Mon Apr 29 09:49:30 UTC 2024 I: starting to build librg-utils-perl/trixie/amd64 on jenkins on '2024-04-29 09:49' Mon Apr 29 09:49:30 UTC 2024 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/amd64_13/5552/console.log Mon Apr 29 09:49:30 UTC 2024 I: Downloading source for trixie/librg-utils-perl=1.0.43-8 --2024-04-29 09:49:30-- http://deb.debian.org/debian/pool/main/libr/librg-utils-perl/librg-utils-perl_1.0.43-8.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2131 (2.1K) [text/prs.lines.tag] Saving to: ‘librg-utils-perl_1.0.43-8.dsc’ 0K .. 100% 324M=0s 2024-04-29 09:49:30 (324 MB/s) - ‘librg-utils-perl_1.0.43-8.dsc’ saved [2131/2131] Mon Apr 29 09:49:30 UTC 2024 I: librg-utils-perl_1.0.43-8.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: librg-utils-perl Binary: librg-utils-perl Architecture: all Version: 1.0.43-8 Maintainer: Debian Med Packaging Team Uploaders: Guy Yachdav , Laszlo Kajan , Andreas Tille Homepage: https://predictprotein.org/ Standards-Version: 4.6.0 Vcs-Browser: https://salsa.debian.org/med-team/librg-utils-perl Vcs-Git: https://salsa.debian.org/med-team/librg-utils-perl.git Build-Depends: debhelper-compat (= 13), perl, libmodule-build-perl, debhelper Package-List: librg-utils-perl deb perl optional arch=all Checksums-Sha1: 7f502f36e38414d7046ad9295c0e6c88c09d34f9 222433 librg-utils-perl_1.0.43.orig.tar.gz 58f4b2cae26ef80ffaf123b1870dab956049de97 4320 librg-utils-perl_1.0.43-8.debian.tar.xz Checksums-Sha256: 961dda0196688e156a0702ff4609067a3454199ee1e537a5b9229ebe9310a260 222433 librg-utils-perl_1.0.43.orig.tar.gz 0ffb4fd5ff94f7d129a47c7b00e438f84076eee47ba5fab57ac4a048ca5f94e1 4320 librg-utils-perl_1.0.43-8.debian.tar.xz Files: 72955ad3760af32cac8061c198cfff96 222433 librg-utils-perl_1.0.43.orig.tar.gz d6a0c2943d8c9995082c4289447e072a 4320 librg-utils-perl_1.0.43-8.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAmHodLwRHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtH4LhAAlMvUjm2qsnfef9yzEi9zuEUxmQaX7gXK b/gVOf3PZuN4BlwsIMnJkAIO+0/FYFfUIicjSe2YWnbcoIVZo5f9QSUC22Od4zU1 jZOnUtaDmmU80wXyHzZWucH5H5eI5MGiiMi8ombVTCz7nuL/uFez/xL3Lgfq/nHN +vc40C9yBY73LySFA4LskmQbv5SML683Qgnj0FNgvulIqIDMbWp8Koojq44g+9Y7 T3/QGNQKRARFcLT5asODrVirSbWjSI3LkNosLFTssM8Kt2qOyi4zdDgIykfJp1GQ dCj4mR5/QfMunI8GkcAk5yHSygYreKR15NNhPBCbYDdJIcwjOXTktXuTE7bSdbLR MDE09CFS0FQ0pIdD7/i5D93+ZvQ1TTfHPcdnQ8F+WGIKBXgJNbiRpEpZK26/6YdZ VD9GRzQcOwUzErmY2Cz6IXZio0GZetLA0QSUCcStuwL5U2bvF2TjgS9YPyD6CROK jnORRGF4MBidmQ5oF1Y8aVBiRHHwVHP2lev4/yF2dOFHm1wiumqmIkdE92yQSlGx JcuASTToEaAIk5bnbnh2xiZa7Yr0btnuB7Kss9lxE4SaQOMJ1dQ/suHXaYvZTB4U 34bLxqvOWfgG8DAJtyQOqNJdxkLNHgMWkSpWXEBmfY4tJL6eoZ9fHhvnxMt9zXrp NRR6rMZ7sgw= =O5H9 -----END PGP SIGNATURE----- Mon Apr 29 09:49:30 UTC 2024 I: Checking whether the package is not for us Mon Apr 29 09:49:30 UTC 2024 I: Starting 1st build on remote node ionos11-amd64.debian.net. Mon Apr 29 09:49:30 UTC 2024 I: Preparing to do remote build '1' on ionos11-amd64.debian.net. Mon Apr 29 09:51:23 UTC 2024 I: Deleting $TMPDIR on ionos11-amd64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Sun Apr 28 21:49:32 -12 2024 I: pbuilder-time-stamp: 1714384172 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [librg-utils-perl_1.0.43-8.dsc] I: copying [./librg-utils-perl_1.0.43.orig.tar.gz] I: copying [./librg-utils-perl_1.0.43-8.debian.tar.xz] I: Extracting source gpgv: Signature made Wed Jan 19 20:29:48 2022 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./librg-utils-perl_1.0.43-8.dsc: no acceptable signature found dpkg-source: info: extracting librg-utils-perl in librg-utils-perl-1.0.43 dpkg-source: info: unpacking librg-utils-perl_1.0.43.orig.tar.gz dpkg-source: info: unpacking librg-utils-perl_1.0.43-8.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying remove-defined-for-arrays.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/3986625/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='amd64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=20 ' DISTRIBUTION='trixie' HOME='/root' HOST_ARCH='amd64' IFS=' ' INVOCATION_ID='3a89678930404c80ab8d02b382b783a7' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='3986625' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.6mMUlspo/pbuilderrc_yFfO --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.6mMUlspo/b1 --logfile b1/build.log librg-utils-perl_1.0.43-8.dsc' SUDO_GID='111' SUDO_UID='106' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://46.16.76.132:3128' I: uname -a Linux ionos11-amd64 6.1.0-20-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.85-1 (2024-04-11) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Apr 22 12:43 /bin -> usr/bin I: user script /srv/workspace/pbuilder/3986625/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), perl, libmodule-build-perl, debhelper dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19901 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on libmodule-build-perl; however: Package libmodule-build-perl is not installed. pbuilder-satisfydepends-dummy depends on debhelper; however: Package debhelper is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libdebhelper-perl{a} libelf1t64{a} libfile-stripnondeterminism-perl{a} libicu72{a} libmagic-mgc{a} libmagic1{a} libmodule-build-perl{a} libpipeline1{a} libsub-override-perl{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl libmodule-signature-perl libpod-readme-perl libsoftware-license-perl lynx wget 0 packages upgraded, 31 newly installed, 0 to remove and 0 not upgraded. Need to get 19.3 MB of archives. After unpacking 74.1 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main amd64 sensible-utils all 0.0.22 [22.4 kB] Get: 2 http://deb.debian.org/debian trixie/main amd64 libmagic-mgc amd64 1:5.45-2+b1 [314 kB] Get: 3 http://deb.debian.org/debian trixie/main amd64 libmagic1 amd64 1:5.45-2+b1 [105 kB] Get: 4 http://deb.debian.org/debian trixie/main amd64 file amd64 1:5.45-2+b1 [43.1 kB] Get: 5 http://deb.debian.org/debian trixie/main amd64 gettext-base amd64 0.21-14+b1 [161 kB] Get: 6 http://deb.debian.org/debian trixie/main amd64 libuchardet0 amd64 0.0.8-1+b1 [68.8 kB] Get: 7 http://deb.debian.org/debian trixie/main amd64 groff-base amd64 1.23.0-3+b1 [1180 kB] Get: 8 http://deb.debian.org/debian trixie/main amd64 bsdextrautils amd64 2.39.3-6 [89.4 kB] Get: 9 http://deb.debian.org/debian trixie/main amd64 libpipeline1 amd64 1.5.7-2 [38.0 kB] Get: 10 http://deb.debian.org/debian trixie/main amd64 man-db amd64 2.12.0-3 [1401 kB] Get: 11 http://deb.debian.org/debian trixie/main amd64 m4 amd64 1.4.19-4 [287 kB] Get: 12 http://deb.debian.org/debian trixie/main amd64 autoconf all 2.71-3 [332 kB] Get: 13 http://deb.debian.org/debian trixie/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get: 14 http://deb.debian.org/debian trixie/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get: 15 http://deb.debian.org/debian trixie/main amd64 autopoint all 0.21-14 [496 kB] Get: 16 http://deb.debian.org/debian trixie/main amd64 libdebhelper-perl all 13.15.3 [88.0 kB] Get: 17 http://deb.debian.org/debian trixie/main amd64 libtool all 2.4.7-7 [517 kB] Get: 18 http://deb.debian.org/debian trixie/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 19 http://deb.debian.org/debian trixie/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 20 http://deb.debian.org/debian trixie/main amd64 libsub-override-perl all 0.10-1 [10.6 kB] Get: 21 http://deb.debian.org/debian trixie/main amd64 libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get: 22 http://deb.debian.org/debian trixie/main amd64 dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get: 23 http://deb.debian.org/debian trixie/main amd64 libelf1t64 amd64 0.191-1+b1 [189 kB] Get: 24 http://deb.debian.org/debian trixie/main amd64 dwz amd64 0.15-1+b1 [110 kB] Get: 25 http://deb.debian.org/debian trixie/main amd64 libicu72 amd64 72.1-4+b1 [9395 kB] Get: 26 http://deb.debian.org/debian trixie/main amd64 libxml2 amd64 2.9.14+dfsg-1.3+b3 [692 kB] Get: 27 http://deb.debian.org/debian trixie/main amd64 gettext amd64 0.21-14+b1 [1301 kB] Get: 28 http://deb.debian.org/debian trixie/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 29 http://deb.debian.org/debian trixie/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 30 http://deb.debian.org/debian trixie/main amd64 debhelper all 13.15.3 [901 kB] Get: 31 http://deb.debian.org/debian trixie/main amd64 libmodule-build-perl all 0.423400-2 [252 kB] Fetched 19.3 MB in 1s (25.1 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19901 files and directories currently installed.) Preparing to unpack .../00-sensible-utils_0.0.22_all.deb ... Unpacking sensible-utils (0.0.22) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../01-libmagic-mgc_1%3a5.45-2+b1_amd64.deb ... Unpacking libmagic-mgc (1:5.45-2+b1) ... Selecting previously unselected package libmagic1:amd64. Preparing to unpack .../02-libmagic1_1%3a5.45-2+b1_amd64.deb ... Unpacking libmagic1:amd64 (1:5.45-2+b1) ... Selecting previously unselected package file. Preparing to unpack .../03-file_1%3a5.45-2+b1_amd64.deb ... Unpacking file (1:5.45-2+b1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../04-gettext-base_0.21-14+b1_amd64.deb ... Unpacking gettext-base (0.21-14+b1) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../05-libuchardet0_0.0.8-1+b1_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.8-1+b1) ... Selecting previously unselected package groff-base. Preparing to unpack .../06-groff-base_1.23.0-3+b1_amd64.deb ... Unpacking groff-base (1.23.0-3+b1) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../07-bsdextrautils_2.39.3-6_amd64.deb ... Unpacking bsdextrautils (2.39.3-6) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../08-libpipeline1_1.5.7-2_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.7-2) ... Selecting previously unselected package man-db. Preparing to unpack .../09-man-db_2.12.0-3_amd64.deb ... Unpacking man-db (2.12.0-3) ... Selecting previously unselected package m4. Preparing to unpack .../10-m4_1.4.19-4_amd64.deb ... Unpacking m4 (1.4.19-4) ... Selecting previously unselected package autoconf. Preparing to unpack .../11-autoconf_2.71-3_all.deb ... Unpacking autoconf (2.71-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../12-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../13-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../14-autopoint_0.21-14_all.deb ... Unpacking autopoint (0.21-14) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../15-libdebhelper-perl_13.15.3_all.deb ... Unpacking libdebhelper-perl (13.15.3) ... Selecting previously unselected package libtool. Preparing to unpack .../16-libtool_2.4.7-7_all.deb ... Unpacking libtool (2.4.7-7) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../17-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../18-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libsub-override-perl. Preparing to unpack .../19-libsub-override-perl_0.10-1_all.deb ... Unpacking libsub-override-perl (0.10-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../20-libfile-stripnondeterminism-perl_1.13.1-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.13.1-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../21-dh-strip-nondeterminism_1.13.1-1_all.deb ... Unpacking dh-strip-nondeterminism (1.13.1-1) ... Selecting previously unselected package libelf1t64:amd64. Preparing to unpack .../22-libelf1t64_0.191-1+b1_amd64.deb ... Unpacking libelf1t64:amd64 (0.191-1+b1) ... Selecting previously unselected package dwz. Preparing to unpack .../23-dwz_0.15-1+b1_amd64.deb ... Unpacking dwz (0.15-1+b1) ... Selecting previously unselected package libicu72:amd64. Preparing to unpack .../24-libicu72_72.1-4+b1_amd64.deb ... Unpacking libicu72:amd64 (72.1-4+b1) ... Selecting previously unselected package libxml2:amd64. Preparing to unpack .../25-libxml2_2.9.14+dfsg-1.3+b3_amd64.deb ... Unpacking libxml2:amd64 (2.9.14+dfsg-1.3+b3) ... Selecting previously unselected package gettext. Preparing to unpack .../26-gettext_0.21-14+b1_amd64.deb ... Unpacking gettext (0.21-14+b1) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../27-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../28-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../29-debhelper_13.15.3_all.deb ... Unpacking debhelper (13.15.3) ... Selecting previously unselected package libmodule-build-perl. Preparing to unpack .../30-libmodule-build-perl_0.423400-2_all.deb ... Adding 'diversion of /usr/bin/config_data to /usr/bin/config_data.diverted by libmodule-build-perl' Adding 'diversion of /usr/share/man/man1/config_data.1.gz to /usr/share/man/man1/config_data.diverted.1.gz by libmodule-build-perl' Unpacking libmodule-build-perl (0.423400-2) ... Setting up libpipeline1:amd64 (1.5.7-2) ... Setting up libicu72:amd64 (72.1-4+b1) ... Setting up bsdextrautils (2.39.3-6) ... Setting up libmagic-mgc (1:5.45-2+b1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.15.3) ... Setting up libmagic1:amd64 (1:5.45-2+b1) ... Setting up gettext-base (0.21-14+b1) ... Setting up m4 (1.4.19-4) ... Setting up file (1:5.45-2+b1) ... Setting up libelf1t64:amd64 (0.191-1+b1) ... Setting up libmodule-build-perl (0.423400-2) ... Setting up autotools-dev (20220109.1) ... Setting up autopoint (0.21-14) ... Setting up autoconf (2.71-3) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.22) ... Setting up libuchardet0:amd64 (0.0.8-1+b1) ... Setting up libsub-override-perl (0.10-1) ... Setting up libxml2:amd64 (2.9.14+dfsg-1.3+b3) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.13.1-1) ... Setting up gettext (0.21-14+b1) ... Setting up libtool (2.4.7-7) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up dh-strip-nondeterminism (1.13.1-1) ... Setting up groff-base (1.23.0-3+b1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.12.0-3) ... Not building database; man-db/auto-update is not 'true'. Setting up debhelper (13.15.3) ... Processing triggers for libc-bin (2.37-18) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/librg-utils-perl-1.0.43/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../librg-utils-perl_1.0.43-8_source.changes dpkg-buildpackage: info: source package librg-utils-perl dpkg-buildpackage: info: source version 1.0.43-8 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean debian/rules override_dh_auto_clean make[1]: Entering directory '/build/reproducible-path/librg-utils-perl-1.0.43' dh_auto_clean if [ -f Makefile ] ; then make distclean ; fi make[1]: Leaving directory '/build/reproducible-path/librg-utils-perl-1.0.43' dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf Makefile.am:27: warning: '%'-style pattern rules are a GNU make extension dh_auto_configure ./configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/x86_64-linux-gnu --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a race-free mkdir -p... /usr/bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating Build.PL config.status: creating librg-utils-perl.spec config.status: creating lib/Makefile config.status: creating lib/RG/Makefile config.status: creating lib/RG/Utils/Makefile config.status: creating mat/Makefile dh_auto_build make -j20 make[1]: Entering directory '/build/reproducible-path/librg-utils-perl-1.0.43' Making all in lib make[2]: Entering directory '/build/reproducible-path/librg-utils-perl-1.0.43/lib' Making all in RG make[3]: Entering directory '/build/reproducible-path/librg-utils-perl-1.0.43/lib/RG' Making all in Utils make[4]: Entering directory '/build/reproducible-path/librg-utils-perl-1.0.43/lib/RG/Utils' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/build/reproducible-path/librg-utils-perl-1.0.43/lib/RG/Utils' make[4]: Entering directory '/build/reproducible-path/librg-utils-perl-1.0.43/lib/RG' make[4]: Nothing to be done for 'all-am'. make[4]: Leaving directory '/build/reproducible-path/librg-utils-perl-1.0.43/lib/RG' make[3]: Leaving directory '/build/reproducible-path/librg-utils-perl-1.0.43/lib/RG' make[3]: Entering directory '/build/reproducible-path/librg-utils-perl-1.0.43/lib' make[3]: Nothing to be done for 'all-am'. make[3]: Leaving directory '/build/reproducible-path/librg-utils-perl-1.0.43/lib' make[2]: Leaving directory '/build/reproducible-path/librg-utils-perl-1.0.43/lib' Making all in mat make[2]: Entering directory '/build/reproducible-path/librg-utils-perl-1.0.43/mat' make[2]: Nothing to be done for 'all'. make[2]: Leaving directory '/build/reproducible-path/librg-utils-perl-1.0.43/mat' make[2]: Entering directory '/build/reproducible-path/librg-utils-perl-1.0.43' sed -e 's|__pkgdatadir__|/usr/share/librg-utils-perl|g;s|__sysconfdir__|/etc|g;s|__bindir__|/usr/bin|g;s|__VERSION__|1.0.43|g' "dbSwiss" | \ pod2man -c 'User Commands' -r "1.0.43" -name DBSWISS > "dbSwiss.1" perl Build.PL installdirs=vendor && perl Build manifest && perl Build && touch build-stamp Can't find dist packages without a MANIFEST file Run 'Build manifest' to generate one WARNING: Possible missing or corrupt 'MANIFEST' file. Nothing to enter for 'provides' field in metafile. Created MYMETA.yml and MYMETA.json Creating new 'Build' script for 'librg-utils-perl' version '1.0.43' File 'MANIFEST.SKIP' does not exist: Creating a temporary 'MANIFEST.SKIP' Added to MANIFEST: .pc/.quilt_patches Added to MANIFEST: .pc/.quilt_series Added to MANIFEST: .pc/.version Added to MANIFEST: .pc/applied-patches Added to MANIFEST: .pc/remove-defined-for-arrays.patch/lib/RG/Utils/Conv_hssp2saf.pm Added to MANIFEST: .pc/remove-defined-for-arrays.patch/lib/RG/Utils/Copf.pm Added to MANIFEST: .pc/remove-defined-for-arrays.patch/lib/RG/Utils/Hssp_filter.pm Added to MANIFEST: aclocal.m4 Added to MANIFEST: AUTHORS Added to MANIFEST: autom4te.cache/output.0 Added to MANIFEST: autom4te.cache/output.1 Added to MANIFEST: autom4te.cache/output.2 Added to MANIFEST: autom4te.cache/requests Added to MANIFEST: autom4te.cache/traces.0 Added to MANIFEST: autom4te.cache/traces.1 Added to MANIFEST: autom4te.cache/traces.2 Added to MANIFEST: blast2saf.pl Added to MANIFEST: blastpgp_to_saf.pl Added to MANIFEST: Build.PL Added to MANIFEST: Build.PL.in Added to MANIFEST: ChangeLog Added to MANIFEST: config.log Added to MANIFEST: config.status Added to MANIFEST: configure Added to MANIFEST: configure.ac Added to MANIFEST: conv_hssp2saf.pl Added to MANIFEST: copf.pl Added to MANIFEST: COPYING Added to MANIFEST: dbSwiss Added to MANIFEST: dbSwiss.1 Added to MANIFEST: debian/autoreconf.after Added to MANIFEST: debian/autoreconf.before Added to MANIFEST: debian/changelog Added to MANIFEST: debian/control Added to MANIFEST: debian/copyright Added to MANIFEST: debian/patches/remove-defined-for-arrays.patch Added to MANIFEST: debian/patches/series Added to MANIFEST: debian/README.Debian Added to MANIFEST: debian/rules Added to MANIFEST: debian/salsa-ci.yml Added to MANIFEST: debian/source/format Added to MANIFEST: debian/upstream/metadata Added to MANIFEST: debian/watch Added to MANIFEST: hssp_filter.pl Added to MANIFEST: INSTALL Added to MANIFEST: install-sh Added to MANIFEST: lib/Makefile.am Added to MANIFEST: lib/Makefile.in Added to MANIFEST: lib/RG/Makefile.am Added to MANIFEST: lib/RG/Makefile.in Added to MANIFEST: lib/RG/Utils/Conv_hssp2saf.pm Added to MANIFEST: lib/RG/Utils/Copf.pm Added to MANIFEST: lib/RG/Utils/Hssp_filter.pm Added to MANIFEST: lib/RG/Utils/Makefile.am Added to MANIFEST: lib/RG/Utils/Makefile.in Added to MANIFEST: librg-utils-perl.spec Added to MANIFEST: librg-utils-perl.spec.in Added to MANIFEST: Makefile.am Added to MANIFEST: Makefile.in Added to MANIFEST: MANIFEST Added to MANIFEST: mat/Blast_blosum62.metric Added to MANIFEST: mat/Makefile.am Added to MANIFEST: mat/Makefile.in Added to MANIFEST: mat/Maxhom_Blosum.metric Added to MANIFEST: mat/Maxhom_GCG.metric Added to MANIFEST: mat/Maxhom_McLachlan.metric Added to MANIFEST: mat/Maxhom_Sec_Struc.metric Added to MANIFEST: mat/Maxhom_Struc_IO.metric Added to MANIFEST: missing Added to MANIFEST: NEWS Added to MANIFEST: README Added to MANIFEST: safFilterRed.pl Building librg-utils-perl make[2]: Leaving directory '/build/reproducible-path/librg-utils-perl-1.0.43' make[1]: Leaving directory '/build/reproducible-path/librg-utils-perl-1.0.43' dh_auto_test make -j20 check "TESTSUITEFLAGS=-j20 --verbose" VERBOSE=1 make[1]: Entering directory '/build/reproducible-path/librg-utils-perl-1.0.43' Making check in lib make[2]: Entering directory '/build/reproducible-path/librg-utils-perl-1.0.43/lib' Making check in RG make[3]: Entering directory '/build/reproducible-path/librg-utils-perl-1.0.43/lib/RG' Making check in Utils make[4]: Entering directory '/build/reproducible-path/librg-utils-perl-1.0.43/lib/RG/Utils' make[4]: Nothing to be done for 'check'. make[4]: Leaving directory '/build/reproducible-path/librg-utils-perl-1.0.43/lib/RG/Utils' make[4]: Entering directory '/build/reproducible-path/librg-utils-perl-1.0.43/lib/RG' make[4]: Nothing to be done for 'check-am'. make[4]: Leaving directory '/build/reproducible-path/librg-utils-perl-1.0.43/lib/RG' make[3]: Leaving directory '/build/reproducible-path/librg-utils-perl-1.0.43/lib/RG' make[3]: Entering directory '/build/reproducible-path/librg-utils-perl-1.0.43/lib' make[3]: Nothing to be done for 'check-am'. make[3]: Leaving directory '/build/reproducible-path/librg-utils-perl-1.0.43/lib' make[2]: Leaving directory '/build/reproducible-path/librg-utils-perl-1.0.43/lib' Making check in mat make[2]: Entering directory '/build/reproducible-path/librg-utils-perl-1.0.43/mat' make[2]: Nothing to be done for 'check'. make[2]: Leaving directory '/build/reproducible-path/librg-utils-perl-1.0.43/mat' make[2]: Entering directory '/build/reproducible-path/librg-utils-perl-1.0.43' make[2]: Nothing to be done for 'check-am'. make[2]: Leaving directory '/build/reproducible-path/librg-utils-perl-1.0.43' make[1]: Leaving directory '/build/reproducible-path/librg-utils-perl-1.0.43' create-stamp debian/debhelper-build-stamp dh_prep debian/rules override_dh_auto_install make[1]: Entering directory '/build/reproducible-path/librg-utils-perl-1.0.43' /usr/bin/make DESTDIR=/build/reproducible-path/librg-utils-perl-1.0.43/debian/librg-utils-perl install make[2]: Entering directory '/build/reproducible-path/librg-utils-perl-1.0.43' Making install in lib make[3]: Entering directory '/build/reproducible-path/librg-utils-perl-1.0.43/lib' Making install in RG make[4]: Entering directory '/build/reproducible-path/librg-utils-perl-1.0.43/lib/RG' Making install in Utils make[5]: Entering directory '/build/reproducible-path/librg-utils-perl-1.0.43/lib/RG/Utils' make[6]: Entering directory '/build/reproducible-path/librg-utils-perl-1.0.43/lib/RG/Utils' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/build/reproducible-path/librg-utils-perl-1.0.43/lib/RG/Utils' make[5]: Leaving directory '/build/reproducible-path/librg-utils-perl-1.0.43/lib/RG/Utils' make[5]: Entering directory '/build/reproducible-path/librg-utils-perl-1.0.43/lib/RG' make[6]: Entering directory '/build/reproducible-path/librg-utils-perl-1.0.43/lib/RG' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/build/reproducible-path/librg-utils-perl-1.0.43/lib/RG' make[5]: Leaving directory '/build/reproducible-path/librg-utils-perl-1.0.43/lib/RG' make[4]: Leaving directory '/build/reproducible-path/librg-utils-perl-1.0.43/lib/RG' make[4]: Entering directory '/build/reproducible-path/librg-utils-perl-1.0.43/lib' make[5]: Entering directory '/build/reproducible-path/librg-utils-perl-1.0.43/lib' make[5]: Nothing to be done for 'install-exec-am'. make[5]: Nothing to be done for 'install-data-am'. make[5]: Leaving directory '/build/reproducible-path/librg-utils-perl-1.0.43/lib' make[4]: Leaving directory '/build/reproducible-path/librg-utils-perl-1.0.43/lib' make[3]: Leaving directory '/build/reproducible-path/librg-utils-perl-1.0.43/lib' Making install in mat make[3]: Entering directory '/build/reproducible-path/librg-utils-perl-1.0.43/mat' make[4]: Entering directory '/build/reproducible-path/librg-utils-perl-1.0.43/mat' make[4]: Nothing to be done for 'install-exec-am'. /usr/bin/mkdir -p '/build/reproducible-path/librg-utils-perl-1.0.43/debian/librg-utils-perl/usr/share/librg-utils-perl/mat' /usr/bin/install -c -m 644 ./Blast_blosum62.metric ./Maxhom_Blosum.metric ./Maxhom_GCG.metric ./Maxhom_McLachlan.metric ./Maxhom_Sec_Struc.metric ./Maxhom_Struc_IO.metric '/build/reproducible-path/librg-utils-perl-1.0.43/debian/librg-utils-perl/usr/share/librg-utils-perl/mat' make[4]: Leaving directory '/build/reproducible-path/librg-utils-perl-1.0.43/mat' make[3]: Leaving directory '/build/reproducible-path/librg-utils-perl-1.0.43/mat' make[3]: Entering directory '/build/reproducible-path/librg-utils-perl-1.0.43' make[4]: Entering directory '/build/reproducible-path/librg-utils-perl-1.0.43' make[4]: Nothing to be done for 'install-exec-am'. perl Build install destdir=/build/reproducible-path/librg-utils-perl-1.0.43/debian/librg-utils-perl create_packlist=0 Building librg-utils-perl Installing /build/reproducible-path/librg-utils-perl-1.0.43/debian/librg-utils-perl/usr/share/perl5/RG/Utils/Conv_hssp2saf.pm Installing /build/reproducible-path/librg-utils-perl-1.0.43/debian/librg-utils-perl/usr/share/perl5/RG/Utils/Hssp_filter.pm Installing /build/reproducible-path/librg-utils-perl-1.0.43/debian/librg-utils-perl/usr/share/perl5/RG/Utils/Copf.pm Installing /build/reproducible-path/librg-utils-perl-1.0.43/debian/librg-utils-perl/usr/share/man/man3/RG::Utils::Conv_hssp2saf.3pm Installing /build/reproducible-path/librg-utils-perl-1.0.43/debian/librg-utils-perl/usr/share/man/man3/RG::Utils::Hssp_filter.3pm Installing /build/reproducible-path/librg-utils-perl-1.0.43/debian/librg-utils-perl/usr/share/man/man3/RG::Utils::Copf.3pm /usr/bin/mkdir -p '/build/reproducible-path/librg-utils-perl-1.0.43/debian/librg-utils-perl/usr/share/librg-utils-perl' /usr/bin/install -c blast2saf.pl blastpgp_to_saf.pl conv_hssp2saf.pl copf.pl dbSwiss hssp_filter.pl safFilterRed.pl '/build/reproducible-path/librg-utils-perl-1.0.43/debian/librg-utils-perl/usr/share/librg-utils-perl' /usr/bin/mkdir -p '/build/reproducible-path/librg-utils-perl-1.0.43/debian/librg-utils-perl/usr/share/man/man1' /usr/bin/install -c -m 644 dbSwiss.1 '/build/reproducible-path/librg-utils-perl-1.0.43/debian/librg-utils-perl/usr/share/man/man1' /usr/bin/mkdir -p '/build/reproducible-path/librg-utils-perl-1.0.43/debian/librg-utils-perl/usr/share/man/man3' /usr/bin/make install-data-hook make[5]: Entering directory '/build/reproducible-path/librg-utils-perl-1.0.43' for f in "/build/reproducible-path/librg-utils-perl-1.0.43/debian/librg-utils-perl/usr/share/librg-utils-perl/copf.pl" "/build/reproducible-path/librg-utils-perl-1.0.43/debian/librg-utils-perl/usr/share/librg-utils-perl/hssp_filter.pl"; do \ sed -i -e 's|__bindir__|/usr/bin|g;s|__datadir__|/usr/share|g;s|__docdir__|/usr/share/doc/librg-utils-perl|g;s|__pkgdatadir__|/usr/share/librg-utils-perl|g;s|__PREFIX__|/usr|g;s|__sysconfdir__|/etc|g;s|__VERSION__|1.0.43|g;' "$f"; \ done make[5]: Leaving directory '/build/reproducible-path/librg-utils-perl-1.0.43' make[4]: Leaving directory '/build/reproducible-path/librg-utils-perl-1.0.43' make[3]: Leaving directory '/build/reproducible-path/librg-utils-perl-1.0.43' make[2]: Leaving directory '/build/reproducible-path/librg-utils-perl-1.0.43' make[1]: Leaving directory '/build/reproducible-path/librg-utils-perl-1.0.43' dh_installdocs dh_installchangelogs dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'librg-utils-perl' in '../librg-utils-perl_1.0.43-8_all.deb'. dpkg-genbuildinfo --build=binary -O../librg-utils-perl_1.0.43-8_amd64.buildinfo dpkg-genchanges --build=binary -O../librg-utils-perl_1.0.43-8_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/3986625 and its subdirectories I: Current time: Sun Apr 28 21:51:23 -12 2024 I: pbuilder-time-stamp: 1714384283 Mon Apr 29 09:51:24 UTC 2024 I: 1st build successful. Starting 2nd build on remote node ionos5-amd64.debian.net. Mon Apr 29 09:51:24 UTC 2024 I: Preparing to do remote build '2' on ionos5-amd64.debian.net. Mon Apr 29 09:52:17 UTC 2024 I: Deleting $TMPDIR on ionos5-amd64.debian.net. Mon Apr 29 09:52:17 UTC 2024 I: librg-utils-perl_1.0.43-8_amd64.changes: Format: 1.8 Date: Wed, 19 Jan 2022 21:16:48 +0100 Source: librg-utils-perl Binary: librg-utils-perl Architecture: all Version: 1.0.43-8 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: librg-utils-perl - parsers and format conversion utilities used by (e.g.) profphd Changes: librg-utils-perl (1.0.43-8) unstable; urgency=medium . * Upstream download vanished * Standards-Version: 4.6.0 (routine-update) * Add missing build dependency on dh addon. Checksums-Sha1: 66d706c82106e0a3434e7a73cc1150cf662f3b47 107360 librg-utils-perl_1.0.43-8_all.deb 1f36f2afe79561dff5681e2a5e224bb3f5760bda 4956 librg-utils-perl_1.0.43-8_amd64.buildinfo Checksums-Sha256: a5f7c1e3f4ee0fb09accdc1e67b0faec7f6432ad3f5906e82cbff7443b277886 107360 librg-utils-perl_1.0.43-8_all.deb b761919bdbd08828097661343d2bc39f7a7bf420bd120dae92232034f1eaaae6 4956 librg-utils-perl_1.0.43-8_amd64.buildinfo Files: eae074dfc8ef346bc5c21d3e7e15c7cd 107360 perl optional librg-utils-perl_1.0.43-8_all.deb e5ae7e9242ce4bd7ba806a9bcedaab6b 4956 perl optional librg-utils-perl_1.0.43-8_amd64.buildinfo Mon Apr 29 09:52:18 UTC 2024 I: diffoscope 265 will be used to compare the two builds: Running as unit: rb-diffoscope-amd64_13-5552.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.6mMUlspo/librg-utils-perl_1.0.43-8.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.6mMUlspo/librg-utils-perl_1.0.43-8.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.6mMUlspo/librg-utils-perl_1.0.43-8.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.6mMUlspo/b1/librg-utils-perl_1.0.43-8_amd64.changes /srv/reproducible-results/rbuild-debian/r-b-build.6mMUlspo/b2/librg-utils-perl_1.0.43-8_amd64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.341s) 0.341s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.015s) 0.015s 12 calls diffoscope.comparators.binary.FilesystemFile ## specialize (total time: 0.000s) 0.000s 1 call specialize Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 660ms CPU time consumed: 658ms Mon Apr 29 09:52:19 UTC 2024 I: diffoscope 265 found no differences in the changes files, and a .buildinfo file also exists. Mon Apr 29 09:52:19 UTC 2024 I: librg-utils-perl from trixie built successfully and reproducibly on amd64. Mon Apr 29 09:52:21 UTC 2024 I: Submitting .buildinfo files to external archives: Mon Apr 29 09:52:21 UTC 2024 I: Submitting 8.0K b1/librg-utils-perl_1.0.43-8_amd64.buildinfo.asc Mon Apr 29 09:52:23 UTC 2024 I: Submitting 8.0K b2/librg-utils-perl_1.0.43-8_amd64.buildinfo.asc Mon Apr 29 09:52:24 UTC 2024 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Mon Apr 29 09:52:24 UTC 2024 I: Done submitting .buildinfo files. Mon Apr 29 09:52:24 UTC 2024 I: Removing signed librg-utils-perl_1.0.43-8_amd64.buildinfo.asc files: removed './b1/librg-utils-perl_1.0.43-8_amd64.buildinfo.asc' removed './b2/librg-utils-perl_1.0.43-8_amd64.buildinfo.asc'