Sat Jun 22 17:09:05 UTC 2024 I: starting to build pullseq/trixie/amd64 on jenkins on '2024-06-22 17:08' Sat Jun 22 17:09:05 UTC 2024 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/amd64_35/16925/console.log Sat Jun 22 17:09:05 UTC 2024 I: Downloading source for trixie/pullseq=1.0.2-5 --2024-06-22 17:09:06-- http://deb.debian.org/debian/pool/main/p/pullseq/pullseq_1.0.2-5.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 1348 (1.3K) [text/prs.lines.tag] Saving to: ‘pullseq_1.0.2-5.dsc’ 0K . 100% 109M=0s 2024-06-22 17:09:06 (109 MB/s) - ‘pullseq_1.0.2-5.dsc’ saved [1348/1348] Sat Jun 22 17:09:07 UTC 2024 I: pullseq_1.0.2-5.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: pullseq Binary: pullseq Architecture: any Version: 1.0.2-5 Maintainer: Debian Med Packaging Team Uploaders: Nilesh Patra Homepage: https://github.com/bcthomas/pullseq Standards-Version: 4.6.0 Vcs-Browser: https://salsa.debian.org/med-team/pullseq Vcs-Git: https://salsa.debian.org/med-team/pullseq.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13), libpcre2-dev, zlib1g-dev Package-List: pullseq deb science optional arch=any Checksums-Sha1: fcfc4b994c29cb5b504c8e7503eba12d569d454e 1408480 pullseq_1.0.2.orig.tar.gz 8b9ef948f1b3e124eba973e83104c1d194beece7 8904 pullseq_1.0.2-5.debian.tar.xz Checksums-Sha256: a295d7e0e2d64ed05d293d795d1716376707e465f2c42ede6454f27db586c85f 1408480 pullseq_1.0.2.orig.tar.gz dafe4c70393b358df0c2ce5eb0f79eda52344ca860a5ca6f8dcf8570e11deaca 8904 pullseq_1.0.2-5.debian.tar.xz Files: a4ef6e5b4b5c77be2ef5d444c44fb6c0 1408480 pullseq_1.0.2.orig.tar.gz a3c2152af3d00472ac5042ee0e5368eb 8904 pullseq_1.0.2-5.debian.tar.xz -----BEGIN PGP SIGNATURE----- iHUEARYIAB0WIQSglbZu4JAkvuai8HIqJ5BL1yQ+2gUCZfNqCAAKCRAqJ5BL1yQ+ 2uDUAP9p6beVcqjYofyUgsCmVPr6U/yqhV9lvusLRGcCOYBfVQD9FrC468ldqD/B iQJlLfPdrc2K87/jY3zUcB9f5joSLQU= =Xvzr -----END PGP SIGNATURE----- Sat Jun 22 17:09:07 UTC 2024 I: Checking whether the package is not for us Sat Jun 22 17:09:07 UTC 2024 I: Starting 1st build on remote node infom01-amd64.debian.net. Sat Jun 22 17:09:07 UTC 2024 I: Preparing to do remote build '1' on infom01-amd64.debian.net. Sat Jun 22 17:10:05 UTC 2024 I: Deleting $TMPDIR on infom01-amd64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Sat Jun 22 05:09:09 -12 2024 I: pbuilder-time-stamp: 1719076149 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [pullseq_1.0.2-5.dsc] I: copying [./pullseq_1.0.2.orig.tar.gz] I: copying [./pullseq_1.0.2-5.debian.tar.xz] I: Extracting source gpgv: Signature made Thu Mar 14 21:20:08 2024 gpgv: using EDDSA key A095B66EE09024BEE6A2F0722A27904BD7243EDA gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./pullseq_1.0.2-5.dsc: no acceptable signature found dpkg-source: info: extracting pullseq in pullseq-1.0.2 dpkg-source: info: unpacking pullseq_1.0.2.orig.tar.gz dpkg-source: info: unpacking pullseq_1.0.2-5.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying pcre2.patch dpkg-source: info: applying getc.patch dpkg-source: info: applying fixup-implicit-function-declaration.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/3652391/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='amd64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' DISTRIBUTION='trixie' HOME='/root' HOST_ARCH='amd64' IFS=' ' INVOCATION_ID='6031a9d6f9cf4f8a82a5f1860032bc22' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='3652391' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.kYB7silD/pbuilderrc_wKCg --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.kYB7silD/b1 --logfile b1/build.log pullseq_1.0.2-5.dsc' SUDO_GID='109' SUDO_UID='104' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' I: uname -a Linux infom01-amd64 6.1.0-21-cloud-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.90-1 (2024-05-03) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Jun 5 22:35 /bin -> usr/bin I: user script /srv/workspace/pbuilder/3652391/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), libpcre2-dev, zlib1g-dev dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19692 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on libpcre2-dev; however: Package libpcre2-dev is not installed. pbuilder-satisfydepends-dummy depends on zlib1g-dev; however: Package zlib1g-dev is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libdebhelper-perl{a} libelf1t64{a} libfile-stripnondeterminism-perl{a} libicu72{a} libmagic-mgc{a} libmagic1t64{a} libpcre2-16-0{a} libpcre2-32-0{a} libpcre2-dev{a} libpcre2-posix3{a} libpipeline1{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 34 newly installed, 0 to remove and 0 not upgraded. Need to get 21.3 MB of archives. After unpacking 78.9 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main amd64 sensible-utils all 0.0.23 [24.7 kB] Get: 2 http://deb.debian.org/debian trixie/main amd64 libmagic-mgc amd64 1:5.45-3 [314 kB] Get: 3 http://deb.debian.org/debian trixie/main amd64 libmagic1t64 amd64 1:5.45-3 [105 kB] Get: 4 http://deb.debian.org/debian trixie/main amd64 file amd64 1:5.45-3 [42.9 kB] Get: 5 http://deb.debian.org/debian trixie/main amd64 gettext-base amd64 0.21-14+b1 [161 kB] Get: 6 http://deb.debian.org/debian trixie/main amd64 libuchardet0 amd64 0.0.8-1+b1 [68.8 kB] Get: 7 http://deb.debian.org/debian trixie/main amd64 groff-base amd64 1.23.0-4 [1180 kB] Get: 8 http://deb.debian.org/debian trixie/main amd64 bsdextrautils amd64 2.40.1-8.1 [96.2 kB] Get: 9 http://deb.debian.org/debian trixie/main amd64 libpipeline1 amd64 1.5.7-2 [38.0 kB] Get: 10 http://deb.debian.org/debian trixie/main amd64 man-db amd64 2.12.1-2 [1411 kB] Get: 11 http://deb.debian.org/debian trixie/main amd64 m4 amd64 1.4.19-4 [287 kB] Get: 12 http://deb.debian.org/debian trixie/main amd64 autoconf all 2.71-3 [332 kB] Get: 13 http://deb.debian.org/debian trixie/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get: 14 http://deb.debian.org/debian trixie/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get: 15 http://deb.debian.org/debian trixie/main amd64 autopoint all 0.21-14 [496 kB] Get: 16 http://deb.debian.org/debian trixie/main amd64 libdebhelper-perl all 13.15.3 [88.0 kB] Get: 17 http://deb.debian.org/debian trixie/main amd64 libtool all 2.4.7-7 [517 kB] Get: 18 http://deb.debian.org/debian trixie/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 19 http://deb.debian.org/debian trixie/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 20 http://deb.debian.org/debian trixie/main amd64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 21 http://deb.debian.org/debian trixie/main amd64 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 22 http://deb.debian.org/debian trixie/main amd64 libelf1t64 amd64 0.191-1+b1 [189 kB] Get: 23 http://deb.debian.org/debian trixie/main amd64 dwz amd64 0.15-1+b1 [110 kB] Get: 24 http://deb.debian.org/debian trixie/main amd64 libicu72 amd64 72.1-4+b1 [9395 kB] Get: 25 http://deb.debian.org/debian trixie/main amd64 libxml2 amd64 2.9.14+dfsg-1.3+b3 [692 kB] Get: 26 http://deb.debian.org/debian trixie/main amd64 gettext amd64 0.21-14+b1 [1301 kB] Get: 27 http://deb.debian.org/debian trixie/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 28 http://deb.debian.org/debian trixie/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 29 http://deb.debian.org/debian trixie/main amd64 debhelper all 13.15.3 [901 kB] Get: 30 http://deb.debian.org/debian trixie/main amd64 libpcre2-16-0 amd64 10.42-4+b1 [246 kB] Get: 31 http://deb.debian.org/debian trixie/main amd64 libpcre2-32-0 amd64 10.42-4+b1 [234 kB] Get: 32 http://deb.debian.org/debian trixie/main amd64 libpcre2-posix3 amd64 10.42-4+b1 [55.8 kB] Get: 33 http://deb.debian.org/debian trixie/main amd64 libpcre2-dev amd64 10.42-4+b1 [755 kB] Get: 34 http://deb.debian.org/debian trixie/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1 [919 kB] Fetched 21.3 MB in 2s (12.1 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19692 files and directories currently installed.) Preparing to unpack .../00-sensible-utils_0.0.23_all.deb ... Unpacking sensible-utils (0.0.23) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../01-libmagic-mgc_1%3a5.45-3_amd64.deb ... Unpacking libmagic-mgc (1:5.45-3) ... Selecting previously unselected package libmagic1t64:amd64. Preparing to unpack .../02-libmagic1t64_1%3a5.45-3_amd64.deb ... Unpacking libmagic1t64:amd64 (1:5.45-3) ... Selecting previously unselected package file. Preparing to unpack .../03-file_1%3a5.45-3_amd64.deb ... Unpacking file (1:5.45-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../04-gettext-base_0.21-14+b1_amd64.deb ... Unpacking gettext-base (0.21-14+b1) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../05-libuchardet0_0.0.8-1+b1_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.8-1+b1) ... Selecting previously unselected package groff-base. Preparing to unpack .../06-groff-base_1.23.0-4_amd64.deb ... Unpacking groff-base (1.23.0-4) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../07-bsdextrautils_2.40.1-8.1_amd64.deb ... Unpacking bsdextrautils (2.40.1-8.1) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../08-libpipeline1_1.5.7-2_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.7-2) ... Selecting previously unselected package man-db. Preparing to unpack .../09-man-db_2.12.1-2_amd64.deb ... Unpacking man-db (2.12.1-2) ... Selecting previously unselected package m4. Preparing to unpack .../10-m4_1.4.19-4_amd64.deb ... Unpacking m4 (1.4.19-4) ... Selecting previously unselected package autoconf. Preparing to unpack .../11-autoconf_2.71-3_all.deb ... Unpacking autoconf (2.71-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../12-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../13-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../14-autopoint_0.21-14_all.deb ... Unpacking autopoint (0.21-14) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../15-libdebhelper-perl_13.15.3_all.deb ... Unpacking libdebhelper-perl (13.15.3) ... Selecting previously unselected package libtool. Preparing to unpack .../16-libtool_2.4.7-7_all.deb ... Unpacking libtool (2.4.7-7) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../17-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../18-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../19-libfile-stripnondeterminism-perl_1.14.0-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.14.0-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../20-dh-strip-nondeterminism_1.14.0-1_all.deb ... Unpacking dh-strip-nondeterminism (1.14.0-1) ... Selecting previously unselected package libelf1t64:amd64. Preparing to unpack .../21-libelf1t64_0.191-1+b1_amd64.deb ... Unpacking libelf1t64:amd64 (0.191-1+b1) ... Selecting previously unselected package dwz. Preparing to unpack .../22-dwz_0.15-1+b1_amd64.deb ... Unpacking dwz (0.15-1+b1) ... Selecting previously unselected package libicu72:amd64. Preparing to unpack .../23-libicu72_72.1-4+b1_amd64.deb ... Unpacking libicu72:amd64 (72.1-4+b1) ... Selecting previously unselected package libxml2:amd64. Preparing to unpack .../24-libxml2_2.9.14+dfsg-1.3+b3_amd64.deb ... Unpacking libxml2:amd64 (2.9.14+dfsg-1.3+b3) ... Selecting previously unselected package gettext. Preparing to unpack .../25-gettext_0.21-14+b1_amd64.deb ... Unpacking gettext (0.21-14+b1) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../26-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../27-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../28-debhelper_13.15.3_all.deb ... Unpacking debhelper (13.15.3) ... Selecting previously unselected package libpcre2-16-0:amd64. Preparing to unpack .../29-libpcre2-16-0_10.42-4+b1_amd64.deb ... Unpacking libpcre2-16-0:amd64 (10.42-4+b1) ... Selecting previously unselected package libpcre2-32-0:amd64. Preparing to unpack .../30-libpcre2-32-0_10.42-4+b1_amd64.deb ... Unpacking libpcre2-32-0:amd64 (10.42-4+b1) ... Selecting previously unselected package libpcre2-posix3:amd64. Preparing to unpack .../31-libpcre2-posix3_10.42-4+b1_amd64.deb ... Unpacking libpcre2-posix3:amd64 (10.42-4+b1) ... Selecting previously unselected package libpcre2-dev:amd64. Preparing to unpack .../32-libpcre2-dev_10.42-4+b1_amd64.deb ... Unpacking libpcre2-dev:amd64 (10.42-4+b1) ... Selecting previously unselected package zlib1g-dev:amd64. Preparing to unpack .../33-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1_amd64.deb ... Unpacking zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1) ... Setting up libpipeline1:amd64 (1.5.7-2) ... Setting up libicu72:amd64 (72.1-4+b1) ... Setting up bsdextrautils (2.40.1-8.1) ... Setting up libmagic-mgc (1:5.45-3) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.15.3) ... Setting up libmagic1t64:amd64 (1:5.45-3) ... Setting up gettext-base (0.21-14+b1) ... Setting up m4 (1.4.19-4) ... Setting up file (1:5.45-3) ... Setting up libpcre2-16-0:amd64 (10.42-4+b1) ... Setting up libelf1t64:amd64 (0.191-1+b1) ... Setting up autotools-dev (20220109.1) ... Setting up libpcre2-32-0:amd64 (10.42-4+b1) ... Setting up autopoint (0.21-14) ... Setting up autoconf (2.71-3) ... Setting up zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1) ... Setting up libpcre2-posix3:amd64 (10.42-4+b1) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.23) ... Setting up libuchardet0:amd64 (0.0.8-1+b1) ... Setting up libxml2:amd64 (2.9.14+dfsg-1.3+b3) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up gettext (0.21-14+b1) ... Setting up libpcre2-dev:amd64 (10.42-4+b1) ... Setting up libtool (2.4.7-7) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up groff-base (1.23.0-4) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.12.1-2) ... Not building database; man-db/auto-update is not 'true'. Setting up debhelper (13.15.3) ... Processing triggers for libc-bin (2.38-13) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/pullseq-1.0.2/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../pullseq_1.0.2-5_source.changes dpkg-buildpackage: info: source package pullseq dpkg-buildpackage: info: source version 1.0.2-5 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Nilesh Patra dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf configure.ac:12: installing './compile' configure.ac:48: installing './config.guess' configure.ac:48: installing './config.sub' configure.ac:7: installing './install-sh' configure.ac:7: installing './missing' src/Makefile.am: installing './depcomp' dh_auto_configure ./configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/x86_64-linux-gnu --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a race-free mkdir -p... /usr/bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether gcc accepts -g... yes checking for gcc option to enable C11 features... none needed checking whether gcc understands -c and -o together... yes checking whether make supports the include directive... yes (GNU style) checking dependency style of gcc... none checking for gzopen in -lz... yes checking for pcre2_config_8 in -lpcre2-8... yes checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for pcre2.h... no checking for inttypes.h... (cached) yes checking for limits.h... yes checking for stddef.h... yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for inline... inline checking for size_t... yes checking for ssize_t... yes checking for uint16_t... yes checking for uint32_t... yes checking for uint8_t... yes checking for ptrdiff_t... yes checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking for GNU libc compatible malloc... yes checking for GNU libc compatible realloc... yes checking for strlen... yes checking for memset... yes checking for strchr... yes checking for strerror... yes checking for strtol... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating src/Makefile config.status: creating src/config.h config.status: executing depfiles commands dh_auto_build make -j12 make[1]: Entering directory '/build/reproducible-path/pullseq-1.0.2' Making all in src make[2]: Entering directory '/build/reproducible-path/pullseq-1.0.2/src' make all-am make[3]: Entering directory '/build/reproducible-path/pullseq-1.0.2/src' gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pullseq-1.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fcommon -c -o hash.o hash.c gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pullseq-1.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fcommon -c -o output.o output.c gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pullseq-1.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fcommon -c -o size_filter.o size_filter.c gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pullseq-1.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fcommon -c -o search_header.o search_header.c gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pullseq-1.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fcommon -c -o file_read.o file_read.c gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pullseq-1.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fcommon -c -o pull_by_re.o pull_by_re.c gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pullseq-1.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fcommon -c -o pull_by_name.o pull_by_name.c gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pullseq-1.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fcommon -c -o pull_by_size.o pull_by_size.c gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pullseq-1.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fcommon -c -o pullseq.o pullseq.c gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pullseq-1.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fcommon -c -o cmpseq.o cmpseq.c gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pullseq-1.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fcommon -c -o seqdiff.o seqdiff.c gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pullseq-1.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fcommon -c -o seqdiff_results.o seqdiff_results.c gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pullseq-1.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fcommon -Wl,-z,relro -Wl,-z,now -lpcre2-8 -o pullseq hash.o output.o size_filter.o search_header.o file_read.o pull_by_re.o pull_by_name.o pull_by_size.o pullseq.o -lpcre2-8 -lz gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/pullseq-1.0.2=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -fcommon -Wl,-z,relro -Wl,-z,now -lpcre2-8 -o seqdiff cmpseq.o file_read.o hash.o seqdiff.o seqdiff_results.o output.o -lpcre2-8 -lz make[3]: Leaving directory '/build/reproducible-path/pullseq-1.0.2/src' make[2]: Leaving directory '/build/reproducible-path/pullseq-1.0.2/src' make[2]: Entering directory '/build/reproducible-path/pullseq-1.0.2' make[2]: Nothing to be done for 'all-am'. make[2]: Leaving directory '/build/reproducible-path/pullseq-1.0.2' make[1]: Leaving directory '/build/reproducible-path/pullseq-1.0.2' dh_auto_test make -j12 check "TESTSUITEFLAGS=-j12 --verbose" VERBOSE=1 make[1]: Entering directory '/build/reproducible-path/pullseq-1.0.2' Making check in src make[2]: Entering directory '/build/reproducible-path/pullseq-1.0.2/src' make[2]: Leaving directory '/build/reproducible-path/pullseq-1.0.2/src' make[2]: Entering directory '/build/reproducible-path/pullseq-1.0.2' make[2]: Nothing to be done for 'check-am'. make[2]: Leaving directory '/build/reproducible-path/pullseq-1.0.2' make[1]: Leaving directory '/build/reproducible-path/pullseq-1.0.2' create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install --destdir=debian/pullseq/ make -j12 install DESTDIR=/build/reproducible-path/pullseq-1.0.2/debian/pullseq AM_UPDATE_INFO_DIR=no make[1]: Entering directory '/build/reproducible-path/pullseq-1.0.2' Making install in src make[2]: Entering directory '/build/reproducible-path/pullseq-1.0.2/src' make[3]: Entering directory '/build/reproducible-path/pullseq-1.0.2/src' make[3]: Nothing to be done for 'install-data-am'. /usr/bin/mkdir -p '/build/reproducible-path/pullseq-1.0.2/debian/pullseq/usr/bin' /usr/bin/install -c pullseq seqdiff '/build/reproducible-path/pullseq-1.0.2/debian/pullseq/usr/bin' make[3]: Leaving directory '/build/reproducible-path/pullseq-1.0.2/src' make[2]: Leaving directory '/build/reproducible-path/pullseq-1.0.2/src' make[2]: Entering directory '/build/reproducible-path/pullseq-1.0.2' make[3]: Entering directory '/build/reproducible-path/pullseq-1.0.2' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/build/reproducible-path/pullseq-1.0.2' make[2]: Leaving directory '/build/reproducible-path/pullseq-1.0.2' make[1]: Leaving directory '/build/reproducible-path/pullseq-1.0.2' dh_installdocs dh_installchangelogs dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'pullseq-dbgsym' in '../pullseq-dbgsym_1.0.2-5_amd64.deb'. dpkg-deb: building package 'pullseq' in '../pullseq_1.0.2-5_amd64.deb'. dpkg-genbuildinfo --build=binary -O../pullseq_1.0.2-5_amd64.buildinfo dpkg-genchanges --build=binary -O../pullseq_1.0.2-5_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/3652391 and its subdirectories I: Current time: Sat Jun 22 05:10:04 -12 2024 I: pbuilder-time-stamp: 1719076204 Sat Jun 22 17:10:06 UTC 2024 I: 1st build successful. Starting 2nd build on remote node infom02-amd64.debian.net. Sat Jun 22 17:10:06 UTC 2024 I: Preparing to do remote build '2' on infom02-amd64.debian.net. Sat Jun 22 17:10:55 UTC 2024 I: Deleting $TMPDIR on infom02-amd64.debian.net. Sat Jun 22 17:10:56 UTC 2024 I: pullseq_1.0.2-5_amd64.changes: Format: 1.8 Date: Fri, 15 Mar 2024 02:45:24 +0530 Source: pullseq Binary: pullseq pullseq-dbgsym Architecture: amd64 Version: 1.0.2-5 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Nilesh Patra Description: pullseq - Extract sequence from a fasta or fastq Closes: 1066472 Changes: pullseq (1.0.2-5) unstable; urgency=medium . * Fixup implicit declaration of function (Closes: #1066472) Checksums-Sha1: fe6bc9c382a5edc9fcd0d0223cd417269d7051c7 51724 pullseq-dbgsym_1.0.2-5_amd64.deb 43715b95c4ca17b0018507e613f36f4d259c7dbb 5238 pullseq_1.0.2-5_amd64.buildinfo 2d6271ab4b9ae1e8b6fdadebd093585ad8bc0e57 22052 pullseq_1.0.2-5_amd64.deb Checksums-Sha256: cc9fab5a77baf6c66eb7f41b8b1215bcb209e667dfc461154a8404fe1a29e7ab 51724 pullseq-dbgsym_1.0.2-5_amd64.deb abff2446d7babb4ee5d8ffe5d775f329892f974a8c1f963b65971d1b4d497061 5238 pullseq_1.0.2-5_amd64.buildinfo 69635ecffadbf92c7e8ce563d92dfe10c6f8ff7d5a0b9b707ca77b143b80268c 22052 pullseq_1.0.2-5_amd64.deb Files: 19b9707d41bc699bb4f2193809785db2 51724 debug optional pullseq-dbgsym_1.0.2-5_amd64.deb b380e3fbc8e0e7bef249cc32cf41f2bb 5238 science optional pullseq_1.0.2-5_amd64.buildinfo 4e5ab590b64d8b91e640d2944aa2c295 22052 science optional pullseq_1.0.2-5_amd64.deb Sat Jun 22 17:10:58 UTC 2024 I: diffoscope 271 will be used to compare the two builds: Running as unit: rb-diffoscope-amd64_35-16925.service Warning: program compiled against libxml 212 using older 209 # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.kYB7silD/pullseq_1.0.2-5.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.kYB7silD/pullseq_1.0.2-5.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.kYB7silD/pullseq_1.0.2-5.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.kYB7silD/b1/pullseq_1.0.2-5_amd64.changes /srv/reproducible-results/rbuild-debian/r-b-build.kYB7silD/b2/pullseq_1.0.2-5_amd64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.377s) 0.377s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.016s) 0.016s 12 calls diffoscope.comparators.binary.FilesystemFile ## specialize (total time: 0.000s) 0.000s 1 call specialize Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 719ms CPU time consumed: 718ms Sat Jun 22 17:10:59 UTC 2024 I: diffoscope 271 found no differences in the changes files, and a .buildinfo file also exists. Sat Jun 22 17:10:59 UTC 2024 I: pullseq from trixie built successfully and reproducibly on amd64. Sat Jun 22 17:11:02 UTC 2024 I: Submitting .buildinfo files to external archives: Sat Jun 22 17:11:02 UTC 2024 I: Submitting 8.0K b1/pullseq_1.0.2-5_amd64.buildinfo.asc Sat Jun 22 17:11:03 UTC 2024 I: Submitting 8.0K b2/pullseq_1.0.2-5_amd64.buildinfo.asc Sat Jun 22 17:11:04 UTC 2024 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Sat Jun 22 17:11:04 UTC 2024 I: Done submitting .buildinfo files. Sat Jun 22 17:11:04 UTC 2024 I: Removing signed pullseq_1.0.2-5_amd64.buildinfo.asc files: removed './b1/pullseq_1.0.2-5_amd64.buildinfo.asc' removed './b2/pullseq_1.0.2-5_amd64.buildinfo.asc'