Mon Dec 9 20:06:33 UTC 2024 I: starting to build pynwb/trixie/amd64 on jenkins on '2024-12-09 20:02' Mon Dec 9 20:06:33 UTC 2024 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/amd64_29/27876/console.log Mon Dec 9 20:06:33 UTC 2024 I: Downloading source for trixie/pynwb=2.8.2-2 --2024-12-09 20:06:33-- http://deb.debian.org/debian/pool/main/p/pynwb/pynwb_2.8.2-2.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2406 (2.3K) [text/prs.lines.tag] Saving to: ‘pynwb_2.8.2-2.dsc’ 0K .. 100% 266M=0s 2024-12-09 20:06:33 (266 MB/s) - ‘pynwb_2.8.2-2.dsc’ saved [2406/2406] Mon Dec 9 20:06:33 UTC 2024 I: pynwb_2.8.2-2.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: pynwb Binary: python3-pynwb Architecture: all Version: 2.8.2-2 Maintainer: Debian Med Packaging Team Uploaders: Yaroslav Halchenko , Étienne Mollier Homepage: https://github.com/NeurodataWithoutBorders/pynwb Standards-Version: 4.7.0 Vcs-Browser: https://salsa.debian.org/med-team/pynwb Vcs-Git: https://salsa.debian.org/med-team/pynwb.git Testsuite: autopkgtest-pkg-python Build-Depends: debhelper-compat (= 13), dh-sequence-python3, pybuild-plugin-pyproject, python3-all, python3-dateutil, python3-h5py (>= 2.10), python3-hatchling, python3-hatch-vcs, python3-hdmf (>= 3.9.0~), python3-numpy, python3-pandas, python3-requests, python3-setuptools, python3-pytest, python3-coverage Package-List: python3-pynwb deb python optional arch=all Checksums-Sha1: 9b3ed1830d68be974a8449de0152b4ba4906f47e 34771929 pynwb_2.8.2.orig.tar.gz b81e5baf948589c2df91a2534a33a900b73fa437 5040 pynwb_2.8.2-2.debian.tar.xz Checksums-Sha256: 53b70d02951803f908678ccbe3aa8851c5997589bf1718830bf6a45bc550a2d8 34771929 pynwb_2.8.2.orig.tar.gz cf18dc4f254f2460fdcfd52bcde241611bcff1b0a236fb50f681dabaa23248d7 5040 pynwb_2.8.2-2.debian.tar.xz Files: 8f71e60abdaad10654183e9539b6408d 34771929 pynwb_2.8.2.orig.tar.gz a8e02147faba72433b6b3c7b3858fed2 5040 pynwb_2.8.2-2.debian.tar.xz Dgit: 023e8344d7ac71c9604f2956437d18eb7407b5b6 debian archive/debian/2.8.2-2 https://git.dgit.debian.org/pynwb -----BEGIN PGP SIGNATURE----- iQJIBAEBCgAyFiEEj5GyJ8fW8rGUjII2eTz2fo8NEdoFAmcIJ0IUHGVtb2xsaWVy QGRlYmlhbi5vcmcACgkQeTz2fo8NEdrALA/+OBkX3umm4yEUjs1MpMq+QMsIuFVd pbzMSyryOTAS7HbiBe6843pWbPgVwaFjD3xweoblDZhV6iSCqps3u1Pn5jDdkwRf /yGprsNV+OibGVR+LrvbgTbk4yHR2TMI9way6qVHyKEjcQ24Ic8R0CAuU0dQssT6 9Ru7iPLqVpBL0952eIWrkeFqczWg0MErZ5azMld/ln1e9WGf6nCoeo+PSsrnD9jC GYdsQ6+GRMnYqPGz8GChZwW1WjxKL6RQbTWLGNtiDWiBWBeo8g2oqjzP6ShJ6RRA kd0bWOn6JQJB/yLHe94rZdxlhxyAo7jZvMYs+t5r7lgb/hIHqTvy7luZbmMOjGA9 5Y40WPqn4BjvvwJs3tzqIwMpQHNq+xkYflavCJ4iFCYqf9ji5vdBONHGnBhKGkRe EuZK4anf5eRumHtTpZSdpL/7bDIgZKOgdIpLJ4CS8nxM7CeluggAv+8tnr/3u9b0 mNHD9fctmiwyaoz8B1bqbRfk6cPwKsaLchKMHjmBPifw2gdw9JGHOvxm6mzLH1J9 3m1GXUbpnqwrvGhbSR137/wxBCyLvG4Slkmh42hVsqGG6QxUiuIgf9sjaNhiwcaJ 4V3GEev40fxI8Ya45e32K8aE9uFO3SfT3ALEb457yr/Ca7mxiUVubQdErv+t/RCw YTlNYUbAe7qhOFA= =7KGJ -----END PGP SIGNATURE----- Mon Dec 9 20:06:33 UTC 2024 I: Checking whether the package is not for us Mon Dec 9 20:06:33 UTC 2024 I: Starting 1st build on remote node ionos1-amd64.debian.net. Mon Dec 9 20:06:33 UTC 2024 I: Preparing to do remote build '1' on ionos1-amd64.debian.net. Mon Dec 9 20:20:23 UTC 2024 I: Deleting $TMPDIR on ionos1-amd64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Mon Dec 9 08:06:36 -12 2024 I: pbuilder-time-stamp: 1733774796 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [pynwb_2.8.2-2.dsc] I: copying [./pynwb_2.8.2.orig.tar.gz] I: copying [./pynwb_2.8.2-2.debian.tar.xz] I: Extracting source gpgv: Signature made Thu Oct 10 19:13:06 2024 gpgv: using RSA key 8F91B227C7D6F2B1948C8236793CF67E8F0D11DA gpgv: issuer "emollier@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./pynwb_2.8.2-2.dsc: no acceptable signature found dpkg-source: info: extracting pynwb in pynwb-2.8.2 dpkg-source: info: unpacking pynwb_2.8.2.orig.tar.gz dpkg-source: info: unpacking pynwb_2.8.2-2.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying fix-syntax-warnings.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/1015095/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='amd64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=20 ' DISTRIBUTION='trixie' HOME='/root' HOST_ARCH='amd64' IFS=' ' INVOCATION_ID='f64c240c571c45bb825a522dd42692fd' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='1015095' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.k5i5oyPN/pbuilderrc_exTn --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.k5i5oyPN/b1 --logfile b1/build.log pynwb_2.8.2-2.dsc' SUDO_GID='110' SUDO_UID='105' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://46.16.76.132:3128' I: uname -a Linux ionos1-amd64 6.1.0-28-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.119-1 (2024-11-22) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Nov 22 14:40 /bin -> usr/bin I: user script /srv/workspace/pbuilder/1015095/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-sequence-python3, pybuild-plugin-pyproject, python3-all, python3-dateutil, python3-h5py (>= 2.10), python3-hatchling, python3-hatch-vcs, python3-hdmf (>= 3.9.0~), python3-numpy, python3-pandas, python3-requests, python3-setuptools, python3-pytest, python3-coverage dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19967 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-sequence-python3; however: Package dh-sequence-python3 is not installed. pbuilder-satisfydepends-dummy depends on pybuild-plugin-pyproject; however: Package pybuild-plugin-pyproject is not installed. pbuilder-satisfydepends-dummy depends on python3-all; however: Package python3-all is not installed. pbuilder-satisfydepends-dummy depends on python3-dateutil; however: Package python3-dateutil is not installed. pbuilder-satisfydepends-dummy depends on python3-h5py (>= 2.10); however: Package python3-h5py is not installed. pbuilder-satisfydepends-dummy depends on python3-hatchling; however: Package python3-hatchling is not installed. pbuilder-satisfydepends-dummy depends on python3-hatch-vcs; however: Package python3-hatch-vcs is not installed. pbuilder-satisfydepends-dummy depends on python3-hdmf (>= 3.9.0~); however: Package python3-hdmf is not installed. pbuilder-satisfydepends-dummy depends on python3-numpy; however: Package python3-numpy is not installed. pbuilder-satisfydepends-dummy depends on python3-pandas; however: Package python3-pandas is not installed. pbuilder-satisfydepends-dummy depends on python3-requests; however: Package python3-requests is not installed. pbuilder-satisfydepends-dummy depends on python3-setuptools; however: Package python3-setuptools is not installed. pbuilder-satisfydepends-dummy depends on python3-pytest; however: Package python3-pytest is not installed. pbuilder-satisfydepends-dummy depends on python3-coverage; however: Package python3-coverage is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} ca-certificates{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libaec0{a} libarchive-zip-perl{a} libblas3{a} libbrotli1{a} libcom-err2{a} libcurl4t64{a} libdebhelper-perl{a} libelf1t64{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libgfortran5{a} libgssapi-krb5-2{a} libhdf5-103-1t64{a} libhdf5-hl-100t64{a} libicu72{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} liblapack3{a} liblbfgsb0{a} libldap-2.5-0{a} liblzf1{a} libmagic-mgc{a} libmagic1t64{a} libnghttp2-14{a} libnsl2{a} libpipeline1{a} libpsl5t64{a} libpython3-stdlib{a} libpython3.12-minimal{a} libpython3.12-stdlib{a} libpython3.13-minimal{a} libpython3.13-stdlib{a} libreadline8t64{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libssh2-1t64{a} libsz2{a} libtirpc-common{a} libtirpc3t64{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} media-types{a} netbase{a} openssl{a} po-debconf{a} pybuild-plugin-pyproject{a} python3{a} python3-all{a} python3-attr{a} python3-autocommand{a} python3-build{a} python3-certifi{a} python3-chardet{a} python3-charset-normalizer{a} python3-coverage{a} python3-dateutil{a} python3-decorator{a} python3-h5py{a} python3-h5py-serial{a} python3-hatch-vcs{a} python3-hatchling{a} python3-hdmf{a} python3-idna{a} python3-inflect{a} python3-iniconfig{a} python3-installer{a} python3-jaraco.context{a} python3-jaraco.functools{a} python3-jaraco.text{a} python3-jsonschema{a} python3-jsonschema-specifications{a} python3-minimal{a} python3-more-itertools{a} python3-numpy{a} python3-packaging{a} python3-pandas{a} python3-pandas-lib{a} python3-pathspec{a} python3-pkg-resources{a} python3-pluggy{a} python3-pyproject-hooks{a} python3-pytest{a} python3-referencing{a} python3-requests{a} python3-rpds-py{a} python3-ruamel.yaml{a} python3-ruamel.yaml.clib{a} python3-scipy{a} python3-setuptools{a} python3-setuptools-scm{a} python3-toml{a} python3-trove-classifiers{a} python3-typeguard{a} python3-typing-extensions{a} python3-tz{a} python3-urllib3{a} python3-wheel{a} python3-zipp{a} python3.12{a} python3.12-minimal{a} python3.13{a} python3.13-minimal{a} readline-common{a} sensible-utils{a} tzdata{a} The following packages are RECOMMENDED but will NOT be installed: curl krb5-locales libarchive-cpio-perl libldap-common libltdl-dev libmail-sendmail-perl libsasl2-modules lynx publicsuffix python3-bottleneck python3-bs4 python3-html5lib python3-jinja2 python3-json-pointer python3-lxml python3-matplotlib python3-numexpr python3-odf python3-openpyxl python3-pil python3-pygments python3-rfc3987 python3-tables python3-uritemplate python3-webcolors wget 0 packages upgraded, 127 newly installed, 0 to remove and 0 not upgraded. Need to get 81.0 MB of archives. After unpacking 399 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main amd64 libpython3.12-minimal amd64 3.12.8-1 [815 kB] Get: 2 http://deb.debian.org/debian trixie/main amd64 libexpat1 amd64 2.6.4-1 [106 kB] Get: 3 http://deb.debian.org/debian trixie/main amd64 python3.12-minimal amd64 3.12.8-1 [2163 kB] Get: 4 http://deb.debian.org/debian trixie/main amd64 python3-minimal amd64 3.12.6-1 [26.7 kB] Get: 5 http://deb.debian.org/debian trixie/main amd64 media-types all 10.1.0 [26.9 kB] Get: 6 http://deb.debian.org/debian trixie/main amd64 netbase all 6.4 [12.8 kB] Get: 7 http://deb.debian.org/debian trixie/main amd64 tzdata all 2024b-4 [256 kB] Get: 8 http://deb.debian.org/debian trixie/main amd64 libkrb5support0 amd64 1.21.3-3 [32.5 kB] Get: 9 http://deb.debian.org/debian trixie/main amd64 libcom-err2 amd64 1.47.2~rc1-2 [23.8 kB] Get: 10 http://deb.debian.org/debian trixie/main amd64 libk5crypto3 amd64 1.21.3-3 [79.9 kB] Get: 11 http://deb.debian.org/debian trixie/main amd64 libkeyutils1 amd64 1.6.3-4 [9092 B] Get: 12 http://deb.debian.org/debian trixie/main amd64 libkrb5-3 amd64 1.21.3-3 [324 kB] Get: 13 http://deb.debian.org/debian trixie/main amd64 libgssapi-krb5-2 amd64 1.21.3-3 [136 kB] Get: 14 http://deb.debian.org/debian trixie/main amd64 libtirpc-common all 1.3.4+ds-1.3 [10.9 kB] Get: 15 http://deb.debian.org/debian trixie/main amd64 libtirpc3t64 amd64 1.3.4+ds-1.3+b1 [83.1 kB] Get: 16 http://deb.debian.org/debian trixie/main amd64 libnsl2 amd64 1.3.0-3+b3 [40.6 kB] Get: 17 http://deb.debian.org/debian trixie/main amd64 readline-common all 8.2-5 [69.3 kB] Get: 18 http://deb.debian.org/debian trixie/main amd64 libreadline8t64 amd64 8.2-5 [169 kB] Get: 19 http://deb.debian.org/debian trixie/main amd64 libpython3.12-stdlib amd64 3.12.8-1 [1970 kB] Get: 20 http://deb.debian.org/debian trixie/main amd64 python3.12 amd64 3.12.8-1 [677 kB] Get: 21 http://deb.debian.org/debian trixie/main amd64 libpython3-stdlib amd64 3.12.6-1 [9692 B] Get: 22 http://deb.debian.org/debian trixie/main amd64 python3 amd64 3.12.6-1 [27.8 kB] Get: 23 http://deb.debian.org/debian trixie/main amd64 libpython3.13-minimal amd64 3.13.1-1 [857 kB] Get: 24 http://deb.debian.org/debian trixie/main amd64 python3.13-minimal amd64 3.13.1-1 [2201 kB] Get: 25 http://deb.debian.org/debian trixie/main amd64 sensible-utils all 0.0.24 [24.8 kB] Get: 26 http://deb.debian.org/debian trixie/main amd64 openssl amd64 3.3.2-2 [1382 kB] Get: 27 http://deb.debian.org/debian trixie/main amd64 ca-certificates all 20240203 [158 kB] Get: 28 http://deb.debian.org/debian trixie/main amd64 libmagic-mgc amd64 1:5.45-3+b1 [314 kB] Get: 29 http://deb.debian.org/debian trixie/main amd64 libmagic1t64 amd64 1:5.45-3+b1 [108 kB] Get: 30 http://deb.debian.org/debian trixie/main amd64 file amd64 1:5.45-3+b1 [43.3 kB] Get: 31 http://deb.debian.org/debian trixie/main amd64 gettext-base amd64 0.22.5-2 [200 kB] Get: 32 http://deb.debian.org/debian trixie/main amd64 libuchardet0 amd64 0.0.8-1+b2 [68.9 kB] Get: 33 http://deb.debian.org/debian trixie/main amd64 groff-base amd64 1.23.0-5 [1181 kB] Get: 34 http://deb.debian.org/debian trixie/main amd64 bsdextrautils amd64 2.40.2-12 [92.0 kB] Get: 35 http://deb.debian.org/debian trixie/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB] Get: 36 http://deb.debian.org/debian trixie/main amd64 man-db amd64 2.13.0-1 [1420 kB] Get: 37 http://deb.debian.org/debian trixie/main amd64 m4 amd64 1.4.19-4 [287 kB] Get: 38 http://deb.debian.org/debian trixie/main amd64 autoconf all 2.72-3 [493 kB] Get: 39 http://deb.debian.org/debian trixie/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get: 40 http://deb.debian.org/debian trixie/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get: 41 http://deb.debian.org/debian trixie/main amd64 autopoint all 0.22.5-2 [723 kB] Get: 42 http://deb.debian.org/debian trixie/main amd64 libdebhelper-perl all 13.20 [89.7 kB] Get: 43 http://deb.debian.org/debian trixie/main amd64 libtool all 2.4.7-8 [517 kB] Get: 44 http://deb.debian.org/debian trixie/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 45 http://deb.debian.org/debian trixie/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 46 http://deb.debian.org/debian trixie/main amd64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 47 http://deb.debian.org/debian trixie/main amd64 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 48 http://deb.debian.org/debian trixie/main amd64 libelf1t64 amd64 0.192-4 [189 kB] Get: 49 http://deb.debian.org/debian trixie/main amd64 dwz amd64 0.15-1+b1 [110 kB] Get: 50 http://deb.debian.org/debian trixie/main amd64 libicu72 amd64 72.1-5+b1 [9423 kB] Get: 51 http://deb.debian.org/debian trixie/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.2+b1 [699 kB] Get: 52 http://deb.debian.org/debian trixie/main amd64 gettext amd64 0.22.5-2 [1601 kB] Get: 53 http://deb.debian.org/debian trixie/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 54 http://deb.debian.org/debian trixie/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 55 http://deb.debian.org/debian trixie/main amd64 debhelper all 13.20 [915 kB] Get: 56 http://deb.debian.org/debian trixie/main amd64 python3-autocommand all 2.2.2-3 [13.6 kB] Get: 57 http://deb.debian.org/debian trixie/main amd64 python3-more-itertools all 10.5.0-1 [63.8 kB] Get: 58 http://deb.debian.org/debian trixie/main amd64 python3-typing-extensions all 4.12.2-2 [73.0 kB] Get: 59 http://deb.debian.org/debian trixie/main amd64 python3-typeguard all 4.4.1-1 [37.0 kB] Get: 60 http://deb.debian.org/debian trixie/main amd64 python3-inflect all 7.3.1-2 [32.4 kB] Get: 61 http://deb.debian.org/debian trixie/main amd64 python3-jaraco.context all 6.0.0-1 [7984 B] Get: 62 http://deb.debian.org/debian trixie/main amd64 python3-jaraco.functools all 4.1.0-1 [12.0 kB] Get: 63 http://deb.debian.org/debian trixie/main amd64 python3-pkg-resources all 75.2.0-1 [213 kB] Get: 64 http://deb.debian.org/debian trixie/main amd64 python3-jaraco.text all 4.0.0-1 [11.4 kB] Get: 65 http://deb.debian.org/debian trixie/main amd64 python3-zipp all 3.21.0-1 [10.6 kB] Get: 66 http://deb.debian.org/debian trixie/main amd64 python3-setuptools all 75.2.0-1 [731 kB] Get: 67 http://deb.debian.org/debian trixie/main amd64 dh-python all 6.20241024 [109 kB] Get: 68 http://deb.debian.org/debian trixie/main amd64 libaec0 amd64 1.1.3-1+b1 [23.8 kB] Get: 69 http://deb.debian.org/debian trixie/main amd64 libblas3 amd64 3.12.0-4 [152 kB] Get: 70 http://deb.debian.org/debian trixie/main amd64 libbrotli1 amd64 1.1.0-2+b6 [302 kB] Get: 71 http://deb.debian.org/debian trixie/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg1-8 [19.6 kB] Get: 72 http://deb.debian.org/debian trixie/main amd64 libsasl2-2 amd64 2.1.28+dfsg1-8 [57.3 kB] Get: 73 http://deb.debian.org/debian trixie/main amd64 libldap-2.5-0 amd64 2.5.18+dfsg-3+b1 [188 kB] Get: 74 http://deb.debian.org/debian trixie/main amd64 libnghttp2-14 amd64 1.64.0-1 [75.5 kB] Get: 75 http://deb.debian.org/debian trixie/main amd64 libpsl5t64 amd64 0.21.2-1.1+b1 [57.2 kB] Get: 76 http://deb.debian.org/debian trixie/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b5 [58.8 kB] Get: 77 http://deb.debian.org/debian trixie/main amd64 libssh2-1t64 amd64 1.11.1-1 [245 kB] Get: 78 http://deb.debian.org/debian trixie/main amd64 libcurl4t64 amd64 8.11.0-1 [351 kB] Get: 79 http://deb.debian.org/debian trixie/main amd64 libgfortran5 amd64 14.2.0-8 [836 kB] Get: 80 http://deb.debian.org/debian trixie/main amd64 libsz2 amd64 1.1.3-1+b1 [8080 B] Get: 81 http://deb.debian.org/debian trixie/main amd64 libhdf5-103-1t64 amd64 1.10.10+repack-5+b1 [1254 kB] Get: 82 http://deb.debian.org/debian trixie/main amd64 libhdf5-hl-100t64 amd64 1.10.10+repack-5+b1 [64.2 kB] Get: 83 http://deb.debian.org/debian trixie/main amd64 liblapack3 amd64 3.12.0-4 [2450 kB] Get: 84 http://deb.debian.org/debian trixie/main amd64 liblbfgsb0 amd64 3.0+dfsg.4-1+b2 [29.4 kB] Get: 85 http://deb.debian.org/debian trixie/main amd64 liblzf1 amd64 3.6-4+b2 [10.1 kB] Get: 86 http://deb.debian.org/debian trixie/main amd64 libpython3.13-stdlib amd64 3.13.1-1 [1974 kB] Get: 87 http://deb.debian.org/debian trixie/main amd64 python3-packaging all 24.2-1 [55.3 kB] Get: 88 http://deb.debian.org/debian trixie/main amd64 python3-pyproject-hooks all 1.2.0-1 [11.7 kB] Get: 89 http://deb.debian.org/debian trixie/main amd64 python3-toml all 0.10.2-1 [16.2 kB] Get: 90 http://deb.debian.org/debian trixie/main amd64 python3-wheel all 0.45.1-1 [56.7 kB] Get: 91 http://deb.debian.org/debian trixie/main amd64 python3-build all 1.2.2-1 [36.0 kB] Get: 92 http://deb.debian.org/debian trixie/main amd64 python3-installer all 0.7.0+dfsg1-3 [18.6 kB] Get: 93 http://deb.debian.org/debian trixie/main amd64 pybuild-plugin-pyproject all 6.20241024 [11.4 kB] Get: 94 http://deb.debian.org/debian trixie/main amd64 python3-all amd64 3.12.6-1 [1040 B] Get: 95 http://deb.debian.org/debian trixie/main amd64 python3-attr all 23.2.0-2 [65.5 kB] Get: 96 http://deb.debian.org/debian trixie/main amd64 python3-certifi all 2024.8.30+dfsg-1 [9576 B] Get: 97 http://deb.debian.org/debian trixie/main amd64 python3-chardet all 5.2.0+dfsg-1 [107 kB] Get: 98 http://deb.debian.org/debian trixie/main amd64 python3-charset-normalizer amd64 3.4.0-1+b1 [140 kB] Get: 99 http://deb.debian.org/debian trixie/main amd64 python3.13 amd64 3.13.1-1 [740 kB] Get: 100 http://deb.debian.org/debian trixie/main amd64 python3-coverage amd64 7.6.0+dfsg1-2+b1 [177 kB] Get: 101 http://deb.debian.org/debian trixie/main amd64 python3-dateutil all 2.9.0-3 [79.3 kB] Get: 102 http://deb.debian.org/debian trixie/main amd64 python3-decorator all 5.1.1-5 [15.1 kB] Get: 103 http://deb.debian.org/debian trixie/main amd64 python3-numpy amd64 1:1.26.4+ds-12 [4738 kB] Get: 104 http://deb.debian.org/debian trixie/main amd64 python3-h5py-serial amd64 3.12.1-1 [1468 kB] Get: 105 http://deb.debian.org/debian trixie/main amd64 python3-h5py all 3.12.1-1 [15.0 kB] Get: 106 http://deb.debian.org/debian trixie/main amd64 python3-pathspec all 0.12.1-1 [28.1 kB] Get: 107 http://deb.debian.org/debian trixie/main amd64 python3-pluggy all 1.5.0-1 [26.9 kB] Get: 108 http://deb.debian.org/debian trixie/main amd64 python3-trove-classifiers all 2024.9.12-1 [10.2 kB] Get: 109 http://deb.debian.org/debian trixie/main amd64 python3-hatchling all 1.26.3-1 [47.0 kB] Get: 110 http://deb.debian.org/debian trixie/main amd64 python3-setuptools-scm all 8.1.0-1 [40.5 kB] Get: 111 http://deb.debian.org/debian trixie/main amd64 python3-hatch-vcs all 0.4.0-1 [8336 B] Get: 112 http://deb.debian.org/debian trixie/main amd64 python3-rpds-py amd64 0.21.0-2 [287 kB] Get: 113 http://deb.debian.org/debian trixie/main amd64 python3-referencing all 0.35.1-1 [23.5 kB] Get: 114 http://deb.debian.org/debian trixie/main amd64 python3-jsonschema-specifications all 2023.12.1-2 [9020 B] Get: 115 http://deb.debian.org/debian trixie/main amd64 python3-jsonschema all 4.19.2-5 [71.4 kB] Get: 116 http://deb.debian.org/debian trixie/main amd64 python3-tz all 2024.1-2 [30.9 kB] Get: 117 http://deb.debian.org/debian trixie/main amd64 python3-pandas-lib amd64 2.2.3+dfsg-5+b1 [7307 kB] Get: 118 http://deb.debian.org/debian trixie/main amd64 python3-pandas all 2.2.3+dfsg-5 [3096 kB] Get: 119 http://deb.debian.org/debian trixie/main amd64 python3-scipy amd64 1.13.1-6 [20.2 MB] Get: 120 http://deb.debian.org/debian trixie/main amd64 python3-ruamel.yaml.clib amd64 0.2.8+ds-2+b1 [179 kB] Get: 121 http://deb.debian.org/debian trixie/main amd64 python3-ruamel.yaml all 0.18.6+ds-3 [145 kB] Get: 122 http://deb.debian.org/debian trixie/main amd64 python3-hdmf all 3.14.5-1 [296 kB] Get: 123 http://deb.debian.org/debian trixie/main amd64 python3-idna all 3.8-2 [41.6 kB] Get: 124 http://deb.debian.org/debian trixie/main amd64 python3-iniconfig all 1.1.1-2 [6396 B] Get: 125 http://deb.debian.org/debian trixie/main amd64 python3-pytest all 8.3.3-1 [249 kB] Get: 126 http://deb.debian.org/debian trixie/main amd64 python3-urllib3 all 2.2.3-3 [112 kB] Get: 127 http://deb.debian.org/debian trixie/main amd64 python3-requests all 2.32.3+dfsg-1 [71.9 kB] Fetched 81.0 MB in 16s (5059 kB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libpython3.12-minimal:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19967 files and directories currently installed.) Preparing to unpack .../libpython3.12-minimal_3.12.8-1_amd64.deb ... Unpacking libpython3.12-minimal:amd64 (3.12.8-1) ... Selecting previously unselected package libexpat1:amd64. Preparing to unpack .../libexpat1_2.6.4-1_amd64.deb ... Unpacking libexpat1:amd64 (2.6.4-1) ... Selecting previously unselected package python3.12-minimal. Preparing to unpack .../python3.12-minimal_3.12.8-1_amd64.deb ... Unpacking python3.12-minimal (3.12.8-1) ... Setting up libpython3.12-minimal:amd64 (3.12.8-1) ... Setting up libexpat1:amd64 (2.6.4-1) ... Setting up python3.12-minimal (3.12.8-1) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20287 files and directories currently installed.) Preparing to unpack .../00-python3-minimal_3.12.6-1_amd64.deb ... Unpacking python3-minimal (3.12.6-1) ... Selecting previously unselected package media-types. Preparing to unpack .../01-media-types_10.1.0_all.deb ... Unpacking media-types (10.1.0) ... Selecting previously unselected package netbase. Preparing to unpack .../02-netbase_6.4_all.deb ... Unpacking netbase (6.4) ... Selecting previously unselected package tzdata. Preparing to unpack .../03-tzdata_2024b-4_all.deb ... Unpacking tzdata (2024b-4) ... Selecting previously unselected package libkrb5support0:amd64. Preparing to unpack .../04-libkrb5support0_1.21.3-3_amd64.deb ... Unpacking libkrb5support0:amd64 (1.21.3-3) ... Selecting previously unselected package libcom-err2:amd64. Preparing to unpack .../05-libcom-err2_1.47.2~rc1-2_amd64.deb ... Unpacking libcom-err2:amd64 (1.47.2~rc1-2) ... Selecting previously unselected package libk5crypto3:amd64. Preparing to unpack .../06-libk5crypto3_1.21.3-3_amd64.deb ... Unpacking libk5crypto3:amd64 (1.21.3-3) ... Selecting previously unselected package libkeyutils1:amd64. Preparing to unpack .../07-libkeyutils1_1.6.3-4_amd64.deb ... Unpacking libkeyutils1:amd64 (1.6.3-4) ... Selecting previously unselected package libkrb5-3:amd64. Preparing to unpack .../08-libkrb5-3_1.21.3-3_amd64.deb ... Unpacking libkrb5-3:amd64 (1.21.3-3) ... Selecting previously unselected package libgssapi-krb5-2:amd64. Preparing to unpack .../09-libgssapi-krb5-2_1.21.3-3_amd64.deb ... Unpacking libgssapi-krb5-2:amd64 (1.21.3-3) ... Selecting previously unselected package libtirpc-common. Preparing to unpack .../10-libtirpc-common_1.3.4+ds-1.3_all.deb ... Unpacking libtirpc-common (1.3.4+ds-1.3) ... Selecting previously unselected package libtirpc3t64:amd64. Preparing to unpack .../11-libtirpc3t64_1.3.4+ds-1.3+b1_amd64.deb ... Adding 'diversion of /lib/x86_64-linux-gnu/libtirpc.so.3 to /lib/x86_64-linux-gnu/libtirpc.so.3.usr-is-merged by libtirpc3t64' Adding 'diversion of /lib/x86_64-linux-gnu/libtirpc.so.3.0.0 to /lib/x86_64-linux-gnu/libtirpc.so.3.0.0.usr-is-merged by libtirpc3t64' Unpacking libtirpc3t64:amd64 (1.3.4+ds-1.3+b1) ... Selecting previously unselected package libnsl2:amd64. Preparing to unpack .../12-libnsl2_1.3.0-3+b3_amd64.deb ... Unpacking libnsl2:amd64 (1.3.0-3+b3) ... Selecting previously unselected package readline-common. Preparing to unpack .../13-readline-common_8.2-5_all.deb ... Unpacking readline-common (8.2-5) ... Selecting previously unselected package libreadline8t64:amd64. Preparing to unpack .../14-libreadline8t64_8.2-5_amd64.deb ... Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8 to /lib/x86_64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8.2 to /lib/x86_64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8 to /lib/x86_64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8.2 to /lib/x86_64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:amd64 (8.2-5) ... Selecting previously unselected package libpython3.12-stdlib:amd64. Preparing to unpack .../15-libpython3.12-stdlib_3.12.8-1_amd64.deb ... Unpacking libpython3.12-stdlib:amd64 (3.12.8-1) ... Selecting previously unselected package python3.12. Preparing to unpack .../16-python3.12_3.12.8-1_amd64.deb ... Unpacking python3.12 (3.12.8-1) ... Selecting previously unselected package libpython3-stdlib:amd64. Preparing to unpack .../17-libpython3-stdlib_3.12.6-1_amd64.deb ... Unpacking libpython3-stdlib:amd64 (3.12.6-1) ... Setting up python3-minimal (3.12.6-1) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 21350 files and directories currently installed.) Preparing to unpack .../000-python3_3.12.6-1_amd64.deb ... Unpacking python3 (3.12.6-1) ... Selecting previously unselected package libpython3.13-minimal:amd64. Preparing to unpack .../001-libpython3.13-minimal_3.13.1-1_amd64.deb ... Unpacking libpython3.13-minimal:amd64 (3.13.1-1) ... Selecting previously unselected package python3.13-minimal. Preparing to unpack .../002-python3.13-minimal_3.13.1-1_amd64.deb ... Unpacking python3.13-minimal (3.13.1-1) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../003-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package openssl. Preparing to unpack .../004-openssl_3.3.2-2_amd64.deb ... Unpacking openssl (3.3.2-2) ... Selecting previously unselected package ca-certificates. Preparing to unpack .../005-ca-certificates_20240203_all.deb ... Unpacking ca-certificates (20240203) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../006-libmagic-mgc_1%3a5.45-3+b1_amd64.deb ... Unpacking libmagic-mgc (1:5.45-3+b1) ... Selecting previously unselected package libmagic1t64:amd64. Preparing to unpack .../007-libmagic1t64_1%3a5.45-3+b1_amd64.deb ... Unpacking libmagic1t64:amd64 (1:5.45-3+b1) ... Selecting previously unselected package file. Preparing to unpack .../008-file_1%3a5.45-3+b1_amd64.deb ... Unpacking file (1:5.45-3+b1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../009-gettext-base_0.22.5-2_amd64.deb ... Unpacking gettext-base (0.22.5-2) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../010-libuchardet0_0.0.8-1+b2_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.8-1+b2) ... Selecting previously unselected package groff-base. Preparing to unpack .../011-groff-base_1.23.0-5_amd64.deb ... Unpacking groff-base (1.23.0-5) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../012-bsdextrautils_2.40.2-12_amd64.deb ... Unpacking bsdextrautils (2.40.2-12) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../013-libpipeline1_1.5.8-1_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../014-man-db_2.13.0-1_amd64.deb ... Unpacking man-db (2.13.0-1) ... Selecting previously unselected package m4. Preparing to unpack .../015-m4_1.4.19-4_amd64.deb ... Unpacking m4 (1.4.19-4) ... Selecting previously unselected package autoconf. Preparing to unpack .../016-autoconf_2.72-3_all.deb ... Unpacking autoconf (2.72-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../017-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../018-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../019-autopoint_0.22.5-2_all.deb ... Unpacking autopoint (0.22.5-2) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../020-libdebhelper-perl_13.20_all.deb ... Unpacking libdebhelper-perl (13.20) ... Selecting previously unselected package libtool. Preparing to unpack .../021-libtool_2.4.7-8_all.deb ... Unpacking libtool (2.4.7-8) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../022-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../023-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../024-libfile-stripnondeterminism-perl_1.14.0-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.14.0-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../025-dh-strip-nondeterminism_1.14.0-1_all.deb ... Unpacking dh-strip-nondeterminism (1.14.0-1) ... Selecting previously unselected package libelf1t64:amd64. Preparing to unpack .../026-libelf1t64_0.192-4_amd64.deb ... Unpacking libelf1t64:amd64 (0.192-4) ... Selecting previously unselected package dwz. Preparing to unpack .../027-dwz_0.15-1+b1_amd64.deb ... Unpacking dwz (0.15-1+b1) ... Selecting previously unselected package libicu72:amd64. Preparing to unpack .../028-libicu72_72.1-5+b1_amd64.deb ... Unpacking libicu72:amd64 (72.1-5+b1) ... Selecting previously unselected package libxml2:amd64. Preparing to unpack .../029-libxml2_2.12.7+dfsg+really2.9.14-0.2+b1_amd64.deb ... Unpacking libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Selecting previously unselected package gettext. Preparing to unpack .../030-gettext_0.22.5-2_amd64.deb ... Unpacking gettext (0.22.5-2) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../031-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../032-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../033-debhelper_13.20_all.deb ... Unpacking debhelper (13.20) ... Selecting previously unselected package python3-autocommand. Preparing to unpack .../034-python3-autocommand_2.2.2-3_all.deb ... Unpacking python3-autocommand (2.2.2-3) ... Selecting previously unselected package python3-more-itertools. Preparing to unpack .../035-python3-more-itertools_10.5.0-1_all.deb ... Unpacking python3-more-itertools (10.5.0-1) ... Selecting previously unselected package python3-typing-extensions. Preparing to unpack .../036-python3-typing-extensions_4.12.2-2_all.deb ... Unpacking python3-typing-extensions (4.12.2-2) ... Selecting previously unselected package python3-typeguard. 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Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.24) ... Setting up libuchardet0:amd64 (0.0.8-1+b2) ... Setting up python3.13-minimal (3.13.1-1) ... Setting up netbase (6.4) ... Setting up libkrb5-3:amd64 (1.21.3-3) ... Setting up libssh2-1t64:amd64 (1.11.1-1) ... Setting up openssl (3.3.2-2) ... Setting up readline-common (8.2-5) ... Setting up libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Setting up libsz2:amd64 (1.1.3-1+b1) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up liblapack3:amd64 (3.12.0-4) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode Setting up gettext (0.22.5-2) ... Setting up libtool (2.4.7-8) ... Setting up libldap-2.5-0:amd64 (2.5.18+dfsg-3+b1) ... 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Setting up python3-jsonschema-specifications (2023.12.1-2) ... Setting up python3-hatch-vcs (0.4.0-1) ... Setting up dh-python (6.20241024) ... Setting up python3-scipy (1.13.1-6) ... Setting up pybuild-plugin-pyproject (6.20241024) ... Setting up python3-pandas-lib:amd64 (2.2.3+dfsg-5+b1) ... Setting up python3-h5py-serial (3.12.1-1) ... Setting up python3-pandas (2.2.3+dfsg-5) ... Setting up python3-jsonschema (4.19.2-5) ... Setting up python3-h5py (3.12.1-1) ... Setting up python3-hdmf (3.14.5-1) ... Processing triggers for libc-bin (2.40-4) ... Processing triggers for ca-certificates (20240203) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/pynwb-2.8.2/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../pynwb_2.8.2-2_source.changes dpkg-buildpackage: info: source package pynwb dpkg-buildpackage: info: source version 2.8.2-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Étienne Mollier dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean --buildsystem=pybuild dh_auto_clean -O--buildsystem=pybuild pybuild --clean -i python{version} -p 3.12 rm -rf .pybuild/ find . -name \*.pyc -exec rm {} \; dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/python3-pynwb.substvars debian/files rm -fr -- debian/python3-pynwb/ debian/tmp/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a \( -name autom4te.cache -o -name __pycache__ \) -prune -exec rm -rf {} + \) \) debian/rules binary dh binary --buildsystem=pybuild dh_update_autotools_config -O--buildsystem=pybuild dh_autoreconf -O--buildsystem=pybuild dh_auto_configure -O--buildsystem=pybuild pybuild --configure -i python{version} -p 3.12 dh_auto_build -O--buildsystem=pybuild pybuild --build -i python{version} -p 3.12 I: pybuild plugin_pyproject:129: Building wheel for python3.12 with "build" module I: pybuild base:311: python3.12 -m build --skip-dependency-check --no-isolation --wheel --outdir /build/reproducible-path/pynwb-2.8.2/.pybuild/cpython3_3.12_pynwb * Building wheel... Successfully built pynwb-2.8.2-py3-none-any.whl I: pybuild plugin_pyproject:144: Unpacking wheel built for python3.12 with "installer" module dh_auto_test -O--buildsystem=pybuild pybuild --test --test-pytest -i python{version} -p 3.12 I: pybuild base:311: cd /build/reproducible-path/pynwb-2.8.2/.pybuild/cpython3_3.12_pynwb/build; python3.12 -m pytest tests ============================= test session starts ============================== platform linux -- Python 3.12.8, pytest-8.3.3, pluggy-1.5.0 rootdir: /build/reproducible-path/pynwb-2.8.2/.pybuild/cpython3_3.12_pynwb/build configfile: pyproject.toml plugins: typeguard-4.4.1 collected 631 items tests/back_compat/test_import_structure.py . [ 0%] tests/back_compat/test_read.py ........ [ 1%] tests/integration/hdf5/test_base.py ...... [ 2%] tests/integration/hdf5/test_behavior.py .. [ 2%] tests/integration/hdf5/test_device.py .. [ 3%] tests/integration/hdf5/test_ecephys.py ................... [ 6%] tests/integration/hdf5/test_extension.py .. [ 6%] tests/integration/hdf5/test_file_copy.py . [ 6%] tests/integration/hdf5/test_icephys.py .................... [ 9%] tests/integration/hdf5/test_image.py .... [ 10%] tests/integration/hdf5/test_io.py ............................ [ 14%] tests/integration/hdf5/test_misc.py ............ [ 16%] tests/integration/hdf5/test_modular_storage.py ..ss [ 17%] tests/integration/hdf5/test_nwbfile.py ................................. [ 22%] ........... [ 24%] tests/integration/hdf5/test_ogen.py .... [ 24%] tests/integration/hdf5/test_ophys.py .................... [ 28%] tests/integration/hdf5/test_scratch.py ....... [ 29%] tests/integration/ros3/test_ros3.py ssss [ 29%] tests/integration/utils/test_io_utils.py ...... [ 30%] tests/unit/test_base.py ................................................ [ 38%] .................. [ 41%] tests/unit/test_behavior.py .......... [ 42%] tests/unit/test_config.py ss [ 43%] tests/unit/test_core.py ........... [ 44%] tests/unit/test_core_NWBContainer.py .. [ 45%] tests/unit/test_device.py . [ 45%] tests/unit/test_ecephys.py ........................ [ 49%] tests/unit/test_epoch.py ....... [ 50%] tests/unit/test_epoch_legacy.py ... [ 50%] tests/unit/test_extension.py ........ [ 51%] tests/unit/test_file.py ................................................ [ 59%] ..... [ 60%] tests/unit/test_icephys.py .......................... [ 64%] tests/unit/test_icephys_metadata_tables.py ............................. [ 69%] ................. [ 71%] tests/unit/test_image.py ........................... [ 76%] tests/unit/test_misc.py .................... [ 79%] tests/unit/test_mock.py ................................................ [ 86%] ................. [ 89%] tests/unit/test_ogen.py . [ 89%] tests/unit/test_ophys.py ...................... [ 93%] tests/unit/test_resources.py . [ 93%] tests/unit/test_retinotopy.py . [ 93%] tests/unit/test_scratch.py ............... [ 95%] tests/unit/test_spec.py ... [ 96%] tests/validation/test_validate.py ....................... [100%] =============================== warnings summary =============================== tests/integration/hdf5/test_base.py::TestImagesIO::test_roundtrip tests/integration/hdf5/test_base.py::TestImagesIO::test_roundtrip_export /usr/lib/python3/dist-packages/hdmf/build/objectmapper.py:871: IncorrectDatasetShapeBuildWarning: Shape of data does not match shape in spec 'ImageReferences' warnings.warn(msg, IncorrectDatasetShapeBuildWarning) -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html ============ 623 passed, 8 skipped, 2 warnings in 614.70s (0:10:14) ============ rm -fr -- /tmp/dh-xdg-rundir-iauy4zu8 create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=pybuild dh_prep -O--buildsystem=pybuild rm -f -- debian/python3-pynwb.substvars rm -fr -- debian/.debhelper/generated/python3-pynwb/ debian/python3-pynwb/ debian/tmp/ dh_auto_install --destdir=debian/python3-pynwb/ -O--buildsystem=pybuild install -m0755 -d /build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb pybuild --install -i python{version} -p 3.12 --dest-dir /build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb I: pybuild plugin_pyproject:178: Copying package built for python3.12 to destdir debian/rules execute_after_dh_install make[1]: Entering directory '/build/reproducible-path/pynwb-2.8.2' find debian -name "test_*.nwb" -delete rm -f .coverage.* # Remove duplicate directory. rm -rvf /build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3*/dist-packages/pynwb/nwb-schema/docs removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.12/dist-packages/pynwb/nwb-schema/docs/Readme.md' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.12/dist-packages/pynwb/nwb-schema/docs/storage/Makefile' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.12/dist-packages/pynwb/nwb-schema/docs/storage/source/conf.py' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.12/dist-packages/pynwb/nwb-schema/docs/storage/source/index.rst' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.12/dist-packages/pynwb/nwb-schema/docs/storage/source/_static/theme_overrides.css' removed directory '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.12/dist-packages/pynwb/nwb-schema/docs/storage/source/_static' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.12/dist-packages/pynwb/nwb-schema/docs/storage/source/storage_description.rst' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.12/dist-packages/pynwb/nwb-schema/docs/storage/source/credits.rst' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.12/dist-packages/pynwb/nwb-schema/docs/storage/source/storage_release_notes.rst' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.12/dist-packages/pynwb/nwb-schema/docs/storage/source/storage_hdf5.rst' removed directory '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.12/dist-packages/pynwb/nwb-schema/docs/storage/source' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.12/dist-packages/pynwb/nwb-schema/docs/storage/Readme.md' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.12/dist-packages/pynwb/nwb-schema/docs/storage/make.bat' removed directory '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.12/dist-packages/pynwb/nwb-schema/docs/storage' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.12/dist-packages/pynwb/nwb-schema/docs/format/Makefile' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.12/dist-packages/pynwb/nwb-schema/docs/format/source/conf.py' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.12/dist-packages/pynwb/nwb-schema/docs/format/source/format_release_notes.rst' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.12/dist-packages/pynwb/nwb-schema/docs/format/source/software_process.rst' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.12/dist-packages/pynwb/nwb-schema/docs/format/source/index.rst' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.12/dist-packages/pynwb/nwb-schema/docs/format/source/format_description.rst' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.12/dist-packages/pynwb/nwb-schema/docs/format/source/_static/theme_overrides.css' removed directory '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.12/dist-packages/pynwb/nwb-schema/docs/format/source/_static' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.12/dist-packages/pynwb/nwb-schema/docs/format/source/credits.rst' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.12/dist-packages/pynwb/nwb-schema/docs/format/source/figures/unit_times_refactor_nwb2_release_notesV2_Part2.png' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.12/dist-packages/pynwb/nwb-schema/docs/format/source/figures/unit_times_refactor_nwb2_release_notesV2_Part1.pdf' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.12/dist-packages/pynwb/nwb-schema/docs/format/source/figures/units_waveforms.png' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.12/dist-packages/pynwb/nwb-schema/docs/format/source/figures/units_electrodes.png' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.12/dist-packages/pynwb/nwb-schema/docs/format/source/figures/unit_times_refactor_nwb2_release_notesV2.pptx' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.12/dist-packages/pynwb/nwb-schema/docs/format/source/figures/units_spike_times.png' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.12/dist-packages/pynwb/nwb-schema/docs/format/source/figures/unit_times_refactor_nwb2_release_notes.png' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.12/dist-packages/pynwb/nwb-schema/docs/format/source/figures/unit_times_refactor_nwb2_release_notesV2_Part2.pdf' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.12/dist-packages/pynwb/nwb-schema/docs/format/source/figures/units_table.pptx' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.12/dist-packages/pynwb/nwb-schema/docs/format/source/figures/unit_times_refactor_nwb2_release_notesV2_Part1.png' removed directory '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.12/dist-packages/pynwb/nwb-schema/docs/format/source/figures' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.12/dist-packages/pynwb/nwb-schema/docs/format/source/conf_doc_autogen.py' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.12/dist-packages/pynwb/nwb-schema/docs/format/source/format.rst' removed directory '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.12/dist-packages/pynwb/nwb-schema/docs/format/source' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.12/dist-packages/pynwb/nwb-schema/docs/format/Readme.md' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.12/dist-packages/pynwb/nwb-schema/docs/format/make.bat' removed directory '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.12/dist-packages/pynwb/nwb-schema/docs/format' removed directory '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.12/dist-packages/pynwb/nwb-schema/docs' rm -vf /build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3*/dist-packages/pynwb/nwb-schema/Legal.txt removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.12/dist-packages/pynwb/nwb-schema/Legal.txt' rm -vf /build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3*/dist-packages/pynwb/nwb-schema/README.rst removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.12/dist-packages/pynwb/nwb-schema/README.rst' rm -vf /build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3*/dist-packages/pynwb/nwb-schema/license.txt removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.12/dist-packages/pynwb/nwb-schema/license.txt' rm -vf /build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3*/dist-packages/pynwb/nwb-schema/requirements-doc.txt removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.12/dist-packages/pynwb/nwb-schema/requirements-doc.txt' rm -rvf /build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3*/dist-packages/pynwb/nwb-schema/hdmf-common-schema/docs removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.12/dist-packages/pynwb/nwb-schema/hdmf-common-schema/docs/Makefile' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.12/dist-packages/pynwb/nwb-schema/hdmf-common-schema/docs/source/conf.py' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.12/dist-packages/pynwb/nwb-schema/hdmf-common-schema/docs/source/format_release_notes.rst' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.12/dist-packages/pynwb/nwb-schema/hdmf-common-schema/docs/source/software_process.rst' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.12/dist-packages/pynwb/nwb-schema/hdmf-common-schema/docs/source/hdmf_common_release_notes.rst' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.12/dist-packages/pynwb/nwb-schema/hdmf-common-schema/docs/source/index.rst' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.12/dist-packages/pynwb/nwb-schema/hdmf-common-schema/docs/source/format_description.rst' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.12/dist-packages/pynwb/nwb-schema/hdmf-common-schema/docs/source/_static/theme_overrides.css' removed directory '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.12/dist-packages/pynwb/nwb-schema/hdmf-common-schema/docs/source/_static' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.12/dist-packages/pynwb/nwb-schema/hdmf-common-schema/docs/source/credits.rst' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.12/dist-packages/pynwb/nwb-schema/hdmf-common-schema/docs/source/hdmf_experimental_release_notes.rst' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.12/dist-packages/pynwb/nwb-schema/hdmf-common-schema/docs/source/figures/ragged-array.png' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.12/dist-packages/pynwb/nwb-schema/hdmf-common-schema/docs/source/figures/ragged-array-goal.png' removed directory '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.12/dist-packages/pynwb/nwb-schema/hdmf-common-schema/docs/source/figures' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.12/dist-packages/pynwb/nwb-schema/hdmf-common-schema/docs/source/conf_doc_autogen.py' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.12/dist-packages/pynwb/nwb-schema/hdmf-common-schema/docs/source/format.rst' removed directory '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.12/dist-packages/pynwb/nwb-schema/hdmf-common-schema/docs/source' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.12/dist-packages/pynwb/nwb-schema/hdmf-common-schema/docs/Readme.md' removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.12/dist-packages/pynwb/nwb-schema/hdmf-common-schema/docs/make.bat' removed directory '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.12/dist-packages/pynwb/nwb-schema/hdmf-common-schema/docs' rm -vf /build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3*/dist-packages/pynwb/nwb-schema/hdmf-common-schema/Legal.txt removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.12/dist-packages/pynwb/nwb-schema/hdmf-common-schema/Legal.txt' rm -vf /build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3*/dist-packages/pynwb/nwb-schema/hdmf-common-schema/README.md removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.12/dist-packages/pynwb/nwb-schema/hdmf-common-schema/README.md' rm -vf /build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3*/dist-packages/pynwb/nwb-schema/hdmf-common-schema/license.txt removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.12/dist-packages/pynwb/nwb-schema/hdmf-common-schema/license.txt' rm -vf /build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3*/dist-packages/pynwb/nwb-schema/hdmf-common-schema/requirements-doc.txt removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.12/dist-packages/pynwb/nwb-schema/hdmf-common-schema/requirements-doc.txt' rm -vf /build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3*/dist-packages/pynwb/nwb-schema/hdmf-common-schema/setup.cfg removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/lib/python3.12/dist-packages/pynwb/nwb-schema/hdmf-common-schema/setup.cfg' make[1]: Leaving directory '/build/reproducible-path/pynwb-2.8.2' dh_installdocs -O--buildsystem=pybuild install -m0755 -d debian/python3-pynwb/usr/share/doc/python3-pynwb install -m0755 -d debian/python3-pynwb/usr/share/doc/python3-pynwb cd './src/pynwb/nwb-schema//..' && find 'nwb-schema' \( -type f -or -type l \) -and ! -empty -print0 | LC_ALL=C sort -z | xargs -0 -I {} cp --reflink=auto --parents -dp {} /build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/share/doc/python3-pynwb chmod -R u\+rw,go=rX debian/python3-pynwb/usr/share/doc install -p -m0644 debian/copyright debian/python3-pynwb/usr/share/doc/python3-pynwb/copyright debian/rules execute_after_dh_installdocs make[1]: Entering directory '/build/reproducible-path/pynwb-2.8.2' # Remove extra license files rm -vf /build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/share/doc/python3-pynwb/nwb-schema/hdmf-common-schema/license.txt removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/share/doc/python3-pynwb/nwb-schema/hdmf-common-schema/license.txt' rm -vf /build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/share/doc/python3-pynwb/nwb-schema/license.txt removed '/build/reproducible-path/pynwb-2.8.2/debian/python3-pynwb/usr/share/doc/python3-pynwb/nwb-schema/license.txt' make[1]: Leaving directory '/build/reproducible-path/pynwb-2.8.2' dh_installchangelogs -O--buildsystem=pybuild install -m0755 -d debian/python3-pynwb/usr/share/doc/python3-pynwb install -p -m0644 debian/.debhelper/generated/python3-pynwb/dh_installchangelogs.dch.trimmed debian/python3-pynwb/usr/share/doc/python3-pynwb/changelog.Debian install -p -m0644 ./CHANGELOG.md debian/python3-pynwb/usr/share/doc/python3-pynwb/changelog dh_python3 -O--buildsystem=pybuild D: dh_python3 dh_python3:180: version: 6.20241024 D: dh_python3 dh_python3:181: argv: ['/usr/bin/dh_python3', '-O--buildsystem=pybuild'] D: dh_python3 dh_python3:182: options: Namespace(guess_deps=True, skip_private=False, verbose=True, arch=None, package=None, no_package=None, remaining_packages=False, compile_all=False, vrange=None, regexpr=None, accept_upstream_versions=False, depends=None, depends_section=None, recommends=None, recommends_section=None, suggests=None, suggests_section=None, requires=None, shebang=None, ignore_shebangs=False, clean_dbg_pkg=True, no_ext_rename=False, no_shebang_rewrite=False, private_dir=None, O=['--buildsystem=pybuild']) D: dh_python3 dh_python3:183: supported Python versions: 3.12 (default=3.12) D: dh_python3 debhelper:174: source=pynwb, binary packages=['python3-pynwb'] D: dh_python3 dh_python3:205: processing package python3-pynwb... D: dh_python3 fs:50: moving files from debian/python3-pynwb/usr/lib/python3.12/dist-packages to debian/python3-pynwb/usr/lib/python3/dist-packages/ D: dh_python3 fs:249: removing dist-packages/.pytest_cache D: dh_python3 fs:254: removing dist-packages/.coverage.ionos1-amd64.1179055.XnAEsWWx D: dh_python3 fs:254: removing dist-packages/.coverage.ionos1-amd64.1179921.XqXvhkFx D: dh_python3 fs:254: removing dist-packages/.coverage.ionos1-amd64.1169759.XtYWuBex D: dh_python3 fs:254: removing dist-packages/.coverage.ionos1-amd64.1173941.XdXNIZXx D: dh_python3 fs:254: removing dist-packages/.coverage.ionos1-amd64.1176802.XQfZmaUx D: dh_python3 fs:254: removing dist-packages/.coverage.ionos1-amd64.1175420.XmWoKlDx D: dh_python3 fs:254: removing dist-packages/.coverage.ionos1-amd64.1168251.XgTMVpgx D: dh_python3 fs:254: removing dist-packages/.coverage.ionos1-amd64.1178189.XBvmkdkx D: dh_python3 fs:254: removing dist-packages/.coverage.ionos1-amd64.1168787.XWMxXGZx D: dh_python3 fs:254: removing dist-packages/.coverage.ionos1-amd64.1170966.XzroXTNx D: dh_python3 fs:254: removing dist-packages/.coverage.ionos1-amd64.1167117.XgRlIKXx D: dh_python3 fs:254: removing dist-packages/.coverage.ionos1-amd64.1171795.XnLfPMfx D: dh_python3 fs:179: Writing INSTALLER in debian/python3-pynwb/usr/lib/python3/dist-packages/pynwb-2.8.2.dist-info D: dh_python3 fs:190: Deleting RECORD in debian/python3-pynwb/usr/lib/python3/dist-packages/pynwb-2.8.2.dist-info D: dh_python3 fs:338: package python3-pynwb details = {'requires.txt': set(), 'egg-info': set(), 'dist-info': {'debian/python3-pynwb/usr/lib/python3/dist-packages/pynwb-2.8.2.dist-info/METADATA'}, 'nsp.txt': set(), 'shebangs': set(), 'public_vers': {Version('3')}, 'private_dirs': {}, 'compile': True, 'ext_vers': set(), 'ext_no_version': set()} D: dh_python3 depends:103: generating dependencies for package python3-pynwb D: dh_python3 pydist:175: trying to find dependency for h5py>=2.10 (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:255: dependency: constructed version D: dh_python3 pydist:175: trying to find dependency for hdmf>=3.14.3 (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:277: dependency: included in build-deps with limits D: dh_python3 pydist:175: trying to find dependency for numpy>=1.18 (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:284: dependency: included in build-deps D: dh_python3 pydist:175: trying to find dependency for pandas>=1.1.5 (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:284: dependency: included in build-deps D: dh_python3 pydist:175: trying to find dependency for python-dateutil>=2.7.3 (python=None) D: dh_python3 pydist:209: dependency: module seems to be installed D: dh_python3 pydist:284: dependency: included in build-deps D: dh_python3 depends:253: D={'python3-hdmf (>= 3.9.0~)', 'python3-dateutil', 'python3-numpy', 'python3-pandas', 'python3:any', 'python3-h5py (>= 2.10)'}; R=[]; S=[]; E=[], B=[]; RT=[] dh_installsystemduser -O--buildsystem=pybuild dh_perl -O--buildsystem=pybuild dh_link -O--buildsystem=pybuild dh_strip_nondeterminism -O--buildsystem=pybuild Using 1728585089 as canonical time Normalizing debian/python3-pynwb/usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/figures/unit_times_refactor_nwb2_release_notesV2_Part2.png using File::StripNondeterminism::handlers::png Normalizing debian/python3-pynwb/usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/figures/units_waveforms.png using File::StripNondeterminism::handlers::png Normalizing debian/python3-pynwb/usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/figures/units_electrodes.png using File::StripNondeterminism::handlers::png Normalizing debian/python3-pynwb/usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/figures/units_spike_times.png using File::StripNondeterminism::handlers::png Normalizing debian/python3-pynwb/usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/figures/unit_times_refactor_nwb2_release_notes.png using File::StripNondeterminism::handlers::png Normalizing debian/python3-pynwb/usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/figures/unit_times_refactor_nwb2_release_notesV2_Part1.png using File::StripNondeterminism::handlers::png Normalizing debian/python3-pynwb/usr/share/doc/python3-pynwb/nwb-schema/hdmf-common-schema/docs/source/figures/ragged-array-goal.png using File::StripNondeterminism::handlers::png Normalizing debian/python3-pynwb/usr/share/doc/python3-pynwb/nwb-schema/hdmf-common-schema/docs/source/figures/ragged-array.png using File::StripNondeterminism::handlers::png dh_compress -O--buildsystem=pybuild cd debian/python3-pynwb chmod a-x usr/share/doc/python3-pynwb/changelog usr/share/doc/python3-pynwb/changelog.Debian usr/share/doc/python3-pynwb/nwb-schema/README.rst usr/share/doc/python3-pynwb/nwb-schema/core/nwb.base.yaml usr/share/doc/python3-pynwb/nwb-schema/core/nwb.behavior.yaml usr/share/doc/python3-pynwb/nwb-schema/core/nwb.ecephys.yaml usr/share/doc/python3-pynwb/nwb-schema/core/nwb.file.yaml usr/share/doc/python3-pynwb/nwb-schema/core/nwb.icephys.yaml usr/share/doc/python3-pynwb/nwb-schema/core/nwb.image.yaml usr/share/doc/python3-pynwb/nwb-schema/core/nwb.misc.yaml usr/share/doc/python3-pynwb/nwb-schema/core/nwb.ophys.yaml usr/share/doc/python3-pynwb/nwb-schema/core/nwb.retinotopy.yaml usr/share/doc/python3-pynwb/nwb-schema/docs/format/Makefile usr/share/doc/python3-pynwb/nwb-schema/docs/format/Readme.md usr/share/doc/python3-pynwb/nwb-schema/docs/format/make.bat usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/conf.py usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/figures/unit_times_refactor_nwb2_release_notesV2.pptx usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/figures/unit_times_refactor_nwb2_release_notesV2_Part1.pdf usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/figures/unit_times_refactor_nwb2_release_notesV2_Part2.pdf usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/figures/units_table.pptx usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/format_description.rst usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/format_release_notes.rst usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/software_process.rst usr/share/doc/python3-pynwb/nwb-schema/docs/storage/Makefile usr/share/doc/python3-pynwb/nwb-schema/docs/storage/make.bat usr/share/doc/python3-pynwb/nwb-schema/docs/storage/source/conf.py usr/share/doc/python3-pynwb/nwb-schema/docs/storage/source/storage_hdf5.rst usr/share/doc/python3-pynwb/nwb-schema/hdmf-common-schema/common/table.yaml usr/share/doc/python3-pynwb/nwb-schema/hdmf-common-schema/docs/Makefile usr/share/doc/python3-pynwb/nwb-schema/hdmf-common-schema/docs/Readme.md usr/share/doc/python3-pynwb/nwb-schema/hdmf-common-schema/docs/make.bat usr/share/doc/python3-pynwb/nwb-schema/hdmf-common-schema/docs/source/conf.py usr/share/doc/python3-pynwb/nwb-schema/hdmf-common-schema/docs/source/hdmf_common_release_notes.rst usr/share/doc/python3-pynwb/nwb-schema/hdmf-common-schema/docs/source/software_process.rst usr/share/doc/python3-pynwb/nwb-schema/nwb.schema.json gzip -9nf usr/share/doc/python3-pynwb/changelog usr/share/doc/python3-pynwb/changelog.Debian usr/share/doc/python3-pynwb/nwb-schema/README.rst usr/share/doc/python3-pynwb/nwb-schema/core/nwb.base.yaml usr/share/doc/python3-pynwb/nwb-schema/core/nwb.behavior.yaml usr/share/doc/python3-pynwb/nwb-schema/core/nwb.ecephys.yaml usr/share/doc/python3-pynwb/nwb-schema/core/nwb.file.yaml usr/share/doc/python3-pynwb/nwb-schema/core/nwb.icephys.yaml usr/share/doc/python3-pynwb/nwb-schema/core/nwb.image.yaml usr/share/doc/python3-pynwb/nwb-schema/core/nwb.misc.yaml usr/share/doc/python3-pynwb/nwb-schema/core/nwb.ophys.yaml usr/share/doc/python3-pynwb/nwb-schema/core/nwb.retinotopy.yaml usr/share/doc/python3-pynwb/nwb-schema/docs/format/Makefile usr/share/doc/python3-pynwb/nwb-schema/docs/format/Readme.md usr/share/doc/python3-pynwb/nwb-schema/docs/format/make.bat usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/conf.py usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/figures/unit_times_refactor_nwb2_release_notesV2.pptx usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/figures/unit_times_refactor_nwb2_release_notesV2_Part1.pdf usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/figures/unit_times_refactor_nwb2_release_notesV2_Part2.pdf usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/figures/units_table.pptx usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/format_description.rst usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/format_release_notes.rst usr/share/doc/python3-pynwb/nwb-schema/docs/format/source/software_process.rst usr/share/doc/python3-pynwb/nwb-schema/docs/storage/Makefile usr/share/doc/python3-pynwb/nwb-schema/docs/storage/make.bat usr/share/doc/python3-pynwb/nwb-schema/docs/storage/source/conf.py usr/share/doc/python3-pynwb/nwb-schema/docs/storage/source/storage_hdf5.rst usr/share/doc/python3-pynwb/nwb-schema/hdmf-common-schema/common/table.yaml usr/share/doc/python3-pynwb/nwb-schema/hdmf-common-schema/docs/Makefile usr/share/doc/python3-pynwb/nwb-schema/hdmf-common-schema/docs/Readme.md usr/share/doc/python3-pynwb/nwb-schema/hdmf-common-schema/docs/make.bat usr/share/doc/python3-pynwb/nwb-schema/hdmf-common-schema/docs/source/conf.py usr/share/doc/python3-pynwb/nwb-schema/hdmf-common-schema/docs/source/hdmf_common_release_notes.rst usr/share/doc/python3-pynwb/nwb-schema/hdmf-common-schema/docs/source/software_process.rst usr/share/doc/python3-pynwb/nwb-schema/nwb.schema.json cd '/build/reproducible-path/pynwb-2.8.2' dh_fixperms -O--buildsystem=pybuild find debian/python3-pynwb ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/python3-pynwb/usr/share/doc -type f -a -true -a ! -regex 'debian/python3-pynwb/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python3-pynwb/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/python3-pynwb -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/python3-pynwb/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w dh_missing -O--buildsystem=pybuild dh_installdeb -O--buildsystem=pybuild install -m0755 -d debian/python3-pynwb/DEBIAN printf '#!/bin/sh\nset -e\n' > debian/python3-pynwb/DEBIAN/postinst cat debian/python3-pynwb.postinst.debhelper >> debian/python3-pynwb/DEBIAN/postinst chmod 0755 -- debian/python3-pynwb/DEBIAN/postinst printf '#!/bin/sh\nset -e\n' > debian/python3-pynwb/DEBIAN/prerm cat debian/python3-pynwb.prerm.debhelper >> debian/python3-pynwb/DEBIAN/prerm chmod 0755 -- debian/python3-pynwb/DEBIAN/prerm dh_gencontrol -O--buildsystem=pybuild install -m0755 -d debian/python3-pynwb/DEBIAN echo misc:Depends= >> debian/python3-pynwb.substvars echo misc:Pre-Depends= >> debian/python3-pynwb.substvars dpkg-gencontrol -ppython3-pynwb -ldebian/changelog -Tdebian/python3-pynwb.substvars -cdebian/control -Pdebian/python3-pynwb chmod 0644 -- debian/python3-pynwb/DEBIAN/control dh_md5sums -O--buildsystem=pybuild install -m0755 -d debian/python3-pynwb/DEBIAN cd debian/python3-pynwb >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/python3-pynwb/DEBIAN/md5sums dh_builddeb -O--buildsystem=pybuild dpkg-deb --root-owner-group --build debian/python3-pynwb .. dpkg-deb: building package 'python3-pynwb' in '../python3-pynwb_2.8.2-2_all.deb'. dpkg-genbuildinfo --build=binary -O../pynwb_2.8.2-2_amd64.buildinfo dpkg-genchanges --build=binary -O../pynwb_2.8.2-2_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/1015095 and its subdirectories I: Current time: Mon Dec 9 08:20:23 -12 2024 I: pbuilder-time-stamp: 1733775623 Mon Dec 9 20:20:24 UTC 2024 I: 1st build successful. Starting 2nd build on remote node ionos15-amd64.debian.net. Mon Dec 9 20:20:24 UTC 2024 I: Preparing to do remote build '2' on ionos15-amd64.debian.net. Mon Dec 9 20:27:26 UTC 2024 I: Deleting $TMPDIR on ionos15-amd64.debian.net. Mon Dec 9 20:27:27 UTC 2024 I: pynwb_2.8.2-2_amd64.changes: Format: 1.8 Date: Thu, 10 Oct 2024 20:31:29 +0200 Source: pynwb Binary: python3-pynwb Architecture: all Version: 2.8.2-2 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Étienne Mollier Description: python3-pynwb - Python library for working with Neurodata in the NWB format Closes: 1084039 Changes: pynwb (2.8.2-2) unstable; urgency=medium . * d/control: build depends on python3-hatch-vcs. (Closes: #1084039) * d/s/lintian-overrides: deleted: false positive fixed in lintian. Checksums-Sha1: 9c99e4d8aaa8889b698f452f8b34bfd84e771d37 8166 pynwb_2.8.2-2_amd64.buildinfo fd0811f39d0380a435064e5586bcb0d887c69966 1356348 python3-pynwb_2.8.2-2_all.deb Checksums-Sha256: c4b1c4495f67ed853990126dd35cc356c890408af4600d609774ee9e05677fac 8166 pynwb_2.8.2-2_amd64.buildinfo 5785ee27c1ee114db04399ff90ddf3b51ca48eb56239f11fc8d8b87eef65c22c 1356348 python3-pynwb_2.8.2-2_all.deb Files: a8b9b504fd4ebaf2b0724d6678fbccee 8166 python optional pynwb_2.8.2-2_amd64.buildinfo 1415d04e1cf588a11b4be732d8979b2f 1356348 python optional python3-pynwb_2.8.2-2_all.deb Mon Dec 9 20:27:28 UTC 2024 I: diffoscope 284 will be used to compare the two builds: Running as unit: rb-diffoscope-amd64_29-27876.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.k5i5oyPN/pynwb_2.8.2-2.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.k5i5oyPN/pynwb_2.8.2-2.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.k5i5oyPN/pynwb_2.8.2-2.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.k5i5oyPN/b1/pynwb_2.8.2-2_amd64.changes /srv/reproducible-results/rbuild-debian/r-b-build.k5i5oyPN/b2/pynwb_2.8.2-2_amd64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.344s) 0.344s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.025s) 0.025s 12 calls diffoscope.comparators.binary.FilesystemFile ## specialize (total time: 0.000s) 0.000s 1 call specialize Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 650ms CPU time consumed: 650ms Mon Dec 9 20:27:29 UTC 2024 I: diffoscope 284 found no differences in the changes files, and a .buildinfo file also exists. Mon Dec 9 20:27:29 UTC 2024 I: pynwb from trixie built successfully and reproducibly on amd64. Mon Dec 9 20:27:30 UTC 2024 I: Submitting .buildinfo files to external archives: Mon Dec 9 20:27:30 UTC 2024 I: Submitting 12K b1/pynwb_2.8.2-2_amd64.buildinfo.asc Mon Dec 9 20:27:31 UTC 2024 I: Submitting 12K b2/pynwb_2.8.2-2_amd64.buildinfo.asc Mon Dec 9 20:27:32 UTC 2024 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Mon Dec 9 20:27:32 UTC 2024 I: Done submitting .buildinfo files. Mon Dec 9 20:27:32 UTC 2024 I: Removing signed pynwb_2.8.2-2_amd64.buildinfo.asc files: removed './b1/pynwb_2.8.2-2_amd64.buildinfo.asc' removed './b2/pynwb_2.8.2-2_amd64.buildinfo.asc'