Sat May 11 10:15:32 UTC 2024 I: starting to build seqan-needle/trixie/amd64 on jenkins on '2024-05-11 10:15' Sat May 11 10:15:32 UTC 2024 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/amd64_23/19532/console.log Sat May 11 10:15:32 UTC 2024 I: Downloading source for trixie/seqan-needle=1.0.2+ds-2 --2024-05-11 10:15:33-- http://deb.debian.org/debian/pool/main/s/seqan-needle/seqan-needle_1.0.2%2bds-2.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2275 (2.2K) [text/prs.lines.tag] Saving to: ‘seqan-needle_1.0.2+ds-2.dsc’ 0K .. 100% 304M=0s 2024-05-11 10:15:33 (304 MB/s) - ‘seqan-needle_1.0.2+ds-2.dsc’ saved [2275/2275] Sat May 11 10:15:33 UTC 2024 I: seqan-needle_1.0.2+ds-2.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: seqan-needle Binary: seqan-needle, seqan-needle-doc Architecture: any all Version: 1.0.2+ds-2 Maintainer: Debian Med Packaging Team Uploaders: Michael R. Crusoe Homepage: https://github.com/seqan/needle Standards-Version: 4.6.2 Vcs-Browser: https://salsa.debian.org/med-team/seqan-needle Vcs-Git: https://salsa.debian.org/med-team/seqan-needle.git Testsuite: autopkgtest Testsuite-Triggers: build-essential, cmake, libcereal-dev, libgtest-dev, libseqan3-dev Build-Depends: debhelper-compat (= 13), cmake, libseqan3-dev (>= 3.2.0+ds-5), libgtest-dev, libcereal-dev, pkg-config, doxygen Package-List: seqan-needle deb science optional arch=any seqan-needle-doc deb doc optional arch=all Checksums-Sha1: 2314b18283afd2cfdefd3500c150af168a70f4d2 5049372 seqan-needle_1.0.2+ds.orig.tar.xz 6c11c15e899e769a14a821e6fd7c251c9fa21aeb 6484 seqan-needle_1.0.2+ds-2.debian.tar.xz Checksums-Sha256: 28936c5bdfced7b09ac95459196d90a7a16a8b058f3bd18e552558a12f68ea5a 5049372 seqan-needle_1.0.2+ds.orig.tar.xz e3c577eeb7b5744343c6524afbda73b46b692f8083c2245798a31c331bc67dd6 6484 seqan-needle_1.0.2+ds-2.debian.tar.xz Files: 25b030304d451610574aac31b59fe16d 5049372 seqan-needle_1.0.2+ds.orig.tar.xz 4f170525b9a513630be60e2b56495319 6484 seqan-needle_1.0.2+ds-2.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJCBAEBCgAsFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAmWcRRMOHHRpbGxlYUBy a2kuZGUACgkQV4oElNHGRtGAIw/+J+q8HnYBG75m4E3gIxL4ALhQODZgOpwaAqEc D8qJC5hy/odo1F4TqSm7m8EdeuYz4lLLKhV3OWrSFuRkYoK16QjUrMisQLXaJutb KIGuN6NjzAgSfU3B4bdbS/0mjozYHU/kmTng23VFHQbEGfASl4Lfnm51URw2skpE WXjv5uCO8IXTioutrr5nixhVSdX04Hh5bF8ozo55H+5bPgH8pDWJpqq0y7we+9ja ZrjtMlIijMLZ4THDOVhBOygNqw+kdDc2B612ZAI1OIIx58dwNL+vGKFFQZtCcqMZ VOuLszCuRAxaZJ38ib++kkVBILg5glhzCWKEqrTHJoeecyVFa4ZvGvzuD8rIU9jk YwOEVXh/KpyDqYG16EjHyH6lfMX79uABWGMYF2TRngNFHPV668Q2Sk9l9FX4qOwS 2plx9Gu4We36PK5iBTB06ZhTU6wTkkLekwLUV5RmpBGad9jAmSE+FjfhumBUm4AI +cHGt0WC+eFR+WkFhbp9Iz7rMt2Y3dMolyYjI8wZIQHTp4ljZwkFibg619N2+6xs 8GftbJWiKYq645FH1p22pVqDafN6JtgPHsFGTTYh1qFlH+m8ijkDp4hvllXksmKa 69ipTSgTAbR+acVrWJbTokb6A413oDqm3WCeFD+QmpZt4Pq39/uDf+bFvs/BCN3f xGa83wI= =aDLd -----END PGP SIGNATURE----- Sat May 11 10:15:33 UTC 2024 I: Checking whether the package is not for us Sat May 11 10:15:33 UTC 2024 I: Starting 1st build on remote node ionos11-amd64.debian.net. Sat May 11 10:15:33 UTC 2024 I: Preparing to do remote build '1' on ionos11-amd64.debian.net. Sat May 11 10:45:10 UTC 2024 I: Deleting $TMPDIR on ionos11-amd64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Fri May 10 22:15:35 -12 2024 I: pbuilder-time-stamp: 1715422536 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [seqan-needle_1.0.2+ds-2.dsc] I: copying [./seqan-needle_1.0.2+ds.orig.tar.xz] I: copying [./seqan-needle_1.0.2+ds-2.debian.tar.xz] I: Extracting source gpgv: Signature made Mon Jan 8 18:55:15 2024 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tillea@rki.de" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./seqan-needle_1.0.2+ds-2.dsc: no acceptable signature found dpkg-source: info: extracting seqan-needle in seqan-needle-1.0.2+ds dpkg-source: info: unpacking seqan-needle_1.0.2+ds.orig.tar.xz dpkg-source: info: unpacking seqan-needle_1.0.2+ds-2.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying 743f0c2db4ed59aeb6b76744aa8485f208b9f9d2.patch dpkg-source: info: applying privacy dpkg-source: info: applying debian_seqan3 dpkg-source: info: applying create_doc_without_previous_binary_build.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/2525188/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='amd64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=20 ' DISTRIBUTION='trixie' HOME='/root' HOST_ARCH='amd64' IFS=' ' INVOCATION_ID='8381411e1fa240cf8731f736afdbdcbd' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='2525188' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.QBF952Fg/pbuilderrc_ralY --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.QBF952Fg/b1 --logfile b1/build.log seqan-needle_1.0.2+ds-2.dsc' SUDO_GID='111' SUDO_UID='106' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://46.16.76.132:3128' I: uname -a Linux ionos11-amd64 6.1.0-21-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.90-1 (2024-05-03) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 May 10 11:25 /bin -> usr/bin I: user script /srv/workspace/pbuilder/2525188/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), cmake, libseqan3-dev (>= 3.2.0+ds-5), libgtest-dev, libcereal-dev, pkg-config, doxygen dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19699 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on cmake; however: Package cmake is not installed. pbuilder-satisfydepends-dummy depends on libseqan3-dev (>= 3.2.0+ds-5); however: Package libseqan3-dev is not installed. pbuilder-satisfydepends-dummy depends on libgtest-dev; however: Package libgtest-dev is not installed. pbuilder-satisfydepends-dummy depends on libcereal-dev; however: Package libcereal-dev is not installed. pbuilder-satisfydepends-dummy depends on pkg-config; however: Package pkg-config is not installed. pbuilder-satisfydepends-dummy depends on doxygen; however: Package doxygen is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} cmake{a} cmake-data{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} doxygen{a} dwz{a} file{a} gettext{a} gettext-base{a} googletest{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libarchive13t64{a} libbrotli1{a} libbsd0{a} libbz2-dev{a} libcereal-dev{a} libclang-cpp16t64{a} libclang1-16t64{a} libcom-err2{a} libcurl4t64{a} libdebhelper-perl{a} libedit2{a} libelf1t64{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libfmt9{a} libgssapi-krb5-2{a} libgtest-dev{a} libicu72{a} libjsoncpp25{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} libldap-2.5-0{a} libllvm16t64{a} libmagic-mgc{a} libmagic1t64{a} libnghttp2-14{a} libpipeline1{a} libpkgconf3{a} libproc2-0{a} libpsl5t64{a} librhash0{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libseqan3-dev{a} libssh2-1t64{a} libsub-override-perl{a} libtool{a} libuchardet0{a} libuv1t64{a} libxml2{a} libz3-4{a} m4{a} man-db{a} pkg-config{a} pkgconf{a} pkgconf-bin{a} po-debconf{a} procps{a} rapidjson-dev{a} sensible-utils{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: bzip2-doc ca-certificates curl krb5-locales libarchive-cpio-perl libldap-common libltdl-dev libmail-sendmail-perl libsasl2-modules lynx psmisc publicsuffix wget 0 packages upgraded, 73 newly installed, 0 to remove and 0 not upgraded. Need to get 92.4 MB of archives. After unpacking 416 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main amd64 libproc2-0 amd64 2:4.0.4-4 [64.6 kB] Get: 2 http://deb.debian.org/debian trixie/main amd64 procps amd64 2:4.0.4-4 [880 kB] Get: 3 http://deb.debian.org/debian trixie/main amd64 sensible-utils all 0.0.22 [22.4 kB] Get: 4 http://deb.debian.org/debian trixie/main amd64 libmagic-mgc amd64 1:5.45-3 [314 kB] Get: 5 http://deb.debian.org/debian trixie/main amd64 libmagic1t64 amd64 1:5.45-3 [105 kB] Get: 6 http://deb.debian.org/debian trixie/main amd64 file amd64 1:5.45-3 [42.9 kB] Get: 7 http://deb.debian.org/debian trixie/main amd64 gettext-base amd64 0.21-14+b1 [161 kB] Get: 8 http://deb.debian.org/debian trixie/main amd64 libuchardet0 amd64 0.0.8-1+b1 [68.8 kB] Get: 9 http://deb.debian.org/debian trixie/main amd64 groff-base amd64 1.23.0-4 [1180 kB] Get: 10 http://deb.debian.org/debian trixie/main amd64 bsdextrautils amd64 2.40-8 [92.8 kB] Get: 11 http://deb.debian.org/debian trixie/main amd64 libpipeline1 amd64 1.5.7-2 [38.0 kB] Get: 12 http://deb.debian.org/debian trixie/main amd64 man-db amd64 2.12.1-1 [1411 kB] Get: 13 http://deb.debian.org/debian trixie/main amd64 m4 amd64 1.4.19-4 [287 kB] Get: 14 http://deb.debian.org/debian trixie/main amd64 autoconf all 2.71-3 [332 kB] Get: 15 http://deb.debian.org/debian trixie/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get: 16 http://deb.debian.org/debian trixie/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get: 17 http://deb.debian.org/debian trixie/main amd64 autopoint all 0.21-14 [496 kB] Get: 18 http://deb.debian.org/debian trixie/main amd64 libicu72 amd64 72.1-4+b1 [9395 kB] Get: 19 http://deb.debian.org/debian trixie/main amd64 libxml2 amd64 2.9.14+dfsg-1.3+b3 [692 kB] Get: 20 http://deb.debian.org/debian trixie/main amd64 libarchive13t64 amd64 3.7.2-2 [346 kB] Get: 21 http://deb.debian.org/debian trixie/main amd64 libbrotli1 amd64 1.1.0-2+b3 [305 kB] Get: 22 http://deb.debian.org/debian trixie/main amd64 libkrb5support0 amd64 1.20.1-6+b1 [33.3 kB] Get: 23 http://deb.debian.org/debian trixie/main amd64 libcom-err2 amd64 1.47.1~rc2-1 [22.6 kB] Get: 24 http://deb.debian.org/debian trixie/main amd64 libk5crypto3 amd64 1.20.1-6+b1 [79.8 kB] Get: 25 http://deb.debian.org/debian trixie/main amd64 libkeyutils1 amd64 1.6.3-3 [8952 B] Get: 26 http://deb.debian.org/debian trixie/main amd64 libkrb5-3 amd64 1.20.1-6+b1 [333 kB] Get: 27 http://deb.debian.org/debian trixie/main amd64 libgssapi-krb5-2 amd64 1.20.1-6+b1 [135 kB] Get: 28 http://deb.debian.org/debian trixie/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg1-6 [19.5 kB] Get: 29 http://deb.debian.org/debian trixie/main amd64 libsasl2-2 amd64 2.1.28+dfsg1-6 [56.9 kB] Get: 30 http://deb.debian.org/debian trixie/main amd64 libldap-2.5-0 amd64 2.5.17+dfsg-1 [186 kB] Get: 31 http://deb.debian.org/debian trixie/main amd64 libnghttp2-14 amd64 1.61.0-1+b1 [75.6 kB] Get: 32 http://deb.debian.org/debian trixie/main amd64 libpsl5t64 amd64 0.21.2-1.1 [56.8 kB] Get: 33 http://deb.debian.org/debian trixie/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b4 [58.5 kB] Get: 34 http://deb.debian.org/debian trixie/main amd64 libssh2-1t64 amd64 1.11.0-4.1+b2 [215 kB] Get: 35 http://deb.debian.org/debian trixie/main amd64 libcurl4t64 amd64 8.7.1-5 [441 kB] Get: 36 http://deb.debian.org/debian trixie/main amd64 libexpat1 amd64 2.6.2-1 [103 kB] Get: 37 http://deb.debian.org/debian trixie/main amd64 libjsoncpp25 amd64 1.9.5-6+b2 [81.9 kB] Get: 38 http://deb.debian.org/debian trixie/main amd64 librhash0 amd64 1.4.3-3+b1 [132 kB] Get: 39 http://deb.debian.org/debian trixie/main amd64 libuv1t64 amd64 1.48.0-1.1 [147 kB] Get: 40 http://deb.debian.org/debian trixie/main amd64 cmake-data all 3.29.2-2 [2167 kB] Get: 41 http://deb.debian.org/debian trixie/main amd64 cmake amd64 3.29.2-2 [10.7 MB] Get: 42 http://deb.debian.org/debian trixie/main amd64 libdebhelper-perl all 13.15.3 [88.0 kB] Get: 43 http://deb.debian.org/debian trixie/main amd64 libtool all 2.4.7-7 [517 kB] Get: 44 http://deb.debian.org/debian trixie/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 45 http://deb.debian.org/debian trixie/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 46 http://deb.debian.org/debian trixie/main amd64 libsub-override-perl all 0.10-1 [10.6 kB] Get: 47 http://deb.debian.org/debian trixie/main amd64 libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get: 48 http://deb.debian.org/debian trixie/main amd64 dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get: 49 http://deb.debian.org/debian trixie/main amd64 libelf1t64 amd64 0.191-1+b1 [189 kB] Get: 50 http://deb.debian.org/debian trixie/main amd64 dwz amd64 0.15-1+b1 [110 kB] Get: 51 http://deb.debian.org/debian trixie/main amd64 gettext amd64 0.21-14+b1 [1301 kB] Get: 52 http://deb.debian.org/debian trixie/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 53 http://deb.debian.org/debian trixie/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 54 http://deb.debian.org/debian trixie/main amd64 debhelper all 13.15.3 [901 kB] Get: 55 http://deb.debian.org/debian trixie/main amd64 libbsd0 amd64 0.12.2-1 [131 kB] Get: 56 http://deb.debian.org/debian trixie/main amd64 libedit2 amd64 3.1-20230828-1+b1 [93.5 kB] Get: 57 http://deb.debian.org/debian trixie/main amd64 libz3-4 amd64 4.8.12-3.1+b2 [7346 kB] Get: 58 http://deb.debian.org/debian trixie/main amd64 libllvm16t64 amd64 1:16.0.6-27 [23.1 MB] Get: 59 http://deb.debian.org/debian trixie/main amd64 libclang-cpp16t64 amd64 1:16.0.6-27 [11.5 MB] Get: 60 http://deb.debian.org/debian trixie/main amd64 libclang1-16t64 amd64 1:16.0.6-27 [6581 kB] Get: 61 http://deb.debian.org/debian trixie/main amd64 libfmt9 amd64 9.1.0+ds1-2 [113 kB] Get: 62 http://deb.debian.org/debian trixie/main amd64 doxygen amd64 1.9.8+ds-2+b1 [4913 kB] Get: 63 http://deb.debian.org/debian trixie/main amd64 googletest all 1.14.0-1 [512 kB] Get: 64 http://deb.debian.org/debian trixie/main amd64 libbz2-dev amd64 1.0.8-5.1 [31.3 kB] Get: 65 http://deb.debian.org/debian trixie/main amd64 rapidjson-dev all 1.1.0+dfsg2-7.2 [97.8 kB] Get: 66 http://deb.debian.org/debian trixie/main amd64 libcereal-dev amd64 1.3.2+dfsg-5 [221 kB] Get: 67 http://deb.debian.org/debian trixie/main amd64 libgtest-dev amd64 1.14.0-1+b1 [250 kB] Get: 68 http://deb.debian.org/debian trixie/main amd64 libpkgconf3 amd64 1.8.1-1+b2 [36.4 kB] Get: 69 http://deb.debian.org/debian trixie/main amd64 zlib1g-dev amd64 1:1.3.dfsg-3.1 [918 kB] Get: 70 http://deb.debian.org/debian trixie/main amd64 libseqan3-dev all 3.3.0+ds-1 [758 kB] Get: 71 http://deb.debian.org/debian trixie/main amd64 pkgconf-bin amd64 1.8.1-1+b2 [29.7 kB] Get: 72 http://deb.debian.org/debian trixie/main amd64 pkgconf amd64 1.8.1-1+b2 [26.2 kB] Get: 73 http://deb.debian.org/debian trixie/main amd64 pkg-config amd64 1.8.1-1+b2 [14.0 kB] Fetched 92.4 MB in 4s (26.1 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libproc2-0:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19699 files and directories currently installed.) Preparing to unpack .../00-libproc2-0_2%3a4.0.4-4_amd64.deb ... Unpacking libproc2-0:amd64 (2:4.0.4-4) ... Selecting previously unselected package procps. Preparing to unpack .../01-procps_2%3a4.0.4-4_amd64.deb ... Unpacking procps (2:4.0.4-4) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../02-sensible-utils_0.0.22_all.deb ... 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Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.13.1-1) ... Setting up gettext (0.21-14+b1) ... Setting up libgtest-dev:amd64 (1.14.0-1+b1) ... Setting up libtool (2.4.7-7) ... Setting up libedit2:amd64 (3.1-20230828-1+b1) ... Setting up libcereal-dev (1.3.2+dfsg-5) ... Setting up libldap-2.5-0:amd64 (2.5.17+dfsg-1) ... Setting up pkgconf:amd64 (1.8.1-1+b2) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up libllvm16t64:amd64 (1:16.0.6-27) ... Setting up dh-autoreconf (20) ... Setting up libgssapi-krb5-2:amd64 (1.20.1-6+b1) ... Setting up pkg-config:amd64 (1.8.1-1+b2) ... Setting up dh-strip-nondeterminism (1.13.1-1) ... Setting up groff-base (1.23.0-4) ... Setting up libarchive13t64:amd64 (3.7.2-2) ... Setting up libcurl4t64:amd64 (8.7.1-5) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libseqan3-dev (3.3.0+ds-1) ... 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Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/seqan-needle-1.0.2+ds/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../seqan-needle_1.0.2+ds-2_source.changes dpkg-buildpackage: info: source package seqan-needle dpkg-buildpackage: info: source version 1.0.2+ds-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Komolehin Israel Timilehin dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf debian/rules override_dh_auto_configure make[1]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds' rm -Rf lib/seqan3 dh_auto_configure -- -DSEQAN3_NO_LEMON=OFF cd obj-x86_64-linux-gnu && DEB_PYTHON_INSTALL_LAYOUT=deb cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/x86_64-linux-gnu -DSEQAN3_NO_LEMON=OFF .. -- The C compiler identification is GNU 13.2.0 -- The CXX compiler identification is GNU 13.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Found OpenMP_C: -fopenmp (found version "4.5") -- Found OpenMP_CXX: -fopenmp (found version "4.5") -- Found OpenMP: TRUE (found version "4.5") -- You can run `make` to build the application. -- Found Doxygen: /usr/bin/doxygen -- You can run `make doc` to build api documentation. -- You can run `make test` to build and run tests. -- Configuring done (30.5s) -- Generating done (0.1s) CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY CMAKE_INSTALL_LIBDIR CMAKE_INSTALL_LOCALSTATEDIR CMAKE_INSTALL_RUNSTATEDIR CMAKE_INSTALL_SYSCONFDIR FETCHCONTENT_FULLY_DISCONNECTED SEQAN3_NO_LEMON -- Build files have been written to: /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu make[1]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds' debian/rules override_dh_auto_build-arch make[1]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds' dh_auto_build --arch cd obj-x86_64-linux-gnu && make -j20 "INSTALL=install --strip-program=true" VERBOSE=1 make[2]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/seqan-needle-1.0.2+ds -B/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/CMakeFiles /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[3]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' make -f src/CMakeFiles/needle_lib.dir/build.make src/CMakeFiles/needle_lib.dir/depend make[4]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-needle-1.0.2+ds /build/reproducible-path/seqan-needle-1.0.2+ds/src /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/src /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/src/CMakeFiles/needle_lib.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' make -f src/CMakeFiles/needle_lib.dir/build.make src/CMakeFiles/needle_lib.dir/build make[4]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' [ 20%] Building CXX object src/CMakeFiles/needle_lib.dir/ibf.cpp.o cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/src && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/build/reproducible-path/seqan-needle-1.0.2+ds/src/../include -I/build/reproducible-path/seqan-needle-1.0.2+ds/lib/robin-hood-hashing/src/include -isystem /usr/include/seqan3/submodules/sdsl-lite/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.2+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++20 -fopenmp -MD -MT src/CMakeFiles/needle_lib.dir/ibf.cpp.o -MF CMakeFiles/needle_lib.dir/ibf.cpp.o.d -o CMakeFiles/needle_lib.dir/ibf.cpp.o -c /build/reproducible-path/seqan-needle-1.0.2+ds/src/ibf.cpp [ 40%] Building CXX object src/CMakeFiles/needle_lib.dir/estimate.cpp.o cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/src && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/build/reproducible-path/seqan-needle-1.0.2+ds/src/../include -I/build/reproducible-path/seqan-needle-1.0.2+ds/lib/robin-hood-hashing/src/include -isystem /usr/include/seqan3/submodules/sdsl-lite/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.2+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++20 -fopenmp -MD -MT src/CMakeFiles/needle_lib.dir/estimate.cpp.o -MF CMakeFiles/needle_lib.dir/estimate.cpp.o.d -o CMakeFiles/needle_lib.dir/estimate.cpp.o -c /build/reproducible-path/seqan-needle-1.0.2+ds/src/estimate.cpp /build/reproducible-path/seqan-needle-1.0.2+ds/src/ibf.cpp: In function ‘void fill_hash_table_parallel(const min_arguments&, seqan3::sequence_file_input >&, robin_hood::unordered_node_map&, robin_hood::unordered_node_map&, robin_hood::unordered_set&, robin_hood::unordered_set&, bool, uint8_t)’: /build/reproducible-path/seqan-needle-1.0.2+ds/src/ibf.cpp:242:38: warning: narrowing conversion of ‘thread_count’ from ‘size_t’ {aka ‘long unsigned int’} to ‘ptrdiff_t’ {aka ‘long int’} [-Wnarrowing] 242 | seqan3::detail::latch sync_point{thread_count}; | ^~~~~~~~~~~~ /build/reproducible-path/seqan-needle-1.0.2+ds/src/ibf.cpp:243:40: warning: narrowing conversion of ‘thread_count’ from ‘size_t’ {aka ‘long unsigned int’} to ‘ptrdiff_t’ {aka ‘long int’} [-Wnarrowing] 243 | seqan3::detail::latch sync_point_2{thread_count}; | ^~~~~~~~~~~~ [ 60%] Linking CXX static library ../lib/libneedle_lib.a cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/src && /usr/bin/cmake -P CMakeFiles/needle_lib.dir/cmake_clean_target.cmake cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/needle_lib.dir/link.txt --verbose=1 /usr/bin/ar qc ../lib/libneedle_lib.a CMakeFiles/needle_lib.dir/ibf.cpp.o CMakeFiles/needle_lib.dir/estimate.cpp.o /usr/bin/ranlib ../lib/libneedle_lib.a make[4]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' [ 60%] Built target needle_lib make -f src/CMakeFiles/needle.dir/build.make src/CMakeFiles/needle.dir/depend make[4]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-needle-1.0.2+ds /build/reproducible-path/seqan-needle-1.0.2+ds/src /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/src /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/src/CMakeFiles/needle.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' make -f src/CMakeFiles/needle.dir/build.make src/CMakeFiles/needle.dir/build make[4]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' [ 80%] Building CXX object src/CMakeFiles/needle.dir/main.cpp.o cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/src && /usr/bin/c++ -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/build/reproducible-path/seqan-needle-1.0.2+ds/src/../include -I/build/reproducible-path/seqan-needle-1.0.2+ds/lib/robin-hood-hashing/src/include -isystem /usr/include/seqan3/submodules/sdsl-lite/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.2+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++20 -fopenmp -MD -MT src/CMakeFiles/needle.dir/main.cpp.o -MF CMakeFiles/needle.dir/main.cpp.o.d -o CMakeFiles/needle.dir/main.cpp.o -c /build/reproducible-path/seqan-needle-1.0.2+ds/src/main.cpp [100%] Linking CXX executable ../bin/needle cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/needle.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.2+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now CMakeFiles/needle.dir/main.cpp.o -o ../bin/needle ../lib/libneedle_lib.a /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so -lrt /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a make[4]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' [100%] Built target needle make[3]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/CMakeFiles 0 make[2]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' obj-*/bin/needle --export-help man > debian/needle.1 obj-*/bin/needle count --export-help man > debian/needle-count.1 obj-*/bin/needle estimate --export-help man > debian/needle-estimate.1 obj-*/bin/needle ibf --export-help man > debian/needle-ibf.1 obj-*/bin/needle minimiser --export-help man > debian/needle-minimiser.1 make[1]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds' debian/rules override_dh_auto_build-indep make[1]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds' doxygen doc/doxygen_cfg warning: Tag 'HTML_TIMESTAMP' at line 220 of file 'doc/doxygen_cfg' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'FORMULA_TRANSPARENT' at line 256 of file 'doc/doxygen_cfg' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'LATEX_TIMESTAMP' at line 291 of file 'doc/doxygen_cfg' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'DOT_FONTNAME' at line 360 of file 'doc/doxygen_cfg' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'DOT_FONTSIZE' at line 361 of file 'doc/doxygen_cfg' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'DOT_TRANSPARENT' at line 389 of file 'doc/doxygen_cfg' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: tag INCLUDE_PATH: include path '${CMAKE_SOURCE_DIR}/include' does not exist warning: source '${CMAKE_SOURCE_DIR}/include' is not a readable file or directory... skipping. Doxygen version used: 1.9.8 Searching for include files... Searching for example files... Searching for images... Searching for dot files... Searching for msc files... Searching for dia files... Searching for files to exclude Searching INPUT for files to process... Searching for files in directory /build/reproducible-path/seqan-needle-1.0.2+ds/include Searching for files in directory /build/reproducible-path/seqan-needle-1.0.2+ds/src Reading and parsing tag files Parsing files Preprocessing /build/reproducible-path/seqan-needle-1.0.2+ds/include/estimate.h... Parsing file /build/reproducible-path/seqan-needle-1.0.2+ds/include/estimate.h... Preprocessing /build/reproducible-path/seqan-needle-1.0.2+ds/include/ibf.h... Parsing file /build/reproducible-path/seqan-needle-1.0.2+ds/include/ibf.h... Preprocessing /build/reproducible-path/seqan-needle-1.0.2+ds/include/shared.h... Parsing file /build/reproducible-path/seqan-needle-1.0.2+ds/include/shared.h... Preprocessing /build/reproducible-path/seqan-needle-1.0.2+ds/src/CMakeLists.txt... Parsing file /build/reproducible-path/seqan-needle-1.0.2+ds/src/CMakeLists.txt... Preprocessing /build/reproducible-path/seqan-needle-1.0.2+ds/src/estimate.cpp... Parsing file /build/reproducible-path/seqan-needle-1.0.2+ds/src/estimate.cpp... Preprocessing /build/reproducible-path/seqan-needle-1.0.2+ds/src/ibf.cpp... Parsing file /build/reproducible-path/seqan-needle-1.0.2+ds/src/ibf.cpp... Preprocessing /build/reproducible-path/seqan-needle-1.0.2+ds/src/main.cpp... Parsing file /build/reproducible-path/seqan-needle-1.0.2+ds/src/main.cpp... Reading /build/reproducible-path/seqan-needle-1.0.2+ds/LICENSE.md... Building macro definition list... Building group list... Building directory list... Building namespace list... Building file list... Building class list... Building concept list... Computing nesting relations for classes... Associating documentation with classes... Associating documentation with concepts... Associating documentation with modules... Building example list... Searching for enumerations... Searching for documented typedefs... Searching for members imported via using declarations... Searching for included using directives... Searching for documented variables... Building interface member list... Building member list... Searching for friends... Searching for documented defines... Computing class inheritance relations... Computing class usage relations... Flushing cached template relations that have become invalid... Computing class relations... Add enum values to enums... Searching for member function documentation... Creating members for template instances... Building page list... Search for main page... Computing page relations... Determining the scope of groups... Computing module relations... Sorting lists... Determining which enums are documented Computing member relations... Building full member lists recursively... Adding members to member groups. Computing member references... Inheriting documentation... Generating disk names... Adding source references... Adding xrefitems... Sorting member lists... Setting anonymous enum type... Computing dependencies between directories... Generating citations page... Counting members... Counting data structures... Resolving user defined references... Finding anchors and sections in the documentation... Transferring function references... Combining using relations... Adding members to index pages... Correcting members for VHDL... Computing tooltip texts... Generating style sheet... Generating search indices... Generating example documentation... Generating file sources... Generating code for file /build/reproducible-path/seqan-needle-1.0.2+ds/include/estimate.h... Generating code for file /build/reproducible-path/seqan-needle-1.0.2+ds/include/ibf.h... Generating code for file /build/reproducible-path/seqan-needle-1.0.2+ds/include/shared.h... Generating file documentation... Generating docs for file /build/reproducible-path/seqan-needle-1.0.2+ds/include/estimate.h... Generating docs for file /build/reproducible-path/seqan-needle-1.0.2+ds/include/ibf.h... Generating docs for file /build/reproducible-path/seqan-needle-1.0.2+ds/include/shared.h... Generating docs for file /build/reproducible-path/seqan-needle-1.0.2+ds/LICENSE.md... Generating docs for file /build/reproducible-path/seqan-needle-1.0.2+ds/src/CMakeLists.txt... Generating docs for file /build/reproducible-path/seqan-needle-1.0.2+ds/src/estimate.cpp... Generating docs for file /build/reproducible-path/seqan-needle-1.0.2+ds/src/ibf.cpp... Generating docs for file /build/reproducible-path/seqan-needle-1.0.2+ds/src/main.cpp... Generating page documentation... Generating docs for page md__2build_2reproducible-path_2seqan-needle-1_80_82_09ds_2_l_i_c_e_n_s_e... Generating group documentation... Generating class documentation... Generating docs for compound all_arguments... Generating docs for compound estimate_arguments... Generating docs for compound estimate_ibf_arguments... Generating docs for compound min_arguments... Generating docs for compound minimiser_arguments... Generating docs for compound my_traits... Generating docs for compound RandomGenerator... Generating concept documentation... Generating module documentation... Generating namespace documentation... Generating graph info page... Generating directory documentation... Generating index page... Generating page index... Generating topic index... Generating module index... Generating module member index... Generating namespace index... Generating namespace member index... Generating concept index... Generating annotated compound index... Generating alphabetical compound index... Generating hierarchical class index... Generating member index... Generating file index... Generating file member index... Generating example index... finalizing index lists... writing tag file... Running plantuml with JAVA... type lookup cache used 125/65536 hits=272 misses=132 symbol lookup cache used 135/65536 hits=325 misses=135 finished... make[1]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds' debian/rules override_dh_auto_test-indep make[1]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds' echo "Do Nothing" Do Nothing make[1]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds' dh_auto_test -Nseqan-needle-doc cd obj-x86_64-linux-gnu && make -j20 test ARGS\+=--verbose ARGS\+=-j20 make[1]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' Running tests... /usr/bin/ctest --force-new-ctest-process --verbose -j20 UpdateCTestConfiguration from :/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/DartConfiguration.tcl UpdateCTestConfiguration from :/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/DartConfiguration.tcl Test project /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu Constructing a list of tests Change Dir: '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test' Run Build Command(s): /usr/bin/cmake -E env VERBOSE=1 /usr/bin/gmake -f Makefile api_test gmake[2]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test' gmake[2]: warning: jobserver unavailable: using -j1. Add '+' to parent make rule. cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu && /usr/bin/gmake -f CMakeFiles/Makefile2 test/CMakeFiles/api_test.dir/rule gmake[3]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/seqan-needle-1.0.2+ds -B/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/CMakeFiles 15 /usr/bin/gmake -f CMakeFiles/Makefile2 test/CMakeFiles/api_test.dir/all gmake[4]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' /usr/bin/gmake -f src/CMakeFiles/needle_lib.dir/build.make src/CMakeFiles/needle_lib.dir/depend gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-needle-1.0.2+ds /build/reproducible-path/seqan-needle-1.0.2+ds/src /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/src /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/src/CMakeFiles/needle_lib.dir/DependInfo.cmake "--color=" Dependencies file "src/CMakeFiles/needle_lib.dir/estimate.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/src/CMakeFiles/needle_lib.dir/compiler_depend.internal". Dependencies file "src/CMakeFiles/needle_lib.dir/ibf.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/src/CMakeFiles/needle_lib.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target needle_lib gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' /usr/bin/gmake -f src/CMakeFiles/needle_lib.dir/build.make src/CMakeFiles/needle_lib.dir/build gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' gmake[5]: Nothing to be done for 'src/CMakeFiles/needle_lib.dir/build'. gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' [ 20%] Built target needle_lib /usr/bin/gmake -f test/api/CMakeFiles/minimiser_test.dir/build.make test/api/CMakeFiles/minimiser_test.dir/depend gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-needle-1.0.2+ds /build/reproducible-path/seqan-needle-1.0.2+ds/test/api /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/api /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/api/CMakeFiles/minimiser_test.dir/DependInfo.cmake "--color=" gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' /usr/bin/gmake -f test/api/CMakeFiles/minimiser_test.dir/build.make test/api/CMakeFiles/minimiser_test.dir/build gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' [ 26%] Building CXX object test/api/CMakeFiles/minimiser_test.dir/minimiser_test.cpp.o cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/api && /usr/bin/c++ -DBINDIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/bin/\" -DDATADIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/data/\" -DDATA_INPUT_DIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/test/data/\" -DOUTPUTDIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/output/\" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/build/reproducible-path/seqan-needle-1.0.2+ds/test/api/SEQAN3_CLONE_DIR-NOTFOUND/test/include -I/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/vendor/googletest/googletest/include -I/build/reproducible-path/seqan-needle-1.0.2+ds/src/../include -I/build/reproducible-path/seqan-needle-1.0.2+ds/lib/robin-hood-hashing/src/include -isystem /usr/include/seqan3/submodules/sdsl-lite/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.2+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++20 -fopenmp -MD -MT test/api/CMakeFiles/minimiser_test.dir/minimiser_test.cpp.o -MF CMakeFiles/minimiser_test.dir/minimiser_test.cpp.o.d -o CMakeFiles/minimiser_test.dir/minimiser_test.cpp.o -c /build/reproducible-path/seqan-needle-1.0.2+ds/test/api/minimiser_test.cpp [ 33%] Linking CXX executable minimiser_test cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/api && /usr/bin/cmake -E cmake_link_script CMakeFiles/minimiser_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.2+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now CMakeFiles/minimiser_test.dir/minimiser_test.cpp.o -o minimiser_test ../../lib/libneedle_lib.a -lgtest -lgtest_main /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so -lrt /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' [ 33%] Built target minimiser_test /usr/bin/gmake -f test/api/CMakeFiles/count_test.dir/build.make test/api/CMakeFiles/count_test.dir/depend gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-needle-1.0.2+ds /build/reproducible-path/seqan-needle-1.0.2+ds/test/api /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/api /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/api/CMakeFiles/count_test.dir/DependInfo.cmake "--color=" gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' /usr/bin/gmake -f test/api/CMakeFiles/count_test.dir/build.make test/api/CMakeFiles/count_test.dir/build gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' [ 40%] Building CXX object test/api/CMakeFiles/count_test.dir/count_test.cpp.o cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/api && /usr/bin/c++ -DBINDIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/bin/\" -DDATADIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/data/\" -DDATA_INPUT_DIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/test/data/\" -DOUTPUTDIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/output/\" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/build/reproducible-path/seqan-needle-1.0.2+ds/test/api/SEQAN3_CLONE_DIR-NOTFOUND/test/include -I/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/vendor/googletest/googletest/include -I/build/reproducible-path/seqan-needle-1.0.2+ds/src/../include -I/build/reproducible-path/seqan-needle-1.0.2+ds/lib/robin-hood-hashing/src/include -isystem /usr/include/seqan3/submodules/sdsl-lite/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.2+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++20 -fopenmp -MD -MT test/api/CMakeFiles/count_test.dir/count_test.cpp.o -MF CMakeFiles/count_test.dir/count_test.cpp.o.d -o CMakeFiles/count_test.dir/count_test.cpp.o -c /build/reproducible-path/seqan-needle-1.0.2+ds/test/api/count_test.cpp [ 46%] Linking CXX executable count_test cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/api && /usr/bin/cmake -E cmake_link_script CMakeFiles/count_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.2+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now CMakeFiles/count_test.dir/count_test.cpp.o -o count_test ../../lib/libneedle_lib.a -lgtest -lgtest_main /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so -lrt /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' [ 46%] Built target count_test /usr/bin/gmake -f test/api/CMakeFiles/insert_delete_test.dir/build.make test/api/CMakeFiles/insert_delete_test.dir/depend gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-needle-1.0.2+ds /build/reproducible-path/seqan-needle-1.0.2+ds/test/api /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/api /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/api/CMakeFiles/insert_delete_test.dir/DependInfo.cmake "--color=" gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' /usr/bin/gmake -f test/api/CMakeFiles/insert_delete_test.dir/build.make test/api/CMakeFiles/insert_delete_test.dir/build gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' [ 53%] Building CXX object test/api/CMakeFiles/insert_delete_test.dir/insert_delete_test.cpp.o cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/api && /usr/bin/c++ -DBINDIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/bin/\" -DDATADIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/data/\" -DDATA_INPUT_DIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/test/data/\" -DOUTPUTDIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/output/\" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/build/reproducible-path/seqan-needle-1.0.2+ds/test/api/SEQAN3_CLONE_DIR-NOTFOUND/test/include -I/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/vendor/googletest/googletest/include -I/build/reproducible-path/seqan-needle-1.0.2+ds/src/../include -I/build/reproducible-path/seqan-needle-1.0.2+ds/lib/robin-hood-hashing/src/include -isystem /usr/include/seqan3/submodules/sdsl-lite/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.2+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++20 -fopenmp -MD -MT test/api/CMakeFiles/insert_delete_test.dir/insert_delete_test.cpp.o -MF CMakeFiles/insert_delete_test.dir/insert_delete_test.cpp.o.d -o CMakeFiles/insert_delete_test.dir/insert_delete_test.cpp.o -c /build/reproducible-path/seqan-needle-1.0.2+ds/test/api/insert_delete_test.cpp [ 60%] Linking CXX executable insert_delete_test cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/api && /usr/bin/cmake -E cmake_link_script CMakeFiles/insert_delete_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.2+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now CMakeFiles/insert_delete_test.dir/insert_delete_test.cpp.o -o insert_delete_test ../../lib/libneedle_lib.a -lgtest -lgtest_main /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so -lrt /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' [ 60%] Built target insert_delete_test /usr/bin/gmake -f test/api/CMakeFiles/estimate_test.dir/build.make test/api/CMakeFiles/estimate_test.dir/depend gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-needle-1.0.2+ds /build/reproducible-path/seqan-needle-1.0.2+ds/test/api /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/api /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/api/CMakeFiles/estimate_test.dir/DependInfo.cmake "--color=" gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' /usr/bin/gmake -f test/api/CMakeFiles/estimate_test.dir/build.make test/api/CMakeFiles/estimate_test.dir/build gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' [ 66%] Building CXX object test/api/CMakeFiles/estimate_test.dir/estimate_test.cpp.o cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/api && /usr/bin/c++ -DBINDIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/bin/\" -DDATADIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/data/\" -DDATA_INPUT_DIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/test/data/\" -DOUTPUTDIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/output/\" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/build/reproducible-path/seqan-needle-1.0.2+ds/test/api/SEQAN3_CLONE_DIR-NOTFOUND/test/include -I/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/vendor/googletest/googletest/include -I/build/reproducible-path/seqan-needle-1.0.2+ds/src/../include -I/build/reproducible-path/seqan-needle-1.0.2+ds/lib/robin-hood-hashing/src/include -isystem /usr/include/seqan3/submodules/sdsl-lite/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.2+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++20 -fopenmp -MD -MT test/api/CMakeFiles/estimate_test.dir/estimate_test.cpp.o -MF CMakeFiles/estimate_test.dir/estimate_test.cpp.o.d -o CMakeFiles/estimate_test.dir/estimate_test.cpp.o -c /build/reproducible-path/seqan-needle-1.0.2+ds/test/api/estimate_test.cpp [ 73%] Linking CXX executable estimate_test cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/api && /usr/bin/cmake -E cmake_link_script CMakeFiles/estimate_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.2+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now CMakeFiles/estimate_test.dir/estimate_test.cpp.o -o estimate_test ../../lib/libneedle_lib.a -lgtest -lgtest_main /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so -lrt /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' [ 73%] Built target estimate_test /usr/bin/gmake -f test/api/CMakeFiles/ibf_test.dir/build.make test/api/CMakeFiles/ibf_test.dir/depend gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-needle-1.0.2+ds /build/reproducible-path/seqan-needle-1.0.2+ds/test/api /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/api /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/api/CMakeFiles/ibf_test.dir/DependInfo.cmake "--color=" gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' /usr/bin/gmake -f test/api/CMakeFiles/ibf_test.dir/build.make test/api/CMakeFiles/ibf_test.dir/build gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' [ 80%] Building CXX object test/api/CMakeFiles/ibf_test.dir/ibf_test.cpp.o cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/api && /usr/bin/c++ -DBINDIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/bin/\" -DDATADIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/data/\" -DDATA_INPUT_DIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/test/data/\" -DOUTPUTDIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/output/\" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/build/reproducible-path/seqan-needle-1.0.2+ds/test/api/SEQAN3_CLONE_DIR-NOTFOUND/test/include -I/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/vendor/googletest/googletest/include -I/build/reproducible-path/seqan-needle-1.0.2+ds/src/../include -I/build/reproducible-path/seqan-needle-1.0.2+ds/lib/robin-hood-hashing/src/include -isystem /usr/include/seqan3/submodules/sdsl-lite/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.2+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++20 -fopenmp -MD -MT test/api/CMakeFiles/ibf_test.dir/ibf_test.cpp.o -MF CMakeFiles/ibf_test.dir/ibf_test.cpp.o.d -o CMakeFiles/ibf_test.dir/ibf_test.cpp.o -c /build/reproducible-path/seqan-needle-1.0.2+ds/test/api/ibf_test.cpp [ 86%] Linking CXX executable ibf_test cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/api && /usr/bin/cmake -E cmake_link_script CMakeFiles/ibf_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.2+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now CMakeFiles/ibf_test.dir/ibf_test.cpp.o -o ibf_test ../../lib/libneedle_lib.a -lgtest -lgtest_main /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so -lrt /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' [ 86%] Built target ibf_test /usr/bin/gmake -f test/api/CMakeFiles/ibfmin_test.dir/build.make test/api/CMakeFiles/ibfmin_test.dir/depend gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-needle-1.0.2+ds /build/reproducible-path/seqan-needle-1.0.2+ds/test/api /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/api /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/api/CMakeFiles/ibfmin_test.dir/DependInfo.cmake "--color=" gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' /usr/bin/gmake -f test/api/CMakeFiles/ibfmin_test.dir/build.make test/api/CMakeFiles/ibfmin_test.dir/build gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' [ 93%] Building CXX object test/api/CMakeFiles/ibfmin_test.dir/ibfmin_test.cpp.o cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/api && /usr/bin/c++ -DBINDIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/bin/\" -DDATADIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/data/\" -DDATA_INPUT_DIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/test/data/\" -DOUTPUTDIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/output/\" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/build/reproducible-path/seqan-needle-1.0.2+ds/test/api/SEQAN3_CLONE_DIR-NOTFOUND/test/include -I/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/vendor/googletest/googletest/include -I/build/reproducible-path/seqan-needle-1.0.2+ds/src/../include -I/build/reproducible-path/seqan-needle-1.0.2+ds/lib/robin-hood-hashing/src/include -isystem /usr/include/seqan3/submodules/sdsl-lite/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.2+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++20 -fopenmp -MD -MT test/api/CMakeFiles/ibfmin_test.dir/ibfmin_test.cpp.o -MF CMakeFiles/ibfmin_test.dir/ibfmin_test.cpp.o.d -o CMakeFiles/ibfmin_test.dir/ibfmin_test.cpp.o -c /build/reproducible-path/seqan-needle-1.0.2+ds/test/api/ibfmin_test.cpp [100%] Linking CXX executable ibfmin_test cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/api && /usr/bin/cmake -E cmake_link_script CMakeFiles/ibfmin_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.2+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now CMakeFiles/ibfmin_test.dir/ibfmin_test.cpp.o -o ibfmin_test ../../lib/libneedle_lib.a -lgtest -lgtest_main /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so -lrt /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' [100%] Built target ibfmin_test /usr/bin/gmake -f test/CMakeFiles/api_test.dir/build.make test/CMakeFiles/api_test.dir/depend gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-needle-1.0.2+ds /build/reproducible-path/seqan-needle-1.0.2+ds/test /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/CMakeFiles/api_test.dir/DependInfo.cmake "--color=" gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' /usr/bin/gmake -f test/CMakeFiles/api_test.dir/build.make test/CMakeFiles/api_test.dir/build gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' gmake[5]: Nothing to be done for 'test/CMakeFiles/api_test.dir/build'. gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' [100%] Built target api_test gmake[4]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/CMakeFiles 0 gmake[3]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' gmake[2]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test' Change Dir: '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test' Run Build Command(s): /usr/bin/cmake -E env VERBOSE=1 /usr/bin/gmake -f Makefile cli_test gmake[2]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test' gmake[2]: warning: jobserver unavailable: using -j1. Add '+' to parent make rule. cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu && /usr/bin/gmake -f CMakeFiles/Makefile2 test/CMakeFiles/cli_test.dir/rule gmake[3]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/seqan-needle-1.0.2+ds -B/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/CMakeFiles 70 /usr/bin/gmake -f CMakeFiles/Makefile2 test/CMakeFiles/cli_test.dir/all gmake[4]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' /usr/bin/gmake -f test/CMakeFiles/datasource--exp_01.fasta.dir/build.make test/CMakeFiles/datasource--exp_01.fasta.dir/depend gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-needle-1.0.2+ds /build/reproducible-path/seqan-needle-1.0.2+ds/test /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/CMakeFiles/datasource--exp_01.fasta.dir/DependInfo.cmake "--color=" gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' /usr/bin/gmake -f test/CMakeFiles/datasource--exp_01.fasta.dir/build.make test/CMakeFiles/datasource--exp_01.fasta.dir/build gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' [ 1%] Creating directories for 'datasource--exp_01.fasta' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test && /usr/bin/cmake -Dcfgdir= -P /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/tmp/datasource--exp_01.fasta-mkdirs.cmake cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--exp_01.fasta-stamp/datasource--exp_01.fasta-mkdir [ 2%] Performing download step (verify) for 'datasource--exp_01.fasta' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src && /usr/bin/cmake -P /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--exp_01.fasta-stamp/verify-datasource--exp_01.fasta.cmake -- verifying file... file='/build/reproducible-path/seqan-needle-1.0.2+ds/test/data/exp_01.fasta' -- verifying file... done cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--exp_01.fasta-stamp/datasource--exp_01.fasta-download [ 4%] No update step for 'datasource--exp_01.fasta' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test && /usr/bin/cmake -E echo_append cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--exp_01.fasta-stamp/datasource--exp_01.fasta-update [ 5%] No patch step for 'datasource--exp_01.fasta' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test && /usr/bin/cmake -E echo_append cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--exp_01.fasta-stamp/datasource--exp_01.fasta-patch [ 7%] No configure step for 'datasource--exp_01.fasta' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--exp_01.fasta-build && /usr/bin/cmake -E echo_append cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--exp_01.fasta-build && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--exp_01.fasta-stamp/datasource--exp_01.fasta-configure [ 8%] No build step for 'datasource--exp_01.fasta' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--exp_01.fasta-build && /usr/bin/cmake -E echo_append cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--exp_01.fasta-build && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--exp_01.fasta-stamp/datasource--exp_01.fasta-build [ 10%] Performing install step for 'datasource--exp_01.fasta' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--exp_01.fasta-build && /usr/bin/cmake -E create_symlink /build/reproducible-path/seqan-needle-1.0.2+ds/test/data/exp_01.fasta /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/data/exp_01.fasta cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--exp_01.fasta-build && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--exp_01.fasta-stamp/datasource--exp_01.fasta-install [ 11%] No test step for 'datasource--exp_01.fasta' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--exp_01.fasta-build && /usr/bin/cmake -E echo_append cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--exp_01.fasta-build && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--exp_01.fasta-stamp/datasource--exp_01.fasta-test [ 12%] Completed 'datasource--exp_01.fasta' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test && /usr/bin/cmake -E make_directory /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/CMakeFiles cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/CMakeFiles/datasource--exp_01.fasta-complete cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--exp_01.fasta-stamp/datasource--exp_01.fasta-done gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' [ 12%] Built target datasource--exp_01.fasta /usr/bin/gmake -f src/CMakeFiles/needle_lib.dir/build.make src/CMakeFiles/needle_lib.dir/depend gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-needle-1.0.2+ds /build/reproducible-path/seqan-needle-1.0.2+ds/src /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/src /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/src/CMakeFiles/needle_lib.dir/DependInfo.cmake "--color=" gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' /usr/bin/gmake -f src/CMakeFiles/needle_lib.dir/build.make src/CMakeFiles/needle_lib.dir/build gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' gmake[5]: Nothing to be done for 'src/CMakeFiles/needle_lib.dir/build'. gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' [ 17%] Built target needle_lib /usr/bin/gmake -f src/CMakeFiles/needle.dir/build.make src/CMakeFiles/needle.dir/depend gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-needle-1.0.2+ds /build/reproducible-path/seqan-needle-1.0.2+ds/src /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/src /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/src/CMakeFiles/needle.dir/DependInfo.cmake "--color=" Dependencies file "src/CMakeFiles/needle.dir/main.cpp.o.d" is newer than depends file "/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/src/CMakeFiles/needle.dir/compiler_depend.internal". Consolidate compiler generated dependencies of target needle gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' /usr/bin/gmake -f src/CMakeFiles/needle.dir/build.make src/CMakeFiles/needle.dir/build gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' gmake[5]: Nothing to be done for 'src/CMakeFiles/needle.dir/build'. gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' [ 20%] Built target needle /usr/bin/gmake -f test/cli/CMakeFiles/delete_options_test.dir/build.make test/cli/CMakeFiles/delete_options_test.dir/depend gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-needle-1.0.2+ds /build/reproducible-path/seqan-needle-1.0.2+ds/test/cli /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/cli /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/cli/CMakeFiles/delete_options_test.dir/DependInfo.cmake "--color=" gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' /usr/bin/gmake -f test/cli/CMakeFiles/delete_options_test.dir/build.make test/cli/CMakeFiles/delete_options_test.dir/build gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' [ 21%] Building CXX object test/cli/CMakeFiles/delete_options_test.dir/delete_options_test.cpp.o cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/cli && /usr/bin/c++ -DBINDIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/bin/\" -DDATADIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/data/\" -DDATA_INPUT_DIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/test/data/\" -DOUTPUTDIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/output/\" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/build/reproducible-path/seqan-needle-1.0.2+ds/test/cli/SEQAN3_CLONE_DIR-NOTFOUND/test/include -I/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/vendor/googletest/googletest/include -I/build/reproducible-path/seqan-needle-1.0.2+ds/src/../include -I/build/reproducible-path/seqan-needle-1.0.2+ds/lib/robin-hood-hashing/src/include -isystem /usr/include/seqan3/submodules/sdsl-lite/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.2+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++20 -fopenmp -MD -MT test/cli/CMakeFiles/delete_options_test.dir/delete_options_test.cpp.o -MF CMakeFiles/delete_options_test.dir/delete_options_test.cpp.o.d -o CMakeFiles/delete_options_test.dir/delete_options_test.cpp.o -c /build/reproducible-path/seqan-needle-1.0.2+ds/test/cli/delete_options_test.cpp [ 22%] Linking CXX executable delete_options_test cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/cli && /usr/bin/cmake -E cmake_link_script CMakeFiles/delete_options_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.2+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now CMakeFiles/delete_options_test.dir/delete_options_test.cpp.o -o delete_options_test ../../lib/libneedle_lib.a -lgtest -lgtest_main /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so -lrt /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' [ 22%] Built target delete_options_test /usr/bin/gmake -f test/cli/CMakeFiles/needle_options_test.dir/build.make test/cli/CMakeFiles/needle_options_test.dir/depend gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-needle-1.0.2+ds /build/reproducible-path/seqan-needle-1.0.2+ds/test/cli /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/cli /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/cli/CMakeFiles/needle_options_test.dir/DependInfo.cmake "--color=" gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' /usr/bin/gmake -f test/cli/CMakeFiles/needle_options_test.dir/build.make test/cli/CMakeFiles/needle_options_test.dir/build gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' [ 24%] Building CXX object test/cli/CMakeFiles/needle_options_test.dir/needle_options_test.cpp.o cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/cli && /usr/bin/c++ -DBINDIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/bin/\" -DDATADIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/data/\" -DDATA_INPUT_DIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/test/data/\" -DOUTPUTDIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/output/\" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/build/reproducible-path/seqan-needle-1.0.2+ds/test/cli/SEQAN3_CLONE_DIR-NOTFOUND/test/include -I/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/vendor/googletest/googletest/include -I/build/reproducible-path/seqan-needle-1.0.2+ds/src/../include -I/build/reproducible-path/seqan-needle-1.0.2+ds/lib/robin-hood-hashing/src/include -isystem /usr/include/seqan3/submodules/sdsl-lite/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.2+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++20 -fopenmp -MD -MT test/cli/CMakeFiles/needle_options_test.dir/needle_options_test.cpp.o -MF CMakeFiles/needle_options_test.dir/needle_options_test.cpp.o.d -o CMakeFiles/needle_options_test.dir/needle_options_test.cpp.o -c /build/reproducible-path/seqan-needle-1.0.2+ds/test/cli/needle_options_test.cpp [ 25%] Linking CXX executable needle_options_test cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/cli && /usr/bin/cmake -E cmake_link_script CMakeFiles/needle_options_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.2+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now CMakeFiles/needle_options_test.dir/needle_options_test.cpp.o -o needle_options_test ../../lib/libneedle_lib.a -lgtest -lgtest_main /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so -lrt /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' [ 25%] Built target needle_options_test /usr/bin/gmake -f test/CMakeFiles/datasource--mini_example.minimiser.dir/build.make test/CMakeFiles/datasource--mini_example.minimiser.dir/depend gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-needle-1.0.2+ds /build/reproducible-path/seqan-needle-1.0.2+ds/test /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/CMakeFiles/datasource--mini_example.minimiser.dir/DependInfo.cmake "--color=" gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' /usr/bin/gmake -f test/CMakeFiles/datasource--mini_example.minimiser.dir/build.make test/CMakeFiles/datasource--mini_example.minimiser.dir/build gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' [ 27%] Creating directories for 'datasource--mini_example.minimiser' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test && /usr/bin/cmake -Dcfgdir= -P /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/tmp/datasource--mini_example.minimiser-mkdirs.cmake cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--mini_example.minimiser-stamp/datasource--mini_example.minimiser-mkdir [ 28%] Performing download step (verify) for 'datasource--mini_example.minimiser' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src && /usr/bin/cmake -P /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--mini_example.minimiser-stamp/verify-datasource--mini_example.minimiser.cmake -- verifying file... file='/build/reproducible-path/seqan-needle-1.0.2+ds/test/data/mini_example.minimiser' -- verifying file... done cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--mini_example.minimiser-stamp/datasource--mini_example.minimiser-download [ 30%] No update step for 'datasource--mini_example.minimiser' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test && /usr/bin/cmake -E echo_append cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--mini_example.minimiser-stamp/datasource--mini_example.minimiser-update [ 31%] No patch step for 'datasource--mini_example.minimiser' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test && /usr/bin/cmake -E echo_append cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--mini_example.minimiser-stamp/datasource--mini_example.minimiser-patch [ 32%] No configure step for 'datasource--mini_example.minimiser' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--mini_example.minimiser-build && /usr/bin/cmake -E echo_append cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--mini_example.minimiser-build && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--mini_example.minimiser-stamp/datasource--mini_example.minimiser-configure [ 34%] No build step for 'datasource--mini_example.minimiser' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--mini_example.minimiser-build && /usr/bin/cmake -E echo_append cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--mini_example.minimiser-build && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--mini_example.minimiser-stamp/datasource--mini_example.minimiser-build [ 35%] Performing install step for 'datasource--mini_example.minimiser' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--mini_example.minimiser-build && /usr/bin/cmake -E create_symlink /build/reproducible-path/seqan-needle-1.0.2+ds/test/data/mini_example.minimiser /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/data/mini_example.minimiser cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--mini_example.minimiser-build && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--mini_example.minimiser-stamp/datasource--mini_example.minimiser-install [ 37%] No test step for 'datasource--mini_example.minimiser' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--mini_example.minimiser-build && /usr/bin/cmake -E echo_append cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--mini_example.minimiser-build && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--mini_example.minimiser-stamp/datasource--mini_example.minimiser-test [ 38%] Completed 'datasource--mini_example.minimiser' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test && /usr/bin/cmake -E make_directory /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/CMakeFiles cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/CMakeFiles/datasource--mini_example.minimiser-complete cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--mini_example.minimiser-stamp/datasource--mini_example.minimiser-done gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' [ 38%] Built target datasource--mini_example.minimiser /usr/bin/gmake -f test/CMakeFiles/datasource--mini_example.fasta.dir/build.make test/CMakeFiles/datasource--mini_example.fasta.dir/depend gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-needle-1.0.2+ds /build/reproducible-path/seqan-needle-1.0.2+ds/test /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/CMakeFiles/datasource--mini_example.fasta.dir/DependInfo.cmake "--color=" gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' /usr/bin/gmake -f test/CMakeFiles/datasource--mini_example.fasta.dir/build.make test/CMakeFiles/datasource--mini_example.fasta.dir/build gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' [ 40%] Creating directories for 'datasource--mini_example.fasta' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test && /usr/bin/cmake -Dcfgdir= -P /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/tmp/datasource--mini_example.fasta-mkdirs.cmake cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--mini_example.fasta-stamp/datasource--mini_example.fasta-mkdir [ 41%] Performing download step (verify) for 'datasource--mini_example.fasta' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src && /usr/bin/cmake -P /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--mini_example.fasta-stamp/verify-datasource--mini_example.fasta.cmake -- verifying file... file='/build/reproducible-path/seqan-needle-1.0.2+ds/test/data/mini_example.fasta' -- verifying file... done cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--mini_example.fasta-stamp/datasource--mini_example.fasta-download [ 42%] No update step for 'datasource--mini_example.fasta' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test && /usr/bin/cmake -E echo_append cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--mini_example.fasta-stamp/datasource--mini_example.fasta-update [ 44%] No patch step for 'datasource--mini_example.fasta' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test && /usr/bin/cmake -E echo_append cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--mini_example.fasta-stamp/datasource--mini_example.fasta-patch [ 45%] No configure step for 'datasource--mini_example.fasta' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--mini_example.fasta-build && /usr/bin/cmake -E echo_append cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--mini_example.fasta-build && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--mini_example.fasta-stamp/datasource--mini_example.fasta-configure [ 47%] No build step for 'datasource--mini_example.fasta' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--mini_example.fasta-build && /usr/bin/cmake -E echo_append cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--mini_example.fasta-build && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--mini_example.fasta-stamp/datasource--mini_example.fasta-build [ 47%] Performing install step for 'datasource--mini_example.fasta' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--mini_example.fasta-build && /usr/bin/cmake -E create_symlink /build/reproducible-path/seqan-needle-1.0.2+ds/test/data/mini_example.fasta /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/data/mini_example.fasta cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--mini_example.fasta-build && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--mini_example.fasta-stamp/datasource--mini_example.fasta-install [ 48%] No test step for 'datasource--mini_example.fasta' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--mini_example.fasta-build && /usr/bin/cmake -E echo_append cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--mini_example.fasta-build && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--mini_example.fasta-stamp/datasource--mini_example.fasta-test [ 50%] Completed 'datasource--mini_example.fasta' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test && /usr/bin/cmake -E make_directory /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/CMakeFiles cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/CMakeFiles/datasource--mini_example.fasta-complete cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--mini_example.fasta-stamp/datasource--mini_example.fasta-done gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' [ 50%] Built target datasource--mini_example.fasta /usr/bin/gmake -f test/cli/CMakeFiles/ibf_options_test.dir/build.make test/cli/CMakeFiles/ibf_options_test.dir/depend gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-needle-1.0.2+ds /build/reproducible-path/seqan-needle-1.0.2+ds/test/cli /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/cli /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/cli/CMakeFiles/ibf_options_test.dir/DependInfo.cmake "--color=" gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' /usr/bin/gmake -f test/cli/CMakeFiles/ibf_options_test.dir/build.make test/cli/CMakeFiles/ibf_options_test.dir/build gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' [ 51%] Building CXX object test/cli/CMakeFiles/ibf_options_test.dir/ibf_options_test.cpp.o cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/cli && /usr/bin/c++ -DBINDIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/bin/\" -DDATADIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/data/\" -DDATA_INPUT_DIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/test/data/\" -DOUTPUTDIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/output/\" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/build/reproducible-path/seqan-needle-1.0.2+ds/test/cli/SEQAN3_CLONE_DIR-NOTFOUND/test/include -I/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/vendor/googletest/googletest/include -I/build/reproducible-path/seqan-needle-1.0.2+ds/src/../include -I/build/reproducible-path/seqan-needle-1.0.2+ds/lib/robin-hood-hashing/src/include -isystem /usr/include/seqan3/submodules/sdsl-lite/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.2+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++20 -fopenmp -MD -MT test/cli/CMakeFiles/ibf_options_test.dir/ibf_options_test.cpp.o -MF CMakeFiles/ibf_options_test.dir/ibf_options_test.cpp.o.d -o CMakeFiles/ibf_options_test.dir/ibf_options_test.cpp.o -c /build/reproducible-path/seqan-needle-1.0.2+ds/test/cli/ibf_options_test.cpp [ 52%] Linking CXX executable ibf_options_test cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/cli && /usr/bin/cmake -E cmake_link_script CMakeFiles/ibf_options_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.2+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now CMakeFiles/ibf_options_test.dir/ibf_options_test.cpp.o -o ibf_options_test ../../lib/libneedle_lib.a -lgtest -lgtest_main /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so -lrt /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' [ 52%] Built target ibf_options_test /usr/bin/gmake -f test/cli/CMakeFiles/insert_options_test.dir/build.make test/cli/CMakeFiles/insert_options_test.dir/depend gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-needle-1.0.2+ds /build/reproducible-path/seqan-needle-1.0.2+ds/test/cli /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/cli /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/cli/CMakeFiles/insert_options_test.dir/DependInfo.cmake "--color=" gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' /usr/bin/gmake -f test/cli/CMakeFiles/insert_options_test.dir/build.make test/cli/CMakeFiles/insert_options_test.dir/build gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' [ 54%] Building CXX object test/cli/CMakeFiles/insert_options_test.dir/insert_options_test.cpp.o cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/cli && /usr/bin/c++ -DBINDIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/bin/\" -DDATADIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/data/\" -DDATA_INPUT_DIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/test/data/\" -DOUTPUTDIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/output/\" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/build/reproducible-path/seqan-needle-1.0.2+ds/test/cli/SEQAN3_CLONE_DIR-NOTFOUND/test/include -I/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/vendor/googletest/googletest/include -I/build/reproducible-path/seqan-needle-1.0.2+ds/src/../include -I/build/reproducible-path/seqan-needle-1.0.2+ds/lib/robin-hood-hashing/src/include -isystem /usr/include/seqan3/submodules/sdsl-lite/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.2+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++20 -fopenmp -MD -MT test/cli/CMakeFiles/insert_options_test.dir/insert_options_test.cpp.o -MF CMakeFiles/insert_options_test.dir/insert_options_test.cpp.o.d -o CMakeFiles/insert_options_test.dir/insert_options_test.cpp.o -c /build/reproducible-path/seqan-needle-1.0.2+ds/test/cli/insert_options_test.cpp [ 55%] Linking CXX executable insert_options_test cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/cli && /usr/bin/cmake -E cmake_link_script CMakeFiles/insert_options_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.2+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now CMakeFiles/insert_options_test.dir/insert_options_test.cpp.o -o insert_options_test ../../lib/libneedle_lib.a -lgtest -lgtest_main /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so -lrt /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' [ 55%] Built target insert_options_test /usr/bin/gmake -f test/cli/CMakeFiles/minimiser_options_test.dir/build.make test/cli/CMakeFiles/minimiser_options_test.dir/depend gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-needle-1.0.2+ds /build/reproducible-path/seqan-needle-1.0.2+ds/test/cli /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/cli /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/cli/CMakeFiles/minimiser_options_test.dir/DependInfo.cmake "--color=" gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' /usr/bin/gmake -f test/cli/CMakeFiles/minimiser_options_test.dir/build.make test/cli/CMakeFiles/minimiser_options_test.dir/build gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' [ 57%] Building CXX object test/cli/CMakeFiles/minimiser_options_test.dir/minimiser_options_test.cpp.o cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/cli && /usr/bin/c++ -DBINDIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/bin/\" -DDATADIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/data/\" -DDATA_INPUT_DIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/test/data/\" -DOUTPUTDIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/output/\" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/build/reproducible-path/seqan-needle-1.0.2+ds/test/cli/SEQAN3_CLONE_DIR-NOTFOUND/test/include -I/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/vendor/googletest/googletest/include -I/build/reproducible-path/seqan-needle-1.0.2+ds/src/../include -I/build/reproducible-path/seqan-needle-1.0.2+ds/lib/robin-hood-hashing/src/include -isystem /usr/include/seqan3/submodules/sdsl-lite/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.2+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++20 -fopenmp -MD -MT test/cli/CMakeFiles/minimiser_options_test.dir/minimiser_options_test.cpp.o -MF CMakeFiles/minimiser_options_test.dir/minimiser_options_test.cpp.o.d -o CMakeFiles/minimiser_options_test.dir/minimiser_options_test.cpp.o -c /build/reproducible-path/seqan-needle-1.0.2+ds/test/cli/minimiser_options_test.cpp [ 58%] Linking CXX executable minimiser_options_test cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/cli && /usr/bin/cmake -E cmake_link_script CMakeFiles/minimiser_options_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.2+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now CMakeFiles/minimiser_options_test.dir/minimiser_options_test.cpp.o -o minimiser_options_test ../../lib/libneedle_lib.a -lgtest -lgtest_main /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so -lrt /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' [ 58%] Built target minimiser_options_test /usr/bin/gmake -f test/CMakeFiles/datasource--mini_gen.fasta.dir/build.make test/CMakeFiles/datasource--mini_gen.fasta.dir/depend gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-needle-1.0.2+ds /build/reproducible-path/seqan-needle-1.0.2+ds/test /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/CMakeFiles/datasource--mini_gen.fasta.dir/DependInfo.cmake "--color=" gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' /usr/bin/gmake -f test/CMakeFiles/datasource--mini_gen.fasta.dir/build.make test/CMakeFiles/datasource--mini_gen.fasta.dir/build gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' [ 60%] Creating directories for 'datasource--mini_gen.fasta' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test && /usr/bin/cmake -Dcfgdir= -P /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/tmp/datasource--mini_gen.fasta-mkdirs.cmake cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--mini_gen.fasta-stamp/datasource--mini_gen.fasta-mkdir [ 61%] Performing download step (verify) for 'datasource--mini_gen.fasta' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src && /usr/bin/cmake -P /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--mini_gen.fasta-stamp/verify-datasource--mini_gen.fasta.cmake -- verifying file... file='/build/reproducible-path/seqan-needle-1.0.2+ds/test/data/mini_gen.fasta' -- verifying file... done cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--mini_gen.fasta-stamp/datasource--mini_gen.fasta-download [ 62%] No update step for 'datasource--mini_gen.fasta' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test && /usr/bin/cmake -E echo_append cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--mini_gen.fasta-stamp/datasource--mini_gen.fasta-update [ 64%] No patch step for 'datasource--mini_gen.fasta' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test && /usr/bin/cmake -E echo_append cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--mini_gen.fasta-stamp/datasource--mini_gen.fasta-patch [ 65%] No configure step for 'datasource--mini_gen.fasta' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--mini_gen.fasta-build && /usr/bin/cmake -E echo_append cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--mini_gen.fasta-build && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--mini_gen.fasta-stamp/datasource--mini_gen.fasta-configure [ 67%] No build step for 'datasource--mini_gen.fasta' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--mini_gen.fasta-build && /usr/bin/cmake -E echo_append cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--mini_gen.fasta-build && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--mini_gen.fasta-stamp/datasource--mini_gen.fasta-build [ 68%] Performing install step for 'datasource--mini_gen.fasta' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--mini_gen.fasta-build && /usr/bin/cmake -E create_symlink /build/reproducible-path/seqan-needle-1.0.2+ds/test/data/mini_gen.fasta /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/data/mini_gen.fasta cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--mini_gen.fasta-build && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--mini_gen.fasta-stamp/datasource--mini_gen.fasta-install [ 70%] No test step for 'datasource--mini_gen.fasta' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--mini_gen.fasta-build && /usr/bin/cmake -E echo_append cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--mini_gen.fasta-build && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--mini_gen.fasta-stamp/datasource--mini_gen.fasta-test [ 71%] Completed 'datasource--mini_gen.fasta' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test && /usr/bin/cmake -E make_directory /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/CMakeFiles cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/CMakeFiles/datasource--mini_gen.fasta-complete cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--mini_gen.fasta-stamp/datasource--mini_gen.fasta-done gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' [ 71%] Built target datasource--mini_gen.fasta /usr/bin/gmake -f test/CMakeFiles/datasource--ibf_1.dir/build.make test/CMakeFiles/datasource--ibf_1.dir/depend gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-needle-1.0.2+ds /build/reproducible-path/seqan-needle-1.0.2+ds/test /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/CMakeFiles/datasource--ibf_1.dir/DependInfo.cmake "--color=" gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' /usr/bin/gmake -f test/CMakeFiles/datasource--ibf_1.dir/build.make test/CMakeFiles/datasource--ibf_1.dir/build gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' [ 72%] Creating directories for 'datasource--ibf_1' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test && /usr/bin/cmake -Dcfgdir= -P /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/tmp/datasource--ibf_1-mkdirs.cmake cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--ibf_1-stamp/datasource--ibf_1-mkdir [ 74%] Performing download step (verify) for 'datasource--ibf_1' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src && /usr/bin/cmake -P /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--ibf_1-stamp/verify-datasource--ibf_1.cmake -- verifying file... file='/build/reproducible-path/seqan-needle-1.0.2+ds/test/data/IBF_1' -- verifying file... done cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--ibf_1-stamp/datasource--ibf_1-download [ 75%] No update step for 'datasource--ibf_1' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test && /usr/bin/cmake -E echo_append cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--ibf_1-stamp/datasource--ibf_1-update [ 77%] No patch step for 'datasource--ibf_1' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test && /usr/bin/cmake -E echo_append cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--ibf_1-stamp/datasource--ibf_1-patch [ 78%] No configure step for 'datasource--ibf_1' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--ibf_1-build && /usr/bin/cmake -E echo_append cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--ibf_1-build && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--ibf_1-stamp/datasource--ibf_1-configure [ 80%] No build step for 'datasource--ibf_1' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--ibf_1-build && /usr/bin/cmake -E echo_append cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--ibf_1-build && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--ibf_1-stamp/datasource--ibf_1-build [ 81%] Performing install step for 'datasource--ibf_1' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--ibf_1-build && /usr/bin/cmake -E create_symlink /build/reproducible-path/seqan-needle-1.0.2+ds/test/data/IBF_1 /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/data/IBF_1 cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--ibf_1-build && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--ibf_1-stamp/datasource--ibf_1-install [ 82%] No test step for 'datasource--ibf_1' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--ibf_1-build && /usr/bin/cmake -E echo_append cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--ibf_1-build && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--ibf_1-stamp/datasource--ibf_1-test [ 84%] Completed 'datasource--ibf_1' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test && /usr/bin/cmake -E make_directory /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/CMakeFiles cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/CMakeFiles/datasource--ibf_1-complete cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--ibf_1-stamp/datasource--ibf_1-done gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' [ 84%] Built target datasource--ibf_1 /usr/bin/gmake -f test/cli/CMakeFiles/estimate_options_test.dir/build.make test/cli/CMakeFiles/estimate_options_test.dir/depend gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-needle-1.0.2+ds /build/reproducible-path/seqan-needle-1.0.2+ds/test/cli /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/cli /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/cli/CMakeFiles/estimate_options_test.dir/DependInfo.cmake "--color=" gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' /usr/bin/gmake -f test/cli/CMakeFiles/estimate_options_test.dir/build.make test/cli/CMakeFiles/estimate_options_test.dir/build gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' [ 85%] Building CXX object test/cli/CMakeFiles/estimate_options_test.dir/estimate_options_test.cpp.o cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/cli && /usr/bin/c++ -DBINDIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/bin/\" -DDATADIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/data/\" -DDATA_INPUT_DIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/test/data/\" -DOUTPUTDIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/output/\" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/build/reproducible-path/seqan-needle-1.0.2+ds/test/cli/SEQAN3_CLONE_DIR-NOTFOUND/test/include -I/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/vendor/googletest/googletest/include -I/build/reproducible-path/seqan-needle-1.0.2+ds/src/../include -I/build/reproducible-path/seqan-needle-1.0.2+ds/lib/robin-hood-hashing/src/include -isystem /usr/include/seqan3/submodules/sdsl-lite/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.2+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++20 -fopenmp -MD -MT test/cli/CMakeFiles/estimate_options_test.dir/estimate_options_test.cpp.o -MF CMakeFiles/estimate_options_test.dir/estimate_options_test.cpp.o.d -o CMakeFiles/estimate_options_test.dir/estimate_options_test.cpp.o -c /build/reproducible-path/seqan-needle-1.0.2+ds/test/cli/estimate_options_test.cpp [ 87%] Linking CXX executable estimate_options_test cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/cli && /usr/bin/cmake -E cmake_link_script CMakeFiles/estimate_options_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.2+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now CMakeFiles/estimate_options_test.dir/estimate_options_test.cpp.o -o estimate_options_test ../../lib/libneedle_lib.a -lgtest -lgtest_main /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so -lrt /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' [ 87%] Built target estimate_options_test /usr/bin/gmake -f test/CMakeFiles/datasource--mini_gen.genome.dir/build.make test/CMakeFiles/datasource--mini_gen.genome.dir/depend gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-needle-1.0.2+ds /build/reproducible-path/seqan-needle-1.0.2+ds/test /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/CMakeFiles/datasource--mini_gen.genome.dir/DependInfo.cmake "--color=" gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' /usr/bin/gmake -f test/CMakeFiles/datasource--mini_gen.genome.dir/build.make test/CMakeFiles/datasource--mini_gen.genome.dir/build gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' [ 88%] Creating directories for 'datasource--mini_gen.genome' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test && /usr/bin/cmake -Dcfgdir= -P /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/tmp/datasource--mini_gen.genome-mkdirs.cmake cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--mini_gen.genome-stamp/datasource--mini_gen.genome-mkdir [ 88%] Performing download step (verify) for 'datasource--mini_gen.genome' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src && /usr/bin/cmake -P /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--mini_gen.genome-stamp/verify-datasource--mini_gen.genome.cmake -- verifying file... file='/build/reproducible-path/seqan-needle-1.0.2+ds/test/data/mini_gen.genome' -- verifying file... done cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--mini_gen.genome-stamp/datasource--mini_gen.genome-download [ 90%] No update step for 'datasource--mini_gen.genome' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test && /usr/bin/cmake -E echo_append cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--mini_gen.genome-stamp/datasource--mini_gen.genome-update [ 91%] No patch step for 'datasource--mini_gen.genome' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test && /usr/bin/cmake -E echo_append cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--mini_gen.genome-stamp/datasource--mini_gen.genome-patch [ 92%] No configure step for 'datasource--mini_gen.genome' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--mini_gen.genome-build && /usr/bin/cmake -E echo_append cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--mini_gen.genome-build && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--mini_gen.genome-stamp/datasource--mini_gen.genome-configure [ 94%] No build step for 'datasource--mini_gen.genome' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--mini_gen.genome-build && /usr/bin/cmake -E echo_append cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--mini_gen.genome-build && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--mini_gen.genome-stamp/datasource--mini_gen.genome-build [ 95%] Performing install step for 'datasource--mini_gen.genome' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--mini_gen.genome-build && /usr/bin/cmake -E create_symlink /build/reproducible-path/seqan-needle-1.0.2+ds/test/data/mini_gen.genome /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/data/mini_gen.genome cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--mini_gen.genome-build && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--mini_gen.genome-stamp/datasource--mini_gen.genome-install [ 97%] No test step for 'datasource--mini_gen.genome' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--mini_gen.genome-build && /usr/bin/cmake -E echo_append cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--mini_gen.genome-build && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--mini_gen.genome-stamp/datasource--mini_gen.genome-test [ 98%] Completed 'datasource--mini_gen.genome' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test && /usr/bin/cmake -E make_directory /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/CMakeFiles cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/CMakeFiles/datasource--mini_gen.genome-complete cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test && /usr/bin/cmake -E touch /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/_datasources/src/datasource--mini_gen.genome-stamp/datasource--mini_gen.genome-done gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' [ 98%] Built target datasource--mini_gen.genome /usr/bin/gmake -f test/cli/CMakeFiles/count_options_test.dir/build.make test/cli/CMakeFiles/count_options_test.dir/depend gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-needle-1.0.2+ds /build/reproducible-path/seqan-needle-1.0.2+ds/test/cli /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/cli /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/cli/CMakeFiles/count_options_test.dir/DependInfo.cmake "--color=" gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' /usr/bin/gmake -f test/cli/CMakeFiles/count_options_test.dir/build.make test/cli/CMakeFiles/count_options_test.dir/build gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' [ 98%] Building CXX object test/cli/CMakeFiles/count_options_test.dir/count_options_test.cpp.o cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/cli && /usr/bin/c++ -DBINDIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/bin/\" -DDATADIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/data/\" -DDATA_INPUT_DIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/test/data/\" -DOUTPUTDIR=\"/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/output/\" -DSEQAN3_HAS_BZIP2=1 -DSEQAN3_HAS_ZLIB=1 -I/build/reproducible-path/seqan-needle-1.0.2+ds/test/cli/SEQAN3_CLONE_DIR-NOTFOUND/test/include -I/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/vendor/googletest/googletest/include -I/build/reproducible-path/seqan-needle-1.0.2+ds/src/../include -I/build/reproducible-path/seqan-needle-1.0.2+ds/lib/robin-hood-hashing/src/include -isystem /usr/include/seqan3/submodules/sdsl-lite/include -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.2+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++20 -fopenmp -MD -MT test/cli/CMakeFiles/count_options_test.dir/count_options_test.cpp.o -MF CMakeFiles/count_options_test.dir/count_options_test.cpp.o.d -o CMakeFiles/count_options_test.dir/count_options_test.cpp.o -c /build/reproducible-path/seqan-needle-1.0.2+ds/test/cli/count_options_test.cpp [100%] Linking CXX executable count_options_test cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/cli && /usr/bin/cmake -E cmake_link_script CMakeFiles/count_options_test.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/reproducible-path/seqan-needle-1.0.2+ds=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now CMakeFiles/count_options_test.dir/count_options_test.cpp.o -o count_options_test ../../lib/libneedle_lib.a -lgtest -lgtest_main /usr/lib/x86_64-linux-gnu/libz.so /usr/lib/x86_64-linux-gnu/libbz2.so -lrt /usr/lib/gcc/x86_64-linux-gnu/13/libgomp.so /usr/lib/x86_64-linux-gnu/libpthread.a gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' [100%] Built target count_options_test /usr/bin/gmake -f test/CMakeFiles/cli_test.dir/build.make test/CMakeFiles/cli_test.dir/depend gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' cd /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/seqan-needle-1.0.2+ds /build/reproducible-path/seqan-needle-1.0.2+ds/test /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/CMakeFiles/cli_test.dir/DependInfo.cmake "--color=" gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' /usr/bin/gmake -f test/CMakeFiles/cli_test.dir/build.make test/CMakeFiles/cli_test.dir/build gmake[5]: Entering directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' gmake[5]: Nothing to be done for 'test/CMakeFiles/cli_test.dir/build'. gmake[5]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' [100%] Built target cli_test gmake[4]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/CMakeFiles 0 gmake[3]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' gmake[2]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test' Done constructing a list of tests Updating test list for fixtures Added 0 tests to meet fixture requirements Checking test dependency graph... Checking test dependency graph end test 1 Start 1: test/api/count_test 1: Test command: /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/api/count_test 1: Working Directory: /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/api 1: Test timeout computed to be: 10000000 test 2 Start 2: test/api/insert_delete_test 2: Test command: /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/api/insert_delete_test 2: Working Directory: /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/api 2: Test timeout computed to be: 10000000 test 3 Start 3: test/api/estimate_test 3: Test command: /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/api/estimate_test 3: Working Directory: /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/api 3: Test timeout computed to be: 10000000 test 4 Start 4: test/api/ibf_test 4: Test command: /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/api/ibf_test 4: Working Directory: /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/api 4: Test timeout computed to be: 10000000 test 5 Start 5: test/api/ibfmin_test 5: Test command: /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/api/ibfmin_test 5: Working Directory: /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/api 5: Test timeout computed to be: 10000000 test 6 Start 6: test/api/minimiser_test 6: Test command: /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/api/minimiser_test 6: Working Directory: /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/api 6: Test timeout computed to be: 10000000 test 7 Start 7: test/cli/needle_options_test 7: Test command: /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/cli/needle_options_test 7: Working Directory: /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/cli 7: Test timeout computed to be: 10000000 test 8 Start 8: test/cli/ibf_options_test 8: Test command: /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/cli/ibf_options_test 8: Working Directory: /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/cli 8: Test timeout computed to be: 10000000 test 9 Start 9: test/cli/insert_options_test 9: Test command: /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/cli/insert_options_test 9: Working Directory: /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/cli 9: Test timeout computed to be: 10000000 test 10 Start 10: test/cli/minimiser_options_test 10: Test command: /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/cli/minimiser_options_test 10: Working Directory: /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/cli 10: Test timeout computed to be: 10000000 test 11 Start 11: test/cli/estimate_options_test 11: Test command: /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/cli/estimate_options_test 11: Working Directory: /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/cli 11: Test timeout computed to be: 10000000 test 12 Start 12: test/cli/count_options_test 12: Test command: /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/cli/count_options_test 12: Working Directory: /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/cli 12: Test timeout computed to be: 10000000 test 13 Start 13: test/cli/delete_options_test 13: Test command: /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/cli/delete_options_test 13: Working Directory: /build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu/test/cli 13: Test timeout computed to be: 10000000 1: Running main() from ./googletest/src/gtest_main.cc 1: [==========] Running 4 tests from 2 test suites. 1: [----------] Global test environment set-up. 1: [----------] 3 tests from count 1: [ RUN ] count.small_example 1: [ OK ] count.small_example (9 ms) 1: [ RUN ] count.small_example_paired 1: [ OK ] count.small_example_paired (4 ms) 1: [ RUN ] count.small_example_exclude 1: [ OK ] count.small_example_exclude (2 ms) 1: [----------] 3 tests from count (16 ms total) 1: 1: [----------] 1 test from genome 1: [ RUN ] genome.small_example 1: [ OK ] genome.small_example (2 ms) 1: [----------] 1 test from genome (2 ms total) 1: 1: [----------] Global test environment tear-down 1: [==========] 4 tests from 2 test suites ran. (18 ms total) 1: [ PASSED ] 4 tests. 2: Running main() from ./googletest/src/gtest_main.cc 2: [==========] Running 9 tests from 2 test suites. 2: [----------] Global test environment set-up. 2: [----------] 1 test from delete 2: [ RUN ] delete.no_given_thresholds 3: Running main() from ./googletest/src/gtest_main.cc 3: [==========] Running 10 tests from 1 test suite. 3: [----------] Global test environment set-up. 3: [----------] 10 tests from estimate 3: [ RUN ] estimate.small_example 3: [ OK ] estimate.small_example (7 ms) 3: [ RUN ] estimate.small_example_uncompressed 4: Running main() from ./googletest/src/gtest_main.cc 4: [==========] Running 8 tests from 1 test suite. 4: [----------] Global test environment set-up. 4: [----------] 8 tests from ibf 4: [ RUN ] ibf.given_expression_thresholds 4: [ OK ] ibf.given_expression_thresholds (7 ms) 4: [ RUN ] ibf.given_expression_thresholds_include_file 4: [ OK ] ibf.given_expression_thresholds_include_file (1 ms) 4: [ RUN ] ibf.given_expression_thresholds_exclude_file 4: [ OK ] ibf.given_expression_thresholds_exclude_file (0 ms) 4: [ RUN ] ibf.no_given_expression_thresholds 4: [ OK ] ibf.no_given_expression_thresholds (0 ms) 4: [ RUN ] ibf.expression_thresholds_by_genome 4: [ OK ] ibf.expression_thresholds_by_genome (0 ms) 4: [ RUN ] ibf.throws 4: [ OK ] ibf.throws (7 ms) 4: [ RUN ] ibf.given_cutoffs 4: [ OK ] ibf.given_cutoffs (1 ms) 4: [ RUN ] ibf.different_file_sizes 5: Running main() from ./googletest/src/gtest_main.cc 5: [==========] Running 4 tests from 1 test suite. 5: [----------] Global test environment set-up. 5: [----------] 4 tests from ibfmin 5: [ RUN ] ibfmin.given_expression_thresholds 5: [ OK ] ibfmin.given_expression_thresholds (0 ms) 5: [ RUN ] ibfmin.no_given_expression_thresholds 5: [ OK ] ibfmin.no_given_expression_thresholds (0 ms) 5: [ RUN ] ibfmin.expression_thresholds_by_genome 5: [ OK ] ibfmin.expression_thresholds_by_genome (2 ms) 5: [ RUN ] ibfmin.different_shape 5: [ OK ] ibfmin.different_shape (1 ms) 5: [----------] 4 tests from ibfmin (5 ms total) 5: 5: [----------] Global test environment tear-down 5: [==========] 4 tests from 1 test suite ran. (5 ms total) 5: [ PASSED ] 4 tests. 6: Running main() from ./googletest/src/gtest_main.cc 6: [==========] Running 8 tests from 1 test suite. 6: [----------] Global test environment set-up. 6: [----------] 8 tests from minimiser 6: [ RUN ] minimiser.small_example 6: [ OK ] minimiser.small_example (16 ms) 6: [ RUN ] minimiser.small_example_different_shape 6: [ OK ] minimiser.small_example_different_shape (1 ms) 6: [ RUN ] minimiser.small_example_samplewise 6: [ OK ] minimiser.small_example_samplewise (0 ms) 6: [ RUN ] minimiser.cutoff_by_filesize 6: [ OK ] minimiser.cutoff_by_filesize (0 ms) 6: [ RUN ] minimiser.small_example_two_threads 6: [ OK ] minimiser.small_example_two_threads (2 ms) 6: [ RUN ] minimiser.small_example_include 6: [ OK ] minimiser.small_example_include (0 ms) 6: [ RUN ] minimiser.small_example_exclude 6: [ OK ] minimiser.small_example_exclude (0 ms) 6: [ RUN ] minimiser.small_example_shape 6: [ OK ] minimiser.small_example_shape (1 ms) 6: [----------] 8 tests from minimiser (25 ms total) 6: 6: [----------] Global test environment tear-down 6: [==========] 8 tests from 1 test suite ran. (25 ms total) 6: [ PASSED ] 8 tests. 7: Running main() from ./googletest/src/gtest_main.cc 7: [==========] Running 2 tests from 1 test suite. 7: [----------] Global test environment set-up. 7: [----------] 2 tests from needle_options_test 7: [ RUN ] needle_options_test.no_options 7: [ OK ] needle_options_test.no_options (64 ms) 7: [ RUN ] needle_options_test.fail_no_argument 8: Running main() from ./googletest/src/gtest_main.cc 8: [==========] Running 19 tests from 1 test suite. 8: [----------] Global test environment set-up. 8: [----------] 19 tests from ibf_options_test 8: [ RUN ] ibf_options_test.ibf_no_options 8: [ OK ] ibf_options_test.ibf_no_options (56 ms) 8: [ RUN ] ibf_options_test.ibf_fail_no_argument 9: Running main() from ./googletest/src/gtest_main.cc 9: [==========] Running 3 tests from 1 test suite. 9: [----------] Global test environment set-up. 9: [----------] 3 tests from insert_options_test 9: [ RUN ] insert_options_test.insert_no_options 9: [ OK ] insert_options_test.insert_no_options (46 ms) 9: [ RUN ] insert_options_test.insert_fail_no_argument 10: Running main() from ./googletest/src/gtest_main.cc 10: [==========] Running 8 tests from 1 test suite. 10: [----------] Global test environment set-up. 10: [----------] 8 tests from minimiser_options_test 10: [ RUN ] minimiser_options_test.no_options 11: Running main() from ./googletest/src/gtest_main.cc 11: [==========] Running 5 tests from 1 test suite. 11: [----------] Global test environment set-up. 11: [----------] 5 tests from estimate_options_test 11: [ RUN ] estimate_options_test.no_options 12: Running main() from ./googletest/src/gtest_main.cc 12: [==========] Running 8 tests from 2 test suites. 12: [----------] Global test environment set-up. 12: [----------] 5 tests from count_options_test 12: [ RUN ] count_options_test.no_options 1/13 Test #1: test/api/count_test ............... Passed 0.17 sec 2/13 Test #5: test/api/ibfmin_test .............. Passed 0.11 sec 3/13 Test #6: test/api/minimiser_test ........... Passed 0.11 sec 10: [ OK ] minimiser_options_test.no_options (28 ms) 10: [ RUN ] minimiser_options_test.fail_no_argument 13: Running main() from ./googletest/src/gtest_main.cc 13: [==========] Running 2 tests from 1 test suite. 13: [----------] Global test environment set-up. 13: [----------] 2 tests from delete_options_test 13: [ RUN ] delete_options_test.delete_no_options 11: [ OK ] estimate_options_test.no_options (35 ms) 11: [ RUN ] estimate_options_test.fail_no_argument 7: [ OK ] needle_options_test.fail_no_argument (28 ms) 7: [----------] 2 tests from needle_options_test (92 ms total) 7: 7: [----------] Global test environment tear-down 7: [==========] 2 tests from 1 test suite ran. (93 ms total) 7: [ PASSED ] 2 tests. 4/13 Test #7: test/cli/needle_options_test ...... Passed 0.10 sec 13: [ OK ] delete_options_test.delete_no_options (18 ms) 13: [ RUN ] delete_options_test.with_argument 8: [ OK ] ibf_options_test.ibf_fail_no_argument (35 ms) 8: [ RUN ] ibf_options_test.ibf_fail_contradiction 12: [ OK ] count_options_test.no_options (41 ms) 12: [ RUN ] count_options_test.fail_no_argument 9: [ OK ] insert_options_test.insert_fail_no_argument (36 ms) 9: [ RUN ] insert_options_test.with_argument 2: [ OK ] delete.no_given_thresholds (143 ms) 2: [----------] 1 test from delete (143 ms total) 2: 2: [----------] 8 tests from insert 2: [ RUN ] insert.ibf 10: [ OK ] minimiser_options_test.fail_no_argument (35 ms) 10: [ RUN ] minimiser_options_test.with_arguments 11: [ OK ] estimate_options_test.fail_no_argument (30 ms) 11: [ RUN ] estimate_options_test.with_argument 12: [ OK ] count_options_test.fail_no_argument (20 ms) 12: [ RUN ] count_options_test.with_arguments 8: [ OK ] ibf_options_test.ibf_fail_contradiction (40 ms) 8: [ RUN ] ibf_options_test.ibf_fail_contradiction2 10: [ OK ] minimiser_options_test.with_arguments (47 ms) 10: [ RUN ] minimiser_options_test.cutoff 12: [ OK ] count_options_test.with_arguments (55 ms) 12: [ RUN ] count_options_test.multithreads 3: [ OK ] estimate.small_example_uncompressed (192 ms) 3: [ RUN ] estimate.small_example_gene_not_found 3: [ OK ] estimate.small_example_gene_not_found (1 ms) 3: [ RUN ] estimate.small_example_different_expressions_per_level 3: [ OK ] estimate.small_example_different_expressions_per_level (5 ms) 3: [ RUN ] estimate.small_example_different_expressions_per_level_normalization_1 10: [ OK ] minimiser_options_test.cutoff (35 ms) 10: [ RUN ] minimiser_options_test.multiple_sample 3: [ OK ] estimate.small_example_different_expressions_per_level_normalization_1 (11 ms) 3: [ RUN ] estimate.small_example_different_expressions_per_level_normalization_1_uncompressed 3: [ OK ] estimate.small_example_different_expressions_per_level_normalization_1_uncompressed (4 ms) 3: [ RUN ] estimate.example 12: [ OK ] count_options_test.multithreads (35 ms) 12: [ RUN ] count_options_test.paired 8: [ OK ] ibf_options_test.ibf_fail_contradiction2 (79 ms) 8: [ RUN ] ibf_options_test.ibf_fail_no_fpr 10: [ OK ] minimiser_options_test.multiple_sample (47 ms) 10: [ RUN ] minimiser_options_test.multithreads 8: [ OK ] ibf_options_test.ibf_fail_no_fpr (48 ms) 8: [ RUN ] ibf_options_test.ibf_fail_incorrect_number_of_fprs 12: [ OK ] count_options_test.paired (79 ms) 12: [----------] 5 tests from count_options_test (233 ms total) 12: 12: [----------] 3 tests from genome_options_test 12: [ RUN ] genome_options_test.no_options 8: [ OK ] ibf_options_test.ibf_fail_incorrect_number_of_fprs (47 ms) 8: [ RUN ] ibf_options_test.ibf_with_argument 10: [ OK ] minimiser_options_test.multithreads (340 ms) 10: [ RUN ] minimiser_options_test.paired 2: [ OK ] insert.ibf (485 ms) 2: [ RUN ] insert.ibf_no_given_thresholds 12: [ OK ] genome_options_test.no_options (301 ms) 12: [ RUN ] genome_options_test.fail_no_argument 12: [ OK ] genome_options_test.fail_no_argument (36 ms) 12: [ RUN ] genome_options_test.with_arguments 10: [ OK ] minimiser_options_test.paired (107 ms) 10: [ RUN ] minimiser_options_test.invalid_argument 12: [ OK ] genome_options_test.with_arguments (69 ms) 12: [----------] 3 tests from genome_options_test (408 ms total) 12: 12: [----------] Global test environment tear-down 12: [==========] 8 tests from 2 test suites ran. (641 ms total) 12: [ PASSED ] 8 tests. 5/13 Test #12: test/cli/count_options_test ....... Passed 0.65 sec 10: [ OK ] minimiser_options_test.invalid_argument (105 ms) 10: [----------] 8 tests from minimiser_options_test (749 ms total) 10: 10: [----------] Global test environment tear-down 10: [==========] 8 tests from 1 test suite ran. (750 ms total) 10: [ PASSED ] 8 tests. 6/13 Test #10: test/cli/minimiser_options_test ... Passed 0.78 sec 2: [ OK ] insert.ibf_no_given_thresholds (559 ms) 2: [ RUN ] insert.ibf_delete 2: [ OK ] insert.ibf_delete (1742 ms) 2: [ RUN ] insert.ibf_delete_no_given_threshold 2: [ OK ] insert.ibf_delete_no_given_threshold (1350 ms) 2: [ RUN ] insert.ibfmin 2: [ OK ] insert.ibfmin (133 ms) 2: [ RUN ] insert.ibfmin_delete 2: [ OK ] insert.ibfmin_delete (523 ms) 2: [ RUN ] insert.ibfmin_no_given_thresholds 2: [ OK ] insert.ibfmin_no_given_thresholds (113 ms) 2: [ RUN ] insert.delete_ibfmin_no_given_thresholds 2: [ OK ] insert.delete_ibfmin_no_given_thresholds (258 ms) 2: [----------] 8 tests from insert (5167 ms total) 2: 2: [----------] Global test environment tear-down 2: [==========] 9 tests from 2 test suites ran. (5311 ms total) 2: [ PASSED ] 9 tests. 7/13 Test #2: test/api/insert_delete_test ....... Passed 5.35 sec 4: [ OK ] ibf.different_file_sizes (8722 ms) 4: [----------] 8 tests from ibf (8743 ms total) 4: 4: [----------] Global test environment tear-down 4: [==========] 8 tests from 1 test suite ran. (8743 ms total) 4: [ PASSED ] 8 tests. 8/13 Test #4: test/api/ibf_test ................. Passed 8.77 sec 3: [ OK ] estimate.example (55194 ms) 3: [ RUN ] estimate.example_multiple_threads 9: [ OK ] insert_options_test.with_argument (87891 ms) 9: [----------] 3 tests from insert_options_test (87974 ms total) 9: 9: [----------] Global test environment tear-down 9: [==========] 3 tests from 1 test suite ran. (87974 ms total) 9: [ PASSED ] 3 tests. 9/13 Test #9: test/cli/insert_options_test ...... Passed 88.00 sec 8: [ OK ] ibf_options_test.ibf_with_argument (96136 ms) 8: [ RUN ] ibf_options_test.ibf_with_argument_with_options 3: [ OK ] estimate.example_multiple_threads (48427 ms) 3: [ RUN ] estimate.example_different_expressions_per_level 11: [ OK ] estimate_options_test.with_argument (105054 ms) 11: [ RUN ] estimate_options_test.with_argument_normalization_method 3: [ OK ] estimate.example_different_expressions_per_level (2136 ms) 3: [ RUN ] estimate.example_different_expressions_per_level_multiple_threads 3: [ OK ] estimate.example_different_expressions_per_level_multiple_threads (3394 ms) 3: [----------] 10 tests from estimate (109384 ms total) 3: 3: [----------] Global test environment tear-down 3: [==========] 10 tests from 1 test suite ran. (109384 ms total) 3: [ PASSED ] 10 tests. 10/13 Test #3: test/api/estimate_test ............ Passed 109.45 sec 8: [ OK ] ibf_options_test.ibf_with_argument_with_options (90172 ms) 8: [ RUN ] ibf_options_test.ibf_with_argument_with_userdefined_shape 13: [ OK ] delete_options_test.with_argument (256950 ms) 13: [----------] 2 tests from delete_options_test (256973 ms total) 13: 13: [----------] Global test environment tear-down 13: [==========] 2 tests from 1 test suite ran. (256973 ms total) 13: [ PASSED ] 2 tests. 11/13 Test #13: test/cli/delete_options_test ...... Passed 257.00 sec 11: [ OK ] estimate_options_test.with_argument_normalization_method (154642 ms) 11: [ RUN ] estimate_options_test.with_argument_out 8: [ OK ] ibf_options_test.ibf_with_argument_with_userdefined_shape (100835 ms) 8: [ RUN ] ibf_options_test.ibfmin_no_options 8: [ OK ] ibf_options_test.ibfmin_no_options (20 ms) 8: [ RUN ] ibf_options_test.ibfmin_fail_no_argument 8: [ OK ] ibf_options_test.ibfmin_fail_no_argument (174 ms) 8: [ RUN ] ibf_options_test.ibfmin_fail_contradiction 8: [ OK ] ibf_options_test.ibfmin_fail_contradiction (33 ms) 8: [ RUN ] ibf_options_test.ibfmin_fail_contradiction2 8: [ OK ] ibf_options_test.ibfmin_fail_contradiction2 (115 ms) 8: [ RUN ] ibf_options_test.ibfmin_fail_no_fpr 8: [ OK ] ibf_options_test.ibfmin_fail_no_fpr (21 ms) 8: [ RUN ] ibf_options_test.ibfmin_fail_incorrect_number_of_fprs 8: [ OK ] ibf_options_test.ibfmin_fail_incorrect_number_of_fprs (26 ms) 8: [ RUN ] ibf_options_test.ibfmin_with_argument 8: [ OK ] ibf_options_test.ibfmin_with_argument (33 ms) 8: [ RUN ] ibf_options_test.compressed 8: [ OK ] ibf_options_test.compressed (130 ms) 8: [ RUN ] ibf_options_test.more_hash_functions 8: [ OK ] ibf_options_test.more_hash_functions (228 ms) 8: [ RUN ] ibf_options_test.expression_thresholds 8: [ OK ] ibf_options_test.expression_thresholds (31 ms) 8: [----------] 19 tests from ibf_options_test (288268 ms total) 8: 8: [----------] Global test environment tear-down 8: [==========] 19 tests from 1 test suite ran. (288276 ms total) 8: [ PASSED ] 19 tests. 12/13 Test #8: test/cli/ibf_options_test ......... Passed 288.35 sec 11: [ OK ] estimate_options_test.with_argument_out (42915 ms) 11: [----------] 5 tests from estimate_options_test (302679 ms total) 11: 11: [----------] Global test environment tear-down 11: [==========] 5 tests from 1 test suite ran. (302690 ms total) 11: [ PASSED ] 5 tests. 13/13 Test #11: test/cli/estimate_options_test .... Passed 302.73 sec 100% tests passed, 0 tests failed out of 13 Total Test time (real) = 1083.17 sec make[1]: Leaving directory '/build/reproducible-path/seqan-needle-1.0.2+ds/obj-x86_64-linux-gnu' create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install dh_install dh_installdocs dh_installchangelogs dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'seqan-needle-doc' in '../seqan-needle-doc_1.0.2+ds-2_all.deb'. dpkg-deb: building package 'seqan-needle' in '../seqan-needle_1.0.2+ds-2_amd64.deb'. dpkg-deb: building package 'seqan-needle-dbgsym' in '../seqan-needle-dbgsym_1.0.2+ds-2_amd64.deb'. dpkg-genbuildinfo --build=binary -O../seqan-needle_1.0.2+ds-2_amd64.buildinfo dpkg-genchanges --build=binary -O../seqan-needle_1.0.2+ds-2_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/2525188 and its subdirectories I: Current time: Fri May 10 22:45:09 -12 2024 I: pbuilder-time-stamp: 1715424309 Sat May 11 10:45:11 UTC 2024 I: 1st build successful. Starting 2nd build on remote node ionos15-amd64.debian.net. Sat May 11 10:45:11 UTC 2024 I: Preparing to do remote build '2' on ionos15-amd64.debian.net. Sat May 11 10:51:00 UTC 2024 I: Deleting $TMPDIR on ionos15-amd64.debian.net. Sat May 11 10:51:01 UTC 2024 I: seqan-needle_1.0.2+ds-2_amd64.changes: Format: 1.8 Date: Mon, 08 Jan 2024 11:38:37 +0100 Source: seqan-needle Binary: seqan-needle seqan-needle-dbgsym seqan-needle-doc Architecture: amd64 all Version: 1.0.2+ds-2 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Komolehin Israel Timilehin Description: seqan-needle - pre-filter for the counting of very large collections of nucleoti seqan-needle-doc - HTML documentation for seqan-needle and its APIs Closes: 1048377 Changes: seqan-needle (1.0.2+ds-2) unstable; urgency=medium . * Team upload. . [ Michael R. Crusoe ] * d/clean: remove HTML build of the documentation. Closes: #1048377 * corrected some patch metadata. . [ Komolehin Israel Timilehin ] * Added Autopkgtest Checksums-Sha1: 24740ef996ca60733e9913b412f9549928f157d9 6637972 seqan-needle-dbgsym_1.0.2+ds-2_amd64.deb 78e841825d55f26afa843eb2b1961971940f1687 115368 seqan-needle-doc_1.0.2+ds-2_all.deb 1b6fad7e027299a40bfeb96c8842122b2d033904 7052 seqan-needle_1.0.2+ds-2_amd64.buildinfo 0aa90d8e9f1450217f7ee4617a1d530d3635fddd 353516 seqan-needle_1.0.2+ds-2_amd64.deb Checksums-Sha256: ae665897a45db580d8b767451c00aca76d9271c03423288088a8e7877d5292bd 6637972 seqan-needle-dbgsym_1.0.2+ds-2_amd64.deb fd3990d0c82b2347254e1b02b7d4541f6aafd57c7e271f1565efdd376125c687 115368 seqan-needle-doc_1.0.2+ds-2_all.deb 69b2c05866e34ab2815ddea8b6722b2c135176cc1ef952a3d8a0080c3e67f925 7052 seqan-needle_1.0.2+ds-2_amd64.buildinfo 30cab96ede5bad97df352a1f978010e74d269098a365ea5ba91f268374a96dc2 353516 seqan-needle_1.0.2+ds-2_amd64.deb Files: 94ce44edec3385a34fdd4d69d3cdc632 6637972 debug optional seqan-needle-dbgsym_1.0.2+ds-2_amd64.deb c6e1f539210c0d15c6cff095d738cf25 115368 doc optional seqan-needle-doc_1.0.2+ds-2_all.deb c2cfc9d35c1f0a7104df803b19051cba 7052 science optional seqan-needle_1.0.2+ds-2_amd64.buildinfo 5a224a2853626aef734d5ccaa98a8407 353516 science optional seqan-needle_1.0.2+ds-2_amd64.deb Sat May 11 10:51:02 UTC 2024 I: diffoscope 265 will be used to compare the two builds: Running as unit: rb-diffoscope-amd64_23-19532.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.QBF952Fg/seqan-needle_1.0.2+ds-2.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.QBF952Fg/seqan-needle_1.0.2+ds-2.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.QBF952Fg/seqan-needle_1.0.2+ds-2.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.QBF952Fg/b1/seqan-needle_1.0.2+ds-2_amd64.changes /srv/reproducible-results/rbuild-debian/r-b-build.QBF952Fg/b2/seqan-needle_1.0.2+ds-2_amd64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.436s) 0.436s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.090s) 0.090s 12 calls diffoscope.comparators.binary.FilesystemFile ## specialize (total time: 0.000s) 0.000s 1 call specialize Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 776ms CPU time consumed: 776ms Sat May 11 10:51:03 UTC 2024 I: diffoscope 265 found no differences in the changes files, and a .buildinfo file also exists. Sat May 11 10:51:03 UTC 2024 I: seqan-needle from trixie built successfully and reproducibly on amd64. Sat May 11 10:51:04 UTC 2024 I: Submitting .buildinfo files to external archives: Sat May 11 10:51:04 UTC 2024 I: Submitting 8.0K b1/seqan-needle_1.0.2+ds-2_amd64.buildinfo.asc Sat May 11 10:51:05 UTC 2024 I: Submitting 8.0K b2/seqan-needle_1.0.2+ds-2_amd64.buildinfo.asc Sat May 11 10:51:06 UTC 2024 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Sat May 11 10:51:06 UTC 2024 I: Done submitting .buildinfo files. Sat May 11 10:51:06 UTC 2024 I: Removing signed seqan-needle_1.0.2+ds-2_amd64.buildinfo.asc files: removed './b1/seqan-needle_1.0.2+ds-2_amd64.buildinfo.asc' removed './b2/seqan-needle_1.0.2+ds-2_amd64.buildinfo.asc'