Wed May 1 18:22:59 UTC 2024 I: starting to build poretools/trixie/amd64 on jenkins on '2024-05-01 18:22' Wed May 1 18:22:59 UTC 2024 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/amd64_5/5704/console.log Wed May 1 18:22:59 UTC 2024 I: Downloading source for trixie/poretools=0.6.0+dfsg-6 --2024-05-01 18:22:59-- http://deb.debian.org/debian/pool/main/p/poretools/poretools_0.6.0%2bdfsg-6.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 1556 (1.5K) [text/prs.lines.tag] Saving to: ‘poretools_0.6.0+dfsg-6.dsc’ 0K . 100% 204M=0s 2024-05-01 18:22:59 (204 MB/s) - ‘poretools_0.6.0+dfsg-6.dsc’ saved [1556/1556] Wed May 1 18:22:59 UTC 2024 I: poretools_0.6.0+dfsg-6.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: poretools Binary: poretools, poretools-data Architecture: all Version: 0.6.0+dfsg-6 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille Homepage: https://poretools.readthedocs.org Standards-Version: 4.5.0 Vcs-Browser: https://salsa.debian.org/med-team/poretools Vcs-Git: https://salsa.debian.org/med-team/poretools.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13), dh-python, python3-all, python3-setuptools, python3-h5py, python3-matplotlib, python3-seaborn, python3-pandas Package-List: poretools deb science optional arch=all poretools-data deb science optional arch=all Checksums-Sha1: 791068315b8110d4f2c29d429ac67b1792971653 68116283 poretools_0.6.0+dfsg.orig.tar.gz 9f1f0ac04497e35c1754a81f0fd4ac569e127817 10156 poretools_0.6.0+dfsg-6.debian.tar.xz Checksums-Sha256: ee7e0f9526bc533e04851ee5d873675a42b0566c0bfdc8d5808ff989bf79f8b7 68116283 poretools_0.6.0+dfsg.orig.tar.gz 7d44e27f67774bcba16c239c61e43a1407607985861fe72cd67b74a62e673421 10156 poretools_0.6.0+dfsg-6.debian.tar.xz Files: 9a71cb4a50cafbfb7711134c904051c1 68116283 poretools_0.6.0+dfsg.orig.tar.gz 80e155caa86b3742eca69f7c5612b460 10156 poretools_0.6.0+dfsg-6.debian.tar.xz -----BEGIN PGP SIGNATURE----- iHUEARYIAB0WIQSglbZu4JAkvuai8HIqJ5BL1yQ+2gUCY61TIQAKCRAqJ5BL1yQ+ 2itXAQDVNuGM4IAd9GWNWvCWg8nl+19wYHKzGgimjDaCKlx8/gEA9LEZs728ikfA akISyw5Px4gsCxzLczFKPPZ0BKAWjgA= =kbF6 -----END PGP SIGNATURE----- Wed May 1 18:22:59 UTC 2024 I: Checking whether the package is not for us Wed May 1 18:22:59 UTC 2024 I: Starting 1st build on remote node ionos11-amd64.debian.net. Wed May 1 18:22:59 UTC 2024 I: Preparing to do remote build '1' on ionos11-amd64.debian.net. Wed May 1 18:29:22 UTC 2024 I: Deleting $TMPDIR on ionos11-amd64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Wed May 1 06:23:03 -12 2024 I: pbuilder-time-stamp: 1714587783 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [poretools_0.6.0+dfsg-6.dsc] I: copying [./poretools_0.6.0+dfsg.orig.tar.gz] I: copying [./poretools_0.6.0+dfsg-6.debian.tar.xz] I: Extracting source gpgv: Signature made Thu Dec 29 08:43:13 2022 gpgv: using EDDSA key A095B66EE09024BEE6A2F0722A27904BD7243EDA gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./poretools_0.6.0+dfsg-6.dsc: no acceptable signature found dpkg-source: info: extracting poretools in poretools-0.6.0+dfsg dpkg-source: info: unpacking poretools_0.6.0+dfsg.orig.tar.gz dpkg-source: info: unpacking poretools_0.6.0+dfsg-6.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying python3.patch dpkg-source: info: applying matplotlib.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/755278/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='amd64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=20 ' DISTRIBUTION='trixie' HOME='/root' HOST_ARCH='amd64' IFS=' ' INVOCATION_ID='27947088820245289c63ba0a4e7d735a' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='755278' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.d89gSlYQ/pbuilderrc_UCbl --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.d89gSlYQ/b1 --logfile b1/build.log poretools_0.6.0+dfsg-6.dsc' SUDO_GID='111' SUDO_UID='106' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://46.16.76.132:3128' I: uname -a Linux ionos11-amd64 6.1.0-20-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.85-1 (2024-04-11) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Apr 22 12:43 /bin -> usr/bin I: user script /srv/workspace/pbuilder/755278/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-python, python3-all, python3-setuptools, python3-h5py, python3-matplotlib, python3-seaborn, python3-pandas dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19901 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-python; however: Package dh-python is not installed. pbuilder-satisfydepends-dummy depends on python3-all; however: Package python3-all is not installed. pbuilder-satisfydepends-dummy depends on python3-setuptools; however: Package python3-setuptools is not installed. pbuilder-satisfydepends-dummy depends on python3-h5py; however: Package python3-h5py is not installed. pbuilder-satisfydepends-dummy depends on python3-matplotlib; however: Package python3-matplotlib is not installed. pbuilder-satisfydepends-dummy depends on python3-seaborn; however: Package python3-seaborn is not installed. pbuilder-satisfydepends-dummy depends on python3-pandas; however: Package python3-pandas is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libdebhelper-perl{a} libelf1t64{a} libfile-stripnondeterminism-perl{a} libicu72{a} libmagic-mgc{a} libmagic1t64{a} libpipeline1{a} libsub-override-perl{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 30 newly installed, 0 to remove and 0 not upgraded. Need to get 19.0 MB of archives. After unpacking 73.5 MB will be used. The following packages have unmet dependencies: pbuilder-satisfydepends-dummy : Depends: dh-python but it is not installable Depends: python3-all but it is not installable Depends: python3-setuptools but it is not installable Depends: python3-h5py but it is not installable Depends: python3-matplotlib but it is not installable Depends: python3-seaborn but it is not installable Depends: python3-pandas but it is not installable The following actions will resolve these dependencies: Remove the following packages: 1) libdb5.3 [5.3.28+dfsg2-4+b1 (now)] 2) libssl3 [3.1.5-1 (now)] Install the following packages: 3) blt [2.5.3+dfsg-7 (testing)] 4) dh-python [6.20240422 (testing)] 5) fontconfig-config [2.15.0-1.1 (testing)] 6) fonts-dejavu-core [2.37-8 (testing)] 7) fonts-dejavu-mono [2.37-8 (testing)] 8) fonts-lyx [2.4.0~RC4-1 (testing)] 9) ibverbs-providers [50.0-2+b1 (testing)] 10) libaec0 [1.1.3-1 (testing)] 11) libamd-comgr2 [6.0+git20231212.4510c28+dfsg-3+b1 (testing)] 12) libamdhip64-5 [5.7.1-3 (testing)] 13) libblis4-serial [0.9.0-1+b2 (testing)] 14) libbrotli1 [1.1.0-2+b3 (testing)] 15) libbsd0 [0.12.2-1 (testing)] 16) libcbor0.10 [0.10.2-1.1 (testing)] 17) libcurl4t64 [8.7.1-3 (testing)] 18) libdb5.3t64 [5.3.28+dfsg2-7 (testing)] 19) libdeflate0 [1.20-1 (testing)] 20) libdrm-amdgpu1 [2.4.120-2 (testing)] 21) libdrm-common [2.4.120-2 (testing)] 22) libdrm2 [2.4.120-2 (testing)] 23) libedit2 [3.1-20230828-1+b1 (testing)] 24) libevent-core-2.1-7t64 [2.1.12-stable-8.1+b3 (testing)] 25) libevent-pthreads-2.1-7t64 [2.1.12-stable-8.1+b3 (testing)] 26) libexpat1 [2.6.2-1 (testing)] 27) libfabric1 [1.17.0-3+b1 (testing)] 28) libfido2-1 [1.14.0-1+b2 (testing)] 29) libfontconfig1 [2.15.0-1.1 (testing)] 30) libfreetype6 [2.13.2+dfsg-1+b4 (testing)] 31) libfribidi0 [1.0.13-3+b1 (testing)] 32) libgfortran5 [14-20240330-1 (testing)] 33) libglib2.0-0t64 [2.78.4-7 (testing)] 34) libgraphite2-3 [1.3.14-2 (testing)] 35) libharfbuzz0b [8.3.0-2+b1 (testing)] 36) libhdf5-openmpi-103-1 [1.10.10+repack-3+b1 (testing)] 37) libhdf5-openmpi-hl-100 [1.10.10+repack-3+b1 (testing)] 38) libhsa-runtime64-1 [5.7.1-2 (testing)] 39) libhsakmt1 [5.7.0-1 (testing)] 40) libhwloc-plugins [2.10.0-1+b1 (testing)] 41) libhwloc15 [2.10.0-1+b1 (testing)] 42) libibverbs1 [50.0-2+b1 (testing)] 43) libimagequant0 [2.18.0-1+b1 (testing)] 44) libjbig0 [2.1-6.1+b1 (testing)] 45) libjpeg62-turbo [1:2.1.5-3 (testing)] 46) libjs-jquery [3.6.1+dfsg+~3.5.14-1 (testing)] 47) libjs-jquery-ui [1.13.2+dfsg-1 (testing)] 48) liblapack3 [3.12.0-3 (testing)] 49) liblbfgsb0 [3.0+dfsg.4-1+b1 (testing)] 50) liblcms2-2 [2.14-2+b1 (testing)] 51) libldap-2.5-0 [2.5.13+dfsg-5+b3 (testing)] 52) liblerc4 [4.0.0+ds-4+b1 (testing)] 53) libllvm17t64 [1:17.0.6-11 (testing)] 54) liblzf1 [3.6-4+b1 (testing)] 55) libmunge2 [0.5.15-4 (testing)] 56) libnghttp2-14 [1.59.0-1 (testing)] 57) libnl-3-200 [3.7.0-0.3 (testing)] 58) libnl-route-3-200 [3.7.0-0.3 (testing)] 59) libnuma1 [2.0.18-1 (testing)] 60) libopenjp2-7 [2.5.0-2+b3 (testing)] 61) libopenmpi3 [4.1.6-5 (testing)] 62) libpciaccess0 [0.17-3+b1 (testing)] 63) libpmix2 [5.0.1-4+b1 (testing)] 64) libpng16-16t64 [1.6.43-5 (testing)] 65) libpsl5t64 [0.21.2-1.1 (testing)] 66) libpsm-infinipath1 [3.3+20.604758e7-6.3 (testing)] 67) libpsm2-2 [11.2.185-2 (testing)] 68) libpython3-stdlib [3.11.8-1 (testing)] 69) libpython3.11-minimal [3.11.9-1 (testing)] 70) libpython3.11-stdlib [3.11.9-1 (testing)] 71) libpython3.12-minimal [3.12.3-1 (testing)] 72) libpython3.12-stdlib [3.12.3-1 (testing)] 73) libqhull-r8.0 [2020.2-6+b1 (testing)] 74) libraqm0 [0.10.1-1+b1 (testing)] 75) librdmacm1t64 [50.0-2+b1 (testing)] 76) libreadline8t64 [8.2-4 (testing)] 77) librtmp1 [2.4+20151223.gitfa8646d.1-2+b4 (testing)] 78) libsasl2-2 [2.1.28+dfsg1-4+b1 (testing)] 79) libsasl2-modules-db [2.1.28+dfsg1-4+b1 (testing)] 80) libsharpyuv0 [1.3.2-0.4+b1 (testing)] 81) libssh2-1t64 [1.11.0-4.1+b2 (testing)] 82) libssl3t64 [3.2.1-3 (testing)] 83) libsz2 [1.1.3-1 (testing)] 84) libtcl8.6 [8.6.14+dfsg-1 (testing)] 85) libtiff6 [4.5.1+git230720-4 (testing)] 86) libtk8.6 [8.6.14-1 (testing)] 87) libucx0 [1.16.0+ds-5 (testing)] 88) libwebp7 [1.3.2-0.4+b1 (testing)] 89) libwebpdemux2 [1.3.2-0.4+b1 (testing)] 90) libwebpmux3 [1.3.2-0.4+b1 (testing)] 91) libx11-6 [2:1.8.7-1+b1 (testing)] 92) libx11-data [2:1.8.7-1 (testing)] 93) libxau6 [1:1.0.9-1+b1 (testing)] 94) libxcb1 [1.15-1 (testing)] 95) libxdmcp6 [1:1.1.2-3+b1 (testing)] 96) libxext6 [2:1.3.4-1+b1 (testing)] 97) libxft2 [2.3.6-1+b1 (testing)] 98) libxnvctrl0 [535.171.04-1 (testing)] 99) libxrender1 [1:0.9.10-1.1+b1 (testing)] 100) libxslt1.1 [1.1.35-1+b1 (testing)] 101) libxss1 [1:1.2.3-1+b1 (testing)] 102) libz3-4 [4.8.12-3.1+b2 (testing)] 103) media-types [10.1.0 (testing)] 104) mpi-default-bin [1.15 (testing)] 105) netbase [6.4 (testing)] 106) ocl-icd-libopencl1 [2.3.2-1+b1 (testing)] 107) openmpi-bin [4.1.6-5 (testing)] 108) openmpi-common [4.1.6-5 (testing)] 109) openssh-client [1:9.6p1-4 (testing)] 110) python-matplotlib-data [3.6.3-1 (testing)] 111) python3 [3.11.8-1 (testing)] 112) python3-all [3.11.8-1 (testing)] 113) python3-appdirs [1.4.4-4 (testing)] 114) python3-attr [23.2.0-2 (testing)] 115) python3-brotli [1.1.0-2+b3 (testing)] 116) python3-contourpy [1.0.7-3 (testing)] 117) python3-cycler [0.12.1-1 (testing)] 118) python3-dateutil [2.9.0-2 (testing)] 119) python3-decorator [5.1.1-5 (testing)] 120) python3-distutils [3.12.3-1 (testing)] 121) python3-fonttools [4.46.0-1 (testing)] 122) python3-fs [2.4.16-4 (testing)] 123) python3-h5py [3.10.0-1 (testing)] 124) python3-h5py-mpi [3.10.0-1 (testing)] 125) python3-kiwisolver [1.4.5-1 (testing)] 126) python3-lib2to3 [3.12.3-1 (testing)] 127) python3-lxml [5.1.0-1 (testing)] 128) python3-lz4 [4.0.2+dfsg-1+b3 (testing)] 129) python3-matplotlib [3.6.3-1+b2 (testing)] 130) python3-minimal [3.11.8-1 (testing)] 131) python3-mpi4py [3.1.5-5 (testing)] 132) python3-mpmath [1.3.0-1 (testing)] 133) python3-munkres [1.1.4-3 (testing)] 134) python3-numpy [1:1.24.2-2 (testing)] 135) python3-packaging [24.0-1 (testing)] 136) python3-pandas [2.1.4+dfsg-5 (testing)] 137) python3-pandas-lib [2.1.4+dfsg-5 (testing)] 138) python3-pil [10.3.0-2 (testing)] 139) python3-pil.imagetk [10.3.0-2 (testing)] 140) python3-pkg-resources [68.1.2-2 (testing)] 141) python3-pyparsing [3.1.2-1 (testing)] 142) python3-scipy [1.11.4-6 (testing)] 143) python3-seaborn [0.13.2-3 (testing)] 144) python3-setuptools [68.1.2-2 (testing)] 145) python3-six [1.16.0-6 (testing)] 146) python3-sympy [1.12-7 (testing)] 147) python3-tk [3.12.3-1 (testing)] 148) python3-tz [2024.1-2 (testing)] 149) python3-ufolib2 [0.16.0+dfsg1-1 (testing)] 150) python3.11 [3.11.9-1 (testing)] 151) python3.11-minimal [3.11.9-1 (testing)] 152) python3.12 [3.12.3-1 (testing)] 153) python3.12-minimal [3.12.3-1 (testing)] 154) readline-common [8.2-4 (testing)] 155) tk8.6-blt2.5 [2.5.3+dfsg-7 (testing)] 156) tzdata [2024a-3 (testing)] 157) unicode-data [15.1.0-1 (testing)] 158) x11-common [1:7.7+23 (testing)] The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} blt{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-dejavu-mono{a} fonts-lyx{a} gettext{a} gettext-base{a} groff-base{a} ibverbs-providers{a} intltool-debian{a} libaec0{a} libamd-comgr2{a} libamdhip64-5{a} libarchive-zip-perl{a} libblis4-serial{a} libbrotli1{a} libbsd0{a} libcbor0.10{a} libcurl4t64{a} libdb5.3t64{a} libdebhelper-perl{a} libdeflate0{a} libdrm-amdgpu1{a} libdrm-common{a} libdrm2{a} libedit2{a} libelf1t64{a} libevent-core-2.1-7t64{a} libevent-pthreads-2.1-7t64{a} libexpat1{a} libfabric1{a} libfido2-1{a} libfile-stripnondeterminism-perl{a} libfontconfig1{a} libfreetype6{a} libfribidi0{a} libgfortran5{a} libglib2.0-0t64{a} libgraphite2-3{a} libharfbuzz0b{a} libhdf5-openmpi-103-1{a} libhdf5-openmpi-hl-100{a} libhsa-runtime64-1{a} libhsakmt1{a} libhwloc-plugins{a} libhwloc15{a} libibverbs1{a} libicu72{a} libimagequant0{a} libjbig0{a} libjpeg62-turbo{a} libjs-jquery{a} libjs-jquery-ui{a} liblapack3{a} liblbfgsb0{a} liblcms2-2{a} libldap-2.5-0{a} liblerc4{a} libllvm17t64{a} liblzf1{a} libmagic-mgc{a} libmagic1t64{a} libmunge2{a} libnghttp2-14{a} libnl-3-200{a} libnl-route-3-200{a} libnuma1{a} libopenjp2-7{a} libopenmpi3{a} libpciaccess0{a} libpipeline1{a} libpmix2{a} libpng16-16t64{a} libpsl5t64{a} libpsm-infinipath1{a} libpsm2-2{a} libpython3-stdlib{a} libpython3.11-minimal{a} libpython3.11-stdlib{a} libpython3.12-minimal{a} libpython3.12-stdlib{a} libqhull-r8.0{a} libraqm0{a} librdmacm1t64{a} libreadline8t64{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libsharpyuv0{a} libssh2-1t64{a} libssl3t64{a} libsub-override-perl{a} libsz2{a} libtcl8.6{a} libtiff6{a} libtk8.6{a} libtool{a} libuchardet0{a} libucx0{a} libwebp7{a} libwebpdemux2{a} libwebpmux3{a} libx11-6{a} libx11-data{a} libxau6{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxft2{a} libxml2{a} libxnvctrl0{a} libxrender1{a} libxslt1.1{a} libxss1{a} libz3-4{a} m4{a} man-db{a} media-types{a} mpi-default-bin{a} netbase{a} ocl-icd-libopencl1{a} openmpi-bin{a} openmpi-common{a} openssh-client{a} po-debconf{a} python-matplotlib-data{a} python3{a} python3-all{a} python3-appdirs{a} python3-attr{a} python3-brotli{a} python3-contourpy{a} python3-cycler{a} python3-dateutil{a} python3-decorator{a} python3-distutils{a} python3-fonttools{a} python3-fs{a} python3-h5py{a} python3-h5py-mpi{a} python3-kiwisolver{a} python3-lib2to3{a} python3-lxml{a} python3-lz4{a} python3-matplotlib{a} python3-minimal{a} python3-mpi4py{a} python3-mpmath{a} python3-munkres{a} python3-numpy{a} python3-packaging{a} python3-pandas{a} python3-pandas-lib{a} python3-pil{a} python3-pil.imagetk{a} python3-pkg-resources{a} python3-pyparsing{a} python3-scipy{a} python3-seaborn{a} python3-setuptools{a} python3-six{a} python3-sympy{a} python3-tk{a} python3-tz{a} python3-ufolib2{a} python3.11{a} python3.11-minimal{a} python3.12{a} python3.12-minimal{a} readline-common{a} sensible-utils{a} tk8.6-blt2.5{a} tzdata{a} unicode-data{a} x11-common{a} The following packages will be REMOVED: libdb5.3{a} libssl3{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl isympy-common javascript-common libarchive-cpio-perl libglib2.0-data libldap-common libltdl-dev libmail-sendmail-perl libsasl2-modules lynx publicsuffix python3-bottleneck python3-bs4 python3-cssselect python3-html5lib python3-jinja2 python3-numexpr python3-odf python3-olefile python3-openpyxl python3-patsy python3-tables shared-mime-info wget xauth xdg-user-dirs 0 packages upgraded, 186 newly installed, 2 to remove and 0 not upgraded. Need to get 190 MB of archives. After unpacking 831 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main amd64 libdb5.3t64 amd64 5.3.28+dfsg2-7 [697 kB] Get: 2 http://deb.debian.org/debian trixie/main amd64 libssl3t64 amd64 3.2.1-3 [2244 kB] Get: 3 http://deb.debian.org/debian trixie/main amd64 libpython3.11-minimal amd64 3.11.9-1 [817 kB] Get: 4 http://deb.debian.org/debian trixie/main amd64 libexpat1 amd64 2.6.2-1 [103 kB] Get: 5 http://deb.debian.org/debian trixie/main amd64 python3.11-minimal amd64 3.11.9-1 [1879 kB] Get: 6 http://deb.debian.org/debian trixie/main amd64 python3-minimal amd64 3.11.8-1 [26.3 kB] Get: 7 http://deb.debian.org/debian trixie/main amd64 media-types all 10.1.0 [26.9 kB] Get: 8 http://deb.debian.org/debian trixie/main amd64 netbase all 6.4 [12.8 kB] Get: 9 http://deb.debian.org/debian trixie/main amd64 tzdata all 2024a-3 [255 kB] Get: 10 http://deb.debian.org/debian trixie/main amd64 readline-common all 8.2-4 [69.3 kB] Get: 11 http://deb.debian.org/debian trixie/main amd64 libreadline8t64 amd64 8.2-4 [167 kB] Get: 12 http://deb.debian.org/debian trixie/main amd64 libpython3.11-stdlib amd64 3.11.9-1 [1792 kB] Get: 13 http://deb.debian.org/debian trixie/main amd64 python3.11 amd64 3.11.9-1 [602 kB] Get: 14 http://deb.debian.org/debian trixie/main amd64 libpython3-stdlib amd64 3.11.8-1 [9332 B] Get: 15 http://deb.debian.org/debian trixie/main amd64 python3 amd64 3.11.8-1 [27.4 kB] Get: 16 http://deb.debian.org/debian trixie/main amd64 libpython3.12-minimal amd64 3.12.3-1 [809 kB] Get: 17 http://deb.debian.org/debian trixie/main amd64 python3.12-minimal amd64 3.12.3-1 [2139 kB] Get: 18 http://deb.debian.org/debian trixie/main amd64 sensible-utils all 0.0.22 [22.4 kB] Get: 19 http://deb.debian.org/debian trixie/main amd64 libmagic-mgc amd64 1:5.45-3 [314 kB] Get: 20 http://deb.debian.org/debian trixie/main amd64 libmagic1t64 amd64 1:5.45-3 [105 kB] Get: 21 http://deb.debian.org/debian trixie/main amd64 file amd64 1:5.45-3 [42.9 kB] Get: 22 http://deb.debian.org/debian trixie/main amd64 gettext-base amd64 0.21-14+b1 [161 kB] Get: 23 http://deb.debian.org/debian trixie/main amd64 libuchardet0 amd64 0.0.8-1+b1 [68.8 kB] Get: 24 http://deb.debian.org/debian trixie/main amd64 groff-base amd64 1.23.0-3+b1 [1180 kB] Get: 25 http://deb.debian.org/debian trixie/main amd64 bsdextrautils amd64 2.39.3-6 [89.4 kB] Get: 26 http://deb.debian.org/debian trixie/main amd64 libpipeline1 amd64 1.5.7-2 [38.0 kB] Get: 27 http://deb.debian.org/debian trixie/main amd64 man-db amd64 2.12.0-3 [1401 kB] Get: 28 http://deb.debian.org/debian trixie/main amd64 libbsd0 amd64 0.12.2-1 [131 kB] Get: 29 http://deb.debian.org/debian trixie/main amd64 libedit2 amd64 3.1-20230828-1+b1 [93.5 kB] Get: 30 http://deb.debian.org/debian trixie/main amd64 libcbor0.10 amd64 0.10.2-1.1 [27.8 kB] Get: 31 http://deb.debian.org/debian trixie/main amd64 libfido2-1 amd64 1.14.0-1+b2 [77.7 kB] Get: 32 http://deb.debian.org/debian trixie/main amd64 openssh-client amd64 1:9.6p1-4 [975 kB] Get: 33 http://deb.debian.org/debian trixie/main amd64 m4 amd64 1.4.19-4 [287 kB] Get: 34 http://deb.debian.org/debian trixie/main amd64 autoconf all 2.71-3 [332 kB] Get: 35 http://deb.debian.org/debian trixie/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get: 36 http://deb.debian.org/debian trixie/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get: 37 http://deb.debian.org/debian trixie/main amd64 autopoint all 0.21-14 [496 kB] Get: 38 http://deb.debian.org/debian trixie/main amd64 libtcl8.6 amd64 8.6.14+dfsg-1 [1034 kB] Get: 39 http://deb.debian.org/debian trixie/main amd64 libbrotli1 amd64 1.1.0-2+b3 [305 kB] Get: 40 http://deb.debian.org/debian trixie/main amd64 libpng16-16t64 amd64 1.6.43-5 [278 kB] Get: 41 http://deb.debian.org/debian trixie/main amd64 libfreetype6 amd64 2.13.2+dfsg-1+b4 [439 kB] Get: 42 http://deb.debian.org/debian trixie/main amd64 fonts-dejavu-mono all 2.37-8 [489 kB] Get: 43 http://deb.debian.org/debian trixie/main amd64 fonts-dejavu-core all 2.37-8 [840 kB] Get: 44 http://deb.debian.org/debian trixie/main amd64 fontconfig-config amd64 2.15.0-1.1 [317 kB] Get: 45 http://deb.debian.org/debian trixie/main amd64 libfontconfig1 amd64 2.15.0-1.1 [388 kB] Get: 46 http://deb.debian.org/debian trixie/main amd64 libxau6 amd64 1:1.0.9-1+b1 [18.1 kB] Get: 47 http://deb.debian.org/debian trixie/main amd64 libxdmcp6 amd64 1:1.1.2-3+b1 [24.3 kB] Get: 48 http://deb.debian.org/debian trixie/main amd64 libxcb1 amd64 1.15-1 [144 kB] Get: 49 http://deb.debian.org/debian trixie/main amd64 libx11-data all 2:1.8.7-1 [328 kB] Get: 50 http://deb.debian.org/debian trixie/main amd64 libx11-6 amd64 2:1.8.7-1+b1 [799 kB] Get: 51 http://deb.debian.org/debian trixie/main amd64 libxrender1 amd64 1:0.9.10-1.1+b1 [27.9 kB] Get: 52 http://deb.debian.org/debian trixie/main amd64 libxft2 amd64 2.3.6-1+b1 [54.2 kB] Get: 53 http://deb.debian.org/debian trixie/main amd64 libxext6 amd64 2:1.3.4-1+b1 [52.9 kB] Get: 54 http://deb.debian.org/debian trixie/main amd64 x11-common all 1:7.7+23 [252 kB] Get: 55 http://deb.debian.org/debian trixie/main amd64 libxss1 amd64 1:1.2.3-1+b1 [17.0 kB] Get: 56 http://deb.debian.org/debian trixie/main amd64 libtk8.6 amd64 8.6.14-1 [784 kB] Get: 57 http://deb.debian.org/debian trixie/main amd64 tk8.6-blt2.5 amd64 2.5.3+dfsg-7 [586 kB] Get: 58 http://deb.debian.org/debian trixie/main amd64 blt amd64 2.5.3+dfsg-7 [6024 B] Get: 59 http://deb.debian.org/debian trixie/main amd64 libdebhelper-perl all 13.15.3 [88.0 kB] Get: 60 http://deb.debian.org/debian trixie/main amd64 libtool all 2.4.7-7 [517 kB] Get: 61 http://deb.debian.org/debian trixie/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 62 http://deb.debian.org/debian trixie/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 63 http://deb.debian.org/debian trixie/main amd64 libsub-override-perl all 0.10-1 [10.6 kB] Get: 64 http://deb.debian.org/debian trixie/main amd64 libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get: 65 http://deb.debian.org/debian trixie/main amd64 dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get: 66 http://deb.debian.org/debian trixie/main amd64 libelf1t64 amd64 0.191-1+b1 [189 kB] Get: 67 http://deb.debian.org/debian trixie/main amd64 dwz amd64 0.15-1+b1 [110 kB] Get: 68 http://deb.debian.org/debian trixie/main amd64 libicu72 amd64 72.1-4+b1 [9395 kB] Get: 69 http://deb.debian.org/debian trixie/main amd64 libxml2 amd64 2.9.14+dfsg-1.3+b3 [692 kB] Get: 70 http://deb.debian.org/debian trixie/main amd64 gettext amd64 0.21-14+b1 [1301 kB] Get: 71 http://deb.debian.org/debian trixie/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 72 http://deb.debian.org/debian trixie/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 73 http://deb.debian.org/debian trixie/main amd64 debhelper all 13.15.3 [901 kB] Get: 74 http://deb.debian.org/debian trixie/main amd64 python3-pkg-resources all 68.1.2-2 [241 kB] Get: 75 http://deb.debian.org/debian trixie/main amd64 python3-lib2to3 all 3.12.3-1 [77.6 kB] Get: 76 http://deb.debian.org/debian trixie/main amd64 python3-distutils all 3.12.3-1 [131 kB] Get: 77 http://deb.debian.org/debian trixie/main amd64 python3-setuptools all 68.1.2-2 [468 kB] Get: 78 http://deb.debian.org/debian trixie/main amd64 dh-python all 6.20240422 [107 kB] Get: 79 http://deb.debian.org/debian trixie/main amd64 fonts-lyx all 2.4.0~RC4-1 [189 kB] Get: 80 http://deb.debian.org/debian trixie/main amd64 libnl-3-200 amd64 3.7.0-0.3 [59.0 kB] Get: 81 http://deb.debian.org/debian trixie/main amd64 libnl-route-3-200 amd64 3.7.0-0.3 [181 kB] Get: 82 http://deb.debian.org/debian trixie/main amd64 libibverbs1 amd64 50.0-2+b1 [61.7 kB] Get: 83 http://deb.debian.org/debian trixie/main amd64 ibverbs-providers amd64 50.0-2+b1 [342 kB] Get: 84 http://deb.debian.org/debian trixie/main amd64 libaec0 amd64 1.1.3-1 [23.4 kB] Get: 85 http://deb.debian.org/debian trixie/main amd64 libz3-4 amd64 4.8.12-3.1+b2 [7346 kB] Get: 86 http://deb.debian.org/debian trixie/main amd64 libllvm17t64 amd64 1:17.0.6-11 [23.7 MB] Get: 87 http://deb.debian.org/debian trixie/main amd64 libamd-comgr2 amd64 6.0+git20231212.4510c28+dfsg-3+b1 [13.0 MB] Get: 88 http://deb.debian.org/debian trixie/main amd64 libdrm-common all 2.4.120-2 [7688 B] Get: 89 http://deb.debian.org/debian trixie/main amd64 libdrm2 amd64 2.4.120-2 [38.1 kB] Get: 90 http://deb.debian.org/debian trixie/main amd64 libdrm-amdgpu1 amd64 2.4.120-2 [21.4 kB] Get: 91 http://deb.debian.org/debian trixie/main amd64 libnuma1 amd64 2.0.18-1 [21.9 kB] Get: 92 http://deb.debian.org/debian trixie/main amd64 libhsakmt1 amd64 5.7.0-1 [60.7 kB] Get: 93 http://deb.debian.org/debian trixie/main amd64 libhsa-runtime64-1 amd64 5.7.1-2 [504 kB] Get: 94 http://deb.debian.org/debian trixie/main amd64 libamdhip64-5 amd64 5.7.1-3 [8760 kB] Get: 95 http://deb.debian.org/debian trixie/main amd64 libblis4-serial amd64 0.9.0-1+b2 [5282 kB] Get: 96 http://deb.debian.org/debian trixie/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg1-4+b1 [19.7 kB] Get: 97 http://deb.debian.org/debian trixie/main amd64 libsasl2-2 amd64 2.1.28+dfsg1-4+b1 [57.0 kB] Get: 98 http://deb.debian.org/debian trixie/main amd64 libldap-2.5-0 amd64 2.5.13+dfsg-5+b3 [184 kB] Get: 99 http://deb.debian.org/debian trixie/main amd64 libnghttp2-14 amd64 1.59.0-1 [74.3 kB] Get: 100 http://deb.debian.org/debian trixie/main amd64 libpsl5t64 amd64 0.21.2-1.1 [56.8 kB] Get: 101 http://deb.debian.org/debian trixie/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b4 [58.5 kB] Get: 102 http://deb.debian.org/debian trixie/main amd64 libssh2-1t64 amd64 1.11.0-4.1+b2 [215 kB] Get: 103 http://deb.debian.org/debian trixie/main amd64 libcurl4t64 amd64 8.7.1-3 [441 kB] Get: 104 http://deb.debian.org/debian trixie/main amd64 libdeflate0 amd64 1.20-1 [46.0 kB] Get: 105 http://deb.debian.org/debian trixie/main amd64 libevent-core-2.1-7t64 amd64 2.1.12-stable-8.1+b3 [132 kB] Get: 106 http://deb.debian.org/debian trixie/main amd64 libevent-pthreads-2.1-7t64 amd64 2.1.12-stable-8.1+b3 [54.1 kB] Get: 107 http://deb.debian.org/debian trixie/main amd64 libpsm-infinipath1 amd64 3.3+20.604758e7-6.3 [170 kB] Get: 108 http://deb.debian.org/debian trixie/main amd64 libpsm2-2 amd64 11.2.185-2 [180 kB] Get: 109 http://deb.debian.org/debian trixie/main amd64 librdmacm1t64 amd64 50.0-2+b1 [70.2 kB] Get: 110 http://deb.debian.org/debian trixie/main amd64 libfabric1 amd64 1.17.0-3+b1 [628 kB] Get: 111 http://deb.debian.org/debian trixie/main amd64 libfribidi0 amd64 1.0.13-3+b1 [71.4 kB] Get: 112 http://deb.debian.org/debian trixie/main amd64 libgfortran5 amd64 14-20240330-1 [836 kB] Get: 113 http://deb.debian.org/debian trixie/main amd64 libglib2.0-0t64 amd64 2.78.4-7 [1455 kB] Get: 114 http://deb.debian.org/debian trixie/main amd64 libgraphite2-3 amd64 1.3.14-2 [74.9 kB] Get: 115 http://deb.debian.org/debian trixie/main amd64 libharfbuzz0b amd64 8.3.0-2+b1 [2214 kB] Get: 116 http://deb.debian.org/debian trixie/main amd64 libhwloc15 amd64 2.10.0-1+b1 [161 kB] Get: 117 http://deb.debian.org/debian trixie/main amd64 libmunge2 amd64 0.5.15-4 [19.8 kB] Get: 118 http://deb.debian.org/debian trixie/main amd64 libpciaccess0 amd64 0.17-3+b1 [51.9 kB] Get: 119 http://deb.debian.org/debian trixie/main amd64 libxnvctrl0 amd64 535.171.04-1 [13.8 kB] Get: 120 http://deb.debian.org/debian trixie/main amd64 ocl-icd-libopencl1 amd64 2.3.2-1+b1 [40.3 kB] Get: 121 http://deb.debian.org/debian trixie/main amd64 libhwloc-plugins amd64 2.10.0-1+b1 [18.0 kB] Get: 122 http://deb.debian.org/debian trixie/main amd64 libpmix2 amd64 5.0.1-4+b1 [645 kB] Get: 123 http://deb.debian.org/debian trixie/main amd64 libucx0 amd64 1.16.0+ds-5 [1109 kB] Get: 124 http://deb.debian.org/debian trixie/main amd64 libopenmpi3 amd64 4.1.6-5 [2427 kB] Get: 125 http://deb.debian.org/debian trixie/main amd64 libsz2 amd64 1.1.3-1 [7740 B] Get: 126 http://deb.debian.org/debian trixie/main amd64 libhdf5-openmpi-103-1 amd64 1.10.10+repack-3+b1 [1300 kB] Get: 127 http://deb.debian.org/debian trixie/main amd64 libhdf5-openmpi-hl-100 amd64 1.10.10+repack-3+b1 [63.4 kB] Get: 128 http://deb.debian.org/debian trixie/main amd64 libimagequant0 amd64 2.18.0-1+b1 [35.3 kB] Get: 129 http://deb.debian.org/debian trixie/main amd64 libjbig0 amd64 2.1-6.1+b1 [32.0 kB] Get: 130 http://deb.debian.org/debian trixie/main amd64 libjpeg62-turbo amd64 1:2.1.5-3 [167 kB] Get: 131 http://deb.debian.org/debian trixie/main amd64 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB] Get: 132 http://deb.debian.org/debian trixie/main amd64 libjs-jquery-ui all 1.13.2+dfsg-1 [250 kB] Get: 133 http://deb.debian.org/debian trixie/main amd64 liblapack3 amd64 3.12.0-3 [2407 kB] Get: 134 http://deb.debian.org/debian trixie/main amd64 liblbfgsb0 amd64 3.0+dfsg.4-1+b1 [29.1 kB] Get: 135 http://deb.debian.org/debian trixie/main amd64 liblcms2-2 amd64 2.14-2+b1 [154 kB] Get: 136 http://deb.debian.org/debian trixie/main amd64 liblerc4 amd64 4.0.0+ds-4+b1 [171 kB] Get: 137 http://deb.debian.org/debian trixie/main amd64 liblzf1 amd64 3.6-4+b1 [10.4 kB] Get: 138 http://deb.debian.org/debian trixie/main amd64 libopenjp2-7 amd64 2.5.0-2+b3 [190 kB] Get: 139 http://deb.debian.org/debian trixie/main amd64 libpython3.12-stdlib amd64 3.12.3-1 [1951 kB] Get: 140 http://deb.debian.org/debian trixie/main amd64 libqhull-r8.0 amd64 2020.2-6+b1 [245 kB] Get: 141 http://deb.debian.org/debian trixie/main amd64 libraqm0 amd64 0.10.1-1+b1 [14.2 kB] Get: 142 http://deb.debian.org/debian trixie/main amd64 libsharpyuv0 amd64 1.3.2-0.4+b1 [108 kB] Get: 143 http://deb.debian.org/debian trixie/main amd64 libwebp7 amd64 1.3.2-0.4+b1 [308 kB] Get: 144 http://deb.debian.org/debian trixie/main amd64 libtiff6 amd64 4.5.1+git230720-4 [322 kB] Get: 145 http://deb.debian.org/debian trixie/main amd64 libwebpdemux2 amd64 1.3.2-0.4+b1 [107 kB] Get: 146 http://deb.debian.org/debian trixie/main amd64 libwebpmux3 amd64 1.3.2-0.4+b1 [120 kB] Get: 147 http://deb.debian.org/debian trixie/main amd64 libxslt1.1 amd64 1.1.35-1+b1 [232 kB] Get: 148 http://deb.debian.org/debian trixie/main amd64 openmpi-common all 4.1.6-5 [168 kB] Get: 149 http://deb.debian.org/debian trixie/main amd64 openmpi-bin amd64 4.1.6-5 [226 kB] Get: 150 http://deb.debian.org/debian trixie/main amd64 mpi-default-bin amd64 1.15 [2408 B] Get: 151 http://deb.debian.org/debian trixie/main amd64 python-matplotlib-data all 3.6.3-1 [2744 kB] Get: 152 http://deb.debian.org/debian trixie/main amd64 python3.12 amd64 3.12.3-1 [659 kB] Get: 153 http://deb.debian.org/debian trixie/main amd64 python3-all amd64 3.11.8-1 [1056 B] Get: 154 http://deb.debian.org/debian trixie/main amd64 python3-appdirs all 1.4.4-4 [12.5 kB] Get: 155 http://deb.debian.org/debian trixie/main amd64 python3-attr all 23.2.0-2 [65.5 kB] Get: 156 http://deb.debian.org/debian trixie/main amd64 python3-brotli amd64 1.1.0-2+b3 [312 kB] Get: 157 http://deb.debian.org/debian trixie/main amd64 python3-numpy amd64 1:1.24.2-2 [6299 kB] Get: 158 http://deb.debian.org/debian trixie/main amd64 python3-contourpy amd64 1.0.7-3 [285 kB] Get: 159 http://deb.debian.org/debian trixie/main amd64 python3-cycler all 0.12.1-1 [9496 B] Get: 160 http://deb.debian.org/debian trixie/main amd64 python3-six all 1.16.0-6 [16.3 kB] Get: 161 http://deb.debian.org/debian trixie/main amd64 python3-dateutil all 2.9.0-2 [79.4 kB] Get: 162 http://deb.debian.org/debian trixie/main amd64 python3-decorator all 5.1.1-5 [15.1 kB] Get: 163 http://deb.debian.org/debian trixie/main amd64 python3-scipy amd64 1.11.4-6 [19.5 MB] Get: 164 http://deb.debian.org/debian trixie/main amd64 python3-munkres all 1.1.4-3 [11.5 kB] Get: 165 http://deb.debian.org/debian trixie/main amd64 python3-ufolib2 all 0.16.0+dfsg1-1 [32.9 kB] Get: 166 http://deb.debian.org/debian trixie/main amd64 python3-mpmath all 1.3.0-1 [419 kB] Get: 167 http://deb.debian.org/debian trixie/main amd64 python3-sympy all 1.12-7 [3869 kB] Get: 168 http://deb.debian.org/debian trixie/main amd64 python3-tz all 2024.1-2 [30.9 kB] Get: 169 http://deb.debian.org/debian trixie/main amd64 python3-fs all 2.4.16-4 [95.4 kB] Get: 170 http://deb.debian.org/debian trixie/main amd64 python3-lxml amd64 5.1.0-1 [2092 kB] Get: 171 http://deb.debian.org/debian trixie/main amd64 python3-lz4 amd64 4.0.2+dfsg-1+b3 [25.5 kB] Get: 172 http://deb.debian.org/debian trixie/main amd64 unicode-data all 15.1.0-1 [8547 kB] Get: 173 http://deb.debian.org/debian trixie/main amd64 python3-fonttools amd64 4.46.0-1 [1623 kB] Get: 174 http://deb.debian.org/debian trixie/main amd64 python3-mpi4py amd64 3.1.5-5 [759 kB] Get: 175 http://deb.debian.org/debian trixie/main amd64 python3-h5py-mpi amd64 3.10.0-1 [1405 kB] Get: 176 http://deb.debian.org/debian trixie/main amd64 python3-h5py all 3.10.0-1 [14.4 kB] Get: 177 http://deb.debian.org/debian trixie/main amd64 python3-kiwisolver amd64 1.4.5-1 [80.7 kB] Get: 178 http://deb.debian.org/debian trixie/main amd64 python3-pil amd64 10.3.0-2 [564 kB] Get: 179 http://deb.debian.org/debian trixie/main amd64 python3-tk amd64 3.12.3-1 [109 kB] Get: 180 http://deb.debian.org/debian trixie/main amd64 python3-pil.imagetk amd64 10.3.0-2 [79.5 kB] Get: 181 http://deb.debian.org/debian trixie/main amd64 python3-pyparsing all 3.1.2-1 [146 kB] Get: 182 http://deb.debian.org/debian trixie/main amd64 python3-packaging all 24.0-1 [45.5 kB] Get: 183 http://deb.debian.org/debian trixie/main amd64 python3-matplotlib amd64 3.6.3-1+b2 [8166 kB] Get: 184 http://deb.debian.org/debian trixie/main amd64 python3-pandas-lib amd64 2.1.4+dfsg-5 [7883 kB] Get: 185 http://deb.debian.org/debian trixie/main amd64 python3-pandas all 2.1.4+dfsg-5 [3015 kB] Get: 186 http://deb.debian.org/debian trixie/main amd64 python3-seaborn all 0.13.2-3 [215 kB] Fetched 190 MB in 10s (18.7 MB/s) debconf: delaying package configuration, since apt-utils is not installed dpkg: libdb5.3:amd64: dependency problems, but removing anyway as you requested: libperl5.38:amd64 depends on libdb5.3. libpam-modules:amd64 depends on libdb5.3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19901 files and directories currently installed.) Removing libdb5.3:amd64 (5.3.28+dfsg2-4+b1) ... Selecting previously unselected package libdb5.3t64:amd64. (Reading database ... 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Unpacking python3.11-minimal (3.11.9-1) ... Setting up libpython3.11-minimal:amd64 (3.11.9-1) ... Setting up libexpat1:amd64 (2.6.2-1) ... Setting up python3.11-minimal (3.11.9-1) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20218 files and directories currently installed.) Preparing to unpack .../0-python3-minimal_3.11.8-1_amd64.deb ... Unpacking python3-minimal (3.11.8-1) ... 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Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8 to /lib/x86_64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8.2 to /lib/x86_64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8 to /lib/x86_64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8.2 to /lib/x86_64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:amd64 (8.2-4) ... Selecting previously unselected package libpython3.11-stdlib:amd64. Preparing to unpack .../6-libpython3.11-stdlib_3.11.9-1_amd64.deb ... Unpacking libpython3.11-stdlib:amd64 (3.11.9-1) ... Selecting previously unselected package python3.11. Preparing to unpack .../7-python3.11_3.11.9-1_amd64.deb ... Unpacking python3.11 (3.11.9-1) ... Selecting previously unselected package libpython3-stdlib:amd64. 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Selecting previously unselected package python3-pandas-lib:amd64. Preparing to unpack .../169-python3-pandas-lib_2.1.4+dfsg-5_amd64.deb ... Unpacking python3-pandas-lib:amd64 (2.1.4+dfsg-5) ... Selecting previously unselected package python3-pandas. Preparing to unpack .../170-python3-pandas_2.1.4+dfsg-5_all.deb ... Unpacking python3-pandas (2.1.4+dfsg-5) ... Selecting previously unselected package python3-seaborn. Preparing to unpack .../171-python3-seaborn_0.13.2-3_all.deb ... Unpacking python3-seaborn (0.13.2-3) ... Setting up media-types (10.1.0) ... Setting up libpipeline1:amd64 (1.5.7-2) ... Setting up libgraphite2-3:amd64 (1.3.14-2) ... Setting up liblcms2-2:amd64 (2.14-2+b1) ... Setting up libsharpyuv0:amd64 (1.3.2-0.4+b1) ... Setting up libpciaccess0:amd64 (0.17-3+b1) ... Setting up libxau6:amd64 (1:1.0.9-1+b1) ... Setting up libicu72:amd64 (72.1-4+b1) ... Setting up liblerc4:amd64 (4.0.0+ds-4+b1) ... Setting up bsdextrautils (2.39.3-6) ... Setting up libmagic-mgc (1:5.45-3) ... Setting up libcbor0.10:amd64 (0.10.2-1.1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up fonts-lyx (2.4.0~RC4-1) ... Setting up libdebhelper-perl (13.15.3) ... Setting up libbrotli1:amd64 (1.1.0-2+b3) ... Setting up libmagic1t64:amd64 (1:5.45-3) ... Setting up libpython3.12-minimal:amd64 (3.12.3-1) ... Setting up x11-common (1:7.7+23) ... invoke-rc.d: could not determine current runlevel Setting up X socket directories... /tmp/.X11-unix /tmp/.ICE-unix. Setting up libpsl5t64:amd64 (0.21.2-1.1) ... Setting up libnghttp2-14:amd64 (1.59.0-1) ... Setting up libdeflate0:amd64 (1.20-1) ... Setting up gettext-base (0.21-14+b1) ... Setting up m4 (1.4.19-4) ... Setting up libqhull-r8.0:amd64 (2020.2-6+b1) ... Setting up libblis4-serial:amd64 (0.9.0-1+b2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/blis-serial/libblis.so.4 to provide /usr/lib/x86_64-linux-gnu/libblis.so.4 (libblis.so.4-x86_64-linux-gnu) in auto mode update-alternatives: using /usr/lib/x86_64-linux-gnu/blis-serial/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode Setting up file (1:5.45-3) ... Setting up libjbig0:amd64 (2.1-6.1+b1) ... Setting up libaec0:amd64 (1.1.3-1) ... Setting up libelf1t64:amd64 (0.191-1+b1) ... Setting up libsasl2-modules-db:amd64 (2.1.28+dfsg1-4+b1) ... Setting up tzdata (2024a-3) ... Current default time zone: 'Etc/UTC' Local time is now: Wed May 1 18:25:52 UTC 2024. Universal Time is now: Wed May 1 18:25:52 UTC 2024. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up unicode-data (15.1.0-1) ... Setting up autotools-dev (20220109.1) ... Setting up libz3-4:amd64 (4.8.12-3.1+b2) ... Setting up libglib2.0-0t64:amd64 (2.78.4-7) ... No schema files found: doing nothing. Setting up libmunge2:amd64 (0.5.15-4) ... Setting up libjpeg62-turbo:amd64 (1:2.1.5-3) ... Setting up libx11-data (2:1.8.7-1) ... Setting up librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b4) ... Setting up liblzf1:amd64 (3.6-4+b1) ... Setting up libfribidi0:amd64 (1.0.13-3+b1) ... Setting up libimagequant0:amd64 (2.18.0-1+b1) ... Setting up fonts-dejavu-mono (2.37-8) ... Setting up libpng16-16t64:amd64 (1.6.43-5) ... Setting up libhwloc15:amd64 (2.10.0-1+b1) ... Setting up libtcl8.6:amd64 (8.6.14+dfsg-1) ... Setting up autopoint (0.21-14) ... Setting up fonts-dejavu-core (2.37-8) ... Setting up libsasl2-2:amd64 (2.1.28+dfsg1-4+b1) ... Setting up libgfortran5:amd64 (14-20240330-1) ... Setting up autoconf (2.71-3) ... Setting up libwebp7:amd64 (1.3.2-0.4+b1) ... Setting up libnuma1:amd64 (2.0.18-1) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.22) ... Setting up ocl-icd-libopencl1:amd64 (2.3.2-1+b1) ... Setting up libtiff6:amd64 (4.5.1+git230720-4) ... Setting up libuchardet0:amd64 (0.0.8-1+b1) ... Setting up libnl-3-200:amd64 (3.7.0-0.3) ... Setting up libpsm2-2 (11.2.185-2) ... Setting up openmpi-common (4.1.6-5) ... Setting up libopenjp2-7:amd64 (2.5.0-2+b3) ... Setting up libsub-override-perl (0.10-1) ... Setting up netbase (6.4) ... Setting up libevent-core-2.1-7t64:amd64 (2.1.12-stable-8.1+b3) ... Setting up libpsm-infinipath1 (3.3+20.604758e7-6.3) ... update-alternatives: using /usr/lib/libpsm1/libpsm_infinipath.so.1.16 to provide /usr/lib/x86_64-linux-gnu/libpsm_infinipath.so.1 (libpsm_infinipath.so.1) in auto mode Setting up libssh2-1t64:amd64 (1.11.0-4.1+b2) ... Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... Setting up libfido2-1:amd64 (1.14.0-1+b2) ... Setting up python-matplotlib-data (3.6.3-1) ... Setting up libwebpmux3:amd64 (1.3.2-0.4+b1) ... Setting up libbsd0:amd64 (0.12.2-1) ... Setting up libdrm-common (2.4.120-2) ... Setting up readline-common (8.2-4) ... Setting up libxml2:amd64 (2.9.14+dfsg-1.3+b3) ... Setting up libsz2:amd64 (1.1.3-1) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.13.1-1) ... Setting up python3.12-minimal (3.12.3-1) ... Setting up libxdmcp6:amd64 (1:1.1.2-3+b1) ... Setting up liblapack3:amd64 (3.12.0-3) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode Setting up libxcb1:amd64 (1.15-1) ... Setting up gettext (0.21-14+b1) ... Setting up libtool (2.4.7-7) ... Setting up libevent-pthreads-2.1-7t64:amd64 (2.1.12-stable-8.1+b3) ... Setting up fontconfig-config (2.15.0-1.1) ... Setting up libwebpdemux2:amd64 (1.3.2-0.4+b1) ... Setting up libedit2:amd64 (3.1-20230828-1+b1) ... Setting up libldap-2.5-0:amd64 (2.5.13+dfsg-5+b3) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up libnl-route-3-200:amd64 (3.7.0-0.3) ... Setting up dh-autoreconf (20) ... Setting up libjs-jquery-ui (1.13.2+dfsg-1) ... Setting up libllvm17t64:amd64 (1:17.0.6-11) ... Setting up libfreetype6:amd64 (2.13.2+dfsg-1+b4) ... Setting up libreadline8t64:amd64 (8.2-4) ... Setting up dh-strip-nondeterminism (1.13.1-1) ... Setting up libdrm2:amd64 (2.4.120-2) ... Setting up groff-base (1.23.0-3+b1) ... Setting up libxslt1.1:amd64 (1.1.35-1+b1) ... Setting up libx11-6:amd64 (2:1.8.7-1+b1) ... Setting up libharfbuzz0b:amd64 (8.3.0-2+b1) ... Setting up libamd-comgr2:amd64 (6.0+git20231212.4510c28+dfsg-3+b1) ... Setting up libfontconfig1:amd64 (2.15.0-1.1) ... Setting up liblbfgsb0:amd64 (3.0+dfsg.4-1+b1) ... Setting up libdrm-amdgpu1:amd64 (2.4.120-2) ... Setting up libibverbs1:amd64 (50.0-2+b1) ... Setting up libpython3.12-stdlib:amd64 (3.12.3-1) ... Setting up libxrender1:amd64 (1:0.9.10-1.1+b1) ... Setting up libcurl4t64:amd64 (8.7.1-3) ... Setting up ibverbs-providers:amd64 (50.0-2+b1) ... Setting up openssh-client (1:9.6p1-4) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libpython3.11-stdlib:amd64 (3.11.9-1) ... Setting up python3.12 (3.12.3-1) ... Setting up libxext6:amd64 (2:1.3.4-1+b1) ... Setting up man-db (2.12.0-3) ... Not building database; man-db/auto-update is not 'true'. Setting up libxnvctrl0:amd64 (535.171.04-1) ... Setting up libraqm0:amd64 (0.10.1-1+b1) ... Setting up librdmacm1t64:amd64 (50.0-2+b1) ... Setting up libxss1:amd64 (1:1.2.3-1+b1) ... Setting up libhsakmt1:amd64 (5.7.0-1) ... Setting up libpython3-stdlib:amd64 (3.11.8-1) ... Setting up libfabric1:amd64 (1.17.0-3+b1) ... Setting up python3.11 (3.11.9-1) ... Setting up libxft2:amd64 (2.3.6-1+b1) ... Setting up libtk8.6:amd64 (8.6.14-1) ... Setting up debhelper (13.15.3) ... Setting up python3 (3.11.8-1) ... Setting up libhwloc-plugins:amd64 (2.10.0-1+b1) ... Setting up python3-tz (2024.1-2) ... Setting up python3-six (1.16.0-6) ... Setting up python3-pil:amd64 (10.3.0-2) ... Setting up python3-decorator (5.1.1-5) ... Setting up python3-packaging (24.0-1) ... Setting up python3-pyparsing (3.1.2-1) ... Setting up python3-brotli (1.1.0-2+b3) ... Setting up python3-cycler (0.12.1-1) ... Setting up python3-kiwisolver (1.4.5-1) ... Setting up python3-lxml:amd64 (5.1.0-1) ... Setting up libhsa-runtime64-1 (5.7.1-2) ... Setting up python3-munkres (1.1.4-3) ... Setting up python3-dateutil (2.9.0-2) ... Setting up python3-mpmath (1.3.0-1) ... Setting up python3-lib2to3 (3.12.3-1) ... Setting up python3-appdirs (1.4.4-4) ... Setting up python3-pkg-resources (68.1.2-2) ... Setting up python3-distutils (3.12.3-1) ... python3.12: can't get files for byte-compilation Setting up python3-sympy (1.12-7) ... Setting up python3-attr (23.2.0-2) ... Setting up tk8.6-blt2.5 (2.5.3+dfsg-7) ... Setting up python3-setuptools (68.1.2-2) ... Setting up libpmix2:amd64 (5.0.1-4+b1) ... Setting up python3-lz4 (4.0.2+dfsg-1+b3) ... Setting up blt (2.5.3+dfsg-7) ... Setting up python3-all (3.11.8-1) ... Setting up python3-tk:amd64 (3.12.3-1) ... Setting up python3-fs (2.4.16-4) ... Setting up libamdhip64-5 (5.7.1-3) ... Setting up python3-pil.imagetk:amd64 (10.3.0-2) ... Setting up python3-numpy (1:1.24.2-2) ... Setting up python3-contourpy (1.0.7-3) ... Setting up dh-python (6.20240422) ... Setting up libucx0:amd64 (1.16.0+ds-5) ... Setting up python3-scipy (1.11.4-6) ... Setting up libopenmpi3:amd64 (4.1.6-5) ... Setting up python3-pandas-lib:amd64 (2.1.4+dfsg-5) ... Setting up python3-pandas (2.1.4+dfsg-5) ... Setting up openmpi-bin (4.1.6-5) ... update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode Setting up libhdf5-openmpi-103-1:amd64 (1.10.10+repack-3+b1) ... Setting up mpi-default-bin (1.15) ... Setting up python3-mpi4py (3.1.5-5) ... Setting up libhdf5-openmpi-hl-100:amd64 (1.10.10+repack-3+b1) ... Setting up python3-h5py-mpi (3.10.0-1) ... Setting up python3-h5py (3.10.0-1) ... Setting up python3-fonttools (4.46.0-1) ... Setting up python3-ufolib2 (0.16.0+dfsg1-1) ... Setting up python3-matplotlib (3.6.3-1+b2) ... Setting up python3-seaborn (0.13.2-3) ... Processing triggers for libc-bin (2.37-18) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/poretools-0.6.0+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../poretools_0.6.0+dfsg-6_source.changes dpkg-buildpackage: info: source package poretools dpkg-buildpackage: info: source version 0.6.0+dfsg-6 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Nilesh Patra dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean --with python3 --buildsystem=pybuild dh_auto_clean -O--buildsystem=pybuild I: pybuild base:311: python3.12 setup.py clean 0.6.0 running clean removing '/build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.12/build' (and everything under it) 'build/bdist.linux-x86_64' does not exist -- can't clean it 'build/scripts-3.12' does not exist -- can't clean it I: pybuild base:311: python3.11 setup.py clean 0.6.0 running clean removing '/build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.11/build' (and everything under it) 'build/bdist.linux-x86_64' does not exist -- can't clean it 'build/scripts-3.11' does not exist -- can't clean it dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild debian/rules binary dh binary --with python3 --buildsystem=pybuild dh_update_autotools_config -O--buildsystem=pybuild dh_autoreconf -O--buildsystem=pybuild dh_auto_configure -O--buildsystem=pybuild I: pybuild base:311: python3.12 setup.py config 0.6.0 running config I: pybuild base:311: python3.11 setup.py config 0.6.0 running config dh_auto_build -O--buildsystem=pybuild I: pybuild base:311: /usr/bin/python3.12 setup.py build 0.6.0 running build running build_py creating /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.12/build/poretools copying poretools/__init__.py -> /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.12/build/poretools copying poretools/stats.py -> /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.12/build/poretools copying poretools/hist.py -> /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.12/build/poretools copying poretools/nucdist.py -> /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.12/build/poretools copying poretools/occupancy.py -> /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.12/build/poretools copying poretools/Event.py -> /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.12/build/poretools copying poretools/combine.py -> /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.12/build/poretools copying poretools/times.py -> /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.12/build/poretools copying poretools/Fast5File.py -> /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.12/build/poretools copying poretools/readstats.py -> /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.12/build/poretools copying poretools/yield_plot.py -> /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.12/build/poretools copying poretools/statistics.py -> /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.12/build/poretools copying poretools/formats.py -> /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.12/build/poretools copying poretools/qual_v_pos.py -> /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.12/build/poretools copying poretools/index.py -> /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.12/build/poretools copying poretools/version.py -> /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.12/build/poretools copying poretools/squiggle.py -> /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.12/build/poretools copying poretools/organise.py -> /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.12/build/poretools copying poretools/winner.py -> /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.12/build/poretools copying poretools/tabular.py -> /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.12/build/poretools copying poretools/metadata.py -> /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.12/build/poretools copying poretools/fastq.py -> /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.12/build/poretools copying poretools/fasta.py -> /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.12/build/poretools copying poretools/qualdist.py -> /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.12/build/poretools copying poretools/events.py -> /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.12/build/poretools copying poretools/poretools_main.py -> /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.12/build/poretools creating /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.12/build/poretools/scripts copying poretools/scripts/__init__.py -> /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.12/build/poretools/scripts copying poretools/scripts/poretools-script.py -> /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.12/build/poretools/scripts running egg_info creating poretools.egg-info writing poretools.egg-info/PKG-INFO writing dependency_links to poretools.egg-info/dependency_links.txt writing entry points to poretools.egg-info/entry_points.txt writing requirements to poretools.egg-info/requires.txt writing top-level names to poretools.egg-info/top_level.txt writing manifest file 'poretools.egg-info/SOURCES.txt' reading manifest file 'poretools.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' writing manifest file 'poretools.egg-info/SOURCES.txt' I: pybuild base:311: /usr/bin/python3 setup.py build 0.6.0 running build running build_py creating /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.11/build/poretools copying poretools/__init__.py -> /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.11/build/poretools copying poretools/stats.py -> /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.11/build/poretools copying poretools/hist.py -> /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.11/build/poretools copying poretools/nucdist.py -> /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.11/build/poretools copying poretools/occupancy.py -> /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.11/build/poretools copying poretools/Event.py -> /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.11/build/poretools copying poretools/combine.py -> /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.11/build/poretools copying poretools/times.py -> /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.11/build/poretools copying poretools/Fast5File.py -> /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.11/build/poretools copying poretools/readstats.py -> /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.11/build/poretools copying poretools/yield_plot.py -> /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.11/build/poretools copying poretools/statistics.py -> /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.11/build/poretools copying poretools/formats.py -> /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.11/build/poretools copying poretools/qual_v_pos.py -> /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.11/build/poretools copying poretools/index.py -> /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.11/build/poretools copying poretools/version.py -> /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.11/build/poretools copying poretools/squiggle.py -> /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.11/build/poretools copying poretools/organise.py -> /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.11/build/poretools copying poretools/winner.py -> /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.11/build/poretools copying poretools/tabular.py -> /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.11/build/poretools copying poretools/metadata.py -> /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.11/build/poretools copying poretools/fastq.py -> /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.11/build/poretools copying poretools/fasta.py -> /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.11/build/poretools copying poretools/qualdist.py -> /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.11/build/poretools copying poretools/events.py -> /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.11/build/poretools copying poretools/poretools_main.py -> /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.11/build/poretools creating /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.11/build/poretools/scripts copying poretools/scripts/__init__.py -> /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.11/build/poretools/scripts copying poretools/scripts/poretools-script.py -> /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.11/build/poretools/scripts running egg_info writing poretools.egg-info/PKG-INFO writing dependency_links to poretools.egg-info/dependency_links.txt writing entry points to poretools.egg-info/entry_points.txt writing requirements to poretools.egg-info/requires.txt writing top-level names to poretools.egg-info/top_level.txt reading manifest file 'poretools.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' writing manifest file 'poretools.egg-info/SOURCES.txt' dh_auto_test -O--buildsystem=pybuild I: pybuild base:311: cd /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.12/build; python3.12 -m unittest discover -v ---------------------------------------------------------------------- Ran 0 tests in 0.000s NO TESTS RAN I: pybuild base:311: cd /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.11/build; python3.11 -m unittest discover -v ---------------------------------------------------------------------- Ran 0 tests in 0.000s OK create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=pybuild dh_prep -O--buildsystem=pybuild dh_auto_install -O--buildsystem=pybuild I: pybuild base:311: /usr/bin/python3.12 setup.py install --root /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools 0.6.0 running install /usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. !! ******************************************************************************** Please avoid running ``setup.py`` directly. Instead, use pypa/build, pypa/installer or other standards-based tools. See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. ******************************************************************************** !! self.initialize_options() running build running build_py running egg_info writing poretools.egg-info/PKG-INFO writing dependency_links to poretools.egg-info/dependency_links.txt writing entry points to poretools.egg-info/entry_points.txt writing requirements to poretools.egg-info/requires.txt writing top-level names to poretools.egg-info/top_level.txt reading manifest file 'poretools.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' writing manifest file 'poretools.egg-info/SOURCES.txt' running install_lib creating /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools creating /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr creating /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib creating /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.12 creating /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.12/dist-packages creating /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.12/dist-packages/poretools copying /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.12/build/poretools/__init__.py -> /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.12/dist-packages/poretools copying /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.12/build/poretools/stats.py -> /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.12/dist-packages/poretools copying /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.12/build/poretools/hist.py -> /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.12/dist-packages/poretools copying /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.12/build/poretools/nucdist.py -> /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.12/dist-packages/poretools copying /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.12/build/poretools/occupancy.py -> /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.12/dist-packages/poretools copying /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.12/build/poretools/Event.py -> /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.12/dist-packages/poretools copying /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.12/build/poretools/combine.py -> /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.12/dist-packages/poretools creating /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.12/dist-packages/poretools/scripts copying /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.12/build/poretools/scripts/__init__.py -> /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.12/dist-packages/poretools/scripts copying /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.12/build/poretools/scripts/poretools-script.py -> /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.12/dist-packages/poretools/scripts creating /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.12/dist-packages/poretools/scripts/__pycache__ copying /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.12/build/poretools/scripts/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.12/dist-packages/poretools/scripts/__pycache__ copying /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.12/build/poretools/times.py -> /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.12/dist-packages/poretools copying /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.12/build/poretools/Fast5File.py -> /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.12/dist-packages/poretools copying /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.12/build/poretools/readstats.py -> /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.12/dist-packages/poretools copying /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.12/build/poretools/yield_plot.py -> /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.12/dist-packages/poretools copying /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.12/build/poretools/statistics.py -> /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.12/dist-packages/poretools copying /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.12/build/poretools/formats.py -> /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.12/dist-packages/poretools copying /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.12/build/poretools/qual_v_pos.py -> /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.12/dist-packages/poretools creating /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.12/dist-packages/poretools/__pycache__ copying /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.12/build/poretools/__pycache__/__init__.cpython-312.pyc -> /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.12/dist-packages/poretools/__pycache__ copying /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.12/build/poretools/__pycache__/version.cpython-312.pyc -> /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.12/dist-packages/poretools/__pycache__ copying /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.12/build/poretools/index.py -> /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.12/dist-packages/poretools copying /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.12/build/poretools/version.py -> /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.12/dist-packages/poretools copying /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.12/build/poretools/squiggle.py -> /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.12/dist-packages/poretools copying /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.12/build/poretools/organise.py -> /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.12/dist-packages/poretools copying /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.12/build/poretools/winner.py -> /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.12/dist-packages/poretools copying /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.12/build/poretools/tabular.py -> /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.12/dist-packages/poretools copying /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.12/build/poretools/metadata.py -> /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.12/dist-packages/poretools copying /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.12/build/poretools/fastq.py -> /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.12/dist-packages/poretools copying /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.12/build/poretools/fasta.py -> /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.12/dist-packages/poretools copying /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.12/build/poretools/qualdist.py -> /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.12/dist-packages/poretools copying /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.12/build/poretools/events.py -> /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.12/dist-packages/poretools copying /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.12/build/poretools/poretools_main.py -> /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.12/dist-packages/poretools byte-compiling /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.12/dist-packages/poretools/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.12/dist-packages/poretools/stats.py to stats.cpython-312.pyc byte-compiling /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.12/dist-packages/poretools/hist.py to hist.cpython-312.pyc byte-compiling /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.12/dist-packages/poretools/nucdist.py to nucdist.cpython-312.pyc byte-compiling /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.12/dist-packages/poretools/occupancy.py to occupancy.cpython-312.pyc byte-compiling /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.12/dist-packages/poretools/Event.py to Event.cpython-312.pyc byte-compiling /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.12/dist-packages/poretools/combine.py to combine.cpython-312.pyc byte-compiling /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.12/dist-packages/poretools/scripts/__init__.py to __init__.cpython-312.pyc byte-compiling /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.12/dist-packages/poretools/scripts/poretools-script.py to poretools-script.cpython-312.pyc byte-compiling /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.12/dist-packages/poretools/times.py to times.cpython-312.pyc byte-compiling /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.12/dist-packages/poretools/Fast5File.py to Fast5File.cpython-312.pyc byte-compiling /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.12/dist-packages/poretools/readstats.py to readstats.cpython-312.pyc byte-compiling /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.12/dist-packages/poretools/yield_plot.py to yield_plot.cpython-312.pyc byte-compiling /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.12/dist-packages/poretools/statistics.py to statistics.cpython-312.pyc byte-compiling /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.12/dist-packages/poretools/formats.py to formats.cpython-312.pyc byte-compiling /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.12/dist-packages/poretools/qual_v_pos.py to qual_v_pos.cpython-312.pyc byte-compiling /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.12/dist-packages/poretools/index.py to index.cpython-312.pyc byte-compiling /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.12/dist-packages/poretools/version.py to version.cpython-312.pyc byte-compiling /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.12/dist-packages/poretools/squiggle.py to squiggle.cpython-312.pyc byte-compiling /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.12/dist-packages/poretools/organise.py to organise.cpython-312.pyc byte-compiling /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.12/dist-packages/poretools/winner.py to winner.cpython-312.pyc byte-compiling /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.12/dist-packages/poretools/tabular.py to tabular.cpython-312.pyc byte-compiling /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.12/dist-packages/poretools/metadata.py to metadata.cpython-312.pyc byte-compiling /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.12/dist-packages/poretools/fastq.py to fastq.cpython-312.pyc byte-compiling /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.12/dist-packages/poretools/fasta.py to fasta.cpython-312.pyc byte-compiling /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.12/dist-packages/poretools/qualdist.py to qualdist.cpython-312.pyc byte-compiling /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.12/dist-packages/poretools/events.py to events.cpython-312.pyc byte-compiling /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.12/dist-packages/poretools/poretools_main.py to poretools_main.cpython-312.pyc running install_egg_info Copying poretools.egg-info to /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.12/dist-packages/poretools-0.6.0.egg-info Skipping SOURCES.txt running install_scripts Installing poretools script to /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/bin I: pybuild base:311: /usr/bin/python3 setup.py install --root /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools 0.6.0 running install /usr/lib/python3/dist-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. !! ******************************************************************************** Please avoid running ``setup.py`` directly. Instead, use pypa/build, pypa/installer or other standards-based tools. See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details. ******************************************************************************** !! self.initialize_options() running build running build_py running egg_info writing poretools.egg-info/PKG-INFO writing dependency_links to poretools.egg-info/dependency_links.txt writing entry points to poretools.egg-info/entry_points.txt writing requirements to poretools.egg-info/requires.txt writing top-level names to poretools.egg-info/top_level.txt reading manifest file 'poretools.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' writing manifest file 'poretools.egg-info/SOURCES.txt' running install_lib creating /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.11 creating /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.11/dist-packages creating /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.11/dist-packages/poretools copying /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.11/build/poretools/__init__.py -> /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.11/dist-packages/poretools copying /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.11/build/poretools/stats.py -> /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.11/dist-packages/poretools copying /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.11/build/poretools/hist.py -> /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.11/dist-packages/poretools copying /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.11/build/poretools/nucdist.py -> /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.11/dist-packages/poretools copying /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.11/build/poretools/occupancy.py -> /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.11/dist-packages/poretools copying /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.11/build/poretools/Event.py -> /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.11/dist-packages/poretools copying /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.11/build/poretools/combine.py -> /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.11/dist-packages/poretools creating /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.11/dist-packages/poretools/scripts copying /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.11/build/poretools/scripts/__init__.py -> /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.11/dist-packages/poretools/scripts copying /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.11/build/poretools/scripts/poretools-script.py -> /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.11/dist-packages/poretools/scripts creating /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.11/dist-packages/poretools/scripts/__pycache__ copying /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.11/build/poretools/scripts/__pycache__/__init__.cpython-311.pyc -> /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.11/dist-packages/poretools/scripts/__pycache__ copying /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.11/build/poretools/times.py -> /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.11/dist-packages/poretools copying /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.11/build/poretools/Fast5File.py -> /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.11/dist-packages/poretools copying /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.11/build/poretools/readstats.py -> /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.11/dist-packages/poretools copying /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.11/build/poretools/yield_plot.py -> /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.11/dist-packages/poretools copying /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.11/build/poretools/statistics.py -> /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.11/dist-packages/poretools copying /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.11/build/poretools/formats.py -> /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.11/dist-packages/poretools copying /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.11/build/poretools/qual_v_pos.py -> /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.11/dist-packages/poretools creating /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.11/dist-packages/poretools/__pycache__ copying /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.11/build/poretools/__pycache__/__init__.cpython-311.pyc -> /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.11/dist-packages/poretools/__pycache__ copying /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.11/build/poretools/__pycache__/version.cpython-311.pyc -> /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.11/dist-packages/poretools/__pycache__ copying /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.11/build/poretools/index.py -> /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.11/dist-packages/poretools copying /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.11/build/poretools/version.py -> /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.11/dist-packages/poretools copying /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.11/build/poretools/squiggle.py -> /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.11/dist-packages/poretools copying /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.11/build/poretools/organise.py -> /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.11/dist-packages/poretools copying /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.11/build/poretools/winner.py -> /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.11/dist-packages/poretools copying /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.11/build/poretools/tabular.py -> /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.11/dist-packages/poretools copying /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.11/build/poretools/metadata.py -> /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.11/dist-packages/poretools copying /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.11/build/poretools/fastq.py -> /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.11/dist-packages/poretools copying /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.11/build/poretools/fasta.py -> /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.11/dist-packages/poretools copying /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.11/build/poretools/qualdist.py -> /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.11/dist-packages/poretools copying /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.11/build/poretools/events.py -> /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.11/dist-packages/poretools copying /build/reproducible-path/poretools-0.6.0+dfsg/.pybuild/cpython3_3.11/build/poretools/poretools_main.py -> /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.11/dist-packages/poretools byte-compiling /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.11/dist-packages/poretools/__init__.py to __init__.cpython-311.pyc byte-compiling /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.11/dist-packages/poretools/stats.py to stats.cpython-311.pyc byte-compiling /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.11/dist-packages/poretools/hist.py to hist.cpython-311.pyc byte-compiling /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.11/dist-packages/poretools/nucdist.py to nucdist.cpython-311.pyc byte-compiling /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.11/dist-packages/poretools/occupancy.py to occupancy.cpython-311.pyc byte-compiling /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.11/dist-packages/poretools/Event.py to Event.cpython-311.pyc byte-compiling /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.11/dist-packages/poretools/combine.py to combine.cpython-311.pyc byte-compiling /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.11/dist-packages/poretools/scripts/__init__.py to __init__.cpython-311.pyc byte-compiling /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.11/dist-packages/poretools/scripts/poretools-script.py to poretools-script.cpython-311.pyc byte-compiling /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.11/dist-packages/poretools/times.py to times.cpython-311.pyc byte-compiling /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.11/dist-packages/poretools/Fast5File.py to Fast5File.cpython-311.pyc byte-compiling /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.11/dist-packages/poretools/readstats.py to readstats.cpython-311.pyc byte-compiling /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.11/dist-packages/poretools/yield_plot.py to yield_plot.cpython-311.pyc byte-compiling /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.11/dist-packages/poretools/statistics.py to statistics.cpython-311.pyc byte-compiling /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.11/dist-packages/poretools/formats.py to formats.cpython-311.pyc byte-compiling /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.11/dist-packages/poretools/qual_v_pos.py to qual_v_pos.cpython-311.pyc byte-compiling /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.11/dist-packages/poretools/index.py to index.cpython-311.pyc byte-compiling /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.11/dist-packages/poretools/version.py to version.cpython-311.pyc byte-compiling /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.11/dist-packages/poretools/squiggle.py to squiggle.cpython-311.pyc byte-compiling /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.11/dist-packages/poretools/organise.py to organise.cpython-311.pyc byte-compiling /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.11/dist-packages/poretools/winner.py to winner.cpython-311.pyc byte-compiling /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.11/dist-packages/poretools/tabular.py to tabular.cpython-311.pyc byte-compiling /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.11/dist-packages/poretools/metadata.py to metadata.cpython-311.pyc byte-compiling /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.11/dist-packages/poretools/fastq.py to fastq.cpython-311.pyc byte-compiling /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.11/dist-packages/poretools/fasta.py to fasta.cpython-311.pyc byte-compiling /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.11/dist-packages/poretools/qualdist.py to qualdist.cpython-311.pyc byte-compiling /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.11/dist-packages/poretools/events.py to events.cpython-311.pyc byte-compiling /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.11/dist-packages/poretools/poretools_main.py to poretools_main.cpython-311.pyc running install_egg_info Copying poretools.egg-info to /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/lib/python3.11/dist-packages/poretools-0.6.0.egg-info Skipping SOURCES.txt running install_scripts Installing poretools script to /build/reproducible-path/poretools-0.6.0+dfsg/debian/poretools/usr/bin dh_install -O--buildsystem=pybuild dh_installdocs -O--buildsystem=pybuild dh_installchangelogs -O--buildsystem=pybuild dh_installman -O--buildsystem=pybuild dh_python3 -O--buildsystem=pybuild I: dh_python3 pydist:302: Cannot find package that provides python. Please add package that provides it to Build-Depends or add "python python3-python" line to debian/py3dist-overrides or add proper dependency to Depends by hand and ignore this info. dh_installsystemduser -O--buildsystem=pybuild dh_perl -O--buildsystem=pybuild dh_link -O--buildsystem=pybuild dh_strip_nondeterminism -O--buildsystem=pybuild dh_compress -O--buildsystem=pybuild dh_fixperms -O--buildsystem=pybuild dh_missing -O--buildsystem=pybuild dh_installdeb -O--buildsystem=pybuild dh_gencontrol -O--buildsystem=pybuild dh_md5sums -O--buildsystem=pybuild dh_builddeb -O--buildsystem=pybuild dpkg-deb: building package 'poretools-data' in '../poretools-data_0.6.0+dfsg-6_all.deb'. dpkg-deb: building package 'poretools' in '../poretools_0.6.0+dfsg-6_all.deb'. dpkg-genbuildinfo --build=binary -O../poretools_0.6.0+dfsg-6_amd64.buildinfo dpkg-genchanges --build=binary -O../poretools_0.6.0+dfsg-6_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/755278 and its subdirectories I: Current time: Wed May 1 06:29:21 -12 2024 I: pbuilder-time-stamp: 1714588161 Wed May 1 18:29:22 UTC 2024 I: 1st build successful. Starting 2nd build on remote node ionos5-amd64.debian.net. Wed May 1 18:29:22 UTC 2024 I: Preparing to do remote build '2' on ionos5-amd64.debian.net. Wed May 1 18:32:10 UTC 2024 I: Deleting $TMPDIR on ionos5-amd64.debian.net. Wed May 1 18:32:11 UTC 2024 I: poretools_0.6.0+dfsg-6_amd64.changes: Format: 1.8 Date: Thu, 29 Dec 2022 13:46:47 +0530 Source: poretools Binary: poretools poretools-data Architecture: all Version: 0.6.0+dfsg-6 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Nilesh Patra Description: poretools - toolkit for nanopore nucleotide sequencing data poretools-data - toolkit for nanopore nucleotide sequencing data -- sample dataset Closes: 1027169 Changes: poretools (0.6.0+dfsg-6) unstable; urgency=medium . * Team Upload. * Add patch to fix FTBFS with new matplotlib 3.6.2 (Closes: #1027169) * Explicitly depend on python3-h5py which somehow does not get picked up by debhelper Checksums-Sha1: 52c7fbdbc196528f14c6cfd85ae1ce8cc0505c3e 45062772 poretools-data_0.6.0+dfsg-6_all.deb 2750812ded16a2f22ca817de1ac1db729e369297 19660 poretools_0.6.0+dfsg-6_all.deb b0680141f440a89cee07b72f31aa3590293c6fe7 10488 poretools_0.6.0+dfsg-6_amd64.buildinfo Checksums-Sha256: d35b2db2efd99dd445e2c3725be201e6cd6cef1b2ef9e6584b13ba10ebe156a6 45062772 poretools-data_0.6.0+dfsg-6_all.deb eb9c2a3097bdd2bf52fca8717cfd33af75f9fc2aea9a8dc9e9d5990dde8c3989 19660 poretools_0.6.0+dfsg-6_all.deb 5ccb6b51a56c53459aafc2d5d02278d143d66d369ac5d8555372e2519745724d 10488 poretools_0.6.0+dfsg-6_amd64.buildinfo Files: c301d3fbfc6c00f8b15cb851ddadefad 45062772 science optional poretools-data_0.6.0+dfsg-6_all.deb 5e988015ad15c62b3c968b55f5eb0439 19660 science optional poretools_0.6.0+dfsg-6_all.deb 936b1c5d9d2b7cdf6dff8e1fbc19fb72 10488 science optional poretools_0.6.0+dfsg-6_amd64.buildinfo Wed May 1 18:32:12 UTC 2024 I: diffoscope 265 will be used to compare the two builds: Running as unit: rb-diffoscope-amd64_5-5704.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.d89gSlYQ/poretools_0.6.0+dfsg-6.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.d89gSlYQ/poretools_0.6.0+dfsg-6.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.d89gSlYQ/poretools_0.6.0+dfsg-6.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.d89gSlYQ/b1/poretools_0.6.0+dfsg-6_amd64.changes /srv/reproducible-results/rbuild-debian/r-b-build.d89gSlYQ/b2/poretools_0.6.0+dfsg-6_amd64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.931s) 0.931s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.536s) 0.536s 12 calls diffoscope.comparators.binary.FilesystemFile ## specialize (total time: 0.000s) 0.000s 1 call specialize Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 1.336s CPU time consumed: 1.328s Wed May 1 18:32:14 UTC 2024 I: diffoscope 265 found no differences in the changes files, and a .buildinfo file also exists. Wed May 1 18:32:14 UTC 2024 I: poretools from trixie built successfully and reproducibly on amd64. Wed May 1 18:32:15 UTC 2024 I: Submitting .buildinfo files to external archives: Wed May 1 18:32:15 UTC 2024 I: Submitting 12K b1/poretools_0.6.0+dfsg-6_amd64.buildinfo.asc Wed May 1 18:32:17 UTC 2024 I: Submitting 12K b2/poretools_0.6.0+dfsg-6_amd64.buildinfo.asc Wed May 1 18:32:19 UTC 2024 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Wed May 1 18:32:19 UTC 2024 I: Done submitting .buildinfo files. Wed May 1 18:32:19 UTC 2024 I: Removing signed poretools_0.6.0+dfsg-6_amd64.buildinfo.asc files: removed './b1/poretools_0.6.0+dfsg-6_amd64.buildinfo.asc' removed './b2/poretools_0.6.0+dfsg-6_amd64.buildinfo.asc'