Wed Jan 1 20:12:31 UTC 2025 I: starting to build minc-tools/trixie/amd64 on jenkins on '2025-01-01 20:12' Wed Jan 1 20:12:31 UTC 2025 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/amd64_37/44638/console.log Wed Jan 1 20:12:31 UTC 2025 I: Downloading source for trixie/minc-tools=2.3.00+dfsg-11 --2025-01-01 20:12:31-- http://deb.debian.org/debian/pool/main/m/minc-tools/minc-tools_2.3.00%2bdfsg-11.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2204 (2.2K) [text/prs.lines.tag] Saving to: ‘minc-tools_2.3.00+dfsg-11.dsc’ 0K .. 100% 215M=0s 2025-01-01 20:12:31 (215 MB/s) - ‘minc-tools_2.3.00+dfsg-11.dsc’ saved [2204/2204] Wed Jan 1 20:12:31 UTC 2025 I: minc-tools_2.3.00+dfsg-11.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: minc-tools Binary: minc-tools Architecture: any Version: 2.3.00+dfsg-11 Maintainer: Debian Med Packaging Team Uploaders: Steve M. Robbins , Andreas Tille Homepage: https://www.bic.mni.mcgill.ca/ServicesSoftware/HomePage Standards-Version: 4.6.1 Vcs-Browser: https://salsa.debian.org/med-team/minc-tools Vcs-Git: https://salsa.debian.org/med-team/minc-tools.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13), cmake, bison, flex, libminc-dev, libnifti2-dev, libnetcdf-dev, zlib1g-dev, texlive-latex-base, libhdf5-dev, debhelper Package-List: minc-tools deb science optional arch=any Checksums-Sha1: d5f2d7d633410b1a1f1d4026adcd2c125a16847f 2885395 minc-tools_2.3.00+dfsg.orig.tar.gz 943af4288f98161ef338019e9d3394784a65d079 14940 minc-tools_2.3.00+dfsg-11.debian.tar.xz Checksums-Sha256: 002b01c54b11305dc7350cc7e553debc4d07d4896b2eee850233d07ecc9989b9 2885395 minc-tools_2.3.00+dfsg.orig.tar.gz 395d6683baebbece13515873b42cbf29007ef4a787e5e23bf7143abce0973517 14940 minc-tools_2.3.00+dfsg-11.debian.tar.xz Files: 629912702e72bce17b78361027105e2b 2885395 minc-tools_2.3.00+dfsg.orig.tar.gz 541792e098222c386920095767db7c0f 14940 minc-tools_2.3.00+dfsg-11.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJDBAEBCgAtFiEEy89k8fa3rclNjyokyeVeL63I9LkFAmdx3U0PHHNtckBkZWJp YW4ub3JnAAoJEMnlXi+tyPS59xQP+QFLyU2/m/92Y/8ScXhEJmPbDZG1eiQrmKqD hN5CIP4i2va6LwO0ZsQF+TKzKHLrYxe988p1rle3XeOnWfbilqjd1h6SIz35GXMA QxYZfVOa28af2wMs05FMUq8zw+iI4+q7XPJoPHefFvduScio2bWFVwbkcsxneNEX urRnSyDd9cv4Zr4GZZAv8boQq0cu6TMtdVBk3ZoEKNyhZerR6bBiykkPCpe/lC7L tkqxhu23+dSOh9soJkvIuI9Hs+h9l1atDeJfZ+7VTS5nM3zQfscPLEipL3iKnskd 2G4zv6OlUYln+yAz9czIu/EdxqzfKMgRPRu4XSdT9eSb1sMjkOYYOgYSBJnh9QXl xmbIYNNNEb9dtPVCsozsFVWmj0Y3/mMGtaYYq8ZelF7uvaYECOzG4NcR3KHRZvLJ 7ppxhMtkNWFhasyUjIMgFTGb3YeRy+k+nhXEyltCRdT+SZgh2RKMnKOaBWleV7ur UEaD9x7fLuiqjQOLf1PSptv+zskY97PY4ppaUDl+uSucgfbHWG0qWlcTabs+TYf3 HGopiR8m3GqcZRgMa0xoXOkHPeXVCuq1ocCRf5bmPY6UzJLjjEZ6Dly/Ngd4wJMU 3WWI+DM7BRvJX40C36QoekhS6vR0edI2l2ImrIU4l8nPFurSj5AhzXPr7ojndxI+ qqIAk8+q =wVp5 -----END PGP SIGNATURE----- Wed Jan 1 20:12:31 UTC 2025 I: Checking whether the package is not for us Wed Jan 1 20:12:31 UTC 2025 I: Starting 1st build on remote node infom01-amd64.debian.net. Wed Jan 1 20:12:31 UTC 2025 I: Preparing to do remote build '1' on infom01-amd64.debian.net. Wed Jan 1 20:16:44 UTC 2025 I: Deleting $TMPDIR on infom01-amd64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Wed Jan 1 08:12:33 -12 2025 I: pbuilder-time-stamp: 1735762353 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [minc-tools_2.3.00+dfsg-11.dsc] I: copying [./minc-tools_2.3.00+dfsg.orig.tar.gz] I: copying [./minc-tools_2.3.00+dfsg-11.debian.tar.xz] I: Extracting source gpgv: Signature made Sun Dec 29 23:37:49 2024 gpgv: using RSA key CBCF64F1F6B7ADC94D8F2A24C9E55E2FADC8F4B9 gpgv: issuer "smr@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./minc-tools_2.3.00+dfsg-11.dsc: no acceptable signature found dpkg-source: info: extracting minc-tools in minc-tools-2.3.00+dfsg dpkg-source: info: unpacking minc-tools_2.3.00+dfsg.orig.tar.gz dpkg-source: info: unpacking minc-tools_2.3.00+dfsg-11.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying 01_mincedit-sensible-viewer.diff dpkg-source: info: applying build-with-libnifti dpkg-source: info: applying hdf5-1.10-support.patch dpkg-source: info: applying spelling.patch dpkg-source: info: applying fix_manpages.patch dpkg-source: info: applying fix-gcc10-build.patch dpkg-source: info: applying mnc2nii-use-size-t.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/36491/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='amd64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' DISTRIBUTION='trixie' HOME='/root' HOST_ARCH='amd64' IFS=' ' INVOCATION_ID='dd9521b076714c2783273bf2f96eece8' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='36491' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.UyKvaDQT/pbuilderrc_GQcv --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.UyKvaDQT/b1 --logfile b1/build.log minc-tools_2.3.00+dfsg-11.dsc' SUDO_GID='109' SUDO_UID='104' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' I: uname -a Linux infom01-amd64 6.1.0-28-cloud-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.119-1 (2024-11-22) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Nov 22 14:40 /bin -> usr/bin I: user script /srv/workspace/pbuilder/36491/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), cmake, bison, flex, libminc-dev, libnifti2-dev, libnetcdf-dev, zlib1g-dev, texlive-latex-base, libhdf5-dev, debhelper dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19965 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on cmake; however: Package cmake is not installed. pbuilder-satisfydepends-dummy depends on bison; however: Package bison is not installed. pbuilder-satisfydepends-dummy depends on flex; however: Package flex is not installed. pbuilder-satisfydepends-dummy depends on libminc-dev; however: Package libminc-dev is not installed. pbuilder-satisfydepends-dummy depends on libnifti2-dev; however: Package libnifti2-dev is not installed. pbuilder-satisfydepends-dummy depends on libnetcdf-dev; however: Package libnetcdf-dev is not installed. pbuilder-satisfydepends-dummy depends on zlib1g-dev; however: Package zlib1g-dev is not installed. pbuilder-satisfydepends-dummy depends on texlive-latex-base; however: Package texlive-latex-base is not installed. pbuilder-satisfydepends-dummy depends on libhdf5-dev; however: Package libhdf5-dev is not installed. pbuilder-satisfydepends-dummy depends on debhelper; however: Package debhelper is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bison{a} bsdextrautils{a} cmake{a} cmake-data{a} comerr-dev{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} flex{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-dejavu-mono{a} fonts-lmodern{a} gettext{a} gettext-base{a} groff-base{a} hdf5-helpers{a} icu-devtools{a} intltool-debian{a} krb5-multidev{a} libaec-dev{a} libaec0{a} libarchive-zip-perl{a} libarchive13t64{a} libbrotli-dev{a} libbrotli1{a} libcairo2{a} libcom-err2{a} libcurl3t64-gnutls{a} libcurl4-gnutls-dev{a} libcurl4t64{a} libdebhelper-perl{a} libelf1t64{a} libevent-2.1-7t64{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libfontconfig1{a} libfreetype6{a} libgfortran5{a} libglib2.0-0t64{a} libgmp-dev{a} libgmpxx4ldbl{a} libgnutls-dane0t64{a} libgnutls-openssl27t64{a} libgnutls28-dev{a} libgraphite2-3{a} libgssapi-krb5-2{a} libgssrpc4t64{a} libharfbuzz0b{a} libhdf5-310{a} libhdf5-cpp-310{a} libhdf5-dev{a} libhdf5-fortran-310{a} libhdf5-hl-310{a} libhdf5-hl-cpp-310{a} libhdf5-hl-fortran-310{a} libice6{a} libicu-dev{a} libicu72{a} libidn2-dev{a} libjpeg-dev{a} libjpeg62-turbo{a} libjpeg62-turbo-dev{a} libjsoncpp26{a} libk5crypto3{a} libkadm5clnt-mit12{a} libkadm5srv-mit12{a} libkdb5-10t64{a} libkeyutils1{a} libkpathsea6{a} libkrb5-3{a} libkrb5-dev{a} libkrb5support0{a} libldap-2.5-0{a} libldap-dev{a} libmagic-mgc{a} libmagic1t64{a} libminc-dev{a} libminc2-5.3.0t64{a} libmpfi0{a} libnetcdf-dev{a} libnetcdf19t64{a} libnghttp2-14{a} libnghttp2-dev{a} libnghttp3-9{a} libnghttp3-dev{a} libngtcp2-16{a} libngtcp2-crypto-gnutls-dev{a} libngtcp2-crypto-gnutls8{a} libngtcp2-dev{a} libnifti2-2{a} libnifti2-dev{a} libnifticdf-dev{a} libnifticdf2{a} libniftiio-dev{a} libniftiio2t64{a} libp11-kit-dev{a} libpaper-utils{a} libpaper2{a} libpipeline1{a} libpixman-1-0{a} libpkgconf3{a} libpng16-16t64{a} libpotrace0{a} libproc2-0{a} libpsl-dev{a} libpsl5t64{a} libptexenc1{a} librhash1{a} librtmp-dev{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libsm6{a} libssh2-1-dev{a} libssh2-1t64{a} libssl-dev{a} libsynctex2{a} libsz2{a} libtasn1-6-dev{a} libteckit0{a} libtexlua53-5{a} libtool{a} libuchardet0{a} libunbound8{a} libuv1t64{a} libx11-6{a} libx11-data{a} libxau6{a} libxaw7{a} libxcb-render0{a} libxcb-shm0{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxi6{a} libxml2{a} libxml2-dev{a} libxmu6{a} libxpm4{a} libxrender1{a} libxt6t64{a} libznz-dev{a} libznz3{a} libzstd-dev{a} libzzip-0-13t64{a} m4{a} man-db{a} nettle-dev{a} pkgconf{a} pkgconf-bin{a} po-debconf{a} procps{a} sensible-utils{a} t1utils{a} tex-common{a} texlive-base{a} texlive-binaries{a} texlive-latex-base{a} ucf{a} x11-common{a} xdg-utils{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl dvisvgm krb5-locales libarchive-cpio-perl libfile-mimeinfo-perl libfl-dev libglib2.0-data libldap-common libltdl-dev libmail-sendmail-perl libnet-dbus-perl libsasl2-modules libtasn1-doc libx11-protocol-perl linux-sysctl-defaults lmodern lynx psmisc publicsuffix shared-mime-info wget x11-utils x11-xserver-utils xdg-user-dirs 0 packages upgraded, 169 newly installed, 0 to remove and 0 not upgraded. Need to get 117 MB of archives. After unpacking 403 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main amd64 m4 amd64 1.4.19-4 [287 kB] Get: 2 http://deb.debian.org/debian trixie/main amd64 flex amd64 2.6.4-8.2+b3 [423 kB] Get: 3 http://deb.debian.org/debian trixie/main amd64 libproc2-0 amd64 2:4.0.4-6 [64.8 kB] Get: 4 http://deb.debian.org/debian trixie/main amd64 procps amd64 2:4.0.4-6 [879 kB] Get: 5 http://deb.debian.org/debian trixie/main amd64 sensible-utils all 0.0.24 [24.8 kB] Get: 6 http://deb.debian.org/debian trixie/main amd64 libmagic-mgc amd64 1:5.45-3+b1 [314 kB] Get: 7 http://deb.debian.org/debian trixie/main amd64 libmagic1t64 amd64 1:5.45-3+b1 [108 kB] Get: 8 http://deb.debian.org/debian trixie/main amd64 file amd64 1:5.45-3+b1 [43.3 kB] Get: 9 http://deb.debian.org/debian trixie/main amd64 gettext-base amd64 0.22.5-3 [200 kB] Get: 10 http://deb.debian.org/debian trixie/main amd64 libuchardet0 amd64 0.0.8-1+b2 [68.9 kB] Get: 11 http://deb.debian.org/debian trixie/main amd64 groff-base amd64 1.23.0-7 [1185 kB] Get: 12 http://deb.debian.org/debian trixie/main amd64 bsdextrautils amd64 2.40.2-12 [92.0 kB] Get: 13 http://deb.debian.org/debian trixie/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB] Get: 14 http://deb.debian.org/debian trixie/main amd64 man-db amd64 2.13.0-1 [1420 kB] Get: 15 http://deb.debian.org/debian trixie/main amd64 ucf all 3.0046 [41.1 kB] Get: 16 http://deb.debian.org/debian trixie/main amd64 autoconf all 2.72-3 [493 kB] Get: 17 http://deb.debian.org/debian trixie/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get: 18 http://deb.debian.org/debian trixie/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get: 19 http://deb.debian.org/debian trixie/main amd64 autopoint all 0.22.5-3 [723 kB] Get: 20 http://deb.debian.org/debian trixie/main amd64 bison amd64 2:3.8.2+dfsg-1+b2 [1170 kB] Get: 21 http://deb.debian.org/debian trixie/main amd64 cmake-data all 3.30.5-1 [2223 kB] Get: 22 http://deb.debian.org/debian trixie/main amd64 libicu72 amd64 72.1-5+b1 [9423 kB] Get: 23 http://deb.debian.org/debian trixie/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.2+b1 [699 kB] Get: 24 http://deb.debian.org/debian trixie/main amd64 libarchive13t64 amd64 3.7.4-1.1 [349 kB] Get: 25 http://deb.debian.org/debian trixie/main amd64 libbrotli1 amd64 1.1.0-2+b6 [302 kB] Get: 26 http://deb.debian.org/debian trixie/main amd64 libkrb5support0 amd64 1.21.3-3 [32.5 kB] Get: 27 http://deb.debian.org/debian trixie/main amd64 libcom-err2 amd64 1.47.2~rc1-2 [23.8 kB] Get: 28 http://deb.debian.org/debian trixie/main amd64 libk5crypto3 amd64 1.21.3-3 [79.9 kB] Get: 29 http://deb.debian.org/debian trixie/main amd64 libkeyutils1 amd64 1.6.3-4 [9092 B] Get: 30 http://deb.debian.org/debian trixie/main amd64 libkrb5-3 amd64 1.21.3-3 [324 kB] Get: 31 http://deb.debian.org/debian trixie/main amd64 libgssapi-krb5-2 amd64 1.21.3-3 [136 kB] Get: 32 http://deb.debian.org/debian trixie/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg1-8 [19.6 kB] Get: 33 http://deb.debian.org/debian trixie/main amd64 libsasl2-2 amd64 2.1.28+dfsg1-8 [57.3 kB] Get: 34 http://deb.debian.org/debian trixie/main amd64 libldap-2.5-0 amd64 2.5.19+dfsg-1 [187 kB] Get: 35 http://deb.debian.org/debian trixie/main amd64 libnghttp2-14 amd64 1.64.0-1 [75.5 kB] Get: 36 http://deb.debian.org/debian trixie/main amd64 libpsl5t64 amd64 0.21.2-1.1+b1 [57.2 kB] Get: 37 http://deb.debian.org/debian trixie/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b5 [58.8 kB] Get: 38 http://deb.debian.org/debian trixie/main amd64 libssh2-1t64 amd64 1.11.1-1 [245 kB] Get: 39 http://deb.debian.org/debian trixie/main amd64 libcurl4t64 amd64 8.11.1-1 [351 kB] Get: 40 http://deb.debian.org/debian trixie/main amd64 libexpat1 amd64 2.6.4-1 [106 kB] Get: 41 http://deb.debian.org/debian trixie/main amd64 libjsoncpp26 amd64 1.9.6-3 [81.7 kB] Get: 42 http://deb.debian.org/debian trixie/main amd64 librhash1 amd64 1.4.5-1 [132 kB] Get: 43 http://deb.debian.org/debian trixie/main amd64 libuv1t64 amd64 1.48.0-7 [148 kB] Get: 44 http://deb.debian.org/debian trixie/main amd64 cmake amd64 3.30.5-1 [11.4 MB] Get: 45 http://deb.debian.org/debian trixie/main amd64 comerr-dev amd64 2.1-1.47.2~rc1-2 [55.4 kB] Get: 46 http://deb.debian.org/debian trixie/main amd64 libdebhelper-perl all 13.20 [89.7 kB] Get: 47 http://deb.debian.org/debian trixie/main amd64 libtool all 2.4.7-8 [517 kB] Get: 48 http://deb.debian.org/debian trixie/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 49 http://deb.debian.org/debian trixie/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 50 http://deb.debian.org/debian trixie/main amd64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 51 http://deb.debian.org/debian trixie/main amd64 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 52 http://deb.debian.org/debian trixie/main amd64 libelf1t64 amd64 0.192-4 [189 kB] Get: 53 http://deb.debian.org/debian trixie/main amd64 dwz amd64 0.15-1+b1 [110 kB] Get: 54 http://deb.debian.org/debian trixie/main amd64 gettext amd64 0.22.5-3 [1600 kB] Get: 55 http://deb.debian.org/debian trixie/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 56 http://deb.debian.org/debian trixie/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 57 http://deb.debian.org/debian trixie/main amd64 debhelper all 13.20 [915 kB] Get: 58 http://deb.debian.org/debian trixie/main amd64 fonts-dejavu-mono all 2.37-8 [489 kB] Get: 59 http://deb.debian.org/debian trixie/main amd64 fonts-dejavu-core all 2.37-8 [840 kB] Get: 60 http://deb.debian.org/debian trixie/main amd64 fontconfig-config amd64 2.15.0-1.1+b1 [318 kB] Get: 61 http://deb.debian.org/debian trixie/main amd64 fonts-lmodern all 2.005-1 [4540 kB] Get: 62 http://deb.debian.org/debian trixie/main amd64 hdf5-helpers amd64 1.14.5+repack-1 [26.3 kB] Get: 63 http://deb.debian.org/debian trixie/main amd64 icu-devtools amd64 72.1-5+b1 [210 kB] Get: 64 http://deb.debian.org/debian trixie/main amd64 libgssrpc4t64 amd64 1.21.3-3 [59.5 kB] Get: 65 http://deb.debian.org/debian trixie/main amd64 libkadm5clnt-mit12 amd64 1.21.3-3 [41.7 kB] Get: 66 http://deb.debian.org/debian trixie/main amd64 libkdb5-10t64 amd64 1.21.3-3 [42.0 kB] Get: 67 http://deb.debian.org/debian trixie/main amd64 libkadm5srv-mit12 amd64 1.21.3-3 [53.5 kB] Get: 68 http://deb.debian.org/debian trixie/main amd64 krb5-multidev amd64 1.21.3-3 [126 kB] Get: 69 http://deb.debian.org/debian trixie/main amd64 libaec0 amd64 1.1.3-1+b1 [23.8 kB] Get: 70 http://deb.debian.org/debian trixie/main amd64 libsz2 amd64 1.1.3-1+b1 [8080 B] Get: 71 http://deb.debian.org/debian trixie/main amd64 libaec-dev amd64 1.1.3-1+b1 [21.5 kB] Get: 72 http://deb.debian.org/debian trixie/main amd64 libbrotli-dev amd64 1.1.0-2+b6 [316 kB] Get: 73 http://deb.debian.org/debian trixie/main amd64 libpng16-16t64 amd64 1.6.44-3 [280 kB] Get: 74 http://deb.debian.org/debian trixie/main amd64 libfreetype6 amd64 2.13.3+dfsg-1 [452 kB] Get: 75 http://deb.debian.org/debian trixie/main amd64 libfontconfig1 amd64 2.15.0-1.1+b1 [391 kB] Get: 76 http://deb.debian.org/debian trixie/main amd64 libpixman-1-0 amd64 0.44.0-3 [248 kB] Get: 77 http://deb.debian.org/debian trixie/main amd64 libxau6 amd64 1:1.0.11-1 [20.4 kB] Get: 78 http://deb.debian.org/debian trixie/main amd64 libxdmcp6 amd64 1:1.1.5-1 [27.8 kB] Get: 79 http://deb.debian.org/debian trixie/main amd64 libxcb1 amd64 1.17.0-2+b1 [144 kB] Get: 80 http://deb.debian.org/debian trixie/main amd64 libx11-data all 2:1.8.10-2 [337 kB] Get: 81 http://deb.debian.org/debian trixie/main amd64 libx11-6 amd64 2:1.8.10-2 [813 kB] Get: 82 http://deb.debian.org/debian trixie/main amd64 libxcb-render0 amd64 1.17.0-2+b1 [115 kB] Get: 83 http://deb.debian.org/debian trixie/main amd64 libxcb-shm0 amd64 1.17.0-2+b1 [105 kB] Get: 84 http://deb.debian.org/debian trixie/main amd64 libxext6 amd64 2:1.3.4-1+b2 [50.5 kB] Get: 85 http://deb.debian.org/debian trixie/main amd64 libxrender1 amd64 1:0.9.10-1.1+b3 [27.8 kB] Get: 86 http://deb.debian.org/debian trixie/main amd64 libcairo2 amd64 1.18.2-2 [535 kB] Get: 87 http://deb.debian.org/debian trixie/main amd64 libnghttp3-9 amd64 1.6.0-2 [64.8 kB] Get: 88 http://deb.debian.org/debian trixie/main amd64 libngtcp2-16 amd64 1.9.1-1 [119 kB] Get: 89 http://deb.debian.org/debian trixie/main amd64 libngtcp2-crypto-gnutls8 amd64 1.9.1-1 [18.5 kB] Get: 90 http://deb.debian.org/debian trixie/main amd64 libcurl3t64-gnutls amd64 8.11.1-1 [360 kB] Get: 91 http://deb.debian.org/debian trixie/main amd64 libevent-2.1-7t64 amd64 2.1.12-stable-10+b1 [182 kB] Get: 92 http://deb.debian.org/debian trixie/main amd64 libunbound8 amd64 1.22.0-1 [598 kB] Get: 93 http://deb.debian.org/debian trixie/main amd64 libgnutls-dane0t64 amd64 3.8.8-2 [449 kB] Get: 94 http://deb.debian.org/debian trixie/main amd64 libgnutls-openssl27t64 amd64 3.8.8-2 [449 kB] Get: 95 http://deb.debian.org/debian trixie/main amd64 libidn2-dev amd64 2.3.7-2+b1 [123 kB] Get: 96 http://deb.debian.org/debian trixie/main amd64 libp11-kit-dev amd64 0.25.5-3 [208 kB] Get: 97 http://deb.debian.org/debian trixie/main amd64 libtasn1-6-dev amd64 4.19.0-3+b3 [98.9 kB] Get: 98 http://deb.debian.org/debian trixie/main amd64 libgmpxx4ldbl amd64 2:6.3.0+dfsg-3 [329 kB] Get: 99 http://deb.debian.org/debian trixie/main amd64 libgmp-dev amd64 2:6.3.0+dfsg-3 [642 kB] Get: 100 http://deb.debian.org/debian trixie/main amd64 nettle-dev amd64 3.10-1+b1 [1317 kB] Get: 101 http://deb.debian.org/debian trixie/main amd64 libgnutls28-dev amd64 3.8.8-2 [1391 kB] Get: 102 http://deb.debian.org/debian trixie/main amd64 libkrb5-dev amd64 1.21.3-3 [15.7 kB] Get: 103 http://deb.debian.org/debian trixie/main amd64 libldap-dev amd64 2.5.19+dfsg-1 [303 kB] Get: 104 http://deb.debian.org/debian trixie/main amd64 libpkgconf3 amd64 1.8.1-4 [36.4 kB] Get: 105 http://deb.debian.org/debian trixie/main amd64 pkgconf-bin amd64 1.8.1-4 [30.2 kB] Get: 106 http://deb.debian.org/debian trixie/main amd64 pkgconf amd64 1.8.1-4 [26.2 kB] Get: 107 http://deb.debian.org/debian trixie/main amd64 libnghttp2-dev amd64 1.64.0-1 [115 kB] Get: 108 http://deb.debian.org/debian trixie/main amd64 libnghttp3-dev amd64 1.6.0-2 [88.5 kB] Get: 109 http://deb.debian.org/debian trixie/main amd64 libngtcp2-crypto-gnutls-dev amd64 1.9.1-1 [23.1 kB] Get: 110 http://deb.debian.org/debian trixie/main amd64 libngtcp2-dev amd64 1.9.1-1 [167 kB] Get: 111 http://deb.debian.org/debian trixie/main amd64 libpsl-dev amd64 0.21.2-1.1+b1 [77.6 kB] Get: 112 http://deb.debian.org/debian trixie/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1+b1 [920 kB] Get: 113 http://deb.debian.org/debian trixie/main amd64 librtmp-dev amd64 2.4+20151223.gitfa8646d.1-2+b5 [68.0 kB] Get: 114 http://deb.debian.org/debian trixie/main amd64 libssl-dev amd64 3.3.2-2 [2742 kB] Get: 115 http://deb.debian.org/debian trixie/main amd64 libssh2-1-dev amd64 1.11.1-1 [393 kB] Get: 116 http://deb.debian.org/debian trixie/main amd64 libzstd-dev amd64 1.5.6+dfsg-1+b1 [365 kB] Get: 117 http://deb.debian.org/debian trixie/main amd64 libcurl4-gnutls-dev amd64 8.11.1-1 [474 kB] Get: 118 http://deb.debian.org/debian trixie/main amd64 libgfortran5 amd64 14.2.0-8 [836 kB] Get: 119 http://deb.debian.org/debian trixie/main amd64 libglib2.0-0t64 amd64 2.82.4-1 [1501 kB] Get: 120 http://deb.debian.org/debian trixie/main amd64 libgraphite2-3 amd64 1.3.14-2+b1 [75.4 kB] Get: 121 http://deb.debian.org/debian trixie/main amd64 libharfbuzz0b amd64 10.1.0-2 [478 kB] Get: 122 http://deb.debian.org/debian trixie/main amd64 libhdf5-310 amd64 1.14.5+repack-1 [1340 kB] Get: 123 http://deb.debian.org/debian trixie/main amd64 libhdf5-cpp-310 amd64 1.14.5+repack-1 [133 kB] Get: 124 http://deb.debian.org/debian trixie/main amd64 libhdf5-fortran-310 amd64 1.14.5+repack-1 [112 kB] Get: 125 http://deb.debian.org/debian trixie/main amd64 libhdf5-hl-310 amd64 1.14.5+repack-1 [69.0 kB] Get: 126 http://deb.debian.org/debian trixie/main amd64 libhdf5-hl-fortran-310 amd64 1.14.5+repack-1 [43.6 kB] Get: 127 http://deb.debian.org/debian trixie/main amd64 libhdf5-hl-cpp-310 amd64 1.14.5+repack-1 [24.1 kB] Get: 128 http://deb.debian.org/debian trixie/main amd64 libjpeg62-turbo amd64 1:2.1.5-3+b1 [168 kB] Get: 129 http://deb.debian.org/debian trixie/main amd64 libjpeg62-turbo-dev amd64 1:2.1.5-3+b1 [292 kB] Get: 130 http://deb.debian.org/debian trixie/main amd64 libjpeg-dev amd64 1:2.1.5-3+b1 [72.2 kB] Get: 131 http://deb.debian.org/debian trixie/main amd64 libhdf5-dev amd64 1.14.5+repack-1 [3165 kB] Get: 132 http://deb.debian.org/debian trixie/main amd64 x11-common all 1:7.7+23.1 [216 kB] Get: 133 http://deb.debian.org/debian trixie/main amd64 libice6 amd64 2:1.1.1-1 [65.4 kB] Get: 134 http://deb.debian.org/debian trixie/main amd64 libicu-dev amd64 72.1-5+b1 [10.4 MB] Get: 135 http://deb.debian.org/debian trixie/main amd64 libkpathsea6 amd64 2024.20240313.70630+ds-5+b1 [157 kB] Get: 136 http://deb.debian.org/debian trixie/main amd64 libnetcdf19t64 amd64 1:4.9.2-7+b1 [477 kB] Get: 137 http://deb.debian.org/debian trixie/main amd64 libminc2-5.3.0t64 amd64 2.4.06-2.1+b3 [236 kB] Get: 138 http://deb.debian.org/debian trixie/main amd64 libxml2-dev amd64 2.12.7+dfsg+really2.9.14-0.2+b1 [795 kB] Get: 139 http://deb.debian.org/debian trixie/main amd64 libnetcdf-dev amd64 1:4.9.2-7+b1 [104 kB] Get: 140 http://deb.debian.org/debian trixie/main amd64 libminc-dev amd64 2.4.06-2.1+b3 [70.0 kB] Get: 141 http://deb.debian.org/debian trixie/main amd64 libmpfi0 amd64 1.5.4+ds-4 [35.5 kB] Get: 142 http://deb.debian.org/debian trixie/main amd64 libznz3 amd64 3.0.1-9.1+b1 [10.4 kB] Get: 143 http://deb.debian.org/debian trixie/main amd64 libnifti2-2 amd64 3.0.1-9.1+b1 [75.9 kB] Get: 144 http://deb.debian.org/debian trixie/main amd64 libnifticdf2 amd64 3.0.1-9.1+b1 [52.6 kB] Get: 145 http://deb.debian.org/debian trixie/main amd64 libnifticdf-dev amd64 3.0.1-9.1+b1 [58.6 kB] Get: 146 http://deb.debian.org/debian trixie/main amd64 libniftiio2t64 amd64 3.0.1-9.1+b1 [58.8 kB] Get: 147 http://deb.debian.org/debian trixie/main amd64 libniftiio-dev amd64 3.0.1-9.1+b1 [67.9 kB] Get: 148 http://deb.debian.org/debian trixie/main amd64 libznz-dev amd64 3.0.1-9.1+b1 [10.8 kB] Get: 149 http://deb.debian.org/debian trixie/main amd64 libnifti2-dev amd64 3.0.1-9.1+b1 [95.2 kB] Get: 150 http://deb.debian.org/debian trixie/main amd64 libpaper2 amd64 2.2.5-0.3 [16.3 kB] Get: 151 http://deb.debian.org/debian trixie/main amd64 libpaper-utils amd64 2.2.5-0.3 [16.1 kB] Get: 152 http://deb.debian.org/debian trixie/main amd64 libpotrace0 amd64 1.16-2+b2 [25.6 kB] Get: 153 http://deb.debian.org/debian trixie/main amd64 libptexenc1 amd64 2024.20240313.70630+ds-5+b1 [49.4 kB] Get: 154 http://deb.debian.org/debian trixie/main amd64 libsm6 amd64 2:1.2.4-1 [35.2 kB] Get: 155 http://deb.debian.org/debian trixie/main amd64 libsynctex2 amd64 2024.20240313.70630+ds-5+b1 [63.0 kB] Get: 156 http://deb.debian.org/debian trixie/main amd64 libteckit0 amd64 2.5.12+ds1-1+b1 [341 kB] Get: 157 http://deb.debian.org/debian trixie/main amd64 libtexlua53-5 amd64 2024.20240313.70630+ds-5+b1 [115 kB] Get: 158 http://deb.debian.org/debian trixie/main amd64 libxt6t64 amd64 1:1.2.1-1.2+b1 [188 kB] Get: 159 http://deb.debian.org/debian trixie/main amd64 libxmu6 amd64 2:1.1.3-3+b3 [58.8 kB] Get: 160 http://deb.debian.org/debian trixie/main amd64 libxpm4 amd64 1:3.5.17-1+b2 [56.3 kB] Get: 161 http://deb.debian.org/debian trixie/main amd64 libxaw7 amd64 2:1.0.16-1 [212 kB] Get: 162 http://deb.debian.org/debian trixie/main amd64 libxi6 amd64 2:1.8.2-1 [78.9 kB] Get: 163 http://deb.debian.org/debian trixie/main amd64 libzzip-0-13t64 amd64 0.13.72+dfsg.1-1.2+b1 [56.2 kB] Get: 164 http://deb.debian.org/debian trixie/main amd64 t1utils amd64 1.41-4 [62.1 kB] Get: 165 http://deb.debian.org/debian trixie/main amd64 tex-common all 6.18 [32.5 kB] Get: 166 http://deb.debian.org/debian trixie/main amd64 texlive-binaries amd64 2024.20240313.70630+ds-5+b1 [8504 kB] Get: 167 http://deb.debian.org/debian trixie/main amd64 xdg-utils all 1.2.1-2 [75.8 kB] Get: 168 http://deb.debian.org/debian trixie/main amd64 texlive-base all 2024.20241115-1 [22.7 MB] Get: 169 http://deb.debian.org/debian trixie/main amd64 texlive-latex-base all 2024.20241115-1 [1278 kB] Fetched 117 MB in 2s (69.2 MB/s) Preconfiguring packages ... Selecting previously unselected package m4. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19965 files and directories currently installed.) Preparing to unpack .../000-m4_1.4.19-4_amd64.deb ... Unpacking m4 (1.4.19-4) ... Selecting previously unselected package flex. Preparing to unpack .../001-flex_2.6.4-8.2+b3_amd64.deb ... Unpacking flex (2.6.4-8.2+b3) ... Selecting previously unselected package libproc2-0:amd64. Preparing to unpack .../002-libproc2-0_2%3a4.0.4-6_amd64.deb ... Unpacking libproc2-0:amd64 (2:4.0.4-6) ... Selecting previously unselected package procps. Preparing to unpack .../003-procps_2%3a4.0.4-6_amd64.deb ... Unpacking procps (2:4.0.4-6) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../004-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../005-libmagic-mgc_1%3a5.45-3+b1_amd64.deb ... Unpacking libmagic-mgc (1:5.45-3+b1) ... Selecting previously unselected package libmagic1t64:amd64. Preparing to unpack .../006-libmagic1t64_1%3a5.45-3+b1_amd64.deb ... Unpacking libmagic1t64:amd64 (1:5.45-3+b1) ... Selecting previously unselected package file. Preparing to unpack .../007-file_1%3a5.45-3+b1_amd64.deb ... Unpacking file (1:5.45-3+b1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../008-gettext-base_0.22.5-3_amd64.deb ... Unpacking gettext-base (0.22.5-3) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../009-libuchardet0_0.0.8-1+b2_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.8-1+b2) ... Selecting previously unselected package groff-base. Preparing to unpack .../010-groff-base_1.23.0-7_amd64.deb ... Unpacking groff-base (1.23.0-7) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../011-bsdextrautils_2.40.2-12_amd64.deb ... Unpacking bsdextrautils (2.40.2-12) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../012-libpipeline1_1.5.8-1_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../013-man-db_2.13.0-1_amd64.deb ... Unpacking man-db (2.13.0-1) ... Selecting previously unselected package ucf. Preparing to unpack .../014-ucf_3.0046_all.deb ... Moving old data out of the way Unpacking ucf (3.0046) ... Selecting previously unselected package autoconf. Preparing to unpack .../015-autoconf_2.72-3_all.deb ... Unpacking autoconf (2.72-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../016-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../017-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../018-autopoint_0.22.5-3_all.deb ... Unpacking autopoint (0.22.5-3) ... Selecting previously unselected package bison. Preparing to unpack .../019-bison_2%3a3.8.2+dfsg-1+b2_amd64.deb ... Unpacking bison (2:3.8.2+dfsg-1+b2) ... Selecting previously unselected package cmake-data. Preparing to unpack .../020-cmake-data_3.30.5-1_all.deb ... Unpacking cmake-data (3.30.5-1) ... Selecting previously unselected package libicu72:amd64. Preparing to unpack .../021-libicu72_72.1-5+b1_amd64.deb ... Unpacking libicu72:amd64 (72.1-5+b1) ... Selecting previously unselected package libxml2:amd64. Preparing to unpack .../022-libxml2_2.12.7+dfsg+really2.9.14-0.2+b1_amd64.deb ... Unpacking libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.2+b1) ... Selecting previously unselected package libarchive13t64:amd64. Preparing to unpack .../023-libarchive13t64_3.7.4-1.1_amd64.deb ... Unpacking libarchive13t64:amd64 (3.7.4-1.1) ... Selecting previously unselected package libbrotli1:amd64. Preparing to unpack .../024-libbrotli1_1.1.0-2+b6_amd64.deb ... Unpacking libbrotli1:amd64 (1.1.0-2+b6) ... Selecting previously unselected package libkrb5support0:amd64. Preparing to unpack .../025-libkrb5support0_1.21.3-3_amd64.deb ... Unpacking libkrb5support0:amd64 (1.21.3-3) ... Selecting previously unselected package libcom-err2:amd64. Preparing to unpack .../026-libcom-err2_1.47.2~rc1-2_amd64.deb ... Unpacking libcom-err2:amd64 (1.47.2~rc1-2) ... Selecting previously unselected package libk5crypto3:amd64. Preparing to unpack .../027-libk5crypto3_1.21.3-3_amd64.deb ... Unpacking libk5crypto3:amd64 (1.21.3-3) ... Selecting previously unselected package libkeyutils1:amd64. Preparing to unpack .../028-libkeyutils1_1.6.3-4_amd64.deb ... Unpacking libkeyutils1:amd64 (1.6.3-4) ... Selecting previously unselected package libkrb5-3:amd64. Preparing to unpack .../029-libkrb5-3_1.21.3-3_amd64.deb ... Unpacking libkrb5-3:amd64 (1.21.3-3) ... Selecting previously unselected package libgssapi-krb5-2:amd64. Preparing to unpack .../030-libgssapi-krb5-2_1.21.3-3_amd64.deb ... Unpacking libgssapi-krb5-2:amd64 (1.21.3-3) ... Selecting previously unselected package libsasl2-modules-db:amd64. Preparing to unpack .../031-libsasl2-modules-db_2.1.28+dfsg1-8_amd64.deb ... Unpacking libsasl2-modules-db:amd64 (2.1.28+dfsg1-8) ... 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Setting up libhdf5-cpp-310:amd64 (1.14.5+repack-1) ... Setting up libhdf5-hl-310:amd64 (1.14.5+repack-1) ... Setting up libnetcdf19t64:amd64 (1:4.9.2-7+b1) ... Setting up libxmu6:amd64 (2:1.1.3-3+b3) ... Setting up libkdb5-10t64:amd64 (1.21.3-3) ... Setting up debhelper (13.20) ... Setting up libxaw7:amd64 (2:1.0.16-1) ... Setting up texlive-binaries (2024.20240313.70630+ds-5+b1) ... update-alternatives: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin (xdvi.bin) in auto mode update-alternatives: using /usr/bin/bibtex.original to provide /usr/bin/bibtex (bibtex) in auto mode Setting up libkadm5srv-mit12:amd64 (1.21.3-3) ... 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Setting up libhdf5-dev (1.14.5+repack-1) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5-serial.pc to provide /usr/lib/x86_64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode Setting up libnetcdf-dev (1:4.9.2-7+b1) ... Setting up libminc-dev:amd64 (2.4.06-2.1+b3) ... Processing triggers for libc-bin (2.40-4) ... Processing triggers for tex-common (6.18) ... Running updmap-sys. This may take some time... done. Running mktexlsr /var/lib/texmf ... done. Building format(s) --all. This may take some time... done. Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/minc-tools-2.3.00+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../minc-tools_2.3.00+dfsg-11_source.changes dpkg-buildpackage: info: source package minc-tools dpkg-buildpackage: info: source version 2.3.00+dfsg-11 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Steve M. Robbins dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf debian/rules override_dh_auto_configure make[1]: Entering directory '/build/reproducible-path/minc-tools-2.3.00+dfsg' dh_auto_configure -- cd obj-x86_64-linux-gnu && DEB_PYTHON_INSTALL_LAYOUT=deb PKG_CONFIG=/usr/bin/pkg-config cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/x86_64-linux-gnu .. CMake Warning (dev) at CMakeLists.txt:6 (PROJECT): cmake_minimum_required() should be called prior to this top-level project() call. Please see the cmake-commands(7) manual for usage documentation of both commands. This warning is for project developers. Use -Wno-dev to suppress it. -- The C compiler identification is GNU 14.2.0 -- The CXX compiler identification is GNU 14.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done CMake Deprecation Warning at CMakeLists.txt:20 (CMAKE_MINIMUM_REQUIRED): Compatibility with CMake < 3.5 will be removed from a future version of CMake. Update the VERSION argument value or use a ... suffix to tell CMake that the project does not need compatibility with older versions. CMake Deprecation Warning at CMakeLists.txt:24 (CMAKE_POLICY): The OLD behavior for policy CMP0026 will be removed from a future version of CMake. The cmake-policies(7) manual explains that the OLD behaviors of all policies are deprecated and that a policy should be set to OLD only under specific short-term circumstances. Projects should be ported to the NEW behavior and not rely on setting a policy to OLD. -- Looking for mkstemp -- Looking for mkstemp - found -- Looking for tmpnam -- Looking for tmpnam - found -- Looking for tempnam -- Looking for tempnam - found -- Looking for strerror -- Looking for strerror - found -- Looking for popen -- Looking for popen - found -- Looking for fork -- Looking for fork - found -- Looking for vfork -- Looking for vfork - found -- Looking for fdopen -- Looking for fdopen - found -- Looking for strdup -- Looking for strdup - found -- Looking for getpwnam -- Looking for getpwnam - found -- Looking for select -- Looking for select - found -- Looking for sysconf -- Looking for sysconf - found -- Looking for system -- Looking for system - found -- Looking for include file float.h -- Looking for include file float.h - found -- Looking for include file sys/dir.h -- Looking for include file sys/dir.h - found -- Looking for include file sys/ndir.h -- Looking for include file 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file inttypes.h - found -- Looking for include file string.h -- Looking for include file string.h - found -- Looking for include file strings.h -- Looking for include file strings.h - found -- Looking for include file pwd.h -- Looking for include file pwd.h - found -- Found BISON: /usr/bin/bison (found version "3.8.2") -- Found FLEX: /usr/bin/flex (found version "2.6.4") -- Configuring done (7.3s) -- Generating done (0.1s) CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY CMAKE_INSTALL_LIBDIR CMAKE_INSTALL_LOCALSTATEDIR CMAKE_INSTALL_RUNSTATEDIR CMAKE_INSTALL_SYSCONFDIR FETCHCONTENT_FULLY_DISCONNECTED -- Build files have been written to: /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu make[1]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg' dh_auto_build cd obj-x86_64-linux-gnu && make -j12 "INSTALL=install --strip-program=true" VERBOSE=1 make[1]: 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/build/reproducible-path/minc-tools-2.3.00+dfsg/progs /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs/CMakeFiles/mincconvert.dir/DependInfo.cmake "--color=" make -f progs/CMakeFiles/mincexample2.dir/build.make progs/CMakeFiles/mincexample2.dir/depend make[3]: Entering directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/minc-tools-2.3.00+dfsg /build/reproducible-path/minc-tools-2.3.00+dfsg/progs /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs 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/build/reproducible-path/minc-tools-2.3.00+dfsg/progs && /usr/bin/bison -d -o /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs/ncgentab.c /build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincgen/ncgentab.y cd /build/reproducible-path/minc-tools-2.3.00+dfsg/progs && /usr/bin/flex -o/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs/ncgenyy.c /build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincgen/ncgenyy.l make -f progs/CMakeFiles/invert_raw_image.dir/build.make progs/CMakeFiles/invert_raw_image.dir/build make[3]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/minc-tools-2.3.00+dfsg/progs && /usr/bin/flex -o/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs/lex.c /build/reproducible-path/minc-tools-2.3.00+dfsg/progs/minccalc/lex.l make[3]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' [ 3%] [BISON][gram] Building parser with bison 3.8.2 make[3]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' make -f progs/CMakeFiles/mincdump.dir/build.make progs/CMakeFiles/mincdump.dir/build make[3]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' make -f progs/CMakeFiles/mincaverage.dir/build.make progs/CMakeFiles/mincaverage.dir/build make -f progs/CMakeFiles/mincconvert.dir/build.make progs/CMakeFiles/mincconvert.dir/build make -f progs/CMakeFiles/mincexample2.dir/build.make progs/CMakeFiles/mincexample2.dir/build make[3]: Entering directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' /build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincgen/ncgentab.ymake -f progs/CMakeFiles/minccopy.dir/build.make progs/CMakeFiles/minccopy.dir/build : warning: 1 shift/reduce conflict [-Wconflicts-sr] /build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincgen/ncgentab.y: note: rerun with option '-Wcounterexamples' to generate conflict counterexamples cd /build/reproducible-path/minc-tools-2.3.00+dfsg/progs && /usr/bin/bison --debug -d -o /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs/gram.c /build/reproducible-path/minc-tools-2.3.00+dfsg/progs/minccalc/gram.y make -f progs/CMakeFiles/mincexample1.dir/build.make progs/CMakeFiles/mincexample1.dir/build 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progs/CMakeFiles/mincconvert.dir/mincconvert/mincconvert.c.o cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/invert_raw_image.dir/mincview/invert_raw_image.c.o -MF CMakeFiles/invert_raw_image.dir/mincview/invert_raw_image.c.o.d -o CMakeFiles/invert_raw_image.dir/mincview/invert_raw_image.c.o -c /build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincview/invert_raw_image.c [ 6%] Building C object progs/CMakeFiles/minccopy.dir/minccopy/minccopy.c.o [ 8%] Building C object progs/CMakeFiles/mincexample2.dir/mincexample/mincexample2.c.o [ 8%] Building C object progs/CMakeFiles/mincaverage.dir/mincaverage/mincaverage.c.o cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/mincconvert.dir/mincconvert/mincconvert.c.o -MF CMakeFiles/mincconvert.dir/mincconvert/mincconvert.c.o.d -o CMakeFiles/mincconvert.dir/mincconvert/mincconvert.c.o -c /build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincconvert/mincconvert.c cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/minccopy.dir/minccopy/minccopy.c.o -MF CMakeFiles/minccopy.dir/minccopy/minccopy.c.o.d -o CMakeFiles/minccopy.dir/minccopy/minccopy.c.o -c /build/reproducible-path/minc-tools-2.3.00+dfsg/progs/minccopy/minccopy.c cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs 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Entering directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/minc-tools-2.3.00+dfsg /build/reproducible-path/minc-tools-2.3.00+dfsg/progs /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs/CMakeFiles/minclookup.dir/DependInfo.cmake "--color=" cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs 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-I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/mincdump.dir/mincdump/dumplib.c.o -MF CMakeFiles/mincdump.dir/mincdump/dumplib.c.o.d -o CMakeFiles/mincdump.dir/mincdump/dumplib.c.o -c /build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincdump/dumplib.c cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/mincinfo.dir/mincinfo/mincinfo.c.o -MF CMakeFiles/mincinfo.dir/mincinfo/mincinfo.c.o.d -o CMakeFiles/mincinfo.dir/mincinfo/mincinfo.c.o -c /build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincinfo/mincinfo.c [ 22%] Linking C executable mincconcat cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cmake -E cmake_link_script CMakeFiles/mincconcat.dir/link.txt --verbose=1 [ 22%] Building C object progs/CMakeFiles/minclookup.dir/minclookup/minclookup.c.o cd 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'/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' /usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -rdynamic CMakeFiles/mincaverage.dir/mincaverage/mincaverage.c.o -o mincaverage -L/usr/lib/x86_64-linux-gnu/lib -Wl,-rpath,/usr/lib/x86_64-linux-gnu/lib: -lminc2 -lm -lz -lm -ldl -lnetcdf -lm -ldl -lnetcdf make[3]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' [ 23%] Built target mincexample2 make -f progs/CMakeFiles/mincmakescalar.dir/build.make progs/CMakeFiles/mincmakescalar.dir/depend [ 23%] Built target mincexpand make[3]: Entering directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' cd 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'/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' make -f progs/CMakeFiles/mincmakescalar.dir/build.make progs/CMakeFiles/mincmakescalar.dir/build make[3]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' make -f progs/CMakeFiles/mincmakevector.dir/build.make progs/CMakeFiles/mincmakevector.dir/build make[3]: Entering directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' make -f progs/CMakeFiles/mincmath.dir/build.make progs/CMakeFiles/mincmath.dir/build make[3]: Entering directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' [ 24%] Linking C executable mincdump cd 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-I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/minc_modify_header.dir/minc_modify_header/minc_modify_header.c.o -MF CMakeFiles/minc_modify_header.dir/minc_modify_header/minc_modify_header.c.o.d -o CMakeFiles/minc_modify_header.dir/minc_modify_header/minc_modify_header.c.o -c /build/reproducible-path/minc-tools-2.3.00+dfsg/progs/minc_modify_header/minc_modify_header.c make[3]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' [ 28%] Linking C executable mincinfo cd 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-I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/mincgen.dir/ncgenyy.c.o -MF CMakeFiles/mincgen.dir/ncgenyy.c.o.d -o CMakeFiles/mincgen.dir/ncgenyy.c.o -c /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs/ncgenyy.c [ 29%] Building C object progs/CMakeFiles/mincextract.dir/Proglib/minc_endian.c.o cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && 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'/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/minc-tools-2.3.00+dfsg /build/reproducible-path/minc-tools-2.3.00+dfsg/progs /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs/CMakeFiles/mincreshape.dir/DependInfo.cmake "--color=" make -f progs/CMakeFiles/mincstats.dir/build.make progs/CMakeFiles/mincstats.dir/depend make[3]: Entering directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' [ 30%] Linking C executable mincmakevector cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/minc-tools-2.3.00+dfsg 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'/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' [ 31%] Linking C executable mincextract cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cmake -E cmake_link_script CMakeFiles/mincextract.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' make -f progs/CMakeFiles/mincstats.dir/build.make progs/CMakeFiles/mincstats.dir/build /usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -rdynamic CMakeFiles/mincmakevector.dir/mincmakevector/mincmakevector.c.o -o mincmakevector -L/usr/lib/x86_64-linux-gnu/lib -Wl,-rpath,/usr/lib/x86_64-linux-gnu/lib: -lminc2 -lm -lz -lm 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-D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -rdynamic CMakeFiles/mincextract.dir/mincextract/mincextract.c.o CMakeFiles/mincextract.dir/Proglib/minc_endian.c.o -o mincextract -L/usr/lib/x86_64-linux-gnu/lib -Wl,-rpath,/usr/lib/x86_64-linux-gnu/lib: -lminc2 -lm -lz -lm -ldl -lnetcdf [ 35%] Linking C executable mincmakescalar [ 36%] Building C object progs/CMakeFiles/mincstats.dir/mincstats/mincstats.c.o cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cmake -E cmake_link_script CMakeFiles/mincmakescalar.dir/link.txt --verbose=1 cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/Proglib 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-I/usr/include/hdf5/serial -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -rdynamic CMakeFiles/minclookup.dir/minclookup/minclookup.c.o -o minclookup -L/usr/lib/x86_64-linux-gnu/lib -Wl,-rpath,/usr/lib/x86_64-linux-gnu/lib: -lminc2 -lm -lz -lm -ldl -lnetcdf -lm -ldl -lnetcdf /usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -rdynamic CMakeFiles/mincmakescalar.dir/mincmakescalar/mincmakescalar.c.o -o mincmakescalar -L/usr/lib/x86_64-linux-gnu/lib -Wl,-rpath,/usr/lib/x86_64-linux-gnu/lib: -lminc2 -lm -lz -lm -ldl -lnetcdf -lm -ldl -lnetcdf make[3]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' [ 36%] Linking C executable minc_modify_header cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cmake -E cmake_link_script CMakeFiles/minc_modify_header.dir/link.txt --verbose=1 [ 37%] Linking C executable mincmath cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cmake -E cmake_link_script CMakeFiles/mincmath.dir/link.txt --verbose=1 [ 38%] Building C object progs/CMakeFiles/minccalc.dir/minccalc/ident.c.o cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/minccalc.dir/minccalc/ident.c.o -MF CMakeFiles/minccalc.dir/minccalc/ident.c.o.d -o CMakeFiles/minccalc.dir/minccalc/ident.c.o -c /build/reproducible-path/minc-tools-2.3.00+dfsg/progs/minccalc/ident.c /usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -rdynamic CMakeFiles/minc_modify_header.dir/minc_modify_header/minc_modify_header.c.o -o minc_modify_header -L/usr/lib/x86_64-linux-gnu/lib 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target mincinfo [ 38%] Built target minclookup /build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincresample/mincresample.c: In function 'create_output_file.constprop': make -f progs/CMakeFiles/minctoraw.dir/build.make progs/CMakeFiles/minctoraw.dir/depend /build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincresample/mincresample.c:1454:39: warning: '%d' directive writing between 1 and 10 bytes into a region of size between 1 and 256 [-Wformat-overflow=] 1454 | (void) sprintf(string, "%s%d", dimname, idim); | ^~ /build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincresample/mincresample.c:1454:36: note: directive argument in the range [0, 2147483647] 1454 | (void) sprintf(string, "%s%d", dimname, idim); | ^~~~~~ In file included from /usr/include/stdio.h:970, from /build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincresample/mincresample.c:207: In function 'sprintf', inlined from 'create_output_file.constprop' at /build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincresample/mincresample.c:1454:20: /usr/include/x86_64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 2 and 266 bytes into a destination of size 256 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ make[3]: Entering directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/minc-tools-2.3.00+dfsg /build/reproducible-path/minc-tools-2.3.00+dfsg/progs /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs 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/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincwindow/mincwindow.c [ 42%] Building C object progs/CMakeFiles/minccalc.dir/minccalc/optim.c.o cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT 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-I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/mincgen.dir/mincgen/escapes.c.o -MF CMakeFiles/mincgen.dir/mincgen/escapes.c.o.d -o CMakeFiles/mincgen.dir/mincgen/escapes.c.o -c /build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincgen/escapes.c [ 44%] Building C object progs/CMakeFiles/minctoraw.dir/Proglib/minc_endian.c.o cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu 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progs/CMakeFiles/mincmorph.dir/mincmorph/kernel_io.c.o make[3]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' make -f progs/CMakeFiles/mincsample.dir/build.make progs/CMakeFiles/mincsample.dir/build cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time 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directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' make -f progs/CMakeFiles/rawtominc.dir/build.make progs/CMakeFiles/rawtominc.dir/build make[3]: Entering directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' [ 50%] Building C object progs/CMakeFiles/rawtominc.dir/rawtominc/rawtominc.c.o cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/rawtominc.dir/rawtominc/rawtominc.c.o -MF CMakeFiles/rawtominc.dir/rawtominc/rawtominc.c.o.d -o CMakeFiles/rawtominc.dir/rawtominc/rawtominc.c.o -c /build/reproducible-path/minc-tools-2.3.00+dfsg/progs/rawtominc/rawtominc.c [ 50%] Building C object progs/CMakeFiles/mincresample.dir/mincresample/resample_volumes.c.o cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/mincresample.dir/mincresample/resample_volumes.c.o -MF CMakeFiles/mincresample.dir/mincresample/resample_volumes.c.o.d -o CMakeFiles/mincresample.dir/mincresample/resample_volumes.c.o -c /build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincresample/resample_volumes.c [ 51%] Building C object progs/CMakeFiles/mincgen.dir/mincgen/genlib.c.o cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu 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make[3]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' [ 57%] Built target mincwindow [ 57%] Built target minctoraw make -f progs/CMakeFiles/voxeltoworld.dir/build.make progs/CMakeFiles/voxeltoworld.dir/depend [ 57%] Built target mincreshape make[3]: Entering directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/minc-tools-2.3.00+dfsg /build/reproducible-path/minc-tools-2.3.00+dfsg/progs /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs/CMakeFiles/voxeltoworld.dir/DependInfo.cmake "--color=" make -f progs/CMakeFiles/worldtovoxel.dir/build.make progs/CMakeFiles/worldtovoxel.dir/depend make[3]: Entering 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/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincgen/getfill.c make -f progs/CMakeFiles/voxeltoworld.dir/build.make progs/CMakeFiles/voxeltoworld.dir/build make[3]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' make -f progs/CMakeFiles/worldtovoxel.dir/build.make progs/CMakeFiles/worldtovoxel.dir/build make[3]: Entering directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' [ 59%] Linking C executable mincsample cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cmake -E cmake_link_script CMakeFiles/mincsample.dir/link.txt --verbose=1 [ 61%] Building C object progs/CMakeFiles/voxeltoworld.dir/coordinates/voxeltoworld.c.o [ 61%] Building C object progs/CMakeFiles/worldtovoxel.dir/coordinates/worldtovoxel.c.o cd 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/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/coordinates/voxeltoworld.c cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/worldtovoxel.dir/coordinates/worldtovoxel.c.o -MF 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-Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -rdynamic CMakeFiles/rawtominc.dir/rawtominc/rawtominc.c.o CMakeFiles/rawtominc.dir/Proglib/convert_origin_to_start.c.o -o rawtominc -L/usr/lib/x86_64-linux-gnu/lib -Wl,-rpath,/usr/lib/x86_64-linux-gnu/lib: -lminc2 -lm -lz -lm -ldl -lnetcdf -lm -ldl -lnetcdf /usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -rdynamic CMakeFiles/minccalc.dir/minccalc/minccalc.c.o CMakeFiles/minccalc.dir/minccalc/eval.c.o CMakeFiles/minccalc.dir/minccalc/ident.c.o CMakeFiles/minccalc.dir/minccalc/node.c.o CMakeFiles/minccalc.dir/minccalc/optim.c.o CMakeFiles/minccalc.dir/minccalc/scalar.c.o CMakeFiles/minccalc.dir/minccalc/sym.c.o CMakeFiles/minccalc.dir/minccalc/vector.c.o CMakeFiles/minccalc.dir/lex.c.o CMakeFiles/minccalc.dir/gram.c.o -o minccalc -L/usr/lib/x86_64-linux-gnu/lib -Wl,-rpath,/usr/lib/x86_64-linux-gnu/lib: -lminc2 -lm -lz -lm -ldl -lnetcdf -lm -ldl -lnetcdf /build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincgen/genlib.c: In function 'gen_c': /build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincgen/genlib.c:161:28: warning: '%.16g' directive writing between 1 and 23 bytes into a region of size 20 [-Wformat-overflow=] 161 | (void) sprintf(cp,"%.16g",* (doublep + num)); | ^~~~~ In function 'cstring', inlined from 'gen_c' at /build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincgen/genlib.c:361:20: /build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincgen/genlib.c:161:27: note: assuming directive output of 22 bytes 161 | (void) sprintf(cp,"%.16g",* (doublep + num)); | ^~~~~~~ In file included from /usr/include/stdio.h:970, from /build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincgen/genlib.c:11: In function 'sprintf', inlined from 'cstring' at /build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincgen/genlib.c:161:9, inlined from 'gen_c' at /build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincgen/genlib.c:361:20: /usr/include/x86_64-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 2 and 24 bytes into a destination of size 20 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ [ 63%] Built target mincstats make -f progs/CMakeFiles/xfminvert.dir/build.make progs/CMakeFiles/xfminvert.dir/depend make[3]: Entering directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/minc-tools-2.3.00+dfsg /build/reproducible-path/minc-tools-2.3.00+dfsg/progs /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs/CMakeFiles/xfminvert.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' [ 64%] Linking C executable voxeltoworld make -f progs/CMakeFiles/xfminvert.dir/build.make progs/CMakeFiles/xfminvert.dir/build make[3]: Entering directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cmake -E cmake_link_script CMakeFiles/voxeltoworld.dir/link.txt --verbose=1 [ 65%] Linking C executable mincmorph cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cmake -E cmake_link_script CMakeFiles/mincmorph.dir/link.txt --verbose=1 /usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -rdynamic CMakeFiles/voxeltoworld.dir/coordinates/voxeltoworld.c.o -o voxeltoworld -L/usr/lib/x86_64-linux-gnu/lib -Wl,-rpath,/usr/lib/x86_64-linux-gnu/lib: -lminc2 -lm -lz -lm -ldl -lnetcdf -lminc2 -lm -lz -lm -ldl -lnetcdf -lminc2 -lm -lz -lm -ldl -lnetcdf -lm -lminc2 -lm -lz -ldl -lnetcdf [ 66%] Building C object progs/CMakeFiles/xfminvert.dir/xfm/xfminvert.c.o cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/xfminvert.dir/xfm/xfminvert.c.o -MF CMakeFiles/xfminvert.dir/xfm/xfminvert.c.o.d -o CMakeFiles/xfminvert.dir/xfm/xfminvert.c.o -c /build/reproducible-path/minc-tools-2.3.00+dfsg/progs/xfm/xfminvert.c /usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -rdynamic CMakeFiles/mincmorph.dir/mincmorph/mincmorph.c.o CMakeFiles/mincmorph.dir/mincmorph/kernel_io.c.o CMakeFiles/mincmorph.dir/mincmorph/kernel_ops.c.o -o mincmorph -L/usr/lib/x86_64-linux-gnu/lib -Wl,-rpath,/usr/lib/x86_64-linux-gnu/lib: -lminc2 -lm -lz -lm -ldl -lnetcdf -lminc2 -lm -lz -lm -ldl -lnetcdf -lminc2 -lm -lz -lm -ldl -lnetcdf -lm -lminc2 -lm -lz -ldl -lnetcdf [ 66%] Linking C executable worldtovoxel cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cmake -E cmake_link_script CMakeFiles/worldtovoxel.dir/link.txt --verbose=1 [ 67%] Building C object progs/CMakeFiles/mincgen.dir/mincgen/load.c.o cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/Proglib -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/mincgen.dir/mincgen/load.c.o -MF CMakeFiles/mincgen.dir/mincgen/load.c.o.d -o 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69%] Linking C executable xfmconcat make -f progs/CMakeFiles/mincblob.dir/build.make progs/CMakeFiles/mincblob.dir/depend cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cmake -E cmake_link_script CMakeFiles/xfmconcat.dir/link.txt --verbose=1 make[3]: Entering directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/minc-tools-2.3.00+dfsg /build/reproducible-path/minc-tools-2.3.00+dfsg/progs /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs/CMakeFiles/mincblob.dir/DependInfo.cmake "--color=" /usr/bin/cc -g -O2 -Werror=implicit-function-declaration 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-I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/minccalc -I/build/reproducible-path/minc-tools-2.3.00+dfsg/progs/mincgen -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT progs/CMakeFiles/minccmp.dir/minccmp/minccmp.c.o -MF CMakeFiles/minccmp.dir/minccmp/minccmp.c.o.d -o CMakeFiles/minccmp.dir/minccmp/minccmp.c.o -c /build/reproducible-path/minc-tools-2.3.00+dfsg/progs/minccmp/minccmp.c cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/conversion && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/Acr_nema -I/usr/include/nifti -g -O2 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-I/build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/Acr_nema -I/usr/include/nifti -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT conversion/CMakeFiles/ecattominc.dir/ecattominc/ecattominc.c.o -MF CMakeFiles/ecattominc.dir/ecattominc/ecattominc.c.o.d -o CMakeFiles/ecattominc.dir/ecattominc/ecattominc.c.o -c /build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/ecattominc/ecattominc.c cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/conversion && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/Acr_nema -I/usr/include/nifti -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT conversion/CMakeFiles/minctoecat.dir/minctoecat/minctoecat.c.o -MF CMakeFiles/minctoecat.dir/minctoecat/minctoecat.c.o.d -o CMakeFiles/minctoecat.dir/minctoecat/minctoecat.c.o -c /build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/minctoecat/minctoecat.c [ 76%] Linking C executable mincresample cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cmake -E cmake_link_script CMakeFiles/mincresample.dir/link.txt --verbose=1 /usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -rdynamic CMakeFiles/mincresample.dir/mincresample/mincresample.c.o CMakeFiles/mincresample.dir/mincresample/resample_volumes.c.o CMakeFiles/mincresample.dir/Proglib/convert_origin_to_start.c.o -o mincresample -L/usr/lib/x86_64-linux-gnu/lib -Wl,-rpath,/usr/lib/x86_64-linux-gnu/lib: -lminc2 -lm -lz -lm -ldl -lnetcdf -lminc2 -lm -lz -lm -ldl -lnetcdf -lminc2 -lm -lz -lm -ldl -lnetcdf -lm -lminc2 -lm -lz -ldl -lnetcdf make[3]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' [ 76%] Built target rawtominc [ 76%] Built target xfmconcat [ 76%] Built target worldtovoxel make -f conversion/CMakeFiles/mnc2nii.dir/build.make conversion/CMakeFiles/mnc2nii.dir/depend [ 76%] Built target transformtags make[3]: Entering directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/minc-tools-2.3.00+dfsg /build/reproducible-path/minc-tools-2.3.00+dfsg/conversion /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/conversion /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/conversion/CMakeFiles/mnc2nii.dir/DependInfo.cmake "--color=" make -f conversion/CMakeFiles/nii2mnc.dir/build.make conversion/CMakeFiles/nii2mnc.dir/depend make[3]: Entering directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/minc-tools-2.3.00+dfsg /build/reproducible-path/minc-tools-2.3.00+dfsg/conversion /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/conversion /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/conversion/CMakeFiles/nii2mnc.dir/DependInfo.cmake "--color=" make[3]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' [ 77%] Building C object conversion/CMakeFiles/ecattominc.dir/ecattominc/insertblood.c.o [ 78%] Building C object conversion/CMakeFiles/minctoecat.dir/minctoecat/ecat_write.c.o make[3]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/conversion && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/Acr_nema -I/usr/include/nifti -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT conversion/CMakeFiles/ecattominc.dir/ecattominc/insertblood.c.o -MF CMakeFiles/ecattominc.dir/ecattominc/insertblood.c.o.d -o CMakeFiles/ecattominc.dir/ecattominc/insertblood.c.o -c /build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/ecattominc/insertblood.c make -f conversion/CMakeFiles/mnc2nii.dir/build.make conversion/CMakeFiles/mnc2nii.dir/build cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/conversion && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/Acr_nema -I/usr/include/nifti -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT conversion/CMakeFiles/minctoecat.dir/minctoecat/ecat_write.c.o -MF CMakeFiles/minctoecat.dir/minctoecat/ecat_write.c.o.d -o CMakeFiles/minctoecat.dir/minctoecat/ecat_write.c.o -c /build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/minctoecat/ecat_write.c make[3]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' make -f conversion/CMakeFiles/nii2mnc.dir/build.make conversion/CMakeFiles/nii2mnc.dir/build make[3]: Entering directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' [ 79%] Linking C executable mincgen [ 80%] Building C object conversion/CMakeFiles/nii2mnc.dir/nifti1/nii2mnc.c.o cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cmake -E cmake_link_script CMakeFiles/mincgen.dir/link.txt --verbose=1 cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/conversion && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/Acr_nema -I/usr/include/nifti -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT conversion/CMakeFiles/nii2mnc.dir/nifti1/nii2mnc.c.o -MF CMakeFiles/nii2mnc.dir/nifti1/nii2mnc.c.o.d -o CMakeFiles/nii2mnc.dir/nifti1/nii2mnc.c.o -c /build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/nifti1/nii2mnc.c [ 81%] Building C object conversion/CMakeFiles/mnc2nii.dir/nifti1/mnc2nii.c.o cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/conversion && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/Acr_nema -I/usr/include/nifti -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT conversion/CMakeFiles/mnc2nii.dir/nifti1/mnc2nii.c.o -MF CMakeFiles/mnc2nii.dir/nifti1/mnc2nii.c.o.d -o CMakeFiles/mnc2nii.dir/nifti1/mnc2nii.c.o -c /build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/nifti1/mnc2nii.c /usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -rdynamic CMakeFiles/mincgen.dir/mincgen/main.c.o CMakeFiles/mincgen.dir/ncgentab.c.o CMakeFiles/mincgen.dir/ncgenyy.c.o CMakeFiles/mincgen.dir/mincgen/escapes.c.o CMakeFiles/mincgen.dir/mincgen/genlib.c.o CMakeFiles/mincgen.dir/mincgen/getfill.c.o CMakeFiles/mincgen.dir/mincgen/init.c.o CMakeFiles/mincgen.dir/mincgen/load.c.o -o mincgen -L/usr/lib/x86_64-linux-gnu/lib -Wl,-rpath,/usr/lib/x86_64-linux-gnu/lib: -lminc2 -lm -lz -lm -ldl -lnetcdf /build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/nifti1/nii2mnc.c: In function 'main': /build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/nifti1/nii2mnc.c:204:13: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 204 | fread(&ana_hdr, sizeof (ana_hdr), 1, fp); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 81%] Built target xfminvert make -f conversion/CMakeFiles/upet2mnc.dir/build.make conversion/CMakeFiles/upet2mnc.dir/depend make[3]: Entering directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/minc-tools-2.3.00+dfsg /build/reproducible-path/minc-tools-2.3.00+dfsg/conversion /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/conversion /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/conversion/CMakeFiles/upet2mnc.dir/DependInfo.cmake "--color=" [ 82%] Building C object conversion/CMakeFiles/ecattominc.dir/ecattominc/ecat_file.c.o cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/conversion && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/Acr_nema -I/usr/include/nifti -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT conversion/CMakeFiles/ecattominc.dir/ecattominc/ecat_file.c.o -MF CMakeFiles/ecattominc.dir/ecattominc/ecat_file.c.o.d -o CMakeFiles/ecattominc.dir/ecattominc/ecat_file.c.o -c /build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/ecattominc/ecat_file.c make[3]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' make -f conversion/CMakeFiles/upet2mnc.dir/build.make conversion/CMakeFiles/upet2mnc.dir/build make[3]: Entering directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' [ 83%] Building C object conversion/CMakeFiles/upet2mnc.dir/micropet/upet2mnc.c.o cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/conversion && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/Acr_nema -I/usr/include/nifti -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT conversion/CMakeFiles/upet2mnc.dir/micropet/upet2mnc.c.o -MF CMakeFiles/upet2mnc.dir/micropet/upet2mnc.c.o.d -o CMakeFiles/upet2mnc.dir/micropet/upet2mnc.c.o -c /build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/micropet/upet2mnc.c [ 83%] Linking C executable mincblob cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs && /usr/bin/cmake -E cmake_link_script CMakeFiles/mincblob.dir/link.txt --verbose=1 /usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -rdynamic CMakeFiles/mincblob.dir/mincblob/mincblob.c.o -o mincblob -L/usr/lib/x86_64-linux-gnu/lib -Wl,-rpath,/usr/lib/x86_64-linux-gnu/lib: -lminc2 -lm -lz -lm -ldl -lnetcdf -lminc2 -lm -lz -lm -ldl -lnetcdf -lminc2 -lm -lz -lm -ldl -lnetcdf -lm -lminc2 -lm -lz -ldl -lnetcdf /build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/micropet/upet2mnc.c:419:36: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 419 | {NULL, ARGV_VERINFO, (char *) VERSIONSTR, (char *) NULL, NULL}, | ^~~~~~~~~~ /build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/micropet/upet2mnc.c:16:38: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 16 | #define VERSIONSTR VERSION " built " __DATE__ " " __TIME__ | ^~~~~~~~ /build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/micropet/upet2mnc.c:419:36: note: in expansion of macro 'VERSIONSTR' 419 | {NULL, ARGV_VERINFO, (char *) VERSIONSTR, (char *) NULL, NULL}, | ^~~~~~~~~~ /build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/micropet/upet2mnc.c: In function 'upet_to_minc': /build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/micropet/upet2mnc.c:537:19: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 537 | argv_tmp[1] = VERSIONSTR; | ^~~~~~~~~~ /build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/micropet/upet2mnc.c:16:38: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 16 | #define VERSIONSTR VERSION " built " __DATE__ " " __TIME__ | ^~~~~~~~ /build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/micropet/upet2mnc.c:537:19: note: in expansion of macro 'VERSIONSTR' 537 | argv_tmp[1] = VERSIONSTR; | ^~~~~~~~~~ make[3]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' [ 83%] Built target mincgen [ 83%] Built target mincresample [ 83%] Building C object conversion/CMakeFiles/ecattominc.dir/ecattominc/machine_indep.c.o [ 83%] Building C object conversion/CMakeFiles/minctoecat.dir/minctoecat/machine_indep.c.o cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/conversion && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/Acr_nema -I/usr/include/nifti -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT conversion/CMakeFiles/minctoecat.dir/minctoecat/machine_indep.c.o -MF CMakeFiles/minctoecat.dir/minctoecat/machine_indep.c.o.d -o CMakeFiles/minctoecat.dir/minctoecat/machine_indep.c.o -c /build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/minctoecat/machine_indep.c cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/conversion && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/Acr_nema -I/usr/include/nifti -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT conversion/CMakeFiles/ecattominc.dir/ecattominc/machine_indep.c.o -MF CMakeFiles/ecattominc.dir/ecattominc/machine_indep.c.o.d -o CMakeFiles/ecattominc.dir/ecattominc/machine_indep.c.o -c /build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/ecattominc/machine_indep.c [ 84%] Building C object conversion/CMakeFiles/acr_nema.dir/Acr_nema/dicom_client_routines.c.o cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/conversion && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/Acr_nema -I/usr/include/nifti -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT conversion/CMakeFiles/acr_nema.dir/Acr_nema/dicom_client_routines.c.o -MF CMakeFiles/acr_nema.dir/Acr_nema/dicom_client_routines.c.o.d -o CMakeFiles/acr_nema.dir/Acr_nema/dicom_client_routines.c.o -c 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/build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/Acr_nema/dicom_network.c [ 86%] Building C object conversion/CMakeFiles/acr_nema.dir/Acr_nema/element.c.o cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/conversion && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/Acr_nema -I/usr/include/nifti -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT conversion/CMakeFiles/acr_nema.dir/Acr_nema/element.c.o -MF CMakeFiles/acr_nema.dir/Acr_nema/element.c.o.d -o CMakeFiles/acr_nema.dir/Acr_nema/element.c.o -c 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88%] Building C object conversion/CMakeFiles/acr_nema.dir/Acr_nema/globals.c.o [ 88%] Linking C executable mnc2nii [ 88%] Building C object conversion/CMakeFiles/acr_nema.dir/Acr_nema/file_io.c.o cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/conversion && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/Acr_nema -I/usr/include/nifti -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT conversion/CMakeFiles/acr_nema.dir/Acr_nema/globals.c.o -MF CMakeFiles/acr_nema.dir/Acr_nema/globals.c.o.d -o CMakeFiles/acr_nema.dir/Acr_nema/globals.c.o -c /build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/Acr_nema/globals.c cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/conversion && /usr/bin/cmake -E cmake_link_script CMakeFiles/mnc2nii.dir/link.txt --verbose=1 [ 89%] Linking C executable ecattominc cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/conversion && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/Acr_nema -I/usr/include/nifti -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT conversion/CMakeFiles/acr_nema.dir/Acr_nema/file_io.c.o -MF 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-fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -rdynamic CMakeFiles/upet2mnc.dir/micropet/upet2mnc.c.o -o upet2mnc -L/usr/lib/x86_64-linux-gnu/lib -Wl,-rpath,/usr/lib/x86_64-linux-gnu/lib: -lminc2 -lm -lz -lm -ldl -lnetcdf make[3]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' [ 93%] Built target ecattominc make[3]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' [ 93%] Built target mnc2nii [ 93%] Built target upet2mnc [ 93%] Built target nii2mnc [ 94%] Linking C static library libacr_nema.a cd 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-o CMakeFiles/dcm2mnc.dir/dcm2mnc/string_to_filename.c.o -c /build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/dcm2mnc/string_to_filename.c [ 97%] Building C object conversion/CMakeFiles/dcm2mnc.dir/dcm2mnc/dicom_read.c.o cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/conversion && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/Acr_nema -I/usr/include/nifti -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT conversion/CMakeFiles/dcm2mnc.dir/dcm2mnc/dcm2mnc.c.o -MF CMakeFiles/dcm2mnc.dir/dcm2mnc/dcm2mnc.c.o.d -o CMakeFiles/dcm2mnc.dir/dcm2mnc/dcm2mnc.c.o -c /build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/dcm2mnc/dcm2mnc.c cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/conversion && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/Acr_nema -I/usr/include/nifti -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT conversion/CMakeFiles/dcm2mnc.dir/dcm2mnc/minc_file.c.o -MF CMakeFiles/dcm2mnc.dir/dcm2mnc/minc_file.c.o.d -o CMakeFiles/dcm2mnc.dir/dcm2mnc/minc_file.c.o -c /build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/dcm2mnc/minc_file.c [ 98%] Building C object conversion/CMakeFiles/dcm2mnc.dir/dcm2mnc/dicom_to_minc.c.o cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/conversion && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/Acr_nema -I/usr/include/nifti -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT conversion/CMakeFiles/dcm2mnc.dir/dcm2mnc/dicom_read.c.o -MF CMakeFiles/dcm2mnc.dir/dcm2mnc/dicom_read.c.o.d -o CMakeFiles/dcm2mnc.dir/dcm2mnc/dicom_read.c.o -c /build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/dcm2mnc/dicom_read.c [ 99%] Building C object conversion/CMakeFiles/dcm2mnc.dir/dcm2mnc/siemens_to_dicom.c.o [100%] Building C object conversion/CMakeFiles/dcm2mnc.dir/dcm2mnc/progress.c.o cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/conversion && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/Acr_nema -I/usr/include/nifti -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT conversion/CMakeFiles/dcm2mnc.dir/dcm2mnc/dicom_to_minc.c.o -MF CMakeFiles/dcm2mnc.dir/dcm2mnc/dicom_to_minc.c.o.d -o CMakeFiles/dcm2mnc.dir/dcm2mnc/dicom_to_minc.c.o -c /build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/dcm2mnc/dicom_to_minc.c cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/conversion && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/Acr_nema -I/usr/include/nifti -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT conversion/CMakeFiles/dcm2mnc.dir/dcm2mnc/siemens_to_dicom.c.o -MF CMakeFiles/dcm2mnc.dir/dcm2mnc/siemens_to_dicom.c.o.d -o CMakeFiles/dcm2mnc.dir/dcm2mnc/siemens_to_dicom.c.o -c /build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/dcm2mnc/siemens_to_dicom.c cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/conversion && /usr/bin/cc -DHAVE_CONFIG_H -DHAVE_MINC1=1 -DHAVE_MINC2=1 -DMINC2=1 -I/usr/lib/x86_64-linux-gnu/include -I/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu -I/build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/Acr_nema -I/usr/include/nifti -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -MD -MT conversion/CMakeFiles/dcm2mnc.dir/dcm2mnc/progress.c.o -MF CMakeFiles/dcm2mnc.dir/dcm2mnc/progress.c.o.d -o CMakeFiles/dcm2mnc.dir/dcm2mnc/progress.c.o -c /build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/dcm2mnc/progress.c /build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/dcm2mnc/dcm2mnc.c:179:26: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 179 | {NULL, ARGV_VERINFO, VERSION_STRING, NULL, NULL }, | ^~~~~~~~~~~~~~ /build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/dcm2mnc/dcm2mnc.c:168:41: warning: macro "__TIME__" might prevent reproducible builds [-Wdate-time] 168 | #define VERSION_STRING "2.01.02 built " __DATE__ " " __TIME__ | ^~~~~~~~ /build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/dcm2mnc/dcm2mnc.c:179:26: note: in expansion of macro 'VERSION_STRING' 179 | {NULL, ARGV_VERINFO, VERSION_STRING, NULL, NULL }, | ^~~~~~~~~~~~~~ /build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/dcm2mnc/dcm2mnc.c: In function 'is_cdexport_file': /build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/dcm2mnc/dcm2mnc.c:1019:9: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 1019 | fread(tst_str, 1, DICM_MAGIC_SIZE, fp); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/dcm2mnc/minc_file.c: In function 'setup_minc_variables': /build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/dcm2mnc/dcm2mnc.c: In function 'is_ima_file': /build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/dcm2mnc/minc_file.c:1084:17: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 1084 | fread(data, 1, length, fp); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/dcm2mnc/dcm2mnc.c:1042:9: warning: ignoring return value of 'fread' declared with attribute 'warn_unused_result' [-Wunused-result] 1042 | fread(mfg_str, 1, IMA_MAGIC_SIZE, fp); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/dcm2mnc/dcm2mnc.c: In function 'use_the_files': /build/reproducible-path/minc-tools-2.3.00+dfsg/conversion/dcm2mnc/dcm2mnc.c:980:17: warning: ignoring return value of 'fscanf' declared with attribute 'warn_unused_result' [-Wunused-result] 980 | fscanf(fp, "%s", pipe_output_name); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [100%] Linking C executable dcm2mnc cd /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/conversion && /usr/bin/cmake -E cmake_link_script CMakeFiles/dcm2mnc.dir/link.txt --verbose=1 /usr/bin/cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/minc-tools-2.3.00+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/hdf5/serial -Wl,-z,relro -Wl,-z,now -Wl,-L/usr/lib/x86_64-linux-gnu/hdf5/serial -rdynamic CMakeFiles/dcm2mnc.dir/dcm2mnc/dcm2mnc.c.o CMakeFiles/dcm2mnc.dir/dcm2mnc/dicom_to_minc.c.o CMakeFiles/dcm2mnc.dir/dcm2mnc/siemens_to_dicom.c.o CMakeFiles/dcm2mnc.dir/dcm2mnc/dicom_read.c.o CMakeFiles/dcm2mnc.dir/dcm2mnc/minc_file.c.o CMakeFiles/dcm2mnc.dir/dcm2mnc/progress.c.o CMakeFiles/dcm2mnc.dir/dcm2mnc/string_to_filename.c.o -o dcm2mnc -L/usr/lib/x86_64-linux-gnu/lib -Wl,-rpath,/usr/lib/x86_64-linux-gnu/lib: -lminc2 -lm -lz -lm -ldl -lnetcdf libacr_nema.a -lminc2 -lm -lz -lm -ldl -lnetcdf make[3]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' [100%] Built target dcm2mnc make[2]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/CMakeFiles 0 make[1]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' dh_auto_test cd obj-x86_64-linux-gnu && make -j12 test ARGS\+=--verbose ARGS\+=-j12 make[1]: Entering directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' Running tests... /usr/bin/ctest --force-new-ctest-process --verbose -j12 UpdateCTestConfiguration from :/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/DartConfiguration.tcl Parse Config file:/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/DartConfiguration.tcl UpdateCTestConfiguration from :/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/DartConfiguration.tcl Parse Config file:/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/DartConfiguration.tcl Test project /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu Constructing a list of tests Done constructing a list of tests Updating test list for fixtures Added 0 tests to meet fixture requirements Checking test dependency graph... Checking test dependency graph end test 1 Start 1: mincinfo-test 1: Test command: /build/reproducible-path/minc-tools-2.3.00+dfsg/Testing/mincinfo-test.pl 1: Working Directory: /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/Testing 1: Environment variables: 1: MINCINFO_BIN=/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs/mincinfo 1: Test timeout computed to be: 1500 test 2 Start 2: mincstats-test 2: Test command: /build/reproducible-path/minc-tools-2.3.00+dfsg/Testing/mincstats-test.pl 2: Working Directory: /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/Testing 2: Environment variables: 2: MINCSTATS_BIN=/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs/mincstats 2: Test timeout computed to be: 1500 test 3 Start 3: mincaverage-test 3: Test command: /build/reproducible-path/minc-tools-2.3.00+dfsg/Testing/mincaverage-test.sh 3: Working Directory: /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/Testing 3: Environment variables: 3: MINCAVERAGE_BIN=/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs/mincaverage 3: MINCSTATS_BIN=/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs/mincstats 3: Test timeout computed to be: 1500 test 4 Start 4: minccalc-test 4: Test command: /build/reproducible-path/minc-tools-2.3.00+dfsg/Testing/minccalc-test.sh 4: Working Directory: /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/Testing 4: Environment variables: 4: MINCCALC_BIN=/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs/minccalc 4: MINCSTATS_BIN=/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs/mincstats 4: Test timeout computed to be: 1500 test 5 Start 5: mincresample-test 5: Test command: /build/reproducible-path/minc-tools-2.3.00+dfsg/Testing/mincresample-test.sh 5: Working Directory: /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/Testing 5: Environment variables: 5: MINCRESAMPLE_BIN=/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs/mincresample 5: MINCSTATS_BIN=/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs/mincstats 5: Test timeout computed to be: 1500 test 6 Start 6: mincreshape-test 6: Test command: /build/reproducible-path/minc-tools-2.3.00+dfsg/Testing/mincreshape-test.pl 6: Working Directory: /build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/Testing 6: Environment variables: 6: MINCRESHAPE_BIN=/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs/mincreshape 6: MINCSTATS_BIN=/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs/mincstats 6: MINCINFO_BIN=/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs/mincinfo 6: MINCEXTRACT_BIN=/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu/progs/mincextract 6: Test timeout computed to be: 1500 1: Case 1 - Test the essential command line options. 2: Case 1 - Basic output. 2: Case 2 - Test the sum and sum2 options. 5: Transforming slices:.....Done 3: Processing:...Done 1: Case 2 - test operation with no command-line options. 2: Case 3 - Test the mean option. 4: Case 1...OK 1: Case 3 - test the dimnames option. 2: Case 4 - Test the stddev and variance options. 3: Normalizing:..Done 5: Transforming slices:.....Done 3: Processing:...Done 1: Case 4 - test the varnames option. 2: Case 5 - Test the min and max options. 1: Case 5 - test the dimlength option. 2: Case 6 - Test the CoM option. 1: Case 6 - test the vartype option. 2: Case 7 - Test the median and entropy options. 1: Case 7 - test the vardims option. 2: Case 8 - Test the histogram option. 1: Case 8 - test the varatts option. 2: Case 9 - Test the integer histogram option. 1: Case 9 - test the varatts option. 4: Case 2...OK 5: OK. 1/6 Test #5: mincresample-test ................ Passed 0.12 sec 2: OK. 2/6 Test #2: mincstats-test ................... Passed 0.12 sec 3: OK. 3/6 Test #3: mincaverage-test ................. Passed 0.12 sec 1: Case 10 - test the atttype option. 1: Case 11 - test the attvalue option. 1: Case 12 - test the minc_version option. 1: Case 13 - test the error_string option. 1: OK. 4/6 Test #1: mincinfo-test .................... Passed 0.20 sec 4: Case 3...OK 6: OK. 5/6 Test #6: mincreshape-test ................. Passed 0.23 sec 4: Case 4...OK 4: Case 5...OK...OK 4: Case 6...OK...OK...OK 4: Case 7...OK 4: Case 8...OK 4: Case 9...OK 4: No errors detected. 6/6 Test #4: minccalc-test .................... Passed 0.82 sec 100% tests passed, 0 tests failed out of 6 Total Test time (real) = 0.83 sec make[1]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install --destdir=debian/minc-tools/ cd obj-x86_64-linux-gnu && make -j12 install DESTDIR=/build/reproducible-path/minc-tools-2.3.00\+dfsg/debian/minc-tools AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/minc-tools-2.3.00+dfsg -B/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall make[2]: Entering directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' make[2]: Nothing to be done for 'preinstall'. make[2]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "None" -- Installing: /build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/minccalc -- Set non-toolchain portion of runtime path of "/build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/minccalc" to "" -- Installing: /build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincgen -- Set non-toolchain portion of runtime path of "/build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincgen" to "" -- Installing: /build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/invert_raw_image -- Set non-toolchain portion of runtime path of "/build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/invert_raw_image" to "" -- Installing: /build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincaverage -- Set non-toolchain portion of runtime path of "/build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincaverage" to "" -- Installing: /build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincconcat -- Set non-toolchain portion of runtime path of "/build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincconcat" to "" -- Installing: /build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincconvert -- Set non-toolchain portion of runtime path of "/build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincconvert" to "" -- Installing: /build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/minccopy -- Set non-toolchain portion of runtime path of "/build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/minccopy" to "" -- Installing: /build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincdump -- Set non-toolchain portion of runtime path of "/build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincdump" to "" -- Installing: /build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincblob -- Set non-toolchain portion of runtime path of "/build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincblob" to "" -- Installing: /build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/minccmp -- Set non-toolchain portion of runtime path of "/build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/minccmp" to "" -- Installing: /build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincexpand -- Set non-toolchain portion of runtime path of "/build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincexpand" to "" -- Installing: /build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincextract -- Set non-toolchain portion of runtime path of "/build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincextract" to "" -- Installing: /build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincinfo -- Set non-toolchain portion of runtime path of "/build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincinfo" to "" -- Installing: /build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/minclookup -- Set non-toolchain portion of runtime path of "/build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/minclookup" to "" -- Installing: /build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincmakescalar -- Set non-toolchain portion of runtime path of "/build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincmakescalar" to "" -- Installing: /build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincmakevector -- Set non-toolchain portion of runtime path of "/build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincmakevector" to "" -- Installing: /build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincmath -- Set non-toolchain portion of runtime path of "/build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincmath" to "" -- Installing: /build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/minc_modify_header -- Set non-toolchain portion of runtime path of "/build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/minc_modify_header" to "" -- Installing: /build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincresample -- Set non-toolchain portion of runtime path of "/build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincresample" to "" -- Installing: /build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincreshape -- Set non-toolchain portion of runtime path of "/build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincreshape" to "" -- Installing: /build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincstats -- Set non-toolchain portion of runtime path of "/build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincstats" to "" -- Installing: /build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/minctoraw -- Set non-toolchain portion of runtime path of "/build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/minctoraw" to "" -- Installing: /build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincwindow -- Set non-toolchain portion of runtime path of "/build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincwindow" to "" -- Installing: /build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincmorph -- Set non-toolchain portion of runtime path of "/build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincmorph" to "" -- Installing: /build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincsample -- Set non-toolchain portion of runtime path of "/build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincsample" to "" -- Installing: /build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/rawtominc -- Set non-toolchain portion of runtime path of "/build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/rawtominc" to "" -- Installing: /build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/voxeltoworld -- Set non-toolchain portion of runtime path of "/build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/voxeltoworld" to "" -- Installing: /build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/worldtovoxel -- Set non-toolchain portion of runtime path of "/build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/worldtovoxel" to "" -- Installing: /build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/transformtags -- Set non-toolchain portion of runtime path of "/build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/transformtags" to "" -- Installing: /build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/xfmconcat -- Set non-toolchain portion of runtime path of "/build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/xfmconcat" to "" -- Installing: /build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/xfminvert -- Set non-toolchain portion of runtime path of "/build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/xfminvert" to "" -- Installing: /build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincdiff -- Installing: /build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincedit -- Installing: /build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincheader -- Installing: /build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincview -- Installing: /build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/minchistory -- Installing: /build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mincpik -- Installing: /build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/voxeltoworld.1 -- Installing: /build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/mincaverage.1 -- Installing: /build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/mincblob.1 -- Installing: /build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/minccalc.1 -- Installing: /build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/minccmp.1 -- Installing: /build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/mincconcat.1 -- Installing: /build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/mincconvert.1 -- Installing: /build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/minccopy.1 -- Installing: /build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/mincdiff.1 -- Installing: /build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/mincdump.1 -- Installing: /build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/mincedit.1 -- Installing: /build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/mincexpand.1 -- Installing: /build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/mincextract.1 -- Installing: /build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/mincgen.1 -- Installing: /build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/mincheader.1 -- Installing: /build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/mincinfo.1 -- Installing: /build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/minclookup.1 -- Installing: /build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/mincmakescalar.1 -- Installing: /build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/mincmakevector.1 -- Installing: /build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/mincmath.1 -- Installing: /build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/minc_modify_header.1 -- Installing: /build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/mincresample.1 -- Installing: /build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/mincreshape.1 -- Installing: /build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/mincsample.1 -- Installing: /build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/mincstats.1 -- Installing: /build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/minctoraw.1 -- Installing: /build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/invert_raw_image.1 -- Installing: /build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/mincview.1 -- Installing: /build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/mincwindow.1 -- Installing: /build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/rawtominc.1 -- Installing: /build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/transformtags.1 -- Installing: /build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/xfm2def.1 -- Installing: /build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/xfmconcat.1 -- Installing: /build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/xfmflip.1 -- Installing: /build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/xfminvert.1 -- Installing: /build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/dcm2mnc -- Set non-toolchain portion of runtime path of "/build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/dcm2mnc" to "" -- Installing: /build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/ecattominc -- Set non-toolchain portion of runtime path of "/build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/ecattominc" to "" -- Installing: /build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/minctoecat -- Set non-toolchain portion of runtime path of "/build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/minctoecat" to "" -- Installing: /build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mnc2nii -- Set non-toolchain portion of runtime path of "/build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/mnc2nii" to "" -- Installing: /build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/nii2mnc -- Set non-toolchain portion of runtime path of "/build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/nii2mnc" to "" -- Installing: /build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/upet2mnc -- Set non-toolchain portion of runtime path of "/build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/bin/upet2mnc" to "" -- Installing: /build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/dcm2mnc.1 -- Installing: /build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/ecattominc.1 -- Installing: /build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/upet2mnc.1 -- Installing: /build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/minctoecat.1 -- Installing: /build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/mnc2nii.1 -- Installing: /build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/nii2mnc.1 -- Installing: /build/reproducible-path/minc-tools-2.3.00+dfsg/debian/minc-tools/usr/man/man1/vff2mnc.1 make[1]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg/obj-x86_64-linux-gnu' debian/rules override_dh_install make[1]: Entering directory '/build/reproducible-path/minc-tools-2.3.00+dfsg' cd debian/minc-tools && mkdir -p usr/share && mv usr/man usr/share dh_link /usr/share/man/man1/voxeltoworld.1 \ /usr/share/man/man1/worldtovoxel.1 for pl in `grep -Rl '#![[:space:]]*/usr/bin/env[[:space:]]\+perl' debian/*/usr/*` ; do \ sed -i '1s?^#![[:space:]]*/usr/bin/env[[:space:]]\+perl?#!/usr/bin/perl?' ${pl} ; \ done make[1]: Leaving directory '/build/reproducible-path/minc-tools-2.3.00+dfsg' dh_installdocs dh_installchangelogs dh_installexamples dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb dh_gencontrol dpkg-gencontrol: warning: package minc-tools: substitution variable ${perl:Depends} unused, but is defined dpkg-gencontrol: warning: package minc-tools: substitution variable ${perl:Depends} unused, but is defined dh_md5sums dh_builddeb dpkg-deb: building package 'minc-tools' in '../minc-tools_2.3.00+dfsg-11_amd64.deb'. dpkg-deb: building package 'minc-tools-dbgsym' in '../minc-tools-dbgsym_2.3.00+dfsg-11_amd64.deb'. dpkg-genbuildinfo --build=binary -O../minc-tools_2.3.00+dfsg-11_amd64.buildinfo dpkg-genchanges --build=binary -O../minc-tools_2.3.00+dfsg-11_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/36491 and its subdirectories I: Current time: Wed Jan 1 08:16:43 -12 2025 I: pbuilder-time-stamp: 1735762603 Wed Jan 1 20:16:45 UTC 2025 I: 1st build successful. Starting 2nd build on remote node infom02-amd64.debian.net. Wed Jan 1 20:16:45 UTC 2025 I: Preparing to do remote build '2' on infom02-amd64.debian.net. Wed Jan 1 20:20:00 UTC 2025 I: Deleting $TMPDIR on infom02-amd64.debian.net. Wed Jan 1 20:20:01 UTC 2025 I: minc-tools_2.3.00+dfsg-11_amd64.changes: Format: 1.8 Date: Sun, 29 Dec 2024 16:39:42 -0600 Source: minc-tools Binary: minc-tools minc-tools-dbgsym Architecture: amd64 Version: 2.3.00+dfsg-11 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Steve M. Robbins Description: minc-tools - MNI medical image format tools Closes: 1091265 Changes: minc-tools (2.3.00+dfsg-11) unstable; urgency=medium . [ Steve Robbins ] * [418aa2f] Use size_t varaible to match restructure() call. Fixes build failure on armhf; Closes: #1091265. Checksums-Sha1: d762ff42c085fa9a0f46c596b063b1a8d1774ece 711452 minc-tools-dbgsym_2.3.00+dfsg-11_amd64.deb 788ee7edc2599592eb09976104c8faa6bc18fe47 9784 minc-tools_2.3.00+dfsg-11_amd64.buildinfo b02abf62c5b80d5b1cdbfc77392a62ce1e174306 401332 minc-tools_2.3.00+dfsg-11_amd64.deb Checksums-Sha256: 28c07284a99222ffa6f9bcb657353a3d5d5d26f94775a06cb17a7e76e82c4497 711452 minc-tools-dbgsym_2.3.00+dfsg-11_amd64.deb 20126ff3a119355efd522be99977212f652580c13cb92fa4d4b65893d456f5e7 9784 minc-tools_2.3.00+dfsg-11_amd64.buildinfo 6bdffdbe528472e72e3e9d0f3d4611df2e93a711370dbaff0c1dbe519d37f06c 401332 minc-tools_2.3.00+dfsg-11_amd64.deb Files: 722a38008697ed2381c0714666bfdc26 711452 debug optional minc-tools-dbgsym_2.3.00+dfsg-11_amd64.deb 0265bea55b7cde8feee356d40cb8ae8a 9784 science optional minc-tools_2.3.00+dfsg-11_amd64.buildinfo adc7664e33b08bcb31ae5e2310c9ea08 401332 science optional minc-tools_2.3.00+dfsg-11_amd64.deb Wed Jan 1 20:20:02 UTC 2025 I: diffoscope 284 will be used to compare the two builds: Running as unit: rb-diffoscope-amd64_37-44638.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.UyKvaDQT/minc-tools_2.3.00+dfsg-11.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.UyKvaDQT/minc-tools_2.3.00+dfsg-11.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.UyKvaDQT/minc-tools_2.3.00+dfsg-11.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.UyKvaDQT/b1/minc-tools_2.3.00+dfsg-11_amd64.changes /srv/reproducible-results/rbuild-debian/r-b-build.UyKvaDQT/b2/minc-tools_2.3.00+dfsg-11_amd64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.396s) 0.396s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.027s) 0.027s 12 calls diffoscope.comparators.binary.FilesystemFile ## specialize (total time: 0.000s) 0.000s 1 call specialize Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 803ms CPU time consumed: 800ms Wed Jan 1 20:29:04 UTC 2025 I: diffoscope 284 found no differences in the changes files, and a .buildinfo file also exists. Wed Jan 1 20:29:04 UTC 2025 I: minc-tools from trixie built successfully and reproducibly on amd64. Wed Jan 1 20:29:06 UTC 2025 I: Submitting .buildinfo files to external archives: Wed Jan 1 20:29:06 UTC 2025 I: Submitting 12K b1/minc-tools_2.3.00+dfsg-11_amd64.buildinfo.asc Wed Jan 1 20:29:15 UTC 2025 I: Submitting 12K b2/minc-tools_2.3.00+dfsg-11_amd64.buildinfo.asc Wed Jan 1 20:29:29 UTC 2025 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Wed Jan 1 20:29:29 UTC 2025 I: Done submitting .buildinfo files. Wed Jan 1 20:29:29 UTC 2025 I: Removing signed minc-tools_2.3.00+dfsg-11_amd64.buildinfo.asc files: removed './b1/minc-tools_2.3.00+dfsg-11_amd64.buildinfo.asc' removed './b2/minc-tools_2.3.00+dfsg-11_amd64.buildinfo.asc'