Thu May 2 05:52:03 UTC 2024 I: starting to build delly/trixie/amd64 on jenkins on '2024-05-02 05:51' Thu May 2 05:52:03 UTC 2024 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/amd64_34/9031/console.log Thu May 2 05:52:03 UTC 2024 I: Downloading source for trixie/delly=1.1.8-1 --2024-05-02 05:52:03-- http://deb.debian.org/debian/pool/main/d/delly/delly_1.1.8-1.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2110 (2.1K) [text/prs.lines.tag] Saving to: ‘delly_1.1.8-1.dsc’ 0K .. 100% 243M=0s 2024-05-02 05:52:03 (243 MB/s) - ‘delly_1.1.8-1.dsc’ saved [2110/2110] Thu May 2 05:52:03 UTC 2024 I: delly_1.1.8-1.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: delly Binary: delly Architecture: any Version: 1.1.8-1 Maintainer: Debian Med Packaging Team Uploaders: Steffen Moeller Homepage: https://github.com/dellytools/delly Standards-Version: 4.6.2 Vcs-Browser: https://salsa.debian.org/med-team/delly Vcs-Git: https://salsa.debian.org/med-team/delly.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13), libboost-date-time-dev, libboost-program-options-dev, libboost-system-dev, libboost-filesystem-dev, libboost-iostreams-dev, libhts-dev, libbz2-dev, zlib1g-dev, chrpath, debhelper Package-List: delly deb science optional arch=any Checksums-Sha1: cf08c2c461916e0c2ed3e0e156a133ed141ac4db 3743720 delly_1.1.8.orig.tar.xz 85b866350db703acd3f9193450034d51a1fb790d 5244 delly_1.1.8-1.debian.tar.xz Checksums-Sha256: 011e6a2a1e2bfcddd3e909ab38974b4220b69f308ef6049420e12112fe967bd3 3743720 delly_1.1.8.orig.tar.xz b3feab4ff9e3654487aafb8836a29703a40ac172d1bf2b343464a3738139e48f 5244 delly_1.1.8-1.debian.tar.xz Files: d803b6a94d7f64c179b7feda0f25679c 3743720 delly_1.1.8.orig.tar.xz d4a36fee1946cb9cca003d1109ccbf5c 5244 delly_1.1.8-1.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJDBAEBCgAtFiEELWW8HrlmWm6X+XMKs/WUUoUhnh8FAmUoCJkPHHJtYkBkZWJp YW4ub3JnAAoJELP1lFKFIZ4fL4kP/0AvXn4QPD0jbfn8GtfGqCPaQ2SxUcZe0JCM DNuzWfZ+kfadXNSpr+BMwZijLmNpgPsY+RpXrt5etweGmaoii/TBlfBgVQc6Uq2t uOj0lDriTLu3Jnm6iCzWNhFpj6DWvBn6ZYiIiUOANrBAZtNqQLsWjrxVvmLhFMFp sYk+Xj9T5OX/RcuQXfbXhjgT8HPGl21CwVzl84sX850HAizYKDqwKd669m2pLduf OHf+0w2JmyvkzmeZM0i75MOVSm9hUeO7nvzY6dmxsAosv/d8FDbzOi+ZI2YQqG5e 5By1kFWRLbSmSLUJ5oDbxFHfOxdfeePVOZRU/aqV+aN6X6MMajnkoK/W2n/NPzRi FeYAofznwdSMwtDpmTVQPLzs9u4bsO9xHKvmR1DIfIqtogBeA1XGhJJe+Rb8hS6x zu72dPgP0F//NDrO4SIlrBUg3Z5pMG1ANrZ+oHCHnMVLGV+iy6cewkbYcgcq9E1k uaXz+3GPqZIn9dbdURtXwSQBzm+ONDLZWpMbljZ5aILkOWMjqilVJtZ/s/29n5jW 2aswV7n0HXmmX2Z/w4tZ/HDffJFtr3DnwDGn4QEtrBpGPdn98bmB8qmVLJGWK/3/ MuTbw3rsOrtx7+zV6nHB7BEQ0G0YYl5wwEH2nYLCee8Wg3bFB5CLrPenNwSvGwjr IGXh7ei3 =h6bi -----END PGP SIGNATURE----- Thu May 2 05:52:03 UTC 2024 I: Checking whether the package is not for us Thu May 2 05:52:03 UTC 2024 I: Starting 1st build on remote node infom02-amd64.debian.net. Thu May 2 05:52:03 UTC 2024 I: Preparing to do remote build '1' on infom02-amd64.debian.net. Thu May 2 05:55:56 UTC 2024 I: Deleting $TMPDIR on infom02-amd64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Wed Jun 4 00:15:05 -12 2025 I: pbuilder-time-stamp: 1749039305 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [delly_1.1.8-1.dsc] I: copying [./delly_1.1.8.orig.tar.xz] I: copying [./delly_1.1.8-1.debian.tar.xz] I: Extracting source gpgv: Signature made Thu Oct 12 14:54:17 2023 gpgv: using RSA key 2D65BC1EB9665A6E97F9730AB3F5945285219E1F gpgv: issuer "rmb@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./delly_1.1.8-1.dsc: no acceptable signature found dpkg-source: info: extracting delly in delly-1.1.8 dpkg-source: info: unpacking delly_1.1.8.orig.tar.xz dpkg-source: info: unpacking delly_1.1.8-1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying reproducible.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/4055506/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='amd64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' DISTRIBUTION='trixie' HOME='/root' HOST_ARCH='amd64' IFS=' ' INVOCATION_ID='ca4073a1d55d4c048f02a84114e15e55' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='4055506' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.b2zavsuP/pbuilderrc_JoCO --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.b2zavsuP/b1 --logfile b1/build.log delly_1.1.8-1.dsc' SUDO_GID='109' SUDO_UID='104' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' I: uname -a Linux infom02-amd64 6.6.13+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.6.13-1~bpo12+1 (2024-02-15) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 May 24 13:34 /bin -> usr/bin I: user script /srv/workspace/pbuilder/4055506/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), libboost-date-time-dev, libboost-program-options-dev, libboost-system-dev, libboost-filesystem-dev, libboost-iostreams-dev, libhts-dev, libbz2-dev, zlib1g-dev, chrpath, debhelper dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19875 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on libboost-date-time-dev; however: Package libboost-date-time-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-program-options-dev; however: Package libboost-program-options-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-system-dev; however: Package libboost-system-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-filesystem-dev; however: Package libboost-filesystem-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-iostreams-dev; however: Package libboost-iostreams-dev is not installed. pbuilder-satisfydepends-dummy depends on libhts-dev; however: Package libhts-dev is not installed. pbuilder-satisfydepends-dummy depends on libbz2-dev; however: Package libbz2-dev is not installed. pbuilder-satisfydepends-dummy depends on zlib1g-dev; however: Package zlib1g-dev is not installed. pbuilder-satisfydepends-dummy depends on chrpath; however: Package chrpath is not installed. pbuilder-satisfydepends-dummy depends on debhelper; however: Package debhelper is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} chrpath{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} icu-devtools{a} intltool-debian{a} libarchive-zip-perl{a} libboost-atomic1.83-dev{a} libboost-atomic1.83.0{a} libboost-date-time-dev{a} libboost-date-time1.83-dev{a} libboost-date-time1.83.0{a} libboost-filesystem-dev{a} libboost-filesystem1.83-dev{a} libboost-filesystem1.83.0{a} libboost-iostreams-dev{a} libboost-iostreams1.83-dev{a} libboost-program-options-dev{a} libboost-program-options1.83-dev{a} libboost-program-options1.83.0{a} libboost-regex1.83-dev{a} libboost-regex1.83.0{a} libboost-serialization1.83-dev{a} libboost-serialization1.83.0{a} libboost-system-dev{a} libboost-system1.83-dev{a} libboost-system1.83.0{a} libboost1.83-dev{a} libbz2-dev{a} libdebhelper-perl{a} libelf1t64{a} libfile-stripnondeterminism-perl{a} libicu-dev{a} libicu72{a} libmagic-mgc{a} libmagic1t64{a} libpipeline1{a} libsub-override-perl{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: bzip2-doc curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 56 newly installed, 0 to remove and 0 not upgraded. Need to get 45.5 MB of archives. After unpacking 325 MB will be used. The following packages have unmet dependencies: pbuilder-satisfydepends-dummy : Depends: libhts-dev but it is not installable The following actions will resolve these dependencies: Remove the following packages: 1) libssl3 [3.1.5-1 (now)] Install the following packages: 2) libbrotli1 [1.1.0-2+b3 (testing)] 3) libcurl3t64-gnutls [8.7.1-3 (testing)] 4) libcurl4-gnutls-dev [8.7.1-3 (testing)] 5) libdeflate-dev [1.20-1 (testing)] 6) libdeflate0 [1.20-1 (testing)] 7) libhts-dev [1.19+ds-1 (testing)] 8) libhts3 [1.19+ds-1 (testing)] 9) libhtscodecs2 [1.6.0-1+b1 (testing)] 10) libldap-2.5-0 [2.5.13+dfsg-5+b3 (testing)] 11) liblzma-dev [5.6.1+really5.4.5-1 (testing)] 12) libnghttp2-14 [1.59.0-1 (testing)] 13) libpsl5t64 [0.21.2-1.1 (testing)] 14) librtmp1 [2.4+20151223.gitfa8646d.1-2+b4 (testing)] 15) libsasl2-2 [2.1.28+dfsg1-4+b1 (testing)] 16) libsasl2-modules-db [2.1.28+dfsg1-4+b1 (testing)] 17) libssh2-1t64 [1.11.0-4.1+b2 (testing)] 18) libssl3t64 [3.2.1-3 (testing)] The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} chrpath{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} icu-devtools{a} intltool-debian{a} libarchive-zip-perl{a} libboost-atomic1.83-dev{a} libboost-atomic1.83.0{a} libboost-date-time-dev{a} libboost-date-time1.83-dev{a} libboost-date-time1.83.0{a} libboost-filesystem-dev{a} libboost-filesystem1.83-dev{a} libboost-filesystem1.83.0{a} libboost-iostreams-dev{a} libboost-iostreams1.83-dev{a} libboost-program-options-dev{a} libboost-program-options1.83-dev{a} libboost-program-options1.83.0{a} libboost-regex1.83-dev{a} libboost-regex1.83.0{a} libboost-serialization1.83-dev{a} libboost-serialization1.83.0{a} libboost-system-dev{a} libboost-system1.83-dev{a} libboost-system1.83.0{a} libboost1.83-dev{a} libbrotli1{a} libbz2-dev{a} libcurl3t64-gnutls{a} libcurl4-gnutls-dev{a} libdebhelper-perl{a} libdeflate-dev{a} libdeflate0{a} libelf1t64{a} libfile-stripnondeterminism-perl{a} libhts-dev{a} libhts3{a} libhtscodecs2{a} libicu-dev{a} libicu72{a} libldap-2.5-0{a} liblzma-dev{a} libmagic-mgc{a} libmagic1t64{a} libnghttp2-14{a} libpipeline1{a} libpsl5t64{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libssh2-1t64{a} libssl3t64{a} libsub-override-perl{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a} zlib1g-dev{a} The following packages will be REMOVED: libssl3{a} The following packages are RECOMMENDED but will NOT be installed: bzip2-doc ca-certificates curl libarchive-cpio-perl libldap-common libltdl-dev libmail-sendmail-perl libsasl2-modules lynx publicsuffix wget 0 packages upgraded, 73 newly installed, 1 to remove and 0 not upgraded. Need to get 52.3 MB of archives. After unpacking 341 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main amd64 libssl3t64 amd64 3.2.1-3 [2244 kB] Get: 2 http://deb.debian.org/debian trixie/main amd64 sensible-utils all 0.0.22 [22.4 kB] Get: 3 http://deb.debian.org/debian trixie/main amd64 libmagic-mgc amd64 1:5.45-3 [314 kB] Get: 4 http://deb.debian.org/debian trixie/main amd64 libmagic1t64 amd64 1:5.45-3 [105 kB] Get: 5 http://deb.debian.org/debian trixie/main amd64 file amd64 1:5.45-3 [42.9 kB] Get: 6 http://deb.debian.org/debian trixie/main amd64 gettext-base amd64 0.21-14+b1 [161 kB] Get: 7 http://deb.debian.org/debian trixie/main amd64 libuchardet0 amd64 0.0.8-1+b1 [68.8 kB] Get: 8 http://deb.debian.org/debian trixie/main amd64 groff-base amd64 1.23.0-3+b1 [1180 kB] Get: 9 http://deb.debian.org/debian trixie/main amd64 bsdextrautils amd64 2.40-8 [92.8 kB] Get: 10 http://deb.debian.org/debian trixie/main amd64 libpipeline1 amd64 1.5.7-2 [38.0 kB] Get: 11 http://deb.debian.org/debian trixie/main amd64 man-db amd64 2.12.0-3 [1401 kB] Get: 12 http://deb.debian.org/debian trixie/main amd64 m4 amd64 1.4.19-4 [287 kB] Get: 13 http://deb.debian.org/debian trixie/main amd64 autoconf all 2.71-3 [332 kB] Get: 14 http://deb.debian.org/debian trixie/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get: 15 http://deb.debian.org/debian trixie/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get: 16 http://deb.debian.org/debian trixie/main amd64 autopoint all 0.21-14 [496 kB] Get: 17 http://deb.debian.org/debian trixie/main amd64 chrpath amd64 0.16-2+b1 [17.1 kB] Get: 18 http://deb.debian.org/debian trixie/main amd64 libdebhelper-perl all 13.15.3 [88.0 kB] Get: 19 http://deb.debian.org/debian trixie/main amd64 libtool all 2.4.7-7 [517 kB] Get: 20 http://deb.debian.org/debian trixie/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 21 http://deb.debian.org/debian trixie/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 22 http://deb.debian.org/debian trixie/main amd64 libsub-override-perl all 0.10-1 [10.6 kB] Get: 23 http://deb.debian.org/debian trixie/main amd64 libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get: 24 http://deb.debian.org/debian trixie/main amd64 dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get: 25 http://deb.debian.org/debian trixie/main amd64 libelf1t64 amd64 0.191-1+b1 [189 kB] Get: 26 http://deb.debian.org/debian trixie/main amd64 dwz amd64 0.15-1+b1 [110 kB] Get: 27 http://deb.debian.org/debian trixie/main amd64 libicu72 amd64 72.1-4+b1 [9395 kB] Get: 28 http://deb.debian.org/debian trixie/main amd64 libxml2 amd64 2.9.14+dfsg-1.3+b3 [692 kB] Get: 29 http://deb.debian.org/debian trixie/main amd64 gettext amd64 0.21-14+b1 [1301 kB] Get: 30 http://deb.debian.org/debian trixie/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 31 http://deb.debian.org/debian trixie/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 32 http://deb.debian.org/debian trixie/main amd64 debhelper all 13.15.3 [901 kB] Get: 33 http://deb.debian.org/debian trixie/main amd64 icu-devtools amd64 72.1-4+b1 [208 kB] Get: 34 http://deb.debian.org/debian trixie/main amd64 libboost1.83-dev amd64 1.83.0-2+b2 [10.6 MB] Get: 35 http://deb.debian.org/debian trixie/main amd64 libboost-atomic1.83.0 amd64 1.83.0-2+b2 [234 kB] Get: 36 http://deb.debian.org/debian trixie/main amd64 libboost-atomic1.83-dev amd64 1.83.0-2+b2 [235 kB] Get: 37 http://deb.debian.org/debian trixie/main amd64 libboost-date-time1.83.0 amd64 1.83.0-2+b2 [230 kB] Get: 38 http://deb.debian.org/debian trixie/main amd64 libboost-serialization1.83.0 amd64 1.83.0-2+b2 [332 kB] Get: 39 http://deb.debian.org/debian trixie/main amd64 libboost-serialization1.83-dev amd64 1.83.0-2+b2 [373 kB] Get: 40 http://deb.debian.org/debian trixie/main amd64 libboost-date-time1.83-dev amd64 1.83.0-2+b2 [239 kB] Get: 41 http://deb.debian.org/debian trixie/main amd64 libboost-date-time-dev amd64 1.83.0.2+b2 [3596 B] Get: 42 http://deb.debian.org/debian trixie/main amd64 libboost-filesystem1.83.0 amd64 1.83.0-2+b2 [280 kB] Get: 43 http://deb.debian.org/debian trixie/main amd64 libboost-system1.83.0 amd64 1.83.0-2+b2 [230 kB] Get: 44 http://deb.debian.org/debian trixie/main amd64 libboost-system1.83-dev amd64 1.83.0-2+b2 [231 kB] Get: 45 http://deb.debian.org/debian trixie/main amd64 libboost-filesystem1.83-dev amd64 1.83.0-2+b2 [295 kB] Get: 46 http://deb.debian.org/debian trixie/main amd64 libboost-filesystem-dev amd64 1.83.0.2+b2 [3628 B] Get: 47 http://deb.debian.org/debian trixie/main amd64 libboost-regex1.83.0 amd64 1.83.0-2+b2 [325 kB] Get: 48 http://deb.debian.org/debian trixie/main amd64 libicu-dev amd64 72.1-4+b1 [10.4 MB] Get: 49 http://deb.debian.org/debian trixie/main amd64 libboost-regex1.83-dev amd64 1.83.0-2+b2 [342 kB] Get: 50 http://deb.debian.org/debian trixie/main amd64 libboost-iostreams1.83-dev amd64 1.83.0-2+b2 [261 kB] Get: 51 http://deb.debian.org/debian trixie/main amd64 libboost-iostreams-dev amd64 1.83.0.2+b2 [3580 B] Get: 52 http://deb.debian.org/debian trixie/main amd64 libboost-program-options1.83.0 amd64 1.83.0-2+b2 [345 kB] Get: 53 http://deb.debian.org/debian trixie/main amd64 libboost-program-options1.83-dev amd64 1.83.0-2+b2 [373 kB] Get: 54 http://deb.debian.org/debian trixie/main amd64 libboost-program-options-dev amd64 1.83.0.2+b2 [3612 B] Get: 55 http://deb.debian.org/debian trixie/main amd64 libboost-system-dev amd64 1.83.0.2+b2 [3736 B] Get: 56 http://deb.debian.org/debian trixie/main amd64 libbrotli1 amd64 1.1.0-2+b3 [305 kB] Get: 57 http://deb.debian.org/debian trixie/main amd64 libbz2-dev amd64 1.0.8-5.1 [31.3 kB] Get: 58 http://deb.debian.org/debian trixie/main amd64 libsasl2-modules-db amd64 2.1.28+dfsg1-4+b1 [19.7 kB] Get: 59 http://deb.debian.org/debian trixie/main amd64 libsasl2-2 amd64 2.1.28+dfsg1-4+b1 [57.0 kB] Get: 60 http://deb.debian.org/debian trixie/main amd64 libldap-2.5-0 amd64 2.5.13+dfsg-5+b3 [184 kB] Get: 61 http://deb.debian.org/debian trixie/main amd64 libnghttp2-14 amd64 1.59.0-1 [74.3 kB] Get: 62 http://deb.debian.org/debian trixie/main amd64 libpsl5t64 amd64 0.21.2-1.1 [56.8 kB] Get: 63 http://deb.debian.org/debian trixie/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b4 [58.5 kB] Get: 64 http://deb.debian.org/debian trixie/main amd64 libssh2-1t64 amd64 1.11.0-4.1+b2 [215 kB] Get: 65 http://deb.debian.org/debian trixie/main amd64 libcurl3t64-gnutls amd64 8.7.1-3 [432 kB] Get: 66 http://deb.debian.org/debian trixie/main amd64 libcurl4-gnutls-dev amd64 8.7.1-3 [537 kB] Get: 67 http://deb.debian.org/debian trixie/main amd64 libdeflate0 amd64 1.20-1 [46.0 kB] Get: 68 http://deb.debian.org/debian trixie/main amd64 libdeflate-dev amd64 1.20-1 [54.5 kB] Get: 69 http://deb.debian.org/debian trixie/main amd64 libhtscodecs2 amd64 1.6.0-1+b1 [93.0 kB] Get: 70 http://deb.debian.org/debian trixie/main amd64 libhts3 amd64 1.19+ds-1 [447 kB] Get: 71 http://deb.debian.org/debian trixie/main amd64 liblzma-dev amd64 5.6.1+really5.4.5-1 [293 kB] Get: 72 http://deb.debian.org/debian trixie/main amd64 zlib1g-dev amd64 1:1.3.dfsg-3.1 [918 kB] Get: 73 http://deb.debian.org/debian trixie/main amd64 libhts-dev amd64 1.19+ds-1 [1667 kB] Fetched 52.3 MB in 2s (29.5 MB/s) debconf: delaying package configuration, since apt-utils is not installed dpkg: libssl3:amd64: dependency problems, but removing anyway as you requested: libkrb5-3:amd64 depends on libssl3 (>= 3.0.0). coreutils depends on libssl3 (>= 3.0.0). (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19875 files and directories currently installed.) Removing libssl3:amd64 (3.1.5-1) ... Selecting previously unselected package libssl3t64:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19862 files and directories currently installed.) Preparing to unpack .../libssl3t64_3.2.1-3_amd64.deb ... Unpacking libssl3t64:amd64 (3.2.1-3) ... Setting up libssl3t64:amd64 (3.2.1-3) ... Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19877 files and directories currently installed.) Preparing to unpack .../00-sensible-utils_0.0.22_all.deb ... Unpacking sensible-utils (0.0.22) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../01-libmagic-mgc_1%3a5.45-3_amd64.deb ... Unpacking libmagic-mgc (1:5.45-3) ... Selecting previously unselected package libmagic1t64:amd64. Preparing to unpack .../02-libmagic1t64_1%3a5.45-3_amd64.deb ... Unpacking libmagic1t64:amd64 (1:5.45-3) ... Selecting previously unselected package file. Preparing to unpack .../03-file_1%3a5.45-3_amd64.deb ... Unpacking file (1:5.45-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../04-gettext-base_0.21-14+b1_amd64.deb ... Unpacking gettext-base (0.21-14+b1) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../05-libuchardet0_0.0.8-1+b1_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.8-1+b1) ... Selecting previously unselected package groff-base. Preparing to unpack .../06-groff-base_1.23.0-3+b1_amd64.deb ... Unpacking groff-base (1.23.0-3+b1) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../07-bsdextrautils_2.40-8_amd64.deb ... Unpacking bsdextrautils (2.40-8) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../08-libpipeline1_1.5.7-2_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.7-2) ... Selecting previously unselected package man-db. Preparing to unpack .../09-man-db_2.12.0-3_amd64.deb ... Unpacking man-db (2.12.0-3) ... Selecting previously unselected package m4. Preparing to unpack .../10-m4_1.4.19-4_amd64.deb ... Unpacking m4 (1.4.19-4) ... Selecting previously unselected package autoconf. Preparing to unpack .../11-autoconf_2.71-3_all.deb ... Unpacking autoconf (2.71-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../12-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../13-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../14-autopoint_0.21-14_all.deb ... Unpacking autopoint (0.21-14) ... Selecting previously unselected package chrpath. Preparing to unpack .../15-chrpath_0.16-2+b1_amd64.deb ... Unpacking chrpath (0.16-2+b1) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../16-libdebhelper-perl_13.15.3_all.deb ... Unpacking libdebhelper-perl (13.15.3) ... Selecting previously unselected package libtool. Preparing to unpack .../17-libtool_2.4.7-7_all.deb ... Unpacking libtool (2.4.7-7) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../18-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../19-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libsub-override-perl. Preparing to unpack .../20-libsub-override-perl_0.10-1_all.deb ... Unpacking libsub-override-perl (0.10-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../21-libfile-stripnondeterminism-perl_1.13.1-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.13.1-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../22-dh-strip-nondeterminism_1.13.1-1_all.deb ... Unpacking dh-strip-nondeterminism (1.13.1-1) ... Selecting previously unselected package libelf1t64:amd64. Preparing to unpack .../23-libelf1t64_0.191-1+b1_amd64.deb ... Unpacking libelf1t64:amd64 (0.191-1+b1) ... Selecting previously unselected package dwz. Preparing to unpack .../24-dwz_0.15-1+b1_amd64.deb ... Unpacking dwz (0.15-1+b1) ... Selecting previously unselected package libicu72:amd64. Preparing to unpack .../25-libicu72_72.1-4+b1_amd64.deb ... Unpacking libicu72:amd64 (72.1-4+b1) ... Selecting previously unselected package libxml2:amd64. Preparing to unpack .../26-libxml2_2.9.14+dfsg-1.3+b3_amd64.deb ... Unpacking libxml2:amd64 (2.9.14+dfsg-1.3+b3) ... Selecting previously unselected package gettext. Preparing to unpack .../27-gettext_0.21-14+b1_amd64.deb ... Unpacking gettext (0.21-14+b1) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../28-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../29-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../30-debhelper_13.15.3_all.deb ... Unpacking debhelper (13.15.3) ... Selecting previously unselected package icu-devtools. Preparing to unpack .../31-icu-devtools_72.1-4+b1_amd64.deb ... Unpacking icu-devtools (72.1-4+b1) ... Selecting previously unselected package libboost1.83-dev:amd64. Preparing to unpack .../32-libboost1.83-dev_1.83.0-2+b2_amd64.deb ... Unpacking libboost1.83-dev:amd64 (1.83.0-2+b2) ... Selecting previously unselected package libboost-atomic1.83.0:amd64. Preparing to unpack .../33-libboost-atomic1.83.0_1.83.0-2+b2_amd64.deb ... Unpacking libboost-atomic1.83.0:amd64 (1.83.0-2+b2) ... Selecting previously unselected package libboost-atomic1.83-dev:amd64. Preparing to unpack .../34-libboost-atomic1.83-dev_1.83.0-2+b2_amd64.deb ... Unpacking libboost-atomic1.83-dev:amd64 (1.83.0-2+b2) ... Selecting previously unselected package libboost-date-time1.83.0:amd64. Preparing to unpack .../35-libboost-date-time1.83.0_1.83.0-2+b2_amd64.deb ... Unpacking libboost-date-time1.83.0:amd64 (1.83.0-2+b2) ... Selecting previously unselected package libboost-serialization1.83.0:amd64. Preparing to unpack .../36-libboost-serialization1.83.0_1.83.0-2+b2_amd64.deb ... Unpacking libboost-serialization1.83.0:amd64 (1.83.0-2+b2) ... Selecting previously unselected package libboost-serialization1.83-dev:amd64. Preparing to unpack .../37-libboost-serialization1.83-dev_1.83.0-2+b2_amd64.deb ... Unpacking libboost-serialization1.83-dev:amd64 (1.83.0-2+b2) ... Selecting previously unselected package libboost-date-time1.83-dev:amd64. Preparing to unpack .../38-libboost-date-time1.83-dev_1.83.0-2+b2_amd64.deb ... Unpacking libboost-date-time1.83-dev:amd64 (1.83.0-2+b2) ... Selecting previously unselected package libboost-date-time-dev:amd64. Preparing to unpack .../39-libboost-date-time-dev_1.83.0.2+b2_amd64.deb ... Unpacking libboost-date-time-dev:amd64 (1.83.0.2+b2) ... Selecting previously unselected package libboost-filesystem1.83.0:amd64. Preparing to unpack .../40-libboost-filesystem1.83.0_1.83.0-2+b2_amd64.deb ... Unpacking libboost-filesystem1.83.0:amd64 (1.83.0-2+b2) ... Selecting previously unselected package libboost-system1.83.0:amd64. Preparing to unpack .../41-libboost-system1.83.0_1.83.0-2+b2_amd64.deb ... Unpacking libboost-system1.83.0:amd64 (1.83.0-2+b2) ... Selecting previously unselected package libboost-system1.83-dev:amd64. Preparing to unpack .../42-libboost-system1.83-dev_1.83.0-2+b2_amd64.deb ... Unpacking libboost-system1.83-dev:amd64 (1.83.0-2+b2) ... Selecting previously unselected package libboost-filesystem1.83-dev:amd64. Preparing to unpack .../43-libboost-filesystem1.83-dev_1.83.0-2+b2_amd64.deb ... Unpacking libboost-filesystem1.83-dev:amd64 (1.83.0-2+b2) ... Selecting previously unselected package libboost-filesystem-dev:amd64. Preparing to unpack .../44-libboost-filesystem-dev_1.83.0.2+b2_amd64.deb ... Unpacking libboost-filesystem-dev:amd64 (1.83.0.2+b2) ... Selecting previously unselected package libboost-regex1.83.0:amd64. Preparing to unpack .../45-libboost-regex1.83.0_1.83.0-2+b2_amd64.deb ... Unpacking libboost-regex1.83.0:amd64 (1.83.0-2+b2) ... Selecting previously unselected package libicu-dev:amd64. Preparing to unpack .../46-libicu-dev_72.1-4+b1_amd64.deb ... Unpacking libicu-dev:amd64 (72.1-4+b1) ... Selecting previously unselected package libboost-regex1.83-dev:amd64. Preparing to unpack .../47-libboost-regex1.83-dev_1.83.0-2+b2_amd64.deb ... Unpacking libboost-regex1.83-dev:amd64 (1.83.0-2+b2) ... Selecting previously unselected package libboost-iostreams1.83-dev:amd64. Preparing to unpack .../48-libboost-iostreams1.83-dev_1.83.0-2+b2_amd64.deb ... Unpacking libboost-iostreams1.83-dev:amd64 (1.83.0-2+b2) ... Selecting previously unselected package libboost-iostreams-dev:amd64. Preparing to unpack .../49-libboost-iostreams-dev_1.83.0.2+b2_amd64.deb ... Unpacking libboost-iostreams-dev:amd64 (1.83.0.2+b2) ... Selecting previously unselected package libboost-program-options1.83.0:amd64. Preparing to unpack .../50-libboost-program-options1.83.0_1.83.0-2+b2_amd64.deb ... Unpacking libboost-program-options1.83.0:amd64 (1.83.0-2+b2) ... Selecting previously unselected package libboost-program-options1.83-dev:amd64. Preparing to unpack .../51-libboost-program-options1.83-dev_1.83.0-2+b2_amd64.deb ... Unpacking libboost-program-options1.83-dev:amd64 (1.83.0-2+b2) ... Selecting previously unselected package libboost-program-options-dev:amd64. Preparing to unpack .../52-libboost-program-options-dev_1.83.0.2+b2_amd64.deb ... Unpacking libboost-program-options-dev:amd64 (1.83.0.2+b2) ... Selecting previously unselected package libboost-system-dev:amd64. Preparing to unpack .../53-libboost-system-dev_1.83.0.2+b2_amd64.deb ... Unpacking libboost-system-dev:amd64 (1.83.0.2+b2) ... Selecting previously unselected package libbrotli1:amd64. Preparing to unpack .../54-libbrotli1_1.1.0-2+b3_amd64.deb ... Unpacking libbrotli1:amd64 (1.1.0-2+b3) ... Selecting previously unselected package libbz2-dev:amd64. Preparing to unpack .../55-libbz2-dev_1.0.8-5.1_amd64.deb ... Unpacking libbz2-dev:amd64 (1.0.8-5.1) ... Selecting previously unselected package libsasl2-modules-db:amd64. Preparing to unpack .../56-libsasl2-modules-db_2.1.28+dfsg1-4+b1_amd64.deb ... Unpacking libsasl2-modules-db:amd64 (2.1.28+dfsg1-4+b1) ... Selecting previously unselected package libsasl2-2:amd64. Preparing to unpack .../57-libsasl2-2_2.1.28+dfsg1-4+b1_amd64.deb ... Unpacking libsasl2-2:amd64 (2.1.28+dfsg1-4+b1) ... Selecting previously unselected package libldap-2.5-0:amd64. Preparing to unpack .../58-libldap-2.5-0_2.5.13+dfsg-5+b3_amd64.deb ... Unpacking libldap-2.5-0:amd64 (2.5.13+dfsg-5+b3) ... Selecting previously unselected package libnghttp2-14:amd64. Preparing to unpack .../59-libnghttp2-14_1.59.0-1_amd64.deb ... Unpacking libnghttp2-14:amd64 (1.59.0-1) ... Selecting previously unselected package libpsl5t64:amd64. Preparing to unpack .../60-libpsl5t64_0.21.2-1.1_amd64.deb ... Unpacking libpsl5t64:amd64 (0.21.2-1.1) ... Selecting previously unselected package librtmp1:amd64. Preparing to unpack .../61-librtmp1_2.4+20151223.gitfa8646d.1-2+b4_amd64.deb ... Unpacking librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b4) ... Selecting previously unselected package libssh2-1t64:amd64. Preparing to unpack .../62-libssh2-1t64_1.11.0-4.1+b2_amd64.deb ... Unpacking libssh2-1t64:amd64 (1.11.0-4.1+b2) ... Selecting previously unselected package libcurl3t64-gnutls:amd64. Preparing to unpack .../63-libcurl3t64-gnutls_8.7.1-3_amd64.deb ... Unpacking libcurl3t64-gnutls:amd64 (8.7.1-3) ... Selecting previously unselected package libcurl4-gnutls-dev:amd64. Preparing to unpack .../64-libcurl4-gnutls-dev_8.7.1-3_amd64.deb ... Unpacking libcurl4-gnutls-dev:amd64 (8.7.1-3) ... Selecting previously unselected package libdeflate0:amd64. Preparing to unpack .../65-libdeflate0_1.20-1_amd64.deb ... Unpacking libdeflate0:amd64 (1.20-1) ... Selecting previously unselected package libdeflate-dev:amd64. Preparing to unpack .../66-libdeflate-dev_1.20-1_amd64.deb ... Unpacking libdeflate-dev:amd64 (1.20-1) ... Selecting previously unselected package libhtscodecs2:amd64. Preparing to unpack .../67-libhtscodecs2_1.6.0-1+b1_amd64.deb ... Unpacking libhtscodecs2:amd64 (1.6.0-1+b1) ... Selecting previously unselected package libhts3:amd64. Preparing to unpack .../68-libhts3_1.19+ds-1_amd64.deb ... Unpacking libhts3:amd64 (1.19+ds-1) ... Selecting previously unselected package liblzma-dev:amd64. Preparing to unpack .../69-liblzma-dev_5.6.1+really5.4.5-1_amd64.deb ... Unpacking liblzma-dev:amd64 (5.6.1+really5.4.5-1) ... Selecting previously unselected package zlib1g-dev:amd64. Preparing to unpack .../70-zlib1g-dev_1%3a1.3.dfsg-3.1_amd64.deb ... Unpacking zlib1g-dev:amd64 (1:1.3.dfsg-3.1) ... Selecting previously unselected package libhts-dev:amd64. Preparing to unpack .../71-libhts-dev_1.19+ds-1_amd64.deb ... Unpacking libhts-dev:amd64 (1.19+ds-1) ... Setting up libhtscodecs2:amd64 (1.6.0-1+b1) ... Setting up libpipeline1:amd64 (1.5.7-2) ... Setting up libboost-program-options1.83.0:amd64 (1.83.0-2+b2) ... Setting up libboost1.83-dev:amd64 (1.83.0-2+b2) ... Setting up libicu72:amd64 (72.1-4+b1) ... Setting up bsdextrautils (2.40-8) ... Setting up libboost-date-time1.83.0:amd64 (1.83.0-2+b2) ... Setting up libmagic-mgc (1:5.45-3) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libboost-regex1.83.0:amd64 (1.83.0-2+b2) ... Setting up libdebhelper-perl (13.15.3) ... Setting up libbrotli1:amd64 (1.1.0-2+b3) ... Setting up libboost-system1.83.0:amd64 (1.83.0-2+b2) ... Setting up libmagic1t64:amd64 (1:5.45-3) ... Setting up libboost-program-options1.83-dev:amd64 (1.83.0-2+b2) ... Setting up libpsl5t64:amd64 (0.21.2-1.1) ... Setting up libnghttp2-14:amd64 (1.59.0-1) ... Setting up libdeflate0:amd64 (1.20-1) ... Setting up gettext-base (0.21-14+b1) ... Setting up m4 (1.4.19-4) ... Setting up file (1:5.45-3) ... Setting up libboost-filesystem1.83.0:amd64 (1.83.0-2+b2) ... Setting up libelf1t64:amd64 (0.191-1+b1) ... Setting up libsasl2-modules-db:amd64 (2.1.28+dfsg1-4+b1) ... Setting up libboost-atomic1.83.0:amd64 (1.83.0-2+b2) ... Setting up libboost-serialization1.83.0:amd64 (1.83.0-2+b2) ... Setting up autotools-dev (20220109.1) ... Setting up libboost-program-options-dev:amd64 (1.83.0.2+b2) ... Setting up librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2+b4) ... Setting up autopoint (0.21-14) ... Setting up icu-devtools (72.1-4+b1) ... Setting up libsasl2-2:amd64 (2.1.28+dfsg1-4+b1) ... Setting up libboost-atomic1.83-dev:amd64 (1.83.0-2+b2) ... Setting up autoconf (2.71-3) ... Setting up liblzma-dev:amd64 (5.6.1+really5.4.5-1) ... Setting up zlib1g-dev:amd64 (1:1.3.dfsg-3.1) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.22) ... Setting up libuchardet0:amd64 (0.0.8-1+b1) ... Setting up libsub-override-perl (0.10-1) ... Setting up libboost-system1.83-dev:amd64 (1.83.0-2+b2) ... Setting up libssh2-1t64:amd64 (1.11.0-4.1+b2) ... Setting up libdeflate-dev:amd64 (1.20-1) ... Setting up libicu-dev:amd64 (72.1-4+b1) ... Setting up libxml2:amd64 (2.9.14+dfsg-1.3+b3) ... Setting up chrpath (0.16-2+b1) ... Setting up libbz2-dev:amd64 (1.0.8-5.1) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.13.1-1) ... Setting up gettext (0.21-14+b1) ... Setting up libtool (2.4.7-7) ... Setting up libboost-system-dev:amd64 (1.83.0.2+b2) ... Setting up libboost-serialization1.83-dev:amd64 (1.83.0-2+b2) ... Setting up libboost-filesystem1.83-dev:amd64 (1.83.0-2+b2) ... Setting up libldap-2.5-0:amd64 (2.5.13+dfsg-5+b3) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up libboost-date-time1.83-dev:amd64 (1.83.0-2+b2) ... Setting up libboost-regex1.83-dev:amd64 (1.83.0-2+b2) ... Setting up libboost-date-time-dev:amd64 (1.83.0.2+b2) ... Setting up dh-strip-nondeterminism (1.13.1-1) ... Setting up groff-base (1.23.0-3+b1) ... Setting up libboost-filesystem-dev:amd64 (1.83.0.2+b2) ... Setting up libboost-iostreams1.83-dev:amd64 (1.83.0-2+b2) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libcurl3t64-gnutls:amd64 (8.7.1-3) ... Setting up libboost-iostreams-dev:amd64 (1.83.0.2+b2) ... Setting up libcurl4-gnutls-dev:amd64 (8.7.1-3) ... Setting up man-db (2.12.0-3) ... Not building database; man-db/auto-update is not 'true'. Setting up libhts3:amd64 (1.19+ds-1) ... Setting up libhts-dev:amd64 (1.19+ds-1) ... Setting up debhelper (13.15.3) ... Processing triggers for libc-bin (2.37-18) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/delly-1.1.8/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../delly_1.1.8-1_source.changes dpkg-buildpackage: info: source package delly dpkg-buildpackage: info: source version 1.1.8-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Mohammed Bilal dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean debian/rules override_dh_auto_clean make[1]: Entering directory '/build/reproducible-path/delly-1.1.8' dh_auto_clean make -j12 distclean make[2]: Entering directory '/build/reproducible-path/delly-1.1.8' if [ -r src/htslib/Makefile ]; then cd src/htslib && make clean; fi rm -f src/delly src/delly.o rm -f src/delly make[2]: Leaving directory '/build/reproducible-path/delly-1.1.8' rm -rf src/dpe src/delly bin/delly make[1]: Leaving directory '/build/reproducible-path/delly-1.1.8' dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf dh_auto_configure debian/rules override_dh_auto_build make[1]: Entering directory '/build/reproducible-path/delly-1.1.8' dh_auto_build -- BUILT_PROGRAMS="src/delly" PARALLEL=1 make -j12 "INSTALL=install --strip-program=true" BUILT_PROGRAMS=src/delly PARALLEL=1 make[2]: Entering directory '/build/reproducible-path/delly-1.1.8' g++ -g -O2 -ffile-prefix-map=/build/reproducible-path/delly-1.1.8=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -isystem /usr/include/htslib/ -pedantic -W -Wall -Wno-unknown-pragmas -D__STDC_LIMIT_MACROS -fno-strict-aliasing -fpermissive -fopenmp -DOPENMP -O3 -fno-tree-vectorize -DNDEBUG src/delly.cpp src/edlib.cpp -o src/delly -Wl,-z,relro -Wl,-z,now -L/usr/include/htslib/ -lboost_iostreams -lboost_filesystem -lboost_system -lboost_program_options -lboost_date_time -lhts -lz -llzma -lbz2 -Wl,-rpath,/usr/include/htslib/ In file included from /usr/include/boost/math/special_functions/detail/round_fwd.hpp:11, from /usr/include/boost/math/special_functions/math_fwd.hpp:29, from /usr/include/boost/math/special_functions/pow.hpp:16, from src/delly.h:19, from src/delly.cpp:18: /usr/include/boost/math/tools/config.hpp:23:6: warning: #warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" [-Wcpp] 23 | # warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" | ^~~~~~~ In file included from src/util.h:15, from src/delly.h:32: src/tags.h:76:32: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 76 | struct SortSVs : public std::binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/string:49, from /usr/include/c++/13/bits/locale_classes.h:40, from /usr/include/c++/13/bits/ios_base.h:41, from /usr/include/c++/13/ios:44, from /usr/include/c++/13/ostream:40, from /usr/include/c++/13/iostream:41, from src/delly.cpp:3: /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ src/util.h:61:33: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 61 | struct SortCNVs : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from src/delly.h:35: src/coverage.h:51:31: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 51 | struct SortBp : public std::binary_function { | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from src/shortpe.h:36, from src/delly.h:38: src/junction.h:37:40: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 37 | struct SortSRBamRecord : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ src/junction.h:80:37: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 80 | struct SortJunction : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from src/shortpe.h:37: src/cluster.h:42:39: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 42 | struct SortBamRecords : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ src/cluster.h:71:40: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 71 | struct SortEdgeRecords : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from src/delly.cpp:21: src/merge.h:68:34: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 68 | struct SortIScores : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from src/coral.h:17, from src/delly.cpp:23: src/scan.h:33:39: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 33 | struct SortScanWindow : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from src/coral.h:19: src/cnv.h:42:41: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 42 | struct SortSVBreakpoint : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from src/pangenome.h:33, from src/delly.cpp:26: src/gfa.h:43:34: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 43 | struct SortLinks : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from src/pangenome.h:34: src/gaf.h:41:40: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 41 | struct SortAlignRecord : public std::binary_function { | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from src/delly.cpp:27: src/markdup.h:62:37: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 62 | struct SortSVEvents : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from src/delly.cpp:28: src/compvcf.h:65:41: warning: 'template struct std::binary_function' is deprecated [-Wdeprecated-declarations] 65 | struct SortCompSVRecord : public std::binary_function | ^~~~~~~~~~~~~~~ /usr/include/c++/13/bits/stl_function.h:131:12: note: declared here 131 | struct binary_function | ^~~~~~~~~~~~~~~ In file included from /usr/include/x86_64-linux-gnu/c++/13/bits/c++allocator.h:33, from /usr/include/c++/13/bits/allocator.h:46, from /usr/include/c++/13/string:43: In member function 'void std::__new_allocator<_Tp>::construct(_Up*, _Args&& ...) [with _Up = char; _Args = {}; _Tp = char]', inlined from 'typename std::enable_if::value>::type boost::allocator_construct(A&, T*, Args&& ...) [with A = std::allocator; T = char; Args = {}]' at /usr/include/boost/core/allocator_access.hpp:521:16, inlined from 'void boost::allocator_construct_n(A&, T*, std::size_t) [with A = std::allocator; T = char]' at /usr/include/boost/core/allocator_access.hpp:737:35, inlined from 'void boost::alloc_construct_n(A&, T*, std::size_t) [with A = std::allocator; T = char]' at /usr/include/boost/core/alloc_construct.hpp:76:33, inlined from 'void boost::multi_array::allocate_space() [with T = char; long unsigned int NumDims = 2; Allocator = std::allocator]' at /usr/include/boost/multi_array.hpp:548:29, inlined from 'boost::multi_array::multi_array(const Allocator&) [with T = char; long unsigned int NumDims = 2; Allocator = std::allocator]' at /usr/include/boost/multi_array.hpp:156:19: /usr/include/c++/13/bits/new_allocator.h:191:11: warning: 'void* __builtin_memset(void*, int, long unsigned int)' offset 0 is out of the bounds [0, 0] [-Warray-bounds=] 191 | { ::new((void *)__p) _Up(std::forward<_Args>(__args)...); } | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/vector:66, from /usr/include/boost/graph/adjacency_list.hpp:16, from src/delly.h:8: In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = torali::ReadCount; _Alloc = std::allocator]', inlined from 'int32_t torali::runAsm(TConfig&) [with TConfig = AsmConfig]' at src/asmode.h:399:26: /usr/include/c++/13/bits/stl_vector.h:1034:25: warning: '' may be used uninitialized [-Wmaybe-uninitialized] 1034 | _M_fill_insert(end(), __new_size - size(), __x); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/vector:72: /usr/include/c++/13/bits/vector.tcc: In function 'int32_t torali::runAsm(TConfig&) [with TConfig = AsmConfig]': /usr/include/c++/13/bits/vector.tcc:529:5: note: by argument 4 of type 'const std::vector::value_type&' {aka 'const torali::ReadCount&'} to 'void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = torali::ReadCount; _Alloc = std::allocator]' declared here 529 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from src/delly.cpp:24: src/asmode.h:399:39: note: '' declared here 399 | rcMap[file_c].resize(svs.size(), ReadCount()); | ^~~~~~~~~~~ In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = torali::ReadCount; _Alloc = std::allocator]', inlined from 'void torali::annotateCoverage(TConfig&, TSampleLibrary&, TSVs&, TCoverageCount&, TCountMap&, TSpanMap&) [with TConfig = Config; TSampleLibrary = std::vector; TSVs = std::vector; TCoverageCount = std::vector >; TCountMap = std::vector >; TSpanMap = std::vector >]' at src/coverage.h:265:30: /usr/include/c++/13/bits/stl_vector.h:1034:25: warning: '' may be used uninitialized [-Wmaybe-uninitialized] 1034 | _M_fill_insert(end(), __new_size - size(), __x); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/vector.tcc: In function 'void torali::annotateCoverage(TConfig&, TSampleLibrary&, TSVs&, TCoverageCount&, TCountMap&, TSpanMap&) [with TConfig = Config; TSampleLibrary = std::vector; TSVs = std::vector; TCoverageCount = std::vector >; TCountMap = std::vector >; TSpanMap = std::vector >]': /usr/include/c++/13/bits/vector.tcc:529:5: note: by argument 4 of type 'const std::vector::value_type&' {aka 'const torali::ReadCount&'} to 'void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = torali::ReadCount; _Alloc = std::allocator]' declared here 529 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ src/coverage.h:265:43: note: '' declared here 265 | covCount[file_c].resize(svs.size(), TCovPair()); | ^~~~~~~~~~ In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = torali::ReadCount; _Alloc = std::allocator]', inlined from 'int32_t torali::runTegua(TConfig&) [with TConfig = TeguaConfig]' at src/tegua.h:166:26: /usr/include/c++/13/bits/stl_vector.h:1034:25: warning: '' may be used uninitialized [-Wmaybe-uninitialized] 1034 | _M_fill_insert(end(), __new_size - size(), __x); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/vector.tcc: In function 'int32_t torali::runTegua(TConfig&) [with TConfig = TeguaConfig]': /usr/include/c++/13/bits/vector.tcc:529:5: note: by argument 4 of type 'const std::vector::value_type&' {aka 'const torali::ReadCount&'} to 'void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = torali::ReadCount; _Alloc = std::allocator]' declared here 529 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from src/delly.cpp:22: src/tegua.h:166:39: note: '' declared here 166 | rcMap[file_c].resize(svs.size(), ReadCount()); | ^~~~~~~~~~~ In member function 'void std::vector<_Tp, _Alloc>::resize(size_type, const value_type&) [with _Tp = torali::ReadCount; _Alloc = std::allocator]', inlined from 'int32_t torali::runGraph(TConfig&) [with TConfig = GraphConfig]' at src/pangenome.h:772:26: /usr/include/c++/13/bits/stl_vector.h:1034:25: warning: '' may be used uninitialized [-Wmaybe-uninitialized] 1034 | _M_fill_insert(end(), __new_size - size(), __x); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/vector.tcc: In function 'int32_t torali::runGraph(TConfig&) [with TConfig = GraphConfig]': /usr/include/c++/13/bits/vector.tcc:529:5: note: by argument 4 of type 'const std::vector::value_type&' {aka 'const torali::ReadCount&'} to 'void std::vector<_Tp, _Alloc>::_M_fill_insert(iterator, size_type, const value_type&) [with _Tp = torali::ReadCount; _Alloc = std::allocator]' declared here 529 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ src/pangenome.h:772:39: note: '' declared here 772 | rcMap[file_c].resize(svs.size(), ReadCount()); | ^~~~~~~~~~~ make[2]: Leaving directory '/build/reproducible-path/delly-1.1.8' chrpath -d src/delly make[1]: Leaving directory '/build/reproducible-path/delly-1.1.8' dh_auto_test create-stamp debian/debhelper-build-stamp dh_prep debian/rules override_dh_auto_install make[1]: Entering directory '/build/reproducible-path/delly-1.1.8' # avoiding redundant compile of delly make[1]: Leaving directory '/build/reproducible-path/delly-1.1.8' dh_install dh_installdocs dh_installchangelogs dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'delly-dbgsym' in '../delly-dbgsym_1.1.8-1_amd64.deb'. dpkg-deb: building package 'delly' in '../delly_1.1.8-1_amd64.deb'. dpkg-genbuildinfo --build=binary -O../delly_1.1.8-1_amd64.buildinfo dpkg-genchanges --build=binary -O../delly_1.1.8-1_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/4055506 and its subdirectories I: Current time: Wed Jun 4 00:18:55 -12 2025 I: pbuilder-time-stamp: 1749039535 Thu May 2 05:55:57 UTC 2024 I: 1st build successful. Starting 2nd build on remote node infom01-amd64.debian.net. Thu May 2 05:55:57 UTC 2024 I: Preparing to do remote build '2' on infom01-amd64.debian.net. Thu May 2 06:00:07 UTC 2024 I: Deleting $TMPDIR on infom01-amd64.debian.net. Thu May 2 06:00:08 UTC 2024 I: delly_1.1.8-1_amd64.changes: Format: 1.8 Date: Thu, 12 Oct 2023 14:40:44 +0000 Source: delly Binary: delly delly-dbgsym Architecture: amd64 Version: 1.1.8-1 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Mohammed Bilal Description: delly - Structural variant discovery by read analysis Changes: delly (1.1.8-1) unstable; urgency=medium . * Team upload. * New upstream version * Standards-Version: 4.6.2 (routine-update) Checksums-Sha1: ff3c4092e33b929247a999ebcc9d24b8b308d9dc 5923556 delly-dbgsym_1.1.8-1_amd64.deb 98d60f25f4a729be8b5947fe02c3797521a1f2f9 7105 delly_1.1.8-1_amd64.buildinfo 92348be9921e45f7c934aaba6ee2e984853f4409 403216 delly_1.1.8-1_amd64.deb Checksums-Sha256: 543dd0b9bc95b2bb272f300e75fa37a236d583d50db4a876dfbf935b3b31f7ed 5923556 delly-dbgsym_1.1.8-1_amd64.deb 86639872da9704c3ef3ec515af7a1c3504afb94e33e34079573b22fef599dbe5 7105 delly_1.1.8-1_amd64.buildinfo 689e6a4738a18fc14efc76023b3e13e5e06486c110ae4bcfaf3c63412614897b 403216 delly_1.1.8-1_amd64.deb Files: f0db44c2de63ea0a2da9eff5a339b084 5923556 debug optional delly-dbgsym_1.1.8-1_amd64.deb 13bea4550d38aaa4f0d84522764bcddd 7105 science optional delly_1.1.8-1_amd64.buildinfo dac1e3aaf32a288e41cdce3c1b4b0d07 403216 science optional delly_1.1.8-1_amd64.deb Thu May 2 06:00:09 UTC 2024 I: diffoscope 265 will be used to compare the two builds: Running as unit: rb-diffoscope-amd64_34-9031.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.b2zavsuP/delly_1.1.8-1.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.b2zavsuP/delly_1.1.8-1.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.b2zavsuP/delly_1.1.8-1.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.b2zavsuP/b1/delly_1.1.8-1_amd64.changes /srv/reproducible-results/rbuild-debian/r-b-build.b2zavsuP/b2/delly_1.1.8-1_amd64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.442s) 0.442s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.082s) 0.082s 12 calls diffoscope.comparators.binary.FilesystemFile ## specialize (total time: 0.000s) 0.000s 1 call specialize Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 809ms CPU time consumed: 810ms Thu May 2 06:00:11 UTC 2024 I: diffoscope 265 found no differences in the changes files, and a .buildinfo file also exists. Thu May 2 06:00:11 UTC 2024 I: delly from trixie built successfully and reproducibly on amd64. Thu May 2 06:00:13 UTC 2024 I: Submitting .buildinfo files to external archives: Thu May 2 06:00:13 UTC 2024 I: Submitting 8.0K b1/delly_1.1.8-1_amd64.buildinfo.asc Thu May 2 06:00:14 UTC 2024 I: Submitting 8.0K b2/delly_1.1.8-1_amd64.buildinfo.asc Thu May 2 06:00:16 UTC 2024 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Thu May 2 06:00:16 UTC 2024 I: Done submitting .buildinfo files. Thu May 2 06:00:16 UTC 2024 I: Removing signed delly_1.1.8-1_amd64.buildinfo.asc files: removed './b1/delly_1.1.8-1_amd64.buildinfo.asc' removed './b2/delly_1.1.8-1_amd64.buildinfo.asc'