... Unpacking bsdextrautils (2.40.2-12) ... Selecting previously unselected package libpipeline1:arm64. Preparing to unpack .../08-libpipeline1_1.5.8-1_arm64.deb ... Unpacking libpipeline1:arm64 (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../09-man-db_2.13.0-1_arm64.deb ... Unpacking man-db (2.13.0-1) ... Selecting previously unselected package m4. Preparing to unpack .../10-m4_1.4.19-4_arm64.deb ... Unpacking m4 (1.4.19-4) ... Selecting previously unselected package autoconf. Preparing to unpack .../11-autoconf_2.72-3_all.deb ... Unpacking autoconf (2.72-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../12-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../13-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../14-autopoint_0.22.5-2_all.deb ... Unpacking autopoint (0.22.5-2) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../15-libdebhelper-perl_13.20_all.deb ... Unpacking libdebhelper-perl (13.20) ... Selecting previously unselected package libtool. Preparing to unpack .../16-libtool_2.4.7-8_all.deb ... Unpacking libtool (2.4.7-8) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../17-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../18-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../19-libfile-stripnondeterminism-perl_1.14.0-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.14.0-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../20-dh-strip-nondeterminism_1.14.0-1_all.deb ... Unpacking dh-strip-nondeterminism (1.14.0-1) ... Selecting previously unselected package libelf1t64:arm64. Preparing to unpack .../21-libelf1t64_0.192-4_arm64.deb ... Unpacking libelf1t64:arm64 (0.192-4) ... Selecting previously unselected package dwz. Preparing to unpack .../22-dwz_0.15-1+b1_arm64.deb ... Unpacking dwz (0.15-1+b1) ... Selecting previously unselected package libicu72:arm64. Preparing to unpack .../23-libicu72_72.1-5+b1_arm64.deb ... Unpacking libicu72:arm64 (72.1-5+b1) ... Selecting previously unselected package libxml2:arm64. Preparing to unpack .../24-libxml2_2.12.7+dfsg+really2.9.14-0.2+b1_arm64.deb ... Unpacking libxml2:arm64 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Selecting previously unselected package gettext. Preparing to unpack .../25-gettext_0.22.5-2_arm64.deb ... Unpacking gettext (0.22.5-2) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../26-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../27-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../28-debhelper_13.20_all.deb ... Unpacking debhelper (13.20) ... Setting up libpipeline1:arm64 (1.5.8-1) ... Setting up libicu72:arm64 (72.1-5+b1) ... Setting up bsdextrautils (2.40.2-12) ... Setting up libmagic-mgc (1:5.45-3+b1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.20) ... Setting up libmagic1t64:arm64 (1:5.45-3+b1) ... Setting up gettext-base (0.22.5-2) ... Setting up m4 (1.4.19-4) ... Setting up file (1:5.45-3+b1) ... Setting up libelf1t64:arm64 (0.192-4) ... Setting up autotools-dev (20220109.1) ... Setting up autopoint (0.22.5-2) ... Setting up autoconf (2.72-3) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.24) ... Setting up libuchardet0:arm64 (0.0.8-1+b2) ... Setting up libxml2:arm64 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up gettext (0.22.5-2) ... Setting up libtool (2.4.7-8) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up groff-base (1.23.0-6) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up debhelper (13.20) ... Processing triggers for libc-bin (2.40-4) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/dialign-2.2.1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../dialign_2.2.1-13_source.changes dpkg-buildpackage: info: source package dialign dpkg-buildpackage: info: source version 2.2.1-13 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Étienne Mollier dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 debian/rules clean dh clean debian/rules override_dh_clean make[1]: Entering directory '/build/reproducible-path/dialign-2.2.1' find src/ -name '*.o' -delete dh_clean src/dialign2-2 make[1]: Leaving directory '/build/reproducible-path/dialign-2.2.1' debian/rules binary dh binary dh_update_autotools_config dh_autoreconf debian/rules override_dh_auto_build make[1]: Entering directory '/build/reproducible-path/dialign-2.2.1' ## CFLAGS = -c -I-DCONS -O2 dh_auto_build --sourcedirectory=src cd src && make -j12 "INSTALL=install --strip-program=true" make[2]: Entering directory '/build/reproducible-path/dialign-2.2.1/src' gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dialign-2.2.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c -O -I-DCONS dialign.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dialign-2.2.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c -O -I-DCONS functions.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dialign-2.2.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c -O -I-DCONS para.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dialign-2.2.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c -O -I-DCONS output.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dialign-2.2.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c -O -I-DCONS wgt.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dialign-2.2.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c -O -I-DCONS anchor.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dialign-2.2.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c -O -I-DCONS regex.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dialign-2.2.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c -O -I-DCONS input.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dialign-2.2.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c -O -I-DCONS frag_chain.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dialign-2.2.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c -O -I-DCONS -Wdate-time -D_FORTIFY_SOURCE=2 -c -o alig_graph_closure.o alig_graph_closure.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dialign-2.2.1=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -c -O -I-DCONS -Wdate-time -D_FORTIFY_SOURCE=2 -c -o pratique.o pratique.c gcc dialign.o functions.o para.o output.o wgt.o anchor.o regex.o input.o frag_chain.o alig_graph_closure.o pratique.o -lm -o dialign2-2 -Wl,-z,relro -Wl,-z,now make[2]: Leaving directory '/build/reproducible-path/dialign-2.2.1/src' make[1]: Leaving directory '/build/reproducible-path/dialign-2.2.1' create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install --destdir=debian/dialign/ dh_install dh_installdocs dh_installchangelogs dh_installexamples dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 from: /lib/ld-linux-aarch64.so.1 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 to: /lib/ld-linux-aarch64.so.1.usr-is-merged dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'dialign' in '../dialign_2.2.1-13_arm64.deb'. dpkg-deb: building package 'dialign-dbgsym' in '../dialign-dbgsym_2.2.1-13_arm64.deb'. dpkg-genbuildinfo --build=binary -O../dialign_2.2.1-13_arm64.buildinfo dpkg-genchanges --build=binary -O../dialign_2.2.1-13_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/462841 and its subdirectories I: Current time: Tue Jan 13 17:27:58 -12 2026 I: pbuilder-time-stamp: 1768368478 Wed Dec 11 23:05:01 UTC 2024 I: 1st build successful. Starting 2nd build on remote node codethink01-arm64.debian.net. Wed Dec 11 23:05:01 UTC 2024 I: Preparing to do remote build '2' on codethink01-arm64.debian.net. Wed Dec 11 23:05:32 UTC 2024 I: Deleting $TMPDIR on codethink01-arm64.debian.net. Wed Dec 11 23:05:33 UTC 2024 I: dialign_2.2.1-13_arm64.changes: Format: 1.8 Date: Thu, 04 Jul 2024 22:25:10 +0200 Source: dialign Binary: dialign dialign-dbgsym Architecture: arm64 Version: 2.2.1-13 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Étienne Mollier Description: dialign - Segment-based multiple sequence alignment Closes: 1074909 Changes: dialign (2.2.1-13) unstable; urgency=medium . * d/control: declare compliance to standards version 4.7.0. * d/control: add myself to uploaders. * gcc-14.patch: new: fix implicit types flagged by gcc-14. (Closes: #1074909) Checksums-Sha1: bd17e4b2ec3277e6fd313b62aec9d5aca697e855 71144 dialign-dbgsym_2.2.1-13_arm64.deb 50cc7d0947063173cb75ffb92ffdd72d3125997f 5008 dialign_2.2.1-13_arm64.buildinfo f5f00e17bfab26e1dcb2f4558c32f2d2e8805225 136040 dialign_2.2.1-13_arm64.deb Checksums-Sha256: 5b806a22f7c4a67768a524e895497f89b3a7030623266f178ec74e66ecdfcd80 71144 dialign-dbgsym_2.2.1-13_arm64.deb c52902f7a390e123350890947b31f8688eadd2f5c7b3ad39286edee7fef0ff97 5008 dialign_2.2.1-13_arm64.buildinfo c369d331f515a67094c8172c8bc50bf5720e59d61e32b1b37c0520debd8f50d5 136040 dialign_2.2.1-13_arm64.deb Files: 1a725903203eb4e51fa84c9707352431 71144 debug optional dialign-dbgsym_2.2.1-13_arm64.deb 18c80e37cc22bb84405ab88ba7a669a9 5008 science optional dialign_2.2.1-13_arm64.buildinfo 33d8fb9a1d3675ae34be4b6a48584d46 136040 science optional dialign_2.2.1-13_arm64.deb Wed Dec 11 23:05:34 UTC 2024 I: diffoscope 284 will be used to compare the two builds: Running as unit: rb-diffoscope-arm64_5-73361.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.4nSkraBs/dialign_2.2.1-13.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.4nSkraBs/dialign_2.2.1-13.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.4nSkraBs/dialign_2.2.1-13.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.4nSkraBs/b1/dialign_2.2.1-13_arm64.changes /srv/reproducible-results/rbuild-debian/r-b-build.4nSkraBs/b2/dialign_2.2.1-13_arm64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.344s) 0.344s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.018s) 0.018s 12 calls diffoscope.comparators.binary.FilesystemFile ## specialize (total time: 0.000s) 0.000s 1 call specialize Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 654ms CPU time consumed: 654ms Wed Dec 11 23:05:35 UTC 2024 I: diffoscope 284 found no differences in the changes files, and a .buildinfo file also exists. Wed Dec 11 23:05:35 UTC 2024 I: dialign from trixie built successfully and reproducibly on arm64. Wed Dec 11 23:05:36 UTC 2024 I: Submitting .buildinfo files to external archives: Wed Dec 11 23:05:36 UTC 2024 I: Submitting 8.0K b1/dialign_2.2.1-13_arm64.buildinfo.asc Wed Dec 11 23:05:37 UTC 2024 I: Submitting 8.0K b2/dialign_2.2.1-13_arm64.buildinfo.asc Wed Dec 11 23:05:38 UTC 2024 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Wed Dec 11 23:05:38 UTC 2024 I: Done submitting .buildinfo files. Wed Dec 11 23:05:38 UTC 2024 I: Removing signed dialign_2.2.1-13_arm64.buildinfo.asc files: removed './b1/dialign_2.2.1-13_arm64.buildinfo.asc' removed './b2/dialign_2.2.1-13_arm64.buildinfo.asc'