Sat Oct 26 00:33:54 UTC 2024 I: starting to build dazzdb/trixie/amd64 on jenkins on '2024-10-26 00:33' Sat Oct 26 00:33:54 UTC 2024 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/amd64_12/35504/console.log Sat Oct 26 00:33:54 UTC 2024 I: Downloading source for trixie/dazzdb=1.0+git20240115.be65e59-1 --2024-10-26 00:33:54-- http://deb.debian.org/debian/pool/main/d/dazzdb/dazzdb_1.0%2bgit20240115.be65e59-1.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2295 (2.2K) [text/prs.lines.tag] Saving to: ‘dazzdb_1.0+git20240115.be65e59-1.dsc’ 0K .. 100% 333M=0s 2024-10-26 00:33:54 (333 MB/s) - ‘dazzdb_1.0+git20240115.be65e59-1.dsc’ saved [2295/2295] Sat Oct 26 00:33:54 UTC 2024 I: dazzdb_1.0+git20240115.be65e59-1.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: dazzdb Binary: dazzdb Architecture: any Version: 1.0+git20240115.be65e59-1 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille , Pranav Ballaney , Étienne Mollier Homepage: https://github.com/thegenemyers/DAZZ_DB Standards-Version: 4.7.0 Vcs-Browser: https://salsa.debian.org/med-team/dazzdb Vcs-Git: https://salsa.debian.org/med-team/dazzdb.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13), zlib1g-dev Package-List: dazzdb deb science optional arch=any Checksums-Sha1: 2882e02f54f491edfc54314b54a671c115147ea0 98924 dazzdb_1.0+git20240115.be65e59.orig.tar.xz 25a398156d22129975abcdbafae53ce0af828825 7068 dazzdb_1.0+git20240115.be65e59-1.debian.tar.xz Checksums-Sha256: 41e3f85500c25f133375854b9c40d274b3d6ddf3a1638d57cf0862393168e16a 98924 dazzdb_1.0+git20240115.be65e59.orig.tar.xz 33b55eedd4ba96b69f0aa9eb76f0ce91b11d3ed3f178f80e773f29d83d379385 7068 dazzdb_1.0+git20240115.be65e59-1.debian.tar.xz Files: 358f0e5aba3074d1aecf6a3bab2da9a3 98924 dazzdb_1.0+git20240115.be65e59.orig.tar.xz 8a764a5bbac216af15baca205ce8b6d3 7068 dazzdb_1.0+git20240115.be65e59-1.debian.tar.xz Dgit: 0033c5ae42a8f0411329f78bc8f2c97f0802f6c6 debian archive/debian/1.0+git20240115.be65e59-1 https://git.dgit.debian.org/dazzdb -----BEGIN PGP SIGNATURE----- iQJIBAEBCgAyFiEEj5GyJ8fW8rGUjII2eTz2fo8NEdoFAmZWPyMUHGVtb2xsaWVy QGRlYmlhbi5vcmcACgkQeTz2fo8NEdrr3g//T4rzgtmBaTQOIxOkA2zaH837oUfQ 6lYs+8Vxk6ypdaewOFv7C/ALwOCkbHnlgiUTibBjvaJVpT4vDjz9foO64n2aIIIC D9hb9UMaQYQiDoYlbUuyGmVnV7C2IByyCtS/QGf2VQGlAFPRh/Jgeeh58Lour7/B lj7GCsYXXG3JXUziknqQI0lzuTD2oJg0hwFpYx5afttlRPaWU1xIGihRKVHJFV0P RVlU4DKvZzUSkTvTFYqUt8j5pj2hLDpV8Hot28SdoS2Q6p9dgsJFp29VC/vnmoCi kudjbu8hXrwVD/TWBgR4GhrIKFHPgGk3ll1BDDOILsZgdU+4Oe0L2qmNktijkJak oWs0rhjAMhRNKIUyH/xwrKMLvG4TKp3HQnZGCWM9uN8zIbf1r8uTkGQVDiERNrd/ sseuCqJ/CzzC7J05cc6KCVYDbeeKt6nGTEiJzD5s/F+ikMIHKQlUgcTJ7ruXbJg8 z1ALSkHbUV4wElLNpPpraSj/zwV2DAINWu7jwUu2r0Fg2yyYxFVFyFfwQ0ID3fKt Ri0nK9ovP9pC7FIrfCNMaCzMZX59Xi4SnAKaeg+veWjLzj0VQ1S1CUgTEiyu14sN e7SmvdMxOEJ1UI1T108k6lQmoAz7nElAf90eeD3bnxJymet2fPtYDnqEm/Pl3vgG BEwIxzjnzT88HVA= =5quM -----END PGP SIGNATURE----- Sat Oct 26 00:33:54 UTC 2024 I: Checking whether the package is not for us Sat Oct 26 00:33:54 UTC 2024 I: Starting 1st build on remote node ionos15-amd64.debian.net. Sat Oct 26 00:33:54 UTC 2024 I: Preparing to do remote build '1' on ionos15-amd64.debian.net. Sat Oct 26 00:34:58 UTC 2024 I: Deleting $TMPDIR on ionos15-amd64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Thu Nov 27 18:56:56 -12 2025 I: pbuilder-time-stamp: 1764313016 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/trixie-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [dazzdb_1.0+git20240115.be65e59-1.dsc] I: copying [./dazzdb_1.0+git20240115.be65e59.orig.tar.xz] I: copying [./dazzdb_1.0+git20240115.be65e59-1.debian.tar.xz] I: Extracting source gpgv: Signature made Tue May 28 20:31:31 2024 gpgv: using RSA key 8F91B227C7D6F2B1948C8236793CF67E8F0D11DA gpgv: issuer "emollier@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./dazzdb_1.0+git20240115.be65e59-1.dsc: no acceptable signature found dpkg-source: info: extracting dazzdb in dazzdb-1.0+git20240115.be65e59 dpkg-source: info: unpacking dazzdb_1.0+git20240115.be65e59.orig.tar.xz dpkg-source: info: unpacking dazzdb_1.0+git20240115.be65e59-1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying append-cflags.patch dpkg-source: info: applying compiler-flags.patch dpkg-source: info: applying destdir.patch dpkg-source: info: applying use-after-free.patch dpkg-source: info: applying fix-declaration.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/3309259/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='amd64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=42 ' DISTRIBUTION='trixie' HOME='/root' HOST_ARCH='amd64' IFS=' ' INVOCATION_ID='e7dfa8d1df934c5d87be9eccce0b82d9' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='3309259' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.QTtmAGtS/pbuilderrc_6F18 --distribution trixie --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/trixie-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.QTtmAGtS/b1 --logfile b1/build.log dazzdb_1.0+git20240115.be65e59-1.dsc' SUDO_GID='111' SUDO_UID='106' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://213.165.73.152:3128' I: uname -a Linux ionos15-amd64 6.10.11+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.10.11-1~bpo12+1 (2024-10-03) x86_64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 4 2024 /bin -> usr/bin I: user script /srv/workspace/pbuilder/3309259/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), zlib1g-dev dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19945 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on zlib1g-dev; however: Package zlib1g-dev is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libdebhelper-perl{a} libelf1t64{a} libfile-stripnondeterminism-perl{a} libicu72{a} libmagic-mgc{a} libmagic1t64{a} libpipeline1{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 30 newly installed, 0 to remove and 0 not upgraded. Need to get 20.7 MB of archives. After unpacking 76.8 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian trixie/main amd64 sensible-utils all 0.0.24 [24.8 kB] Get: 2 http://deb.debian.org/debian trixie/main amd64 libmagic-mgc amd64 1:5.45-3 [314 kB] Get: 3 http://deb.debian.org/debian trixie/main amd64 libmagic1t64 amd64 1:5.45-3 [105 kB] Get: 4 http://deb.debian.org/debian trixie/main amd64 file amd64 1:5.45-3 [42.9 kB] Get: 5 http://deb.debian.org/debian trixie/main amd64 gettext-base amd64 0.22.5-2 [200 kB] Get: 6 http://deb.debian.org/debian trixie/main amd64 libuchardet0 amd64 0.0.8-1+b1 [68.8 kB] Get: 7 http://deb.debian.org/debian trixie/main amd64 groff-base amd64 1.23.0-5 [1181 kB] Get: 8 http://deb.debian.org/debian trixie/main amd64 bsdextrautils amd64 2.40.2-9 [97.2 kB] Get: 9 http://deb.debian.org/debian trixie/main amd64 libpipeline1 amd64 1.5.8-1 [42.0 kB] Get: 10 http://deb.debian.org/debian trixie/main amd64 man-db amd64 2.13.0-1 [1420 kB] Get: 11 http://deb.debian.org/debian trixie/main amd64 m4 amd64 1.4.19-4 [287 kB] Get: 12 http://deb.debian.org/debian trixie/main amd64 autoconf all 2.72-3 [493 kB] Get: 13 http://deb.debian.org/debian trixie/main amd64 autotools-dev all 20220109.1 [51.6 kB] Get: 14 http://deb.debian.org/debian trixie/main amd64 automake all 1:1.16.5-1.3 [823 kB] Get: 15 http://deb.debian.org/debian trixie/main amd64 autopoint all 0.22.5-2 [723 kB] Get: 16 http://deb.debian.org/debian trixie/main amd64 libdebhelper-perl all 13.20 [89.7 kB] Get: 17 http://deb.debian.org/debian trixie/main amd64 libtool all 2.4.7-7 [517 kB] Get: 18 http://deb.debian.org/debian trixie/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 19 http://deb.debian.org/debian trixie/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 20 http://deb.debian.org/debian trixie/main amd64 libfile-stripnondeterminism-perl all 1.14.0-1 [19.5 kB] Get: 21 http://deb.debian.org/debian trixie/main amd64 dh-strip-nondeterminism all 1.14.0-1 [8448 B] Get: 22 http://deb.debian.org/debian trixie/main amd64 libelf1t64 amd64 0.191-2 [188 kB] Get: 23 http://deb.debian.org/debian trixie/main amd64 dwz amd64 0.15-1+b1 [110 kB] Get: 24 http://deb.debian.org/debian trixie/main amd64 libicu72 amd64 72.1-5 [9396 kB] Get: 25 http://deb.debian.org/debian trixie/main amd64 libxml2 amd64 2.12.7+dfsg+really2.9.14-0.1 [699 kB] Get: 26 http://deb.debian.org/debian trixie/main amd64 gettext amd64 0.22.5-2 [1601 kB] Get: 27 http://deb.debian.org/debian trixie/main amd64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 28 http://deb.debian.org/debian trixie/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 29 http://deb.debian.org/debian trixie/main amd64 debhelper all 13.20 [915 kB] Get: 30 http://deb.debian.org/debian trixie/main amd64 zlib1g-dev amd64 1:1.3.dfsg+really1.3.1-1 [919 kB] Fetched 20.7 MB in 0s (48.1 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package sensible-utils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19945 files and directories currently installed.) Preparing to unpack .../00-sensible-utils_0.0.24_all.deb ... Unpacking sensible-utils (0.0.24) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../01-libmagic-mgc_1%3a5.45-3_amd64.deb ... Unpacking libmagic-mgc (1:5.45-3) ... Selecting previously unselected package libmagic1t64:amd64. Preparing to unpack .../02-libmagic1t64_1%3a5.45-3_amd64.deb ... Unpacking libmagic1t64:amd64 (1:5.45-3) ... Selecting previously unselected package file. Preparing to unpack .../03-file_1%3a5.45-3_amd64.deb ... Unpacking file (1:5.45-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../04-gettext-base_0.22.5-2_amd64.deb ... Unpacking gettext-base (0.22.5-2) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../05-libuchardet0_0.0.8-1+b1_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.8-1+b1) ... Selecting previously unselected package groff-base. Preparing to unpack .../06-groff-base_1.23.0-5_amd64.deb ... Unpacking groff-base (1.23.0-5) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../07-bsdextrautils_2.40.2-9_amd64.deb ... Unpacking bsdextrautils (2.40.2-9) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../08-libpipeline1_1.5.8-1_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../09-man-db_2.13.0-1_amd64.deb ... Unpacking man-db (2.13.0-1) ... Selecting previously unselected package m4. Preparing to unpack .../10-m4_1.4.19-4_amd64.deb ... Unpacking m4 (1.4.19-4) ... Selecting previously unselected package autoconf. Preparing to unpack .../11-autoconf_2.72-3_all.deb ... Unpacking autoconf (2.72-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../12-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../13-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../14-autopoint_0.22.5-2_all.deb ... Unpacking autopoint (0.22.5-2) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../15-libdebhelper-perl_13.20_all.deb ... Unpacking libdebhelper-perl (13.20) ... Selecting previously unselected package libtool. Preparing to unpack .../16-libtool_2.4.7-7_all.deb ... Unpacking libtool (2.4.7-7) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../17-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../18-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../19-libfile-stripnondeterminism-perl_1.14.0-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.14.0-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../20-dh-strip-nondeterminism_1.14.0-1_all.deb ... Unpacking dh-strip-nondeterminism (1.14.0-1) ... Selecting previously unselected package libelf1t64:amd64. Preparing to unpack .../21-libelf1t64_0.191-2_amd64.deb ... Unpacking libelf1t64:amd64 (0.191-2) ... Selecting previously unselected package dwz. Preparing to unpack .../22-dwz_0.15-1+b1_amd64.deb ... Unpacking dwz (0.15-1+b1) ... Selecting previously unselected package libicu72:amd64. Preparing to unpack .../23-libicu72_72.1-5_amd64.deb ... Unpacking libicu72:amd64 (72.1-5) ... Selecting previously unselected package libxml2:amd64. Preparing to unpack .../24-libxml2_2.12.7+dfsg+really2.9.14-0.1_amd64.deb ... Unpacking libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.1) ... Selecting previously unselected package gettext. Preparing to unpack .../25-gettext_0.22.5-2_amd64.deb ... Unpacking gettext (0.22.5-2) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../26-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../27-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../28-debhelper_13.20_all.deb ... Unpacking debhelper (13.20) ... Selecting previously unselected package zlib1g-dev:amd64. Preparing to unpack .../29-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1_amd64.deb ... Unpacking zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1) ... Setting up libpipeline1:amd64 (1.5.8-1) ... Setting up libicu72:amd64 (72.1-5) ... Setting up bsdextrautils (2.40.2-9) ... Setting up libmagic-mgc (1:5.45-3) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.20) ... Setting up libmagic1t64:amd64 (1:5.45-3) ... Setting up gettext-base (0.22.5-2) ... Setting up m4 (1.4.19-4) ... Setting up file (1:5.45-3) ... Setting up libelf1t64:amd64 (0.191-2) ... Setting up autotools-dev (20220109.1) ... Setting up autopoint (0.22.5-2) ... Setting up autoconf (2.72-3) ... Setting up zlib1g-dev:amd64 (1:1.3.dfsg+really1.3.1-1) ... Setting up dwz (0.15-1+b1) ... Setting up sensible-utils (0.0.24) ... Setting up libuchardet0:amd64 (0.0.8-1+b1) ... Setting up libxml2:amd64 (2.12.7+dfsg+really2.9.14-0.1) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.14.0-1) ... Setting up gettext (0.22.5-2) ... Setting up libtool (2.4.7-7) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up dh-strip-nondeterminism (1.14.0-1) ... Setting up groff-base (1.23.0-5) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.13.0-1) ... Not building database; man-db/auto-update is not 'true'. Setting up debhelper (13.20) ... Processing triggers for libc-bin (2.40-3) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/dazzdb-1.0+git20240115.be65e59/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../dazzdb_1.0+git20240115.be65e59-1_source.changes dpkg-buildpackage: info: source package dazzdb dpkg-buildpackage: info: source version 1.0+git20240115.be65e59-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Étienne Mollier dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean dh_auto_clean make -j42 clean make[1]: Entering directory '/build/reproducible-path/dazzdb-1.0+git20240115.be65e59' rm -f fasta2DB DB2fasta quiva2DB DB2quiva DBsplit DBdust Catrack DBshow DBstats DBrm DBmv DBcp simulator fasta2DAM DAM2fasta rangen arrow2DB DB2arrow DBwipe DBtrim DB2ONE rm -fr *.dSYM rm -f dazz.db.tar.gz make[1]: Leaving directory '/build/reproducible-path/dazzdb-1.0+git20240115.be65e59' dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf dh_auto_configure dh_auto_build make -j42 "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/reproducible-path/dazzdb-1.0+git20240115.be65e59' cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now fasta2DB.c DB.c DB.h QV.c QV.h -lm -lz -o fasta2DB cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DB2fasta.c DB.c DB.h QV.c QV.h -lm -lz -o DB2fasta cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -DINTERACTIVE -Wl,-z,relro -Wl,-z,now quiva2DB.c DB.c DB.h QV.c QV.h -lm -lz -o quiva2DB cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DB2quiva.c DB.c DB.h QV.c QV.h -lm -lz -o DB2quiva cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DBsplit.c DB.c DB.h QV.c QV.h -lm -lz -o DBsplit cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DBdust.c DB.c DB.h QV.c QV.h -lm -lz -o DBdust cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now Catrack.c DB.c DB.h QV.c QV.h -lm -lz -o Catrack cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DBshow.c DB.c DB.h QV.c QV.h -lm -lz -o DBshow cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DBstats.c DB.c DB.h QV.c QV.h -lm -lz -o DBstats cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DBrm.c DB.c DB.h QV.c QV.h -lm -lz -o DBrm cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -DMOVE -Wl,-z,relro -Wl,-z,now DBmv.c DB.c DB.h QV.c QV.h -lm -lz -o DBmv cc -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wl,-z,relro -Wl,-z,now -o DBcp DBmv.c DB.c DB.h QV.c QV.h -lm -lz cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now simulator.c DB.c DB.h QV.c QV.h -lm -lz -o simulator cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now fasta2DAM.c DB.c DB.h QV.c QV.h -lm -lz -o fasta2DAM cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DAM2fasta.c DB.c DB.h QV.c QV.h -lm -lz -o DAM2fasta cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now rangen.c -o rangen cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now arrow2DB.c DB.c QV.c DB.h QV.h -lm -lz -o arrow2DB cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DB2arrow.c DB.c QV.c DB.h QV.h -lm -lz -o DB2arrow cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DBwipe.c DB.c DB.h QV.c QV.h -lm -lz -o DBwipe cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DBtrim.c DB.c DB.h QV.c QV.h -lm -lz -o DBtrim cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/dazzdb-1.0+git20240115.be65e59=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -fcf-protection -O3 -Wall -Wextra -Wno-unused-result -fno-strict-aliasing -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now DB2ONE.c DB.c DB.h QV.c QV.h ONElib.c ONElib.h -lm -lz -o DB2ONE In file included from /usr/include/stdio.h:970, from fasta2DB.c:24: In function 'fprintf', inlined from 'main' at fasta2DB.c:438:15: /usr/include/x86_64-linux-gnu/bits/stdio2.h:111:10: warning: 'fname' may be used uninitialized [-Wmaybe-uninitialized] 111 | return __fprintf_chk (__stream, __USE_FORTIFY_LEVEL - 1, __fmt, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ fasta2DB.c: In function 'main': fasta2DB.c:363:29: note: 'fname' was declared here 363 | char *path, *core, *fname; | ^~~~~ In file included from /usr/include/stdio.h:970, from fasta2DAM.c:24: In function 'fprintf', inlined from 'main' at fasta2DAM.c:400:21: /usr/include/x86_64-linux-gnu/bits/stdio2.h:111:10: warning: 'fname' may be used uninitialized [-Wmaybe-uninitialized] 111 | return __fprintf_chk (__stream, __USE_FORTIFY_LEVEL - 1, __fmt, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ fasta2DAM.c: In function 'main': fasta2DAM.c:350:29: note: 'fname' was declared here 350 | char *path, *core, *fname; | ^~~~~ ONElib.c: In function 'intGet': ONElib.c:3489:7: warning: this statement may fall through [-Wimplicit-fallthrough=] 3489 | switch (u[0] & 0x07) | ^~~~~~ ONElib.c:3500:5: note: here 3500 | case 4: | ^~~~ ONElib.c: In function 'ltfRead': ONElib.c:3565:10: warning: 'val' may be used uninitialized [-Wmaybe-uninitialized] 3565 | return val ; | ^~~ ONElib.c:3545:7: note: 'val' was declared here 3545 | I64 val ; | ^~~ make[1]: Leaving directory '/build/reproducible-path/dazzdb-1.0+git20240115.be65e59' dh_auto_test create-stamp debian/debhelper-build-stamp dh_prep debian/rules override_dh_auto_install make[1]: Entering directory '/build/reproducible-path/dazzdb-1.0+git20240115.be65e59' dh_auto_install make -j42 install DESTDIR=/build/reproducible-path/dazzdb-1.0\+git20240115.be65e59/debian/dazzdb AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[2]: Entering directory '/build/reproducible-path/dazzdb-1.0+git20240115.be65e59' install -d /build/reproducible-path/dazzdb-1.0+git20240115.be65e59/debian/dazzdb/usr/bin install fasta2DB DB2fasta quiva2DB DB2quiva DBsplit DBdust Catrack DBshow DBstats DBrm DBmv DBcp simulator fasta2DAM DAM2fasta rangen arrow2DB DB2arrow DBwipe DBtrim DB2ONE /build/reproducible-path/dazzdb-1.0+git20240115.be65e59/debian/dazzdb/usr/bin make[2]: Leaving directory '/build/reproducible-path/dazzdb-1.0+git20240115.be65e59' cd /build/reproducible-path/dazzdb-1.0+git20240115.be65e59/debian/dazzdb/usr/bin && mv simulator dsimulator mkdir -p /build/reproducible-path/dazzdb-1.0+git20240115.be65e59/debian/dazzdb/usr/share/man/man1 for command in /build/reproducible-path/dazzdb-1.0+git20240115.be65e59/debian/dazzdb/usr/bin/*; \ do \ ln -s dazzdb.1 \ /build/reproducible-path/dazzdb-1.0+git20240115.be65e59/debian/dazzdb/usr/share/man/man1/$(basename $command).1; \ done make[1]: Leaving directory '/build/reproducible-path/dazzdb-1.0+git20240115.be65e59' dh_installdocs dh_installchangelogs dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'dazzdb' in '../dazzdb_1.0+git20240115.be65e59-1_amd64.deb'. dpkg-deb: building package 'dazzdb-dbgsym' in '../dazzdb-dbgsym_1.0+git20240115.be65e59-1_amd64.deb'. dpkg-genbuildinfo --build=binary -O../dazzdb_1.0+git20240115.be65e59-1_amd64.buildinfo dpkg-genchanges --build=binary -O../dazzdb_1.0+git20240115.be65e59-1_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/3309259 and its subdirectories I: Current time: Thu Nov 27 18:57:57 -12 2025 I: pbuilder-time-stamp: 1764313077 Sat Oct 26 00:34:59 UTC 2024 I: 1st build successful. Starting 2nd build on remote node ionos1-amd64.debian.net. Sat Oct 26 00:34:59 UTC 2024 I: Preparing to do remote build '2' on ionos1-amd64.debian.net. Sat Oct 26 00:38:26 UTC 2024 I: Deleting $TMPDIR on ionos1-amd64.debian.net. Sat Oct 26 00:38:27 UTC 2024 I: dazzdb_1.0+git20240115.be65e59-1_amd64.changes: Format: 1.8 Date: Tue, 28 May 2024 22:26:18 +0200 Source: dazzdb Binary: dazzdb dazzdb-dbgsym Architecture: amd64 Version: 1.0+git20240115.be65e59-1 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Étienne Mollier Description: dazzdb - manage nucleotide sequencing read data Changes: dazzdb (1.0+git20240115.be65e59-1) unstable; urgency=medium . * New upstream version 1.0+git20240115.be65e59 * d/control: declare compliance to standards version 4.7.0. * d/t/run-unit-test: update expected program output. Checksums-Sha1: 530462403c81363d13153e708d3470aeedf1e724 1747408 dazzdb-dbgsym_1.0+git20240115.be65e59-1_amd64.deb 3c3d6370ddc8545fe444b7cd54b63949aaaf9453 5066 dazzdb_1.0+git20240115.be65e59-1_amd64.buildinfo ada2f247e2352bb02d9904f590c48d3580f4f403 226200 dazzdb_1.0+git20240115.be65e59-1_amd64.deb Checksums-Sha256: 17eceb7a8d6d2a1968a5f092f1af8b8239d86bd6d276957e73bbc5c67d4f8f4e 1747408 dazzdb-dbgsym_1.0+git20240115.be65e59-1_amd64.deb fa14f50489f1e27d8b83bc663e657a1bd65da3a840afee96c1bb7f58d8e173f6 5066 dazzdb_1.0+git20240115.be65e59-1_amd64.buildinfo c39210ab86a44cf874b6026cdd4927fe81550b06de6ae7a64c2ed326d759e088 226200 dazzdb_1.0+git20240115.be65e59-1_amd64.deb Files: 9bb57e007c27c9c5c9461aa740cf6dcf 1747408 debug optional dazzdb-dbgsym_1.0+git20240115.be65e59-1_amd64.deb b57abb4033a35640a0b8353c5960c7bd 5066 science optional dazzdb_1.0+git20240115.be65e59-1_amd64.buildinfo f651e9c10c45b8ceeebd163112440130 226200 science optional dazzdb_1.0+git20240115.be65e59-1_amd64.deb Sat Oct 26 00:38:29 UTC 2024 I: diffoscope 281 will be used to compare the two builds: Running as unit: rb-diffoscope-amd64_12-35504.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.QTtmAGtS/dazzdb_1.0+git20240115.be65e59-1.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.QTtmAGtS/dazzdb_1.0+git20240115.be65e59-1.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.QTtmAGtS/dazzdb_1.0+git20240115.be65e59-1.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.QTtmAGtS/b1/dazzdb_1.0+git20240115.be65e59-1_amd64.changes /srv/reproducible-results/rbuild-debian/r-b-build.QTtmAGtS/b2/dazzdb_1.0+git20240115.be65e59-1_amd64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.476s) 0.476s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.040s) 0.040s 12 calls diffoscope.comparators.binary.FilesystemFile ## specialize (total time: 0.000s) 0.000s 1 call specialize Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 868ms CPU time consumed: 870ms Sat Oct 26 00:38:30 UTC 2024 I: diffoscope 281 found no differences in the changes files, and a .buildinfo file also exists. Sat Oct 26 00:38:30 UTC 2024 I: dazzdb from trixie built successfully and reproducibly on amd64. Sat Oct 26 00:38:31 UTC 2024 I: Submitting .buildinfo files to external archives: Sat Oct 26 00:38:31 UTC 2024 I: Submitting 8.0K b1/dazzdb_1.0+git20240115.be65e59-1_amd64.buildinfo.asc Sat Oct 26 00:38:33 UTC 2024 I: Submitting 8.0K b2/dazzdb_1.0+git20240115.be65e59-1_amd64.buildinfo.asc Sat Oct 26 00:38:34 UTC 2024 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Sat Oct 26 00:38:34 UTC 2024 I: Done submitting .buildinfo files. Sat Oct 26 00:38:34 UTC 2024 I: Removing signed dazzdb_1.0+git20240115.be65e59-1_amd64.buildinfo.asc files: removed './b1/dazzdb_1.0+git20240115.be65e59-1_amd64.buildinfo.asc' removed './b2/dazzdb_1.0+git20240115.be65e59-1_amd64.buildinfo.asc'