Sat May 4 09:54:46 UTC 2024 I: starting to build lastz/trixie/amd64 on jenkins on '2024-05-04 09:54' Sat May 4 09:54:46 UTC 2024 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/amd64_16/18978/console.log Sat May 4 09:54:46 UTC 2024 I: Downloading source for trixie/lastz=1.04.22-2 --2024-05-04 09:54:46-- http://deb.debian.org/debian/pool/main/l/lastz/lastz_1.04.22-2.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2025 (2.0K) [text/prs.lines.tag] Saving to: ‘lastz_1.04.22-2.dsc’ 0K . 100% 287M=0s 2024-05-04 09:54:46 (287 MB/s) - ‘lastz_1.04.22-2.dsc’ saved [2025/2025] Sat May 4 09:54:46 UTC 2024 I: lastz_1.04.22-2.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: lastz Binary: lastz, lastz-examples Architecture: any all Version: 1.04.22-2 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille Homepage: https://github.com/lastz/lastz Standards-Version: 4.6.1 Vcs-Browser: https://salsa.debian.org/med-team/lastz Vcs-Git: https://salsa.debian.org/med-team/lastz.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13), dh-python, python3 Package-List: lastz deb science optional arch=any lastz-examples deb science optional arch=all Checksums-Sha1: f08e55a29fc8b5443d5c37570990260bfe976a35 5367940 lastz_1.04.22.orig.tar.gz f87d1dc400a6d516f36de9465659df7bafb0888a 9220 lastz_1.04.22-2.debian.tar.xz Checksums-Sha256: 4c829603ba4aed7ddf64255b528cd88850e4557382fca29580d3576c25c5054a 5367940 lastz_1.04.22.orig.tar.gz b199838aeb529e1ba388dee38bf4b52386ecdb56023b7b6246d0a99b8cd262d8 9220 lastz_1.04.22-2.debian.tar.xz Files: 13c180933359b2472a6c32744f912dfc 5367940 lastz_1.04.22.orig.tar.gz 15c148fd9fcd646a65d0fe23ec45ac6e 9220 lastz_1.04.22-2.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCgAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAmN3bGARHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtETdg/9G8sCpH1e1ibU1Z1kRaQRJxKhOy1o0y51 2C3uiXTNmyf3cRrKCNLqLVMDg8R3SqshuTWwiuEjDQDophuBCpHWc7FRlsV2KorQ 5IOTbDH5VXEbu8Hjv/Eisz1WJqnC1QCRNdBJUydNWQgiFqk8kZKKMrFlrJlYwkiA tOZjANJyxZc02YpgyujLgyc2e/dlPC7eMVP7pCqEvhj5Zxs358e4xpnDtc58SHPp 4wM+mPZayzfv9+C/2q1nN3sq7i+P7pTGubkuRiscqf3G/M3/OT+t23OIt4emc9mX dIDniyp7I2dXw5h925LH5dXtBwaizGK1gCYx58ezpE9/wVfPtmOEgQuZWBvgijSH 8BYML7n9KZ78ZHIa7jDb453oEcBsV0eD5tkxeUXP5gO2V9djKXBZzwMZ8JX45GeZ VhxfppMs7R9vWoKdawTcD6F+Rv64SzrDB+z/gdTwYFWM0y/PFfYACMTBtEVRdUnk WITtVSJe7j9OK4WojkrCV4BAr2k1wY+kkt0mpnmlSPu5tEMtKxKh3zclDXN0F2u9 Yk+mH9qHt5vBUswdypwN4Vrty9/0ezFVEWQA+6TJfbV2nEQfhyMpw8SIPMz4k7U5 m3IVTfNx8nNnF2mcLVtGP3jZzg7Tu6uBaff8VeYTSy0ys1sLewu06Hr/khA9GmiI eZmLsZY8GGA= =Pgbq -----END PGP SIGNATURE----- Sat May 4 09:54:46 UTC 2024 I: Checking whether the package is not for us Sat May 4 09:54:46 UTC 2024 I: Starting 1st build on remote node ionos15-amd64.debian.net. Sat May 4 09:54:46 UTC 2024 I: Preparing to do remote build '1' on ionos15-amd64.debian.net. Sat May 4 09:55:59 UTC 2024 I: Deleting $TMPDIR on ionos15-amd64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Fri Jun 6 04:17:49 -12 2025 I: pbuilder-time-stamp: 1749226669 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [lastz_1.04.22-2.dsc] I: copying [./lastz_1.04.22.orig.tar.gz] I: copying [./lastz_1.04.22-2.debian.tar.xz] I: Extracting source gpgv: Signature made Fri Nov 18 11:28:32 2022 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./lastz_1.04.22-2.dsc: no acceptable signature found dpkg-source: info: extracting lastz in lastz-1.04.22 dpkg-source: info: unpacking lastz_1.04.22.orig.tar.gz dpkg-source: info: unpacking lastz_1.04.22-2.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying propagate_cflags.patch dpkg-source: info: applying fix_signed_char.patch dpkg-source: info: applying spelling.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/690335/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='amd64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=42 ' DISTRIBUTION='trixie' HOME='/root' HOST_ARCH='amd64' IFS=' ' INVOCATION_ID='39a1f197eb6044418859eb678d918dca' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='690335' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.s8ED8CEf/pbuilderrc_H9LE --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.s8ED8CEf/b1 --logfile b1/build.log lastz_1.04.22-2.dsc' SUDO_GID='111' SUDO_UID='106' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://213.165.73.152:3128' I: uname -a Linux ionos15-amd64 6.6.13+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.6.13-1~bpo12+1 (2024-02-15) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Jun 5 14:46 /bin -> usr/bin I: user script /srv/workspace/pbuilder/690335/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-python, python3 dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19695 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-python; however: Package dh-python is not installed. pbuilder-satisfydepends-dummy depends on python3; however: Package python3 is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libdebhelper-perl{a} libelf1t64{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libicu72{a} libmagic-mgc{a} libmagic1t64{a} libpipeline1{a} libpython3-stdlib{a} libpython3.11-minimal{a} libpython3.11-stdlib{a} libreadline8t64{a} libsub-override-perl{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} media-types{a} netbase{a} po-debconf{a} python3{a} python3-distutils{a} python3-lib2to3{a} python3-minimal{a} python3-pkg-resources{a} python3-setuptools{a} python3.11{a} python3.11-minimal{a} readline-common{a} sensible-utils{a} tzdata{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 48 newly installed, 0 to remove and 0 not upgraded. Need to get 25.9 MB of archives. After unpacking 103 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main amd64 libpython3.11-minimal amd64 3.11.9-1 [817 kB] Get: 2 http://deb.debian.org/debian trixie/main amd64 libexpat1 amd64 2.6.2-1 [103 kB] Get: 3 http://deb.debian.org/debian trixie/main amd64 python3.11-minimal amd64 3.11.9-1 [1879 kB] Get: 4 http://deb.debian.org/debian trixie/main amd64 python3-minimal amd64 3.11.8-1 [26.3 kB] Get: 5 http://deb.debian.org/debian trixie/main amd64 media-types all 10.1.0 [26.9 kB] Get: 6 http://deb.debian.org/debian trixie/main amd64 netbase all 6.4 [12.8 kB] Get: 7 http://deb.debian.org/debian trixie/main amd64 tzdata all 2024a-3 [255 kB] Get: 8 http://deb.debian.org/debian trixie/main amd64 readline-common all 8.2-4 [69.3 kB] Get: 9 http://deb.debian.org/debian trixie/main amd64 libreadline8t64 amd64 8.2-4 [167 kB] Get: 10 http://deb.debian.org/debian trixie/main amd64 libpython3.11-stdlib amd64 3.11.9-1 [1792 kB] Get: 11 http://deb.debian.org/debian trixie/main amd64 python3.11 amd64 3.11.9-1 [602 kB] Get: 12 http://deb.debian.org/debian trixie/main amd64 libpython3-stdlib amd64 3.11.8-1 [9332 B] Get: 13 http://deb.debian.org/debian trixie/main amd64 python3 amd64 3.11.8-1 [27.4 kB] Get: 14 http://deb.debian.org/debian trixie/main amd64 sensible-utils all 0.0.22 [22.4 kB] Get: 15 http://deb.debian.org/debian trixie/main amd64 libmagic-mgc amd64 1:5.45-3 [314 kB] Get: 16 http://deb.debian.org/debian trixie/main amd64 libmagic1t64 amd64 1:5.45-3 [105 kB] Get: 17 http://deb.debian.org/debian trixie/main amd64 file amd64 1:5.45-3 [42.9 kB] Get: 18 http://deb.debian.org/debian trixie/main amd64 gettext-base amd64 0.21-14+b1 [161 kB] Get: 19 http://deb.debian.org/debian trixie/main amd64 libuchardet0 amd64 0.0.8-1+b1 [68.8 kB] Get: 20 http://deb.debian.org/debian trixie/main amd64 groff-base amd64 1.23.0-3+b1 [1180 kB] Get: 21 http://deb.debian.org/debian trixie/main amd64 bsdextrautils amd64 2.40-8 [92.8 kB] Get: 22 http://deb.debian.org/debian trixie/main amd64 libpipeline1 amd64 1.5.7-2 [38.0 kB] Get: 23 http://deb.debian.org/debian trixie/main amd64 man-db amd64 2.12.1-1 [1411 kB] Get: 24 http://deb.debian.org/debian trixie/main amd64 m4 amd64 1.4.19-4 [287 kB] Get: 25 http://deb.debian.org/debian trixie/main amd64 autoconf all 2.71-3 [332 kB] Get: 26 http://deb.debian.org/debian trixie/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get: 27 http://deb.debian.org/debian trixie/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get: 28 http://deb.debian.org/debian trixie/main amd64 autopoint all 0.21-14 [496 kB] Get: 29 http://deb.debian.org/debian trixie/main amd64 libdebhelper-perl all 13.15.3 [88.0 kB] Get: 30 http://deb.debian.org/debian trixie/main amd64 libtool all 2.4.7-7 [517 kB] Get: 31 http://deb.debian.org/debian trixie/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 32 http://deb.debian.org/debian trixie/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 33 http://deb.debian.org/debian trixie/main amd64 libsub-override-perl all 0.10-1 [10.6 kB] Get: 34 http://deb.debian.org/debian trixie/main amd64 libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get: 35 http://deb.debian.org/debian trixie/main amd64 dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get: 36 http://deb.debian.org/debian trixie/main amd64 libelf1t64 amd64 0.191-1+b1 [189 kB] Get: 37 http://deb.debian.org/debian trixie/main amd64 dwz amd64 0.15-1+b1 [110 kB] Get: 38 http://deb.debian.org/debian trixie/main amd64 libicu72 amd64 72.1-4+b1 [9395 kB] Get: 39 http://deb.debian.org/debian trixie/main amd64 libxml2 amd64 2.9.14+dfsg-1.3+b3 [692 kB] Get: 40 http://deb.debian.org/debian trixie/main amd64 gettext amd64 0.21-14+b1 [1301 kB] Get: 41 http://deb.debian.org/debian trixie/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 42 http://deb.debian.org/debian trixie/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 43 http://deb.debian.org/debian trixie/main amd64 debhelper all 13.15.3 [901 kB] Get: 44 http://deb.debian.org/debian trixie/main amd64 python3-pkg-resources all 68.1.2-2 [241 kB] Get: 45 http://deb.debian.org/debian trixie/main amd64 python3-lib2to3 all 3.12.3-1 [77.6 kB] Get: 46 http://deb.debian.org/debian trixie/main amd64 python3-distutils all 3.12.3-1 [131 kB] Get: 47 http://deb.debian.org/debian trixie/main amd64 python3-setuptools all 68.1.2-2 [468 kB] Get: 48 http://deb.debian.org/debian trixie/main amd64 dh-python all 6.20240422 [107 kB] Fetched 25.9 MB in 1s (49.8 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libpython3.11-minimal:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19695 files and directories currently installed.) Preparing to unpack .../libpython3.11-minimal_3.11.9-1_amd64.deb ... Unpacking libpython3.11-minimal:amd64 (3.11.9-1) ... Selecting previously unselected package libexpat1:amd64. Preparing to unpack .../libexpat1_2.6.2-1_amd64.deb ... Unpacking libexpat1:amd64 (2.6.2-1) ... Selecting previously unselected package python3.11-minimal. Preparing to unpack .../python3.11-minimal_3.11.9-1_amd64.deb ... Unpacking python3.11-minimal (3.11.9-1) ... Setting up libpython3.11-minimal:amd64 (3.11.9-1) ... Setting up libexpat1:amd64 (2.6.2-1) ... Setting up python3.11-minimal (3.11.9-1) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20011 files and directories currently installed.) Preparing to unpack .../0-python3-minimal_3.11.8-1_amd64.deb ... Unpacking python3-minimal (3.11.8-1) ... Selecting previously unselected package media-types. Preparing to unpack .../1-media-types_10.1.0_all.deb ... Unpacking media-types (10.1.0) ... Selecting previously unselected package netbase. Preparing to unpack .../2-netbase_6.4_all.deb ... Unpacking netbase (6.4) ... Selecting previously unselected package tzdata. Preparing to unpack .../3-tzdata_2024a-3_all.deb ... Unpacking tzdata (2024a-3) ... Selecting previously unselected package readline-common. Preparing to unpack .../4-readline-common_8.2-4_all.deb ... Unpacking readline-common (8.2-4) ... Selecting previously unselected package libreadline8t64:amd64. Preparing to unpack .../5-libreadline8t64_8.2-4_amd64.deb ... Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8 to /lib/x86_64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libhistory.so.8.2 to /lib/x86_64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8 to /lib/x86_64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/x86_64-linux-gnu/libreadline.so.8.2 to /lib/x86_64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:amd64 (8.2-4) ... Selecting previously unselected package libpython3.11-stdlib:amd64. Preparing to unpack .../6-libpython3.11-stdlib_3.11.9-1_amd64.deb ... Unpacking libpython3.11-stdlib:amd64 (3.11.9-1) ... Selecting previously unselected package python3.11. Preparing to unpack .../7-python3.11_3.11.9-1_amd64.deb ... Unpacking python3.11 (3.11.9-1) ... Selecting previously unselected package libpython3-stdlib:amd64. Preparing to unpack .../8-libpython3-stdlib_3.11.8-1_amd64.deb ... Unpacking libpython3-stdlib:amd64 (3.11.8-1) ... Setting up python3-minimal (3.11.8-1) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 21003 files and directories currently installed.) Preparing to unpack .../00-python3_3.11.8-1_amd64.deb ... Unpacking python3 (3.11.8-1) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../01-sensible-utils_0.0.22_all.deb ... Unpacking sensible-utils (0.0.22) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../02-libmagic-mgc_1%3a5.45-3_amd64.deb ... Unpacking libmagic-mgc (1:5.45-3) ... Selecting previously unselected package libmagic1t64:amd64. Preparing to unpack .../03-libmagic1t64_1%3a5.45-3_amd64.deb ... Unpacking libmagic1t64:amd64 (1:5.45-3) ... Selecting previously unselected package file. Preparing to unpack .../04-file_1%3a5.45-3_amd64.deb ... Unpacking file (1:5.45-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../05-gettext-base_0.21-14+b1_amd64.deb ... Unpacking gettext-base (0.21-14+b1) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../06-libuchardet0_0.0.8-1+b1_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.8-1+b1) ... Selecting previously unselected package groff-base. Preparing to unpack .../07-groff-base_1.23.0-3+b1_amd64.deb ... Unpacking groff-base (1.23.0-3+b1) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../08-bsdextrautils_2.40-8_amd64.deb ... Unpacking bsdextrautils (2.40-8) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../09-libpipeline1_1.5.7-2_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.7-2) ... Selecting previously unselected package man-db. Preparing to unpack .../10-man-db_2.12.1-1_amd64.deb ... Unpacking man-db (2.12.1-1) ... Selecting previously unselected package m4. Preparing to unpack .../11-m4_1.4.19-4_amd64.deb ... Unpacking m4 (1.4.19-4) ... Selecting previously unselected package autoconf. Preparing to unpack .../12-autoconf_2.71-3_all.deb ... Unpacking autoconf (2.71-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../13-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... 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Setting up libtool (2.4.7-7) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up libreadline8t64:amd64 (8.2-4) ... Setting up dh-strip-nondeterminism (1.13.1-1) ... Setting up groff-base (1.23.0-3+b1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libpython3.11-stdlib:amd64 (3.11.9-1) ... Setting up man-db (2.12.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libpython3-stdlib:amd64 (3.11.8-1) ... Setting up python3.11 (3.11.9-1) ... Setting up debhelper (13.15.3) ... Setting up python3 (3.11.8-1) ... Setting up python3-lib2to3 (3.12.3-1) ... Setting up python3-pkg-resources (68.1.2-2) ... Setting up python3-distutils (3.12.3-1) ... Setting up python3-setuptools (68.1.2-2) ... Setting up dh-python (6.20240422) ... Processing triggers for libc-bin (2.37-19) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/lastz-1.04.22/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../lastz_1.04.22-2_source.changes dpkg-buildpackage: info: source package lastz dpkg-buildpackage: info: source version 1.04.22-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean --with python3 dh_auto_clean make -j42 clean make[1]: Entering directory '/build/reproducible-path/lastz-1.04.22' cd src && make clean make[2]: Entering directory '/build/reproducible-path/lastz-1.04.22/src' rm -f *.o rm -f lastz rm -f ../test_results/base_test*.* rm -f lastz_D rm -f lastz_32 make[2]: Leaving directory '/build/reproducible-path/lastz-1.04.22/src' make[1]: Leaving directory '/build/reproducible-path/lastz-1.04.22' dh_clean debian/rules binary dh binary --with python3 dh_update_autotools_config dh_autoreconf dh_auto_configure dh_auto_build make -j42 "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/reproducible-path/lastz-1.04.22' cd src && make lastz lastz_D make[2]: Entering directory '/build/reproducible-path/lastz-1.04.22/src' gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' lastz.c -o lastz.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' infer_scores.c -o infer_scores.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' seeds.c -o seeds.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' pos_table.c -o pos_table.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' quantum.c -o quantum.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' seed_search.c -o seed_search.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' diag_hash.c -o diag_hash.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' chain.c -o chain.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' gapped_extend.c -o gapped_extend.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' tweener.c -o tweener.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' masking.c -o masking.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' segment.c -o segment.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' edit_script.c -o edit_script.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' identity_dist.c -o identity_dist.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' coverage_dist.c -o coverage_dist.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' continuity_dist.c -o continuity_dist.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' output.c -o output.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' gfa.c -o gfa.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' lav.c -o lav.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' axt.c -o axt.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' maf.c -o maf.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' cigar.c -o cigar.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' sam.c -o sam.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' genpaf.c -o genpaf.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' text_align.c -o text_align.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' align_diffs.c -o align_diffs.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' utilities.c -o utilities.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' dna_utilities.c -o dna_utilities.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' sequences.c -o sequences.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'I\' capsule.c -o capsule.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' lastz.c -o lastz_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' infer_scores.c -o infer_scores_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' seeds.c -o seeds_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' pos_table.c -o pos_table_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' quantum.c -o quantum_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' seed_search.c -o seed_search_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' diag_hash.c -o diag_hash_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' chain.c -o chain_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' gapped_extend.c -o gapped_extend_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' tweener.c -o tweener_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' masking.c -o masking_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' segment.c -o segment_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' edit_script.c -o edit_script_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' identity_dist.c -o identity_dist_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' coverage_dist.c -o coverage_dist_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' continuity_dist.c -o continuity_dist_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' output.c -o output_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' gfa.c -o gfa_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' lav.c -o lav_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' axt.c -o axt_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' maf.c -o maf_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' cigar.c -o cigar_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' sam.c -o sam_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' genpaf.c -o genpaf_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' text_align.c -o text_align_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' align_diffs.c -o align_diffs_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' utilities.c -o utilities_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' dna_utilities.c -o dna_utilities_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' sequences.c -o sequences_D.o gcc -Wdate-time -D_FORTIFY_SOURCE=2 -c -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/lastz-1.04.22=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wno-stringop-truncation -O3 -Wall -Wextra -Werror -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DVERSION_MAJOR="\"1"\" -DVERSION_MINOR="\"04"\" -DVERSION_SUBMINOR="\"22"\" -DREVISION_DATE="\"20220807"\" -DSUBVERSION_REV="\""\" -Dscore_type=\'D\' capsule.c -o capsule_D.o gcc lastz.o infer_scores.o seeds.o pos_table.o quantum.o seed_search.o diag_hash.o chain.o gapped_extend.o tweener.o masking.o segment.o edit_script.o identity_dist.o coverage_dist.o continuity_dist.o output.o gfa.o lav.o axt.o maf.o cigar.o sam.o genpaf.o text_align.o align_diffs.o utilities.o dna_utilities.o sequences.o capsule.o -lm -o lastz -Wl,-z,relro -Wl,-z,now gcc lastz_D.o infer_scores_D.o seeds_D.o pos_table_D.o quantum_D.o seed_search_D.o diag_hash_D.o chain_D.o gapped_extend_D.o tweener_D.o masking_D.o segment_D.o edit_script_D.o identity_dist_D.o coverage_dist_D.o continuity_dist_D.o output_D.o gfa_D.o lav_D.o axt_D.o maf_D.o cigar_D.o sam_D.o genpaf_D.o text_align_D.o align_diffs_D.o utilities_D.o dna_utilities_D.o sequences_D.o capsule_D.o -lm -o lastz_D -Wl,-z,relro -Wl,-z,now make[2]: Leaving directory '/build/reproducible-path/lastz-1.04.22/src' make[1]: Leaving directory '/build/reproducible-path/lastz-1.04.22' debian/rules override_dh_auto_test make[1]: Entering directory '/build/reproducible-path/lastz-1.04.22' /usr/bin/make base_tests make[2]: Entering directory '/build/reproducible-path/lastz-1.04.22' cd src && /usr/bin/make base_tests make[3]: Entering directory '/build/reproducible-path/lastz-1.04.22/src' SUCCESS: ../test_data/base_test.hits.lav and ../test_results/base_test.hits.lav are equivalent SUCCESS: ../test_data/base_test.hsp.lav and ../test_results/base_test.hsp.lav are equivalent SUCCESS: ../test_data/base_test.adaptive_k.gfa and ../test_results/base_test.adaptive_k.gfa are equivalent SUCCESS: ../test_data/base_test.default.lav and ../test_results/base_test.default.lav are equivalent SUCCESS: ../test_data/base_test.default.axt and ../test_results/base_test.default.axt are equivalent SUCCESS: ../test_data/base_test.chained.lav and ../test_results/base_test.chained.lav are equivalent SUCCESS: ../test_data/base_test.extended.lav and ../test_results/base_test.extended.lav are equivalent SUCCESS: ../test_data/base_test.interpolated.lav and ../test_results/base_test.interpolated.lav are equivalent SUCCESS: ../test_data/base_test.default.lav and ../test_results/base_test.segments.lav are equivalent SUCCESS: ../test_data/base_test.hsp.lav and ../test_results/base_test.stdin2.lav are equivalent SUCCESS: ../test_data/base_test.pig_cat.lav and ../test_results/base_test.2bit1.lav are equivalent SUCCESS: ../test_data/base_test.extended.lav and ../test_results/base_test.2bit2.lav are equivalent SUCCESS: ../test_data/base_test.float.lav and ../test_results/base_test.float.lav are equivalent SUCCESS: ../test_data/base_test.seeded.lav and ../test_results/base_test.seeded.lav are equivalent SUCCESS: ../test_data/base_test.hwseeded.lav and ../test_results/base_test.hwseeded.lav are equivalent SUCCESS: ../test_data/base_test.owseeded.gfa and ../test_results/base_test.owseeded.gfa are equivalent SUCCESS: ../test_data/base_test.masking.lav and ../test_results/base_test.masking.lav are equivalent SUCCESS: ../test_data/base_test.subrange.lav and ../test_results/base_test.subrange.lav are equivalent SUCCESS: ../test_data/base_test.mask.lav and ../test_results/base_test.mask.lav are equivalent make[3]: Leaving directory '/build/reproducible-path/lastz-1.04.22/src' make[2]: Leaving directory '/build/reproducible-path/lastz-1.04.22' /usr/bin/make test make[2]: Entering directory '/build/reproducible-path/lastz-1.04.22' cd src && /usr/bin/make test make[3]: Entering directory '/build/reproducible-path/lastz-1.04.22/src' make[3]: Leaving directory '/build/reproducible-path/lastz-1.04.22/src' make[2]: Leaving directory '/build/reproducible-path/lastz-1.04.22' /usr/bin/make clean_test make[2]: Entering directory '/build/reproducible-path/lastz-1.04.22' cd src && /usr/bin/make clean_tests make[3]: Entering directory '/build/reproducible-path/lastz-1.04.22/src' rm -f ../test_results/base_test*.* make[3]: Leaving directory '/build/reproducible-path/lastz-1.04.22/src' make[2]: Leaving directory '/build/reproducible-path/lastz-1.04.22' make[1]: Leaving directory '/build/reproducible-path/lastz-1.04.22' create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install make -j42 install DESTDIR=/build/reproducible-path/lastz-1.04.22/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/reproducible-path/lastz-1.04.22' cd src && make install make[2]: Entering directory '/build/reproducible-path/lastz-1.04.22/src' install --strip-program=true -d /build/reproducible-path/lastz-1.04.22/debian/.debhelper/generated/_source/home/lastz-distrib/bin install: WARNING: ignoring --strip-program option as -s option was not specified install --strip-program=true lastz /build/reproducible-path/lastz-1.04.22/debian/.debhelper/generated/_source/home/lastz-distrib/bin install: WARNING: ignoring --strip-program option as -s option was not specified install --strip-program=true lastz_D /build/reproducible-path/lastz-1.04.22/debian/.debhelper/generated/_source/home/lastz-distrib/bin install: WARNING: ignoring --strip-program option as -s option was not specified make[2]: Leaving directory '/build/reproducible-path/lastz-1.04.22/src' make[1]: Leaving directory '/build/reproducible-path/lastz-1.04.22' dh_install dh_installdocs dh_installchangelogs dh_installman dh_python3 dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb dh_gencontrol dpkg-gencontrol: warning: Depends field of package lastz-examples: substitution variable ${python3:Depends} used, but is not defined dh_md5sums dh_builddeb dpkg-deb: building package 'lastz' in '../lastz_1.04.22-2_amd64.deb'. dpkg-deb: building package 'lastz-dbgsym' in '../lastz-dbgsym_1.04.22-2_amd64.deb'. dpkg-deb: building package 'lastz-examples' in '../lastz-examples_1.04.22-2_all.deb'. dpkg-genbuildinfo --build=binary -O../lastz_1.04.22-2_amd64.buildinfo dpkg-genchanges --build=binary -O../lastz_1.04.22-2_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/690335 and its subdirectories I: Current time: Fri Jun 6 04:18:55 -12 2025 I: pbuilder-time-stamp: 1749226735 Sat May 4 09:56:00 UTC 2024 I: 1st build successful. Starting 2nd build on remote node ionos11-amd64.debian.net. Sat May 4 09:56:00 UTC 2024 I: Preparing to do remote build '2' on ionos11-amd64.debian.net. Sat May 4 09:59:24 UTC 2024 I: Deleting $TMPDIR on ionos11-amd64.debian.net. Sat May 4 09:59:24 UTC 2024 I: lastz_1.04.22-2_amd64.changes: Format: 1.8 Date: Fri, 18 Nov 2022 12:25:49 +0100 Source: lastz Binary: lastz lastz-dbgsym lastz-examples Architecture: amd64 all Version: 1.04.22-2 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: lastz - pairwise aligning DNA sequences lastz-examples - pairwise aligning DNA sequences (examples and test scripts) Changes: lastz (1.04.22-2) unstable; urgency=medium . * Fix watch file Checksums-Sha1: 4fb7b0cfbdcde864d1af507cb324596bfd2bcf80 1150440 lastz-dbgsym_1.04.22-2_amd64.deb 9a658720a0b8f5cdbecf4e1699d21ae5f483ded9 4371804 lastz-examples_1.04.22-2_all.deb dd42bfccaa1520cc83942f7dff7ccea9b0726c1d 6025 lastz_1.04.22-2_amd64.buildinfo 0b843dcfef32e9824597a202b6cbb59694e643d6 524416 lastz_1.04.22-2_amd64.deb Checksums-Sha256: 3b1c2d19d41650420f9b68fdb96d01c849575f05c48b37ac5aa335e5942f5cb1 1150440 lastz-dbgsym_1.04.22-2_amd64.deb e7942e85bcd0e4ed9d0f78c3e5f8b19ef20e9081f6708049baa4086e32b5c06b 4371804 lastz-examples_1.04.22-2_all.deb dcaccfa0fb33c4580e18094fa917342174843b8e2ab216947987fa2737009bb9 6025 lastz_1.04.22-2_amd64.buildinfo e4094085d90e9dbd7bebb83be15f2d3490c0ba554b3bbf8eb2c17620cc4276b4 524416 lastz_1.04.22-2_amd64.deb Files: dead49f3eea2ad66f972fd92c45631b2 1150440 debug optional lastz-dbgsym_1.04.22-2_amd64.deb 48688a6bc13fc87c97c1eb5ae9821a55 4371804 science optional lastz-examples_1.04.22-2_all.deb bb6429addfe0193628d4abd817c2d0e9 6025 science optional lastz_1.04.22-2_amd64.buildinfo 1dc4f588dde425749163f75ae2d3af8f 524416 science optional lastz_1.04.22-2_amd64.deb Sat May 4 09:59:25 UTC 2024 I: diffoscope 265 will be used to compare the two builds: Running as unit: rb-diffoscope-amd64_16-18978.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.s8ED8CEf/lastz_1.04.22-2.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.s8ED8CEf/lastz_1.04.22-2.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.s8ED8CEf/lastz_1.04.22-2.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.s8ED8CEf/b1/lastz_1.04.22-2_amd64.changes /srv/reproducible-results/rbuild-debian/r-b-build.s8ED8CEf/b2/lastz_1.04.22-2_amd64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.426s) 0.426s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.079s) 0.079s 12 calls diffoscope.comparators.binary.FilesystemFile ## specialize (total time: 0.000s) 0.000s 1 call specialize Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 757ms CPU time consumed: 756ms Sat May 4 09:59:27 UTC 2024 I: diffoscope 265 found no differences in the changes files, and a .buildinfo file also exists. Sat May 4 09:59:27 UTC 2024 I: lastz from trixie built successfully and reproducibly on amd64. Sat May 4 09:59:28 UTC 2024 I: Submitting .buildinfo files to external archives: Sat May 4 09:59:28 UTC 2024 I: Submitting 8.0K b1/lastz_1.04.22-2_amd64.buildinfo.asc Sat May 4 09:59:29 UTC 2024 I: Submitting 8.0K b2/lastz_1.04.22-2_amd64.buildinfo.asc Sat May 4 09:59:29 UTC 2024 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Sat May 4 09:59:29 UTC 2024 I: Done submitting .buildinfo files. Sat May 4 09:59:29 UTC 2024 I: Removing signed lastz_1.04.22-2_amd64.buildinfo.asc files: removed './b1/lastz_1.04.22-2_amd64.buildinfo.asc' removed './b2/lastz_1.04.22-2_amd64.buildinfo.asc'