Fri Sep 26 12:45:40 UTC 2025 I: starting to build libslow5lib/forky/arm64 on jenkins on '2025-09-26 12:45' Fri Sep 26 12:45:40 UTC 2025 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/arm64_4/99703/console.log Fri Sep 26 12:45:40 UTC 2025 I: Downloading source for forky/libslow5lib=0.7.0+dfsg-3 --2025-09-26 12:45:40-- http://deb.debian.org/debian/pool/main/libs/libslow5lib/libslow5lib_0.7.0%2bdfsg-3.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2584 (2.5K) [text/prs.lines.tag] Saving to: ‘libslow5lib_0.7.0+dfsg-3.dsc’ 0K .. 100% 309M=0s 2025-09-26 12:45:40 (309 MB/s) - ‘libslow5lib_0.7.0+dfsg-3.dsc’ saved [2584/2584] Fri Sep 26 12:45:40 UTC 2025 I: libslow5lib_0.7.0+dfsg-3.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: libslow5lib Binary: libslow5-0t64, libslow5-dev, python3-slow5 Architecture: any Version: 0.7.0+dfsg-3 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille , Étienne Mollier Homepage: https://github.com/hasindu2008/slow5lib Standards-Version: 4.7.0 Vcs-Browser: https://salsa.debian.org/med-team/libslow5lib Vcs-Git: https://salsa.debian.org/med-team/libslow5lib.git Testsuite: autopkgtest Testsuite-Triggers: build-essential, libstreamvbyte-dev, python3-all, zlib1g-dev Build-Depends: dpkg-dev (>= 1.22.5), debhelper-compat (= 13), cmake, d-shlibs (>= 0.106~), dh-python, python3-all-dev, libstreamvbyte-dev, libzstd-dev, zlib1g-dev, cython3, python3-setuptools, python3-numpy, python3-wheel Package-List: libslow5-0t64 deb libs optional arch=any libslow5-dev deb libdevel optional arch=any python3-slow5 deb python optional arch=any Checksums-Sha1: cbad8da474b7d88ed5f766eaa2d9db2c85e1f3a3 2014308 libslow5lib_0.7.0+dfsg.orig.tar.xz ce7ad4d4a6430f9976ec1112e0cd228449696a2b 8348 libslow5lib_0.7.0+dfsg-3.debian.tar.xz Checksums-Sha256: 8a60fc89a8a641bb49c6ad3c308371d7152c61756aa67c1946b3d87f49364d3d 2014308 libslow5lib_0.7.0+dfsg.orig.tar.xz 86f7e4fc9c2e8fce922fd3c70458ac1acb47ca36a0df439377dd5ce9da89497d 8348 libslow5lib_0.7.0+dfsg-3.debian.tar.xz Files: 9bfd15ff3ab3938925d84fea770a8848 2014308 libslow5lib_0.7.0+dfsg.orig.tar.xz a57a415a580274851179a1f061247bf0 8348 libslow5lib_0.7.0+dfsg-3.debian.tar.xz Dgit: 52759902858a10731b15859bf5ad7b370cc0670c debian archive/debian/0.7.0+dfsg-3 https://git.dgit.debian.org/libslow5lib -----BEGIN PGP SIGNATURE----- iQJIBAEBCgAyFiEEj5GyJ8fW8rGUjII2eTz2fo8NEdoFAmahZ5sUHGVtb2xsaWVy QGRlYmlhbi5vcmcACgkQeTz2fo8NEdrUyhAAt/Yp06I++HgNaCe330UleTyGCuER 4p5qpGCo8zYF29WUFiOon2LyJhthotla+ZK1vl6jhpAUjQCUvC+JsPtZFWspEhhi IN8R0qd+MMB+68E8SwBNPacmfvwkhyDIARrhj8g75q9gpGFCM7dU5muHIEtUZsaL EDjbgbT476b3dQBUcZE6pSExNfpFfBvxsIxX9Ucy8xG841bd99fSYagFo891TuLe Zf9PIDeN8MsuuyLTWjBqEpAxqcjbO3OAFX7E4k4F/OJVCAIPhkfcjnG6tL6Iqg0c 4lK/O7v+wGVgf/ljqTP/24CyW3RlBWgIIFdT9HKJjD095G2sAHLMxzYJKC1UUKTV 4IfBsW2em+MCoIs1jrjDm8Tz9njq9rm/RxhLdGsq4mURlvOkadTpFG6xPjkqmJCa jfEesj9P0moIaUklUdzeXN7Gc2oq0nfMgrDdYw1qBp8A8f3efLxjXpjRAry+S1Aw CKz8E9MSMXnpKoq9F1VE8h6/x4aAx1PBuju5k3hsrwEVkdxkgQVLeiHWHXCi6G3C wG8Sy3jkJNs2HAMrHptmFQrHYYN6Dztx5bxxDMNr2ShmDQQi1RwAuEJ+T6tlwa7F N1vFp2OF+jEo5saX0noC6+xQk3CB3BbHWJLscSS88OrB33A5ym3PHy1DHIL2606X dpB+a4Mq0QbPpoU= =Exg4 -----END PGP SIGNATURE----- Fri Sep 26 12:45:40 UTC 2025 I: Checking whether the package is not for us Fri Sep 26 12:45:40 UTC 2025 I: Starting 1st build on remote node codethink03-arm64.debian.net. Fri Sep 26 12:45:40 UTC 2025 I: Preparing to do remote build '1' on codethink03-arm64.debian.net. Fri Sep 26 12:47:24 UTC 2025 I: Deleting $TMPDIR on codethink03-arm64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Thu Oct 29 07:08:42 -12 2026 I: pbuilder-time-stamp: 1793300922 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/forky-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [libslow5lib_0.7.0+dfsg-3.dsc] I: copying [./libslow5lib_0.7.0+dfsg.orig.tar.xz] I: copying [./libslow5lib_0.7.0+dfsg-3.debian.tar.xz] I: Extracting source dpkg-source: warning: cannot verify inline signature for ./libslow5lib_0.7.0+dfsg-3.dsc: no acceptable signature found dpkg-source: info: extracting libslow5lib in libslow5lib-0.7.0+dfsg dpkg-source: info: unpacking libslow5lib_0.7.0+dfsg.orig.tar.xz dpkg-source: info: unpacking libslow5lib_0.7.0+dfsg-3.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying use_debian_packaged_streamvbyte.patch dpkg-source: info: applying enable_shared_and_static.patch dpkg-source: info: applying fix-baseline.patch dpkg-source: info: applying hardening.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/1374619/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='arm64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=12 ' DISTRIBUTION='forky' HOME='/root' HOST_ARCH='arm64' IFS=' ' INVOCATION_ID='1b97b03134bb408b8fbd013fd3468120' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='1374619' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.rpx0fJ0b/pbuilderrc_Ake2 --distribution forky --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/forky-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.rpx0fJ0b/b1 --logfile b1/build.log libslow5lib_0.7.0+dfsg-3.dsc' SUDO_GID='109' SUDO_HOME='/var/lib/jenkins' SUDO_UID='104' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://192.168.101.4:3128' I: uname -a Linux codethink03-arm64 6.12.48+deb13-cloud-arm64 #1 SMP Debian 6.12.48-1 (2025-09-20) aarch64 GNU/Linux I: ls -l /bin lrwxrwxrwx 1 root root 7 Aug 10 2025 /bin -> usr/bin I: user script /srv/workspace/pbuilder/1374619/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: arm64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: dpkg-dev (>= 1.22.5), debhelper-compat (= 13), cmake, d-shlibs (>= 0.106~), dh-python, python3-all-dev, libstreamvbyte-dev, libzstd-dev, zlib1g-dev, cython3, python3-setuptools, python3-numpy, python3-wheel dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 20020 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on cmake; however: Package cmake is not installed. pbuilder-satisfydepends-dummy depends on d-shlibs (>= 0.106~); however: Package d-shlibs is not installed. pbuilder-satisfydepends-dummy depends on dh-python; however: Package dh-python is not installed. pbuilder-satisfydepends-dummy depends on python3-all-dev; however: Package python3-all-dev is not installed. pbuilder-satisfydepends-dummy depends on libstreamvbyte-dev; however: Package libstreamvbyte-dev is not installed. pbuilder-satisfydepends-dummy depends on libzstd-dev; however: Package libzstd-dev is not installed. pbuilder-satisfydepends-dummy depends on zlib1g-dev; however: Package zlib1g-dev is not installed. pbuilder-satisfydepends-dummy depends on cython3; however: Package cython3 is not installed. pbuilder-satisfydepends-dummy depends on python3-setuptools; however: Package python3-setuptools is not installed. pbuilder-satisfydepends-dummy depends on python3-numpy; however: Package python3-numpy is not installed. pbuilder-satisfydepends-dummy depends on python3-wheel; however: Package python3-wheel is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} cmake{a} cmake-data{a} cython3{a} d-shlibs{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libarchive13t64{a} libblas3{a} libbrotli1{a} libcom-err2{a} libcurl4t64{a} libdebhelper-perl{a} libelf1t64{a} libexpat1{a} libexpat1-dev{a} libffi8{a} libfile-stripnondeterminism-perl{a} libgfortran5{a} libgnutls30t64{a} libgssapi-krb5-2{a} libidn2-0{a} libjs-sphinxdoc{a} libjsoncpp26{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} liblapack3{a} libldap2{a} libmagic-mgc{a} libmagic1t64{a} libnghttp2-14{a} libnghttp3-9{a} libp11-kit0{a} libpipeline1{a} libproc2-0{a} libpsl5t64{a} libpython3-all-dev{a} libpython3-dev{a} libpython3-stdlib{a} libpython3.13{a} libpython3.13-dev{a} libpython3.13-minimal{a} libpython3.13-stdlib{a} libreadline8t64{a} librhash1{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libssh2-1t64{a} libstreamvbyte-dev{a} libstreamvbyte0{a} libtasn1-6{a} libtool{a} libuchardet0{a} libunistring5{a} libuv1t64{a} libxml2-16{a} libzstd-dev{a} m4{a} man-db{a} media-types{a} netbase{a} po-debconf{a} procps{a} python3{a} python3-all{a} python3-all-dev{a} python3-autocommand{a} python3-dev{a} python3-inflect{a} python3-jaraco.context{a} python3-jaraco.functools{a} python3-jaraco.text{a} python3-minimal{a} python3-more-itertools{a} python3-numpy{a} python3-numpy-dev{a} python3-packaging{a} python3-pkg-resources{a} python3-setuptools{a} python3-typeguard{a} python3-typing-extensions{a} python3-wheel{a} python3-zipp{a} python3.13{a} python3.13-dev{a} python3.13-minimal{a} readline-common{a} sensible-utils{a} tzdata{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl krb5-locales libarchive-cpio-perl libldap-common libltdl-dev libmail-sendmail-perl libsasl2-modules linux-sysctl-defaults lynx psmisc publicsuffix wget 0 packages upgraded, 106 newly installed, 0 to remove and 0 not upgraded. Need to get 54.0 MB of archives. After unpacking 224 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian forky/main arm64 libexpat1 arm64 2.7.2-1 [95.7 kB] Get: 2 http://deb.debian.org/debian forky/main arm64 libpython3.13-minimal arm64 3.13.7-1 [857 kB] Get: 3 http://deb.debian.org/debian forky/main arm64 python3.13-minimal arm64 3.13.7-1 [2001 kB] Get: 4 http://deb.debian.org/debian forky/main arm64 python3-minimal arm64 3.13.7-1 [27.2 kB] Get: 5 http://deb.debian.org/debian forky/main arm64 media-types all 13.0.0 [29.3 kB] Get: 6 http://deb.debian.org/debian forky/main arm64 netbase all 6.5 [12.4 kB] Get: 7 http://deb.debian.org/debian forky/main arm64 tzdata all 2025b-5 [260 kB] Get: 8 http://deb.debian.org/debian forky/main arm64 libffi8 arm64 3.5.2-2 [21.5 kB] Get: 9 http://deb.debian.org/debian forky/main arm64 readline-common all 8.3-3 [74.8 kB] Get: 10 http://deb.debian.org/debian forky/main arm64 libreadline8t64 arm64 8.3-3 [169 kB] Get: 11 http://deb.debian.org/debian forky/main arm64 libpython3.13-stdlib arm64 3.13.7-1 [1895 kB] Get: 12 http://deb.debian.org/debian forky/main arm64 python3.13 arm64 3.13.7-1 [761 kB] Get: 13 http://deb.debian.org/debian forky/main arm64 libpython3-stdlib arm64 3.13.7-1 [10.2 kB] Get: 14 http://deb.debian.org/debian forky/main arm64 python3 arm64 3.13.7-1 [28.3 kB] Get: 15 http://deb.debian.org/debian forky/main arm64 python3-numpy-dev arm64 1:2.2.4+ds-1.2 [138 kB] Get: 16 http://deb.debian.org/debian forky/main arm64 libblas3 arm64 3.12.1-7 [135 kB] Get: 17 http://deb.debian.org/debian forky/main arm64 libgfortran5 arm64 15.2.0-4 [371 kB] Get: 18 http://deb.debian.org/debian forky/main arm64 liblapack3 arm64 3.12.1-7 [1846 kB] Get: 19 http://deb.debian.org/debian forky/main arm64 python3-numpy arm64 1:2.2.4+ds-1.2 [3620 kB] Get: 20 http://deb.debian.org/debian forky/main arm64 libproc2-0 arm64 2:4.0.4-9 [62.8 kB] Get: 21 http://deb.debian.org/debian forky/main arm64 procps arm64 2:4.0.4-9 [871 kB] Get: 22 http://deb.debian.org/debian forky/main arm64 sensible-utils all 0.0.26 [27.0 kB] Get: 23 http://deb.debian.org/debian forky/main arm64 libmagic-mgc arm64 1:5.46-5 [338 kB] Get: 24 http://deb.debian.org/debian forky/main arm64 libmagic1t64 arm64 1:5.46-5 [103 kB] Get: 25 http://deb.debian.org/debian forky/main arm64 file arm64 1:5.46-5 [43.7 kB] Get: 26 http://deb.debian.org/debian forky/main arm64 gettext-base arm64 0.23.1-2+b1 [241 kB] Get: 27 http://deb.debian.org/debian forky/main arm64 libuchardet0 arm64 0.0.8-2 [69.0 kB] Get: 28 http://deb.debian.org/debian forky/main arm64 groff-base arm64 1.23.0-9 [1130 kB] Get: 29 http://deb.debian.org/debian forky/main arm64 bsdextrautils arm64 2.41.1-3 [98.1 kB] Get: 30 http://deb.debian.org/debian forky/main arm64 libpipeline1 arm64 1.5.8-1 [40.2 kB] Get: 31 http://deb.debian.org/debian forky/main arm64 man-db arm64 2.13.1-1 [1453 kB] Get: 32 http://deb.debian.org/debian forky/main arm64 m4 arm64 1.4.20-1 [316 kB] Get: 33 http://deb.debian.org/debian forky/main arm64 autoconf all 2.72-3.1 [494 kB] Get: 34 http://deb.debian.org/debian forky/main arm64 autotools-dev all 20240727.1 [60.2 kB] Get: 35 http://deb.debian.org/debian forky/main arm64 automake all 1:1.17-4 [862 kB] Get: 36 http://deb.debian.org/debian forky/main arm64 autopoint all 0.23.1-2 [770 kB] Get: 37 http://deb.debian.org/debian forky/main arm64 cmake-data all 4.1.1+really3.31.6-2 [2268 kB] Get: 38 http://deb.debian.org/debian forky/main arm64 libxml2-16 arm64 2.14.5+dfsg-0.2 [582 kB] Get: 39 http://deb.debian.org/debian forky/main arm64 libarchive13t64 arm64 3.7.4-4+b1 [323 kB] Get: 40 http://deb.debian.org/debian forky/main arm64 libbrotli1 arm64 1.1.0-2+b7 [308 kB] Get: 41 http://deb.debian.org/debian forky/main arm64 libkrb5support0 arm64 1.21.3-5 [32.4 kB] Get: 42 http://deb.debian.org/debian forky/main arm64 libcom-err2 arm64 1.47.2-3+b3 [24.9 kB] Get: 43 http://deb.debian.org/debian forky/main arm64 libk5crypto3 arm64 1.21.3-5 [81.2 kB] Get: 44 http://deb.debian.org/debian forky/main arm64 libkeyutils1 arm64 1.6.3-6 [9716 B] Get: 45 http://deb.debian.org/debian forky/main arm64 libkrb5-3 arm64 1.21.3-5 [308 kB] Get: 46 http://deb.debian.org/debian forky/main arm64 libgssapi-krb5-2 arm64 1.21.3-5 [127 kB] Get: 47 http://deb.debian.org/debian forky/main arm64 libunistring5 arm64 1.3-2 [453 kB] Get: 48 http://deb.debian.org/debian forky/main arm64 libidn2-0 arm64 2.3.8-4 [108 kB] Get: 49 http://deb.debian.org/debian forky/main arm64 libsasl2-modules-db arm64 2.1.28+dfsg1-9 [20.1 kB] Get: 50 http://deb.debian.org/debian forky/main arm64 libsasl2-2 arm64 2.1.28+dfsg1-9 [55.6 kB] Get: 51 http://deb.debian.org/debian forky/main arm64 libldap2 arm64 2.6.10+dfsg-1 [179 kB] Get: 52 http://deb.debian.org/debian forky/main arm64 libnghttp2-14 arm64 1.64.0-1.1+b1 [71.7 kB] Get: 53 http://deb.debian.org/debian forky/main arm64 libnghttp3-9 arm64 1.11.0-1 [66.7 kB] Get: 54 http://deb.debian.org/debian forky/main arm64 libpsl5t64 arm64 0.21.2-1.1+b1 [57.1 kB] Get: 55 http://deb.debian.org/debian forky/main arm64 libp11-kit0 arm64 0.25.9-2 [420 kB] Get: 56 http://deb.debian.org/debian forky/main arm64 libtasn1-6 arm64 4.20.0-2 [47.3 kB] Get: 57 http://deb.debian.org/debian forky/main arm64 libgnutls30t64 arm64 3.8.9-3 [1375 kB] Get: 58 http://deb.debian.org/debian forky/main arm64 librtmp1 arm64 2.4+20151223.gitfa8646d.1-3 [56.3 kB] Get: 59 http://deb.debian.org/debian forky/main arm64 libssh2-1t64 arm64 1.11.1-1 [235 kB] Get: 60 http://deb.debian.org/debian forky/main arm64 libcurl4t64 arm64 8.16.0-1 [388 kB] Get: 61 http://deb.debian.org/debian forky/main arm64 libjsoncpp26 arm64 1.9.6-4 [73.2 kB] Get: 62 http://deb.debian.org/debian forky/main arm64 librhash1 arm64 1.4.6-1 [131 kB] Get: 63 http://deb.debian.org/debian forky/main arm64 libuv1t64 arm64 1.51.0-2 [150 kB] Get: 64 http://deb.debian.org/debian forky/main arm64 cmake arm64 4.1.1+really3.31.6-2 [10.1 MB] Get: 65 http://deb.debian.org/debian forky/main arm64 cython3 arm64 3.0.11+dfsg-2+b1 [2255 kB] Get: 66 http://deb.debian.org/debian forky/main arm64 d-shlibs all 0.109 [11.1 kB] Get: 67 http://deb.debian.org/debian forky/main arm64 libdebhelper-perl all 13.27 [92.2 kB] Get: 68 http://deb.debian.org/debian forky/main arm64 libtool all 2.5.4-5 [540 kB] Get: 69 http://deb.debian.org/debian forky/main arm64 dh-autoreconf all 21 [12.2 kB] Get: 70 http://deb.debian.org/debian forky/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 71 http://deb.debian.org/debian forky/main arm64 libfile-stripnondeterminism-perl all 1.15.0-1 [19.9 kB] Get: 72 http://deb.debian.org/debian forky/main arm64 dh-strip-nondeterminism all 1.15.0-1 [8812 B] Get: 73 http://deb.debian.org/debian forky/main arm64 libelf1t64 arm64 0.193-3 [189 kB] Get: 74 http://deb.debian.org/debian forky/main arm64 dwz arm64 0.16-2 [100 kB] Get: 75 http://deb.debian.org/debian forky/main arm64 gettext arm64 0.23.1-2+b1 [1612 kB] Get: 76 http://deb.debian.org/debian forky/main arm64 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 77 http://deb.debian.org/debian forky/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 78 http://deb.debian.org/debian forky/main arm64 debhelper all 13.27 [940 kB] Get: 79 http://deb.debian.org/debian forky/main arm64 dh-python all 6.20250414 [116 kB] Get: 80 http://deb.debian.org/debian forky/main arm64 libexpat1-dev arm64 2.7.2-1 [290 kB] Get: 81 http://deb.debian.org/debian forky/main arm64 libjs-sphinxdoc all 8.2.3-6 [27.5 kB] Get: 82 http://deb.debian.org/debian forky/main arm64 libpython3.13 arm64 3.13.7-1 [1978 kB] Get: 83 http://deb.debian.org/debian forky/main arm64 zlib1g-dev arm64 1:1.3.dfsg+really1.3.1-1+b1 [917 kB] Get: 84 http://deb.debian.org/debian forky/main arm64 libpython3.13-dev arm64 3.13.7-1 [4924 kB] Get: 85 http://deb.debian.org/debian forky/main arm64 libpython3-dev arm64 3.13.7-1 [10.5 kB] Get: 86 http://deb.debian.org/debian forky/main arm64 libpython3-all-dev arm64 3.13.7-1 [1068 B] Get: 87 http://deb.debian.org/debian forky/main arm64 libstreamvbyte0 arm64 0.4.1-4+b1 [6028 B] Get: 88 http://deb.debian.org/debian forky/main arm64 libstreamvbyte-dev arm64 0.4.1-4+b1 [6744 B] Get: 89 http://deb.debian.org/debian forky/main arm64 libzstd-dev arm64 1.5.7+dfsg-1.1 [335 kB] Get: 90 http://deb.debian.org/debian forky/main arm64 python3-all arm64 3.13.7-1 [1044 B] Get: 91 http://deb.debian.org/debian forky/main arm64 python3.13-dev arm64 3.13.7-1 [504 kB] Get: 92 http://deb.debian.org/debian forky/main arm64 python3-dev arm64 3.13.7-1 [26.1 kB] Get: 93 http://deb.debian.org/debian forky/main arm64 python3-all-dev arm64 3.13.7-1 [1068 B] Get: 94 http://deb.debian.org/debian forky/main arm64 python3-autocommand all 2.2.2-3 [13.6 kB] Get: 95 http://deb.debian.org/debian forky/main arm64 python3-more-itertools all 10.8.0-1 [71.7 kB] Get: 96 http://deb.debian.org/debian forky/main arm64 python3-typing-extensions all 4.15.0-1 [92.4 kB] Get: 97 http://deb.debian.org/debian forky/main arm64 python3-typeguard all 4.4.4-1 [37.1 kB] Get: 98 http://deb.debian.org/debian forky/main arm64 python3-inflect all 7.5.0-1 [33.0 kB] Get: 99 http://deb.debian.org/debian forky/main arm64 python3-jaraco.functools all 4.1.0-1 [12.0 kB] Get: 100 http://deb.debian.org/debian forky/main arm64 python3-pkg-resources all 78.1.1-0.1 [224 kB] Get: 101 http://deb.debian.org/debian forky/main arm64 python3-jaraco.text all 4.0.0-1 [11.4 kB] Get: 102 http://deb.debian.org/debian forky/main arm64 python3-zipp all 3.23.0-1 [11.0 kB] Get: 103 http://deb.debian.org/debian forky/main arm64 python3-setuptools all 78.1.1-0.1 [738 kB] Get: 104 http://deb.debian.org/debian forky/main arm64 python3-jaraco.context all 6.0.1-1 [8276 B] Get: 105 http://deb.debian.org/debian forky/main arm64 python3-packaging all 25.0-1 [56.6 kB] Get: 106 http://deb.debian.org/debian forky/main arm64 python3-wheel all 0.46.1-2 [21.7 kB] Fetched 54.0 MB in 0s (184 MB/s) Preconfiguring packages ... Selecting previously unselected package libexpat1:arm64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20020 files and directories currently installed.) Preparing to unpack .../libexpat1_2.7.2-1_arm64.deb ... Unpacking libexpat1:arm64 (2.7.2-1) ... Selecting previously unselected package libpython3.13-minimal:arm64. Preparing to unpack .../libpython3.13-minimal_3.13.7-1_arm64.deb ... Unpacking libpython3.13-minimal:arm64 (3.13.7-1) ... Selecting previously unselected package python3.13-minimal. Preparing to unpack .../python3.13-minimal_3.13.7-1_arm64.deb ... Unpacking python3.13-minimal (3.13.7-1) ... Setting up libpython3.13-minimal:arm64 (3.13.7-1) ... Setting up libexpat1:arm64 (2.7.2-1) ... Setting up python3.13-minimal (3.13.7-1) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20354 files and directories currently installed.) Preparing to unpack .../0-python3-minimal_3.13.7-1_arm64.deb ... Unpacking python3-minimal (3.13.7-1) ... Selecting previously unselected package media-types. Preparing to unpack .../1-media-types_13.0.0_all.deb ... Unpacking media-types (13.0.0) ... Selecting previously unselected package netbase. Preparing to unpack .../2-netbase_6.5_all.deb ... Unpacking netbase (6.5) ... Selecting previously unselected package tzdata. Preparing to unpack .../3-tzdata_2025b-5_all.deb ... Unpacking tzdata (2025b-5) ... Selecting previously unselected package libffi8:arm64. Preparing to unpack .../4-libffi8_3.5.2-2_arm64.deb ... Unpacking libffi8:arm64 (3.5.2-2) ... Selecting previously unselected package readline-common. Preparing to unpack .../5-readline-common_8.3-3_all.deb ... Unpacking readline-common (8.3-3) ... Selecting previously unselected package libreadline8t64:arm64. Preparing to unpack .../6-libreadline8t64_8.3-3_arm64.deb ... Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8 to /lib/aarch64-linux-gnu/libhistory.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/aarch64-linux-gnu/libhistory.so.8.2 to /lib/aarch64-linux-gnu/libhistory.so.8.2.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8 to /lib/aarch64-linux-gnu/libreadline.so.8.usr-is-merged by libreadline8t64' Adding 'diversion of /lib/aarch64-linux-gnu/libreadline.so.8.2 to /lib/aarch64-linux-gnu/libreadline.so.8.2.usr-is-merged by libreadline8t64' Unpacking libreadline8t64:arm64 (8.3-3) ... Selecting previously unselected package libpython3.13-stdlib:arm64. Preparing to unpack .../7-libpython3.13-stdlib_3.13.7-1_arm64.deb ... Unpacking libpython3.13-stdlib:arm64 (3.13.7-1) ... Selecting previously unselected package python3.13. Preparing to unpack .../8-python3.13_3.13.7-1_arm64.deb ... Unpacking python3.13 (3.13.7-1) ... Selecting previously unselected package libpython3-stdlib:arm64. Preparing to unpack .../9-libpython3-stdlib_3.13.7-1_arm64.deb ... Unpacking libpython3-stdlib:arm64 (3.13.7-1) ... Setting up python3-minimal (3.13.7-1) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 21369 files and directories currently installed.) Preparing to unpack .../00-python3_3.13.7-1_arm64.deb ... Unpacking python3 (3.13.7-1) ... Selecting previously unselected package python3-numpy-dev:arm64. Preparing to unpack .../01-python3-numpy-dev_1%3a2.2.4+ds-1.2_arm64.deb ... Unpacking python3-numpy-dev:arm64 (1:2.2.4+ds-1.2) ... Selecting previously unselected package libblas3:arm64. Preparing to unpack .../02-libblas3_3.12.1-7_arm64.deb ... Unpacking libblas3:arm64 (3.12.1-7) ... Selecting previously unselected package libgfortran5:arm64. Preparing to unpack .../03-libgfortran5_15.2.0-4_arm64.deb ... Unpacking libgfortran5:arm64 (15.2.0-4) ... Selecting previously unselected package liblapack3:arm64. Preparing to unpack .../04-liblapack3_3.12.1-7_arm64.deb ... Unpacking liblapack3:arm64 (3.12.1-7) ... Selecting previously unselected package python3-numpy. Preparing to unpack .../05-python3-numpy_1%3a2.2.4+ds-1.2_arm64.deb ... Unpacking python3-numpy (1:2.2.4+ds-1.2) ... Selecting previously unselected package libproc2-0:arm64. Preparing to unpack .../06-libproc2-0_2%3a4.0.4-9_arm64.deb ... Unpacking libproc2-0:arm64 (2:4.0.4-9) ... Selecting previously unselected package procps. Preparing to unpack .../07-procps_2%3a4.0.4-9_arm64.deb ... Unpacking procps (2:4.0.4-9) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../08-sensible-utils_0.0.26_all.deb ... Unpacking sensible-utils (0.0.26) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../09-libmagic-mgc_1%3a5.46-5_arm64.deb ... Unpacking libmagic-mgc (1:5.46-5) ... Selecting previously unselected package libmagic1t64:arm64. Preparing to unpack .../10-libmagic1t64_1%3a5.46-5_arm64.deb ... Unpacking libmagic1t64:arm64 (1:5.46-5) ... Selecting previously unselected package file. Preparing to unpack .../11-file_1%3a5.46-5_arm64.deb ... Unpacking file (1:5.46-5) ... Selecting previously unselected package gettext-base. Preparing to unpack .../12-gettext-base_0.23.1-2+b1_arm64.deb ... Unpacking gettext-base (0.23.1-2+b1) ... Selecting previously unselected package libuchardet0:arm64. Preparing to unpack .../13-libuchardet0_0.0.8-2_arm64.deb ... Unpacking libuchardet0:arm64 (0.0.8-2) ... Selecting previously unselected package groff-base. Preparing to unpack .../14-groff-base_1.23.0-9_arm64.deb ... Unpacking groff-base (1.23.0-9) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../15-bsdextrautils_2.41.1-3_arm64.deb ... Unpacking bsdextrautils (2.41.1-3) ... Selecting previously unselected package libpipeline1:arm64. Preparing to unpack .../16-libpipeline1_1.5.8-1_arm64.deb ... Unpacking libpipeline1:arm64 (1.5.8-1) ... Selecting previously unselected package man-db. Preparing to unpack .../17-man-db_2.13.1-1_arm64.deb ... Unpacking man-db (2.13.1-1) ... Selecting previously unselected package m4. Preparing to unpack .../18-m4_1.4.20-1_arm64.deb ... Unpacking m4 (1.4.20-1) ... Selecting previously unselected package autoconf. Preparing to unpack .../19-autoconf_2.72-3.1_all.deb ... Unpacking autoconf (2.72-3.1) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../20-autotools-dev_20240727.1_all.deb ... Unpacking autotools-dev (20240727.1) ... Selecting previously unselected package automake. Preparing to unpack .../21-automake_1%3a1.17-4_all.deb ... Unpacking automake (1:1.17-4) ... Selecting previously unselected package autopoint. Preparing to unpack .../22-autopoint_0.23.1-2_all.deb ... Unpacking autopoint (0.23.1-2) ... Selecting previously unselected package cmake-data. Preparing to unpack .../23-cmake-data_4.1.1+really3.31.6-2_all.deb ... Unpacking cmake-data (4.1.1+really3.31.6-2) ... Selecting previously unselected package libxml2-16:arm64. Preparing to unpack .../24-libxml2-16_2.14.5+dfsg-0.2_arm64.deb ... Unpacking libxml2-16:arm64 (2.14.5+dfsg-0.2) ... Selecting previously unselected package libarchive13t64:arm64. Preparing to unpack .../25-libarchive13t64_3.7.4-4+b1_arm64.deb ... Unpacking libarchive13t64:arm64 (3.7.4-4+b1) ... Selecting previously unselected package libbrotli1:arm64. Preparing to unpack .../26-libbrotli1_1.1.0-2+b7_arm64.deb ... Unpacking libbrotli1:arm64 (1.1.0-2+b7) ... Selecting previously unselected package libkrb5support0:arm64. Preparing to unpack .../27-libkrb5support0_1.21.3-5_arm64.deb ... Unpacking libkrb5support0:arm64 (1.21.3-5) ... Selecting previously unselected package libcom-err2:arm64. Preparing to unpack .../28-libcom-err2_1.47.2-3+b3_arm64.deb ... Unpacking libcom-err2:arm64 (1.47.2-3+b3) ... Selecting previously unselected package libk5crypto3:arm64. Preparing to unpack .../29-libk5crypto3_1.21.3-5_arm64.deb ... Unpacking libk5crypto3:arm64 (1.21.3-5) ... Selecting previously unselected package libkeyutils1:arm64. Preparing to unpack .../30-libkeyutils1_1.6.3-6_arm64.deb ... Unpacking libkeyutils1:arm64 (1.6.3-6) ... Selecting previously unselected package libkrb5-3:arm64. Preparing to unpack .../31-libkrb5-3_1.21.3-5_arm64.deb ... Unpacking libkrb5-3:arm64 (1.21.3-5) ... Selecting previously unselected package libgssapi-krb5-2:arm64. Preparing to unpack .../32-libgssapi-krb5-2_1.21.3-5_arm64.deb ... Unpacking libgssapi-krb5-2:arm64 (1.21.3-5) ... Selecting previously unselected package libunistring5:arm64. Preparing to unpack .../33-libunistring5_1.3-2_arm64.deb ... Unpacking libunistring5:arm64 (1.3-2) ... Selecting previously unselected package libidn2-0:arm64. Preparing to unpack .../34-libidn2-0_2.3.8-4_arm64.deb ... Unpacking libidn2-0:arm64 (2.3.8-4) ... Selecting previously unselected package libsasl2-modules-db:arm64. Preparing to unpack .../35-libsasl2-modules-db_2.1.28+dfsg1-9_arm64.deb ... Unpacking libsasl2-modules-db:arm64 (2.1.28+dfsg1-9) ... Selecting previously unselected package libsasl2-2:arm64. Preparing to unpack .../36-libsasl2-2_2.1.28+dfsg1-9_arm64.deb ... Unpacking libsasl2-2:arm64 (2.1.28+dfsg1-9) ... Selecting previously unselected package libldap2:arm64. Preparing to unpack .../37-libldap2_2.6.10+dfsg-1_arm64.deb ... Unpacking libldap2:arm64 (2.6.10+dfsg-1) ... Selecting previously unselected package libnghttp2-14:arm64. Preparing to unpack .../38-libnghttp2-14_1.64.0-1.1+b1_arm64.deb ... Unpacking libnghttp2-14:arm64 (1.64.0-1.1+b1) ... Selecting previously unselected package libnghttp3-9:arm64. Preparing to unpack .../39-libnghttp3-9_1.11.0-1_arm64.deb ... Unpacking libnghttp3-9:arm64 (1.11.0-1) ... Selecting previously unselected package libpsl5t64:arm64. Preparing to unpack .../40-libpsl5t64_0.21.2-1.1+b1_arm64.deb ... Unpacking libpsl5t64:arm64 (0.21.2-1.1+b1) ... Selecting previously unselected package libp11-kit0:arm64. Preparing to unpack .../41-libp11-kit0_0.25.9-2_arm64.deb ... Unpacking libp11-kit0:arm64 (0.25.9-2) ... Selecting previously unselected package libtasn1-6:arm64. Preparing to unpack .../42-libtasn1-6_4.20.0-2_arm64.deb ... Unpacking libtasn1-6:arm64 (4.20.0-2) ... Selecting previously unselected package libgnutls30t64:arm64. Preparing to unpack .../43-libgnutls30t64_3.8.9-3_arm64.deb ... Unpacking libgnutls30t64:arm64 (3.8.9-3) ... Selecting previously unselected package librtmp1:arm64. Preparing to unpack .../44-librtmp1_2.4+20151223.gitfa8646d.1-3_arm64.deb ... Unpacking librtmp1:arm64 (2.4+20151223.gitfa8646d.1-3) ... Selecting previously unselected package libssh2-1t64:arm64. Preparing to unpack .../45-libssh2-1t64_1.11.1-1_arm64.deb ... Unpacking libssh2-1t64:arm64 (1.11.1-1) ... Selecting previously unselected package libcurl4t64:arm64. Preparing to unpack .../46-libcurl4t64_8.16.0-1_arm64.deb ... Unpacking libcurl4t64:arm64 (8.16.0-1) ... Selecting previously unselected package libjsoncpp26:arm64. Preparing to unpack .../47-libjsoncpp26_1.9.6-4_arm64.deb ... Unpacking libjsoncpp26:arm64 (1.9.6-4) ... Selecting previously unselected package librhash1:arm64. Preparing to unpack .../48-librhash1_1.4.6-1_arm64.deb ... Unpacking librhash1:arm64 (1.4.6-1) ... Selecting previously unselected package libuv1t64:arm64. Preparing to unpack .../49-libuv1t64_1.51.0-2_arm64.deb ... Unpacking libuv1t64:arm64 (1.51.0-2) ... Selecting previously unselected package cmake. Preparing to unpack .../50-cmake_4.1.1+really3.31.6-2_arm64.deb ... Unpacking cmake (4.1.1+really3.31.6-2) ... Selecting previously unselected package cython3. Preparing to unpack .../51-cython3_3.0.11+dfsg-2+b1_arm64.deb ... Unpacking cython3 (3.0.11+dfsg-2+b1) ... Selecting previously unselected package d-shlibs. Preparing to unpack .../52-d-shlibs_0.109_all.deb ... Unpacking d-shlibs (0.109) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../53-libdebhelper-perl_13.27_all.deb ... Unpacking libdebhelper-perl (13.27) ... Selecting previously unselected package libtool. Preparing to unpack .../54-libtool_2.5.4-5_all.deb ... Unpacking libtool (2.5.4-5) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../55-dh-autoreconf_21_all.deb ... Unpacking dh-autoreconf (21) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../56-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../57-libfile-stripnondeterminism-perl_1.15.0-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.15.0-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../58-dh-strip-nondeterminism_1.15.0-1_all.deb ... Unpacking dh-strip-nondeterminism (1.15.0-1) ... Selecting previously unselected package libelf1t64:arm64. Preparing to unpack .../59-libelf1t64_0.193-3_arm64.deb ... Unpacking libelf1t64:arm64 (0.193-3) ... Selecting previously unselected package dwz. Preparing to unpack .../60-dwz_0.16-2_arm64.deb ... Unpacking dwz (0.16-2) ... Selecting previously unselected package gettext. Preparing to unpack .../61-gettext_0.23.1-2+b1_arm64.deb ... Unpacking gettext (0.23.1-2+b1) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../62-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../63-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../64-debhelper_13.27_all.deb ... Unpacking debhelper (13.27) ... Selecting previously unselected package dh-python. Preparing to unpack .../65-dh-python_6.20250414_all.deb ... Unpacking dh-python (6.20250414) ... Selecting previously unselected package libexpat1-dev:arm64. Preparing to unpack .../66-libexpat1-dev_2.7.2-1_arm64.deb ... Unpacking libexpat1-dev:arm64 (2.7.2-1) ... Selecting previously unselected package libjs-sphinxdoc. Preparing to unpack .../67-libjs-sphinxdoc_8.2.3-6_all.deb ... Unpacking libjs-sphinxdoc (8.2.3-6) ... Selecting previously unselected package libpython3.13:arm64. Preparing to unpack .../68-libpython3.13_3.13.7-1_arm64.deb ... Unpacking libpython3.13:arm64 (3.13.7-1) ... Selecting previously unselected package zlib1g-dev:arm64. Preparing to unpack .../69-zlib1g-dev_1%3a1.3.dfsg+really1.3.1-1+b1_arm64.deb ... Unpacking zlib1g-dev:arm64 (1:1.3.dfsg+really1.3.1-1+b1) ... Selecting previously unselected package libpython3.13-dev:arm64. Preparing to unpack .../70-libpython3.13-dev_3.13.7-1_arm64.deb ... Unpacking libpython3.13-dev:arm64 (3.13.7-1) ... Selecting previously unselected package libpython3-dev:arm64. Preparing to unpack .../71-libpython3-dev_3.13.7-1_arm64.deb ... Unpacking libpython3-dev:arm64 (3.13.7-1) ... Selecting previously unselected package libpython3-all-dev:arm64. Preparing to unpack .../72-libpython3-all-dev_3.13.7-1_arm64.deb ... Unpacking libpython3-all-dev:arm64 (3.13.7-1) ... Selecting previously unselected package libstreamvbyte0:arm64. Preparing to unpack .../73-libstreamvbyte0_0.4.1-4+b1_arm64.deb ... Unpacking libstreamvbyte0:arm64 (0.4.1-4+b1) ... Selecting previously unselected package libstreamvbyte-dev:arm64. Preparing to unpack .../74-libstreamvbyte-dev_0.4.1-4+b1_arm64.deb ... Unpacking libstreamvbyte-dev:arm64 (0.4.1-4+b1) ... Selecting previously unselected package libzstd-dev:arm64. Preparing to unpack .../75-libzstd-dev_1.5.7+dfsg-1.1_arm64.deb ... Unpacking libzstd-dev:arm64 (1.5.7+dfsg-1.1) ... Selecting previously unselected package python3-all. Preparing to unpack .../76-python3-all_3.13.7-1_arm64.deb ... Unpacking python3-all (3.13.7-1) ... Selecting previously unselected package python3.13-dev. Preparing to unpack .../77-python3.13-dev_3.13.7-1_arm64.deb ... Unpacking python3.13-dev (3.13.7-1) ... Selecting previously unselected package python3-dev. Preparing to unpack .../78-python3-dev_3.13.7-1_arm64.deb ... Unpacking python3-dev (3.13.7-1) ... Selecting previously unselected package python3-all-dev. Preparing to unpack .../79-python3-all-dev_3.13.7-1_arm64.deb ... Unpacking python3-all-dev (3.13.7-1) ... Selecting previously unselected package python3-autocommand. Preparing to unpack .../80-python3-autocommand_2.2.2-3_all.deb ... Unpacking python3-autocommand (2.2.2-3) ... Selecting previously unselected package python3-more-itertools. Preparing to unpack .../81-python3-more-itertools_10.8.0-1_all.deb ... Unpacking python3-more-itertools (10.8.0-1) ... Selecting previously unselected package python3-typing-extensions. Preparing to unpack .../82-python3-typing-extensions_4.15.0-1_all.deb ... Unpacking python3-typing-extensions (4.15.0-1) ... Selecting previously unselected package python3-typeguard. Preparing to unpack .../83-python3-typeguard_4.4.4-1_all.deb ... Unpacking python3-typeguard (4.4.4-1) ... Selecting previously unselected package python3-inflect. Preparing to unpack .../84-python3-inflect_7.5.0-1_all.deb ... Unpacking python3-inflect (7.5.0-1) ... Selecting previously unselected package python3-jaraco.functools. Preparing to unpack .../85-python3-jaraco.functools_4.1.0-1_all.deb ... Unpacking python3-jaraco.functools (4.1.0-1) ... Selecting previously unselected package python3-pkg-resources. Preparing to unpack .../86-python3-pkg-resources_78.1.1-0.1_all.deb ... Unpacking python3-pkg-resources (78.1.1-0.1) ... Selecting previously unselected package python3-jaraco.text. Preparing to unpack .../87-python3-jaraco.text_4.0.0-1_all.deb ... Unpacking python3-jaraco.text (4.0.0-1) ... Selecting previously unselected package python3-zipp. Preparing to unpack .../88-python3-zipp_3.23.0-1_all.deb ... Unpacking python3-zipp (3.23.0-1) ... Selecting previously unselected package python3-setuptools. Preparing to unpack .../89-python3-setuptools_78.1.1-0.1_all.deb ... Unpacking python3-setuptools (78.1.1-0.1) ... Selecting previously unselected package python3-jaraco.context. Preparing to unpack .../90-python3-jaraco.context_6.0.1-1_all.deb ... Unpacking python3-jaraco.context (6.0.1-1) ... Selecting previously unselected package python3-packaging. Preparing to unpack .../91-python3-packaging_25.0-1_all.deb ... Unpacking python3-packaging (25.0-1) ... Selecting previously unselected package python3-wheel. Preparing to unpack .../92-python3-wheel_0.46.1-2_all.deb ... Unpacking python3-wheel (0.46.1-2) ... Setting up media-types (13.0.0) ... Setting up libpipeline1:arm64 (1.5.8-1) ... Setting up libstreamvbyte0:arm64 (0.4.1-4+b1) ... Setting up libkeyutils1:arm64 (1.6.3-6) ... Setting up libzstd-dev:arm64 (1.5.7+dfsg-1.1) ... Setting up bsdextrautils (2.41.1-3) ... Setting up libmagic-mgc (1:5.46-5) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libxml2-16:arm64 (2.14.5+dfsg-0.2) ... Setting up libdebhelper-perl (13.27) ... Setting up libbrotli1:arm64 (1.1.0-2+b7) ... Setting up libuv1t64:arm64 (1.51.0-2) ... Setting up libmagic1t64:arm64 (1:5.46-5) ... Setting up libnghttp2-14:arm64 (1.64.0-1.1+b1) ... Setting up gettext-base (0.23.1-2+b1) ... Setting up m4 (1.4.20-1) ... Setting up libcom-err2:arm64 (1.47.2-3+b3) ... Setting up file (1:5.46-5) ... Setting up libelf1t64:arm64 (0.193-3) ... Setting up libkrb5support0:arm64 (1.21.3-5) ... Setting up libsasl2-modules-db:arm64 (2.1.28+dfsg1-9) ... Setting up tzdata (2025b-5) ... Current default time zone: 'Etc/UTC' Local time is now: Thu Oct 29 19:09:06 UTC 2026. Universal Time is now: Thu Oct 29 19:09:06 UTC 2026. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up autotools-dev (20240727.1) ... Setting up libblas3:arm64 (3.12.1-7) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode Setting up libexpat1-dev:arm64 (2.7.2-1) ... Setting up libjsoncpp26:arm64 (1.9.6-4) ... Setting up libstreamvbyte-dev:arm64 (0.4.1-4+b1) ... Setting up libproc2-0:arm64 (2:4.0.4-9) ... Setting up libunistring5:arm64 (1.3-2) ... Setting up python3-numpy-dev:arm64 (1:2.2.4+ds-1.2) ... Setting up autopoint (0.23.1-2) ... Setting up d-shlibs (0.109) ... Setting up libk5crypto3:arm64 (1.21.3-5) ... Setting up libjs-sphinxdoc (8.2.3-6) ... Setting up libsasl2-2:arm64 (2.1.28+dfsg1-9) ... Setting up libgfortran5:arm64 (15.2.0-4) ... Setting up autoconf (2.72-3.1) ... Setting up libnghttp3-9:arm64 (1.11.0-1) ... Setting up zlib1g-dev:arm64 (1:1.3.dfsg+really1.3.1-1+b1) ... Setting up libffi8:arm64 (3.5.2-2) ... Setting up dwz (0.16-2) ... Setting up sensible-utils (0.0.26) ... Setting up libuchardet0:arm64 (0.0.8-2) ... Setting up procps (2:4.0.4-9) ... Setting up libtasn1-6:arm64 (4.20.0-2) ... Setting up netbase (6.5) ... Setting up cmake-data (4.1.1+really3.31.6-2) ... Setting up librhash1:arm64 (1.4.6-1) ... Setting up libkrb5-3:arm64 (1.21.3-5) ... Setting up libssh2-1t64:arm64 (1.11.1-1) ... Setting up libarchive13t64:arm64 (3.7.4-4+b1) ... Setting up readline-common (8.3-3) ... Setting up libldap2:arm64 (2.6.10+dfsg-1) ... Setting up automake (1:1.17-4) ... update-alternatives: using /usr/bin/automake-1.17 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.15.0-1) ... Setting up liblapack3:arm64 (3.12.1-7) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode Setting up gettext (0.23.1-2+b1) ... Setting up libtool (2.5.4-5) ... Setting up libidn2-0:arm64 (2.3.8-4) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (21) ... Setting up libp11-kit0:arm64 (0.25.9-2) ... Setting up libgssapi-krb5-2:arm64 (1.21.3-5) ... Setting up libreadline8t64:arm64 (8.3-3) ... Setting up dh-strip-nondeterminism (1.15.0-1) ... Setting up groff-base (1.23.0-9) ... Setting up libpython3.13-stdlib:arm64 (3.13.7-1) ... Setting up libpython3-stdlib:arm64 (3.13.7-1) ... Setting up libpython3.13:arm64 (3.13.7-1) ... Setting up libgnutls30t64:arm64 (3.8.9-3) ... Setting up python3.13 (3.13.7-1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libpsl5t64:arm64 (0.21.2-1.1+b1) ... Setting up python3 (3.13.7-1) ... Setting up python3-zipp (3.23.0-1) ... Setting up python3-autocommand (2.2.2-3) ... Setting up man-db (2.13.1-1) ... Not building database; man-db/auto-update is not 'true'. Setting up python3-packaging (25.0-1) ... Setting up librtmp1:arm64 (2.4+20151223.gitfa8646d.1-3) ... Setting up libpython3.13-dev:arm64 (3.13.7-1) ... Setting up cython3 (3.0.11+dfsg-2+b1) ... Setting up python3-typing-extensions (4.15.0-1) ... Setting up python3-numpy (1:2.2.4+ds-1.2) ... Setting up dh-python (6.20250414) ... Setting up python3-more-itertools (10.8.0-1) ... Setting up libpython3-dev:arm64 (3.13.7-1) ... Setting up python3-jaraco.functools (4.1.0-1) ... Setting up python3-jaraco.context (6.0.1-1) ... Setting up libcurl4t64:arm64 (8.16.0-1) ... Setting up python3.13-dev (3.13.7-1) ... Setting up python3-typeguard (4.4.4-1) ... Setting up python3-all (3.13.7-1) ... Setting up debhelper (13.27) ... Setting up python3-wheel (0.46.1-2) ... Setting up python3-inflect (7.5.0-1) ... Setting up libpython3-all-dev:arm64 (3.13.7-1) ... Setting up python3-jaraco.text (4.0.0-1) ... Setting up python3-dev (3.13.7-1) ... Setting up cmake (4.1.1+really3.31.6-2) ... Setting up python3-pkg-resources (78.1.1-0.1) ... Setting up python3-all-dev (3.13.7-1) ... Setting up python3-setuptools (78.1.1-0.1) ... Processing triggers for libc-bin (2.41-12) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/libslow5lib-0.7.0+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../libslow5lib_0.7.0+dfsg-3_source.changes dpkg-buildpackage: info: source package libslow5lib dpkg-buildpackage: info: source version 0.7.0+dfsg-3 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Étienne Mollier dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 debian/rules clean dh clean --with python3 --buildsystem=cmake dh_auto_clean -O--buildsystem=cmake dh_autoreconf_clean -O--buildsystem=cmake dh_clean -O--buildsystem=cmake debian/rules binary dh binary --with python3 --buildsystem=cmake dh_update_autotools_config -O--buildsystem=cmake dh_autoreconf -O--buildsystem=cmake debian/rules override_dh_auto_configure make[1]: Entering directory '/build/reproducible-path/libslow5lib-0.7.0+dfsg' dh_auto_configure -- \ -DSLOW5_USE_ZSTD="ON" cd obj-aarch64-linux-gnu && DEB_PYTHON_INSTALL_LAYOUT=deb PKG_CONFIG=/usr/bin/pkg-config cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/aarch64-linux-gnu -DSLOW5_USE_ZSTD=ON .. CMake Deprecation Warning at CMakeLists.txt:1 (cmake_minimum_required): Compatibility with CMake < 3.10 will be removed from a future version of CMake. Update the VERSION argument value. Or, use the ... syntax to tell CMake that the project requires at least but has been updated to work with policies introduced by or earlier. -- The C compiler identification is GNU 15.2.0 -- The CXX compiler identification is GNU 15.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Configuring done (0.7s) -- Generating done (0.0s) CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY CMAKE_FIND_USE_PACKAGE_REGISTRY CMAKE_INSTALL_LOCALSTATEDIR CMAKE_INSTALL_RUNSTATEDIR CMAKE_INSTALL_SYSCONFDIR FETCHCONTENT_FULLY_DISCONNECTED -- Build files have been written to: /build/reproducible-path/libslow5lib-0.7.0+dfsg/obj-aarch64-linux-gnu dh_auto_configure --buildsystem=pybuild I: pybuild base:311: dh_auto_configure --buildsystem=cmake --builddirectory=/build/reproducible-path/libslow5lib-0.7.0+dfsg/.pybuild/cpython3_3.13_slow5/build -- -DPYTHON_EXECUTABLE:FILEPATH=/usr/bin/python3.13 -DPYTHON_LIBRARY:FILEPATH=/usr/lib/python3.13/config-3.13-aarch64-linux-gnu/libpython3.13.so -DPYTHON_INCLUDE_DIR:PATH=/usr/include/python3.13 -DPython_EXECUTABLE=/usr/bin/python3.13 -DPython_LIBRARY=/usr/lib/python3.13/config-3.13-aarch64-linux-gnu/libpython3.13.so -DPython_INCLUDE_DIR=/usr/include/python3.13 -DPython3_EXECUTABLE=/usr/bin/python3.13 -DPython3_LIBRARY=/usr/lib/python3.13/config-3.13-aarch64-linux-gnu/libpython3.13.so -DPython3_INCLUDE_DIR=/usr/include/python3.13 cd .pybuild/cpython3_3.13_slow5/build && PKG_CONFIG=/usr/bin/pkg-config cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/aarch64-linux-gnu -DPYTHON_EXECUTABLE:FILEPATH=/usr/bin/python3.13 -DPYTHON_LIBRARY:FILEPATH=/usr/lib/python3.13/config-3.13-aarch64-linux-gnu/libpython3.13.so -DPYTHON_INCLUDE_DIR:PATH=/usr/include/python3.13 -DPython_EXECUTABLE=/usr/bin/python3.13 -DPython_LIBRARY=/usr/lib/python3.13/config-3.13-aarch64-linux-gnu/libpython3.13.so -DPython_INCLUDE_DIR=/usr/include/python3.13 -DPython3_EXECUTABLE=/usr/bin/python3.13 -DPython3_LIBRARY=/usr/lib/python3.13/config-3.13-aarch64-linux-gnu/libpython3.13.so -DPython3_INCLUDE_DIR=/usr/include/python3.13 ../../.. CMake Deprecation Warning at CMakeLists.txt:1 (cmake_minimum_required): Compatibility with CMake < 3.10 will be removed from a future version of CMake. Update the VERSION argument value. Or, use the ... syntax to tell CMake that the project requires at least but has been updated to work with policies introduced by or earlier. -- The C compiler identification is GNU 15.2.0 -- The CXX compiler identification is GNU 15.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Configuring done (0.5s) -- Generating done (0.0s) CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY CMAKE_FIND_USE_PACKAGE_REGISTRY CMAKE_INSTALL_LOCALSTATEDIR CMAKE_INSTALL_RUNSTATEDIR CMAKE_INSTALL_SYSCONFDIR FETCHCONTENT_FULLY_DISCONNECTED PYTHON_EXECUTABLE PYTHON_INCLUDE_DIR PYTHON_LIBRARY Python3_EXECUTABLE Python3_INCLUDE_DIR Python3_LIBRARY Python_EXECUTABLE Python_INCLUDE_DIR Python_LIBRARY -- Build files have been written to: /build/reproducible-path/libslow5lib-0.7.0+dfsg/.pybuild/cpython3_3.13_slow5/build make[1]: Leaving directory '/build/reproducible-path/libslow5lib-0.7.0+dfsg' debian/rules override_dh_auto_build make[1]: Entering directory '/build/reproducible-path/libslow5lib-0.7.0+dfsg' dh_auto_build cd obj-aarch64-linux-gnu && make -j12 INSTALL="install --strip-program=true" VERBOSE=1 make[2]: Entering directory '/build/reproducible-path/libslow5lib-0.7.0+dfsg/obj-aarch64-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/libslow5lib-0.7.0+dfsg -B/build/reproducible-path/libslow5lib-0.7.0+dfsg/obj-aarch64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/libslow5lib-0.7.0+dfsg/obj-aarch64-linux-gnu/CMakeFiles /build/reproducible-path/libslow5lib-0.7.0+dfsg/obj-aarch64-linux-gnu//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[3]: Entering directory '/build/reproducible-path/libslow5lib-0.7.0+dfsg/obj-aarch64-linux-gnu' make -f CMakeFiles/slow5_static.dir/build.make CMakeFiles/slow5_static.dir/depend make -f CMakeFiles/slow5.dir/build.make CMakeFiles/slow5.dir/depend make[4]: Entering directory '/build/reproducible-path/libslow5lib-0.7.0+dfsg/obj-aarch64-linux-gnu' cd /build/reproducible-path/libslow5lib-0.7.0+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libslow5lib-0.7.0+dfsg /build/reproducible-path/libslow5lib-0.7.0+dfsg /build/reproducible-path/libslow5lib-0.7.0+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/libslow5lib-0.7.0+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/libslow5lib-0.7.0+dfsg/obj-aarch64-linux-gnu/CMakeFiles/slow5_static.dir/DependInfo.cmake "--color=" make[4]: Entering directory '/build/reproducible-path/libslow5lib-0.7.0+dfsg/obj-aarch64-linux-gnu' cd /build/reproducible-path/libslow5lib-0.7.0+dfsg/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/reproducible-path/libslow5lib-0.7.0+dfsg /build/reproducible-path/libslow5lib-0.7.0+dfsg /build/reproducible-path/libslow5lib-0.7.0+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/libslow5lib-0.7.0+dfsg/obj-aarch64-linux-gnu /build/reproducible-path/libslow5lib-0.7.0+dfsg/obj-aarch64-linux-gnu/CMakeFiles/slow5.dir/DependInfo.cmake "--color=" make[4]: Leaving directory '/build/reproducible-path/libslow5lib-0.7.0+dfsg/obj-aarch64-linux-gnu' make -f CMakeFiles/slow5_static.dir/build.make CMakeFiles/slow5_static.dir/build make[4]: Leaving directory '/build/reproducible-path/libslow5lib-0.7.0+dfsg/obj-aarch64-linux-gnu' make -f CMakeFiles/slow5.dir/build.make CMakeFiles/slow5.dir/build make[4]: Entering directory '/build/reproducible-path/libslow5lib-0.7.0+dfsg/obj-aarch64-linux-gnu' make[4]: Entering directory '/build/reproducible-path/libslow5lib-0.7.0+dfsg/obj-aarch64-linux-gnu' [ 10%] Building C object CMakeFiles/slow5_static.dir/src/slow5_idx.c.o [ 20%] Building C object CMakeFiles/slow5_static.dir/src/slow5.c.o [ 30%] Building C object CMakeFiles/slow5.dir/src/slow5.c.o /usr/bin/cc -D_GLIBCXX_DEBUG -I/build/reproducible-path/libslow5lib-0.7.0+dfsg/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libslow5lib-0.7.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wall -O2 -std=c99 -DSLOW5_USE_ZSTD -MD -MT CMakeFiles/slow5_static.dir/src/slow5_idx.c.o -MF CMakeFiles/slow5_static.dir/src/slow5_idx.c.o.d -o CMakeFiles/slow5_static.dir/src/slow5_idx.c.o -c /build/reproducible-path/libslow5lib-0.7.0+dfsg/src/slow5_idx.c [ 40%] Building C object CMakeFiles/slow5.dir/src/slow5_idx.c.o [ 50%] Building C object CMakeFiles/slow5_static.dir/src/slow5_misc.c.o [ 60%] Building C object CMakeFiles/slow5.dir/src/slow5_misc.c.o /usr/bin/cc -D_GLIBCXX_DEBUG -Dslow5_EXPORTS -I/build/reproducible-path/libslow5lib-0.7.0+dfsg/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libslow5lib-0.7.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wall -O2 -std=c99 -fPIC -DSLOW5_USE_ZSTD -MD -MT CMakeFiles/slow5.dir/src/slow5_misc.c.o -MF CMakeFiles/slow5.dir/src/slow5_misc.c.o.d -o CMakeFiles/slow5.dir/src/slow5_misc.c.o -c /build/reproducible-path/libslow5lib-0.7.0+dfsg/src/slow5_misc.c /usr/bin/cc -D_GLIBCXX_DEBUG -Dslow5_EXPORTS -I/build/reproducible-path/libslow5lib-0.7.0+dfsg/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libslow5lib-0.7.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wall -O2 -std=c99 -fPIC -DSLOW5_USE_ZSTD -MD -MT CMakeFiles/slow5.dir/src/slow5_idx.c.o -MF CMakeFiles/slow5.dir/src/slow5_idx.c.o.d -o CMakeFiles/slow5.dir/src/slow5_idx.c.o -c /build/reproducible-path/libslow5lib-0.7.0+dfsg/src/slow5_idx.c [ 70%] Building C object CMakeFiles/slow5_static.dir/src/slow5_press.c.o /usr/bin/cc -D_GLIBCXX_DEBUG -Dslow5_EXPORTS -I/build/reproducible-path/libslow5lib-0.7.0+dfsg/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libslow5lib-0.7.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wall -O2 -std=c99 -fPIC -DSLOW5_USE_ZSTD -MD -MT CMakeFiles/slow5.dir/src/slow5.c.o -MF CMakeFiles/slow5.dir/src/slow5.c.o.d -o CMakeFiles/slow5.dir/src/slow5.c.o -c /build/reproducible-path/libslow5lib-0.7.0+dfsg/src/slow5.c /usr/bin/cc -D_GLIBCXX_DEBUG -I/build/reproducible-path/libslow5lib-0.7.0+dfsg/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libslow5lib-0.7.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wall -O2 -std=c99 -DSLOW5_USE_ZSTD -MD -MT CMakeFiles/slow5_static.dir/src/slow5_misc.c.o -MF CMakeFiles/slow5_static.dir/src/slow5_misc.c.o.d -o CMakeFiles/slow5_static.dir/src/slow5_misc.c.o -c /build/reproducible-path/libslow5lib-0.7.0+dfsg/src/slow5_misc.c [ 80%] Building C object CMakeFiles/slow5.dir/src/slow5_press.c.o /usr/bin/cc -D_GLIBCXX_DEBUG -Dslow5_EXPORTS -I/build/reproducible-path/libslow5lib-0.7.0+dfsg/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libslow5lib-0.7.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wall -O2 -std=c99 -fPIC -DSLOW5_USE_ZSTD -MD -MT CMakeFiles/slow5.dir/src/slow5_press.c.o -MF CMakeFiles/slow5.dir/src/slow5_press.c.o.d -o CMakeFiles/slow5.dir/src/slow5_press.c.o -c /build/reproducible-path/libslow5lib-0.7.0+dfsg/src/slow5_press.c /usr/bin/cc -D_GLIBCXX_DEBUG -I/build/reproducible-path/libslow5lib-0.7.0+dfsg/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libslow5lib-0.7.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wall -O2 -std=c99 -DSLOW5_USE_ZSTD -MD -MT CMakeFiles/slow5_static.dir/src/slow5.c.o -MF CMakeFiles/slow5_static.dir/src/slow5.c.o.d -o CMakeFiles/slow5_static.dir/src/slow5.c.o -c /build/reproducible-path/libslow5lib-0.7.0+dfsg/src/slow5.c /usr/bin/cc -D_GLIBCXX_DEBUG -I/build/reproducible-path/libslow5lib-0.7.0+dfsg/include -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libslow5lib-0.7.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wall -O2 -std=c99 -DSLOW5_USE_ZSTD -MD -MT CMakeFiles/slow5_static.dir/src/slow5_press.c.o -MF CMakeFiles/slow5_static.dir/src/slow5_press.c.o.d -o CMakeFiles/slow5_static.dir/src/slow5_press.c.o -c /build/reproducible-path/libslow5lib-0.7.0+dfsg/src/slow5_press.c [ 90%] Linking C shared library libslow5.so /usr/bin/cmake -E cmake_link_script CMakeFiles/slow5.dir/link.txt --verbose=1 /usr/lib/gcc/aarch64-linux-gnu/15/../../../aarch64-linux-gnu/libzstd.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/bin/cc -fPIC -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libslow5lib-0.7.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wall -O2 -std=c99 -Wl,--dependency-file=CMakeFiles/slow5.dir/link.d -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libslow5.so.0 -o libslow5.so.0 CMakeFiles/slow5.dir/src/slow5.c.o CMakeFiles/slow5.dir/src/slow5_idx.c.o CMakeFiles/slow5.dir/src/slow5_misc.c.o CMakeFiles/slow5.dir/src/slow5_press.c.o -lzstd /usr/bin/cmake -E cmake_symlink_library libslow5.so.0 libslow5.so.0 libslow5.so make[4]: Leaving directory '/build/reproducible-path/libslow5lib-0.7.0+dfsg/obj-aarch64-linux-gnu' [ 90%] Built target slow5 [100%] Linking C static library libslow5_static.a /usr/bin/cmake -P CMakeFiles/slow5_static.dir/cmake_clean_target.cmake /usr/bin/cmake -E cmake_link_script CMakeFiles/slow5_static.dir/link.txt --verbose=1 /usr/bin/ar qc libslow5_static.a CMakeFiles/slow5_static.dir/src/slow5.c.o CMakeFiles/slow5_static.dir/src/slow5_idx.c.o CMakeFiles/slow5_static.dir/src/slow5_misc.c.o CMakeFiles/slow5_static.dir/src/slow5_press.c.o /usr/bin/ranlib libslow5_static.a make[4]: Leaving directory '/build/reproducible-path/libslow5lib-0.7.0+dfsg/obj-aarch64-linux-gnu' [100%] Built target slow5_static make[3]: Leaving directory '/build/reproducible-path/libslow5lib-0.7.0+dfsg/obj-aarch64-linux-gnu' /usr/bin/cmake -E cmake_progress_start /build/reproducible-path/libslow5lib-0.7.0+dfsg/obj-aarch64-linux-gnu/CMakeFiles 0 make[2]: Leaving directory '/build/reproducible-path/libslow5lib-0.7.0+dfsg/obj-aarch64-linux-gnu' for py in `py3versions -s`; do \ $py setup.py build; \ done /usr/lib/python3/dist-packages/setuptools/__init__.py:94: _DeprecatedInstaller: setuptools.installer and fetch_build_eggs are deprecated. !! ******************************************************************************** Requirements should be satisfied by a PEP 517 installer. If you are using pip, you can try `pip install --use-pep517`. ******************************************************************************** !! dist.fetch_build_eggs(dist.setup_requires) /usr/lib/python3/dist-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. !! ******************************************************************************** Please consider removing the following classifiers in favor of a SPDX license expression: License :: OSI Approved :: MIT License See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! self._finalize_license_expression() running build running build_ext Compiling python/pyslow5.pyx because it changed. [1/1] Cythonizing python/pyslow5.pyx building 'pyslow5' extension creating build/temp.linux-aarch64-cpython-313/python creating build/temp.linux-aarch64-cpython-313/src aarch64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libslow5lib-0.7.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Iinclude/ -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.13 -c python/pyslow5.c -o build/temp.linux-aarch64-cpython-313/python/pyslow5.o -g -Wall -O2 -std=c99 In file included from /usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarraytypes.h:1913, from /usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include/numpy/ndarrayobject.h:12, from /usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include/numpy/arrayobject.h:5, from python/pyslow5.c:1294: /usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] 17 | #warning "Using deprecated NumPy API, disable it with " \ | ^~~~~~~ python/pyslow5.c: In function ‘__pyx_pf_7pyslow5_4Open_60write_record’: python/pyslow5.c:42773:10: warning: ‘__pyx_v_ret’ may be used uninitialized [-Wmaybe-uninitialized] 42773 | if (__pyx_t_7) { | ^ python/pyslow5.c:40529:8: note: ‘__pyx_v_ret’ was declared here 40529 | long __pyx_v_ret; | ^~~~~~~~~~~ python/pyslow5.c: In function ‘__pyx_pf_7pyslow5_4Open_62write_record_batch’: python/pyslow5.c:46880:14: warning: ‘__pyx_v_ret’ may be used uninitialized [-Wmaybe-uninitialized] 46880 | if (__pyx_t_5) { | ^ python/pyslow5.c:43384:8: note: ‘__pyx_v_ret’ was declared here 43384 | long __pyx_v_ret; | ^~~~~~~~~~~ aarch64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libslow5lib-0.7.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Iinclude/ -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.13 -c python/slow5threads.c -o build/temp.linux-aarch64-cpython-313/python/slow5threads.o -g -Wall -O2 -std=c99 aarch64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libslow5lib-0.7.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Iinclude/ -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.13 -c src/slow5.c -o build/temp.linux-aarch64-cpython-313/src/slow5.o -g -Wall -O2 -std=c99 aarch64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libslow5lib-0.7.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Iinclude/ -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.13 -c src/slow5_idx.c -o build/temp.linux-aarch64-cpython-313/src/slow5_idx.o -g -Wall -O2 -std=c99 aarch64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libslow5lib-0.7.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Iinclude/ -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.13 -c src/slow5_misc.c -o build/temp.linux-aarch64-cpython-313/src/slow5_misc.o -g -Wall -O2 -std=c99 aarch64-linux-gnu-gcc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libslow5lib-0.7.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -Iinclude/ -I/usr/lib/aarch64-linux-gnu/python3-numpy/numpy/_core/include -I/usr/include/python3.13 -c src/slow5_press.c -o build/temp.linux-aarch64-cpython-313/src/slow5_press.o -g -Wall -O2 -std=c99 creating build/lib.linux-aarch64-cpython-313 aarch64-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libslow5lib-0.7.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-aarch64-cpython-313/python/pyslow5.o build/temp.linux-aarch64-cpython-313/python/slow5threads.o build/temp.linux-aarch64-cpython-313/src/slow5.o build/temp.linux-aarch64-cpython-313/src/slow5_idx.o build/temp.linux-aarch64-cpython-313/src/slow5_misc.o build/temp.linux-aarch64-cpython-313/src/slow5_press.o -L. -L/usr/lib/aarch64-linux-gnu -lm -lz -lstreamvbyte -o build/lib.linux-aarch64-cpython-313/pyslow5.cpython-313-aarch64-linux-gnu.so /lib/aarch64-linux-gnu/libm.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libmvec.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libz.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /usr/lib/aarch64-linux-gnu/libstreamvbyte.so: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/aarch64-linux-gnu/libc.so.6: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. /lib/ld-linux-aarch64.so.1: warning: GCS is required by -z gcs, but this shared library lacks the necessary property note. The dynamic loader might not enable GCS or refuse to load the program unless all the shared library dependencies have the GCS marking. make[1]: Leaving directory '/build/reproducible-path/libslow5lib-0.7.0+dfsg' debian/rules override_dh_auto_test make[1]: Entering directory '/build/reproducible-path/libslow5lib-0.7.0+dfsg' mkdir -p lib cp -a obj-aarch64-linux-gnu/libslow5_static.a lib/libslow5.a /usr/bin/make -C test zstd=1 make[2]: Entering directory '/build/reproducible-path/libslow5lib-0.7.0+dfsg/test' mkdir bin cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libslow5lib-0.7.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -Wall -Werror -std=gnu99 -DSLOW5_USE_ZSTD -Wdate-time -D_FORTIFY_SOURCE=2 -I ../include/ -I ../src/ endian_test.c -o bin/endian_test -Wl,-z,relro -Wl,-z,now ../lib/libslow5.a -lm -lz -lstreamvbyte -lzstd cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libslow5lib-0.7.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -Wall -Werror -std=gnu99 -DSLOW5_USE_ZSTD -Wdate-time -D_FORTIFY_SOURCE=2 -I ../include/ -I ../src/ unit_test_helpers.c -o bin/unit_test_helpers -Wl,-z,relro -Wl,-z,now ../lib/libslow5.a -lm -lz -lstreamvbyte -lzstd cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libslow5lib-0.7.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -Wall -Werror -std=gnu99 -DSLOW5_USE_ZSTD -Wdate-time -D_FORTIFY_SOURCE=2 -I ../include/ -I ../src/ unit_test_press.c -o bin/unit_test_press -Wl,-z,relro -Wl,-z,now ../lib/libslow5.a -lm -lz -lstreamvbyte -lzstd cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libslow5lib-0.7.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -Wall -Werror -std=gnu99 -DSLOW5_USE_ZSTD -Wdate-time -D_FORTIFY_SOURCE=2 -I ../include/ -I ../src/ unit_test_ascii.c -o bin/unit_test_ascii -Wl,-z,relro -Wl,-z,now ../lib/libslow5.a -lm -lz -lstreamvbyte -lzstd cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libslow5lib-0.7.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -Wall -Werror -std=gnu99 -DSLOW5_USE_ZSTD -Wdate-time -D_FORTIFY_SOURCE=2 -I ../include/ -I ../src/ unit_test_binary.c -o bin/unit_test_binary -Wl,-z,relro -Wl,-z,now ../lib/libslow5.a -lm -lz -lstreamvbyte -lzstd cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libslow5lib-0.7.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -Wall -Werror -std=gnu99 -DSLOW5_USE_ZSTD -Wdate-time -D_FORTIFY_SOURCE=2 -I ../include/ -I ../src/ convert_slow5_test.c -o bin/convert_slow5_test -Wl,-z,relro -Wl,-z,now ../lib/libslow5.a -lm -lz -lstreamvbyte -lzstd cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libslow5lib-0.7.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -Wall -Werror -std=gnu99 -DSLOW5_USE_ZSTD -Wdate-time -D_FORTIFY_SOURCE=2 -I ../include/ -I ../src/ unit_test_two_rg.c -o bin/unit_test_two_rg -Wl,-z,relro -Wl,-z,now ../lib/libslow5.a -lm -lz -lstreamvbyte -lzstd cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libslow5lib-0.7.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -Wall -Werror -std=gnu99 -DSLOW5_USE_ZSTD -Wdate-time -D_FORTIFY_SOURCE=2 -I ../include/ -I ../src/ unit_test_lossless.c -o bin/unit_test_lossless -Wl,-z,relro -Wl,-z,now ../lib/libslow5.a -lm -lz -lstreamvbyte -lzstd cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libslow5lib-0.7.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -Wall -Werror -std=gnu99 -DSLOW5_USE_ZSTD -Wdate-time -D_FORTIFY_SOURCE=2 -I ../include/ -I ../src/ unit_test_empty.c -o bin/unit_test_empty -Wl,-z,relro -Wl,-z,now ../lib/libslow5.a -lm -lz -lstreamvbyte -lzstd cc -g -O2 -Werror=implicit-function-declaration -ffile-prefix-map=/build/reproducible-path/libslow5lib-0.7.0+dfsg=. -fstack-protector-strong -fstack-clash-protection -Wformat -Werror=format-security -mbranch-protection=standard -g -Wall -Werror -std=gnu99 -DSLOW5_USE_ZSTD -Wdate-time -D_FORTIFY_SOURCE=2 -I ../include/ -I ../src/ unit_test_enum.c -o bin/unit_test_enum -Wl,-z,relro -Wl,-z,now ../lib/libslow5.a -lm -lz -lstreamvbyte -lzstd make[2]: Leaving directory '/build/reproducible-path/libslow5lib-0.7.0+dfsg/test' for pys in `py3versions -s`; do \ echo $pys; \ pydir=`$pys debian/get-pyver-dir.py`; \ echo $pydir; X=0; \ PYTHONPATH=`pwd`/build/$pydir $pys -m unittest -v python/test.py || X=$?; \ if [ "" != 0 ]; then exit $X; fi; \ done python3.13 lib.linux-aarch64-cpython-313 test_nonExistant_aux (python.test.TestAUX.test_nonExistant_aux) ... [slow5_idx_init::INFO] Index file not found. Creating an index at 'examples/example2.slow5.idx'. 29-Oct-26 07:10:14 - [WARNING]: get_read unknown aux name: noExistTest ok test_read_id (python.test.TestAUX.test_read_id) ... 29-Oct-26 07:10:14 - [WARNING]: get_read unknown aux name: noExistTest ok test_read_number (python.test.TestAUX.test_read_number) ... 29-Oct-26 07:10:14 - [WARNING]: get_read unknown aux name: noExistTest ok test_start_mux (python.test.TestAUX.test_start_mux) ... 29-Oct-26 07:10:14 - [WARNING]: get_read unknown aux name: noExistTest ok test_get_aux_names (python.test.TestAuxAll.test_get_aux_names) ... ok test_get_aux_types (python.test.TestAuxAll.test_get_aux_types) ... ok test_get_read_all_aux (python.test.TestAuxAll.test_get_read_all_aux) ... ok test_seq_reads_pA_aux_all (python.test.TestAuxAll.test_seq_reads_pA_aux_all) ... ok test_class_methods (python.test.TestBase.test_class_methods) ... [slow5_idx_init::INFO] Index file not found. Creating an index at 'examples/example.slow5.idx'. ok test_digitisation (python.test.TestBase.test_digitisation) ... ok test_len_raw_signal (python.test.TestBase.test_len_raw_signal) ... ok test_offset (python.test.TestBase.test_offset) ... ok test_pylen_signal (python.test.TestBase.test_pylen_signal) ... ok test_range (python.test.TestBase.test_range) ... ok test_read_group (python.test.TestBase.test_read_group) ... ok test_read_id (python.test.TestBase.test_read_id) ... ok test_read_type (python.test.TestBase.test_read_type) ... ok test_sampling_rate (python.test.TestBase.test_sampling_rate) ... ok test_signal (python.test.TestBase.test_signal) ... ok test_get_all_headers (python.test.TestHeaders.test_get_all_headers) ... ok test_get_header_names (python.test.TestHeaders.test_get_header_names) ... ok test_digitisation (python.test.TestRandomAccess.test_digitisation) ... ok test_len_raw_signal (python.test.TestRandomAccess.test_len_raw_signal) ... ok test_offset (python.test.TestRandomAccess.test_offset) ... ok test_pylen_signal (python.test.TestRandomAccess.test_pylen_signal) ... ok test_range (python.test.TestRandomAccess.test_range) ... ok test_read_group (python.test.TestRandomAccess.test_read_group) ... ok test_read_id (python.test.TestRandomAccess.test_read_id) ... ok test_sampling_rate (python.test.TestRandomAccess.test_sampling_rate) ... ok test_signal (python.test.TestRandomAccess.test_signal) ... ok test_seq_reads (python.test.TestSequentialRead.test_seq_reads) ... ok test_get_empty_header (python.test.TestWrite.test_get_empty_header) ... ok test_get_empty_record (python.test.TestWrite.test_get_empty_record) ... ok test_write_header (python.test.TestWrite.test_write_header) ... ok test_write_records (python.test.TestWrite.test_write_records) ... ok test_get_empty_aux (python.test.TestWriteAux.test_get_empty_aux) ... ok test_write_records_aux (python.test.TestWriteAux.test_write_records_aux) ... ok test_write_matches_read (python.test.TestWriteData.test_write_matches_read) ... [slow5_idx_init::INFO] Index file not found. Creating an index at 'examples/example_write.slow5.idx'. ok test_base_reads (python.test.TestYieldRead.test_base_reads) ... ok test_reads_with_no_exist (python.test.TestYieldRead.test_reads_with_no_exist) ... [slow5_idx_get::ERROR] Read ID 'null_read' was not found. At src/slow5_idx.c:441 ok test_seq_reads_multi (python.test.testMultiThreading.test_seq_reads_multi) ... ok test_get_reads_multi (python.test.testMultiThreadingRandom.test_get_reads_multi) ... ok ---------------------------------------------------------------------- Ran 42 tests in 0.376s OK r0 r1 r2 r3 r4 r5 0a238451-b9ed-446d-a152-badd074006c4 0d624d4b-671f-40b8-9798-84f2ccc4d7fc r0 r1 r2 r3 r4 r5 0a238451-b9ed-446d-a152-badd074006c4 0d624d4b-671f-40b8-9798-84f2ccc4d7fc make[1]: Leaving directory '/build/reproducible-path/libslow5lib-0.7.0+dfsg' create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=cmake dh_prep -O--buildsystem=cmake dh_auto_install -O--buildsystem=cmake cd obj-aarch64-linux-gnu && make -j12 install DESTDIR=/build/reproducible-path/libslow5lib-0.7.0\+dfsg/debian/tmp AM_UPDATE_INFO_DIR=no INSTALL="install --strip-program=true" make[1]: Entering directory '/build/reproducible-path/libslow5lib-0.7.0+dfsg/obj-aarch64-linux-gnu' /usr/bin/cmake -S/build/reproducible-path/libslow5lib-0.7.0+dfsg -B/build/reproducible-path/libslow5lib-0.7.0+dfsg/obj-aarch64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall make[2]: Entering directory '/build/reproducible-path/libslow5lib-0.7.0+dfsg/obj-aarch64-linux-gnu' make[2]: Nothing to be done for 'preinstall'. make[2]: Leaving directory '/build/reproducible-path/libslow5lib-0.7.0+dfsg/obj-aarch64-linux-gnu' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "None" -- Installing: /build/reproducible-path/libslow5lib-0.7.0+dfsg/debian/tmp/usr/lib/aarch64-linux-gnu/libslow5.so.0 -- Installing: /build/reproducible-path/libslow5lib-0.7.0+dfsg/debian/tmp/usr/lib/aarch64-linux-gnu/libslow5.so -- Up-to-date: /build/reproducible-path/libslow5lib-0.7.0+dfsg/debian/tmp/usr/lib/aarch64-linux-gnu/libslow5.so.0 -- Up-to-date: /build/reproducible-path/libslow5lib-0.7.0+dfsg/debian/tmp/usr/lib/aarch64-linux-gnu/libslow5.so -- Installing: /build/reproducible-path/libslow5lib-0.7.0+dfsg/debian/tmp/usr/lib/aarch64-linux-gnu/libslow5_static.a make[1]: Leaving directory '/build/reproducible-path/libslow5lib-0.7.0+dfsg/obj-aarch64-linux-gnu' debian/rules override_dh_install make[1]: Entering directory '/build/reproducible-path/libslow5lib-0.7.0+dfsg' mv debian/tmp/usr/lib/aarch64-linux-gnu/libslow5_static.a debian/tmp/usr/lib/aarch64-linux-gnu/libslow5.a d-shlibmove --commit \ --t64 \ --multiarch \ --devunversioned \ --exclude-la \ --movedev include usr \ debian/tmp/usr/lib/aarch64-linux-gnu/libslow5.so Library package automatic movement utility --> libzstd-dev package exists. set -e install -d -m 755 debian/libslow5-dev/usr/lib/aarch64-linux-gnu install -d -m 755 debian/libslow5-0t64/usr/lib/aarch64-linux-gnu mv debian/tmp/usr/lib/aarch64-linux-gnu/libslow5.a debian/libslow5-dev/usr/lib/aarch64-linux-gnu mv debian/tmp/usr/lib/aarch64-linux-gnu/libslow5.so debian/libslow5-dev/usr/lib/aarch64-linux-gnu mv /build/reproducible-path/libslow5lib-0.7.0+dfsg/debian/tmp/usr/lib/aarch64-linux-gnu/libslow5.so.0 debian/libslow5-0t64/usr/lib/aarch64-linux-gnu PKGDEV=libslow5-dev PKGSHL=libslow5-0t64 install -d -m 755 debian/libslow5-dev/usr mv include debian/libslow5-dev/usr dh_install dh_install -plibslow5-dev src/*.h usr/include/slow5/ dh_install -ppython3-slow5 build/lib.*-*/* usr/lib/python3/dist-packages/ make[1]: Leaving directory '/build/reproducible-path/libslow5lib-0.7.0+dfsg' debian/rules execute_after_dh_install make[1]: Entering directory '/build/reproducible-path/libslow5lib-0.7.0+dfsg' dh_numpy3 Possible precedence issue with control flow operator (return) at /usr/bin/dh_numpy3 line 57. dh_numpy3: warning: skipping binary package libslow5-0t64 which does not depend on the NumPy C ABI dh_numpy3: warning: skipping binary package libslow5-dev which does not depend on the NumPy C ABI make[1]: Leaving directory '/build/reproducible-path/libslow5lib-0.7.0+dfsg' dh_installdocs -O--buildsystem=cmake dh_installchangelogs -O--buildsystem=cmake debian/rules override_dh_installexamples make[1]: Entering directory '/build/reproducible-path/libslow5lib-0.7.0+dfsg' dh_installexamples dh_installexamples -ppython3-slow5 python/example.py dh_installexamples -ppython3-slow5 examples/*.slow5 make[1]: Leaving directory '/build/reproducible-path/libslow5lib-0.7.0+dfsg' dh_python3 -O--buildsystem=cmake dh_installsystemduser -O--buildsystem=cmake dh_lintian -O--buildsystem=cmake dh_perl -O--buildsystem=cmake dh_link -O--buildsystem=cmake dh_strip_nondeterminism -O--buildsystem=cmake dh_compress -O--buildsystem=cmake dh_fixperms -O--buildsystem=cmake dh_missing -O--buildsystem=cmake dh_dwz -a -O--buildsystem=cmake dh_strip -a -O--buildsystem=cmake dh_makeshlibs -a -O--buildsystem=cmake dh_shlibdeps -a -O--buildsystem=cmake dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 from: /lib/ld-linux-aarch64.so.1 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 to: /lib/ld-linux-aarch64.so.1.usr-is-merged dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 from: /lib/ld-linux-aarch64.so.1 dpkg-shlibdeps: warning: diversions involved - output may be incorrect diversion by libc6 to: /lib/ld-linux-aarch64.so.1.usr-is-merged dpkg-shlibdeps: warning: symbol zigzag_delta_decode used by debian/libslow5-0t64/usr/lib/aarch64-linux-gnu/libslow5.so.0 found in none of the libraries dpkg-shlibdeps: warning: symbol deflateInit2_ used by debian/libslow5-0t64/usr/lib/aarch64-linux-gnu/libslow5.so.0 found in none of the libraries dpkg-shlibdeps: warning: symbol inflate used by debian/libslow5-0t64/usr/lib/aarch64-linux-gnu/libslow5.so.0 found in none of the libraries dpkg-shlibdeps: warning: symbol inflateEnd used by debian/libslow5-0t64/usr/lib/aarch64-linux-gnu/libslow5.so.0 found in none of the libraries dpkg-shlibdeps: warning: symbol streamvbyte_encode used by debian/libslow5-0t64/usr/lib/aarch64-linux-gnu/libslow5.so.0 found in none of the libraries dpkg-shlibdeps: warning: symbol inflateReset used by debian/libslow5-0t64/usr/lib/aarch64-linux-gnu/libslow5.so.0 found in none of the libraries dpkg-shlibdeps: warning: symbol inflateInit2_ used by debian/libslow5-0t64/usr/lib/aarch64-linux-gnu/libslow5.so.0 found in none of the libraries dpkg-shlibdeps: warning: symbol deflate used by debian/libslow5-0t64/usr/lib/aarch64-linux-gnu/libslow5.so.0 found in none of the libraries dpkg-shlibdeps: warning: symbol zigzag_delta_encode used by debian/libslow5-0t64/usr/lib/aarch64-linux-gnu/libslow5.so.0 found in none of the libraries dpkg-shlibdeps: warning: symbol streamvbyte_decode used by debian/libslow5-0t64/usr/lib/aarch64-linux-gnu/libslow5.so.0 found in none of the libraries dpkg-shlibdeps: warning: 2 other similar warnings have been skipped (use -v to see them all) dh_installdeb -O--buildsystem=cmake dh_gencontrol -O--buildsystem=cmake dpkg-gencontrol: warning: Depends field of package libslow5-dev: substitution variable ${shlibs:Depends} used, but is not defined dpkg-gencontrol: warning: package libslow5-dev: substitution variable ${devlibs:Depends} unused, but is defined dh_md5sums -O--buildsystem=cmake dh_builddeb -O--buildsystem=cmake dpkg-deb: building package 'libslow5-0t64' in '../libslow5-0t64_0.7.0+dfsg-3_arm64.deb'. dpkg-deb: building package 'libslow5-dev' in '../libslow5-dev_0.7.0+dfsg-3_arm64.deb'. dpkg-deb: building package 'libslow5-0t64-dbgsym' in '../libslow5-0t64-dbgsym_0.7.0+dfsg-3_arm64.deb'. dpkg-deb: building package 'python3-slow5-dbgsym' in '../python3-slow5-dbgsym_0.7.0+dfsg-3_arm64.deb'. dpkg-deb: building package 'python3-slow5' in '../python3-slow5_0.7.0+dfsg-3_arm64.deb'. dpkg-genbuildinfo --build=binary -O../libslow5lib_0.7.0+dfsg-3_arm64.buildinfo dpkg-genchanges --build=binary -O../libslow5lib_0.7.0+dfsg-3_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/1374619 and its subdirectories I: Current time: Thu Oct 29 07:10:21 -12 2026 I: pbuilder-time-stamp: 1793301021 Fri Sep 26 12:47:24 UTC 2025 I: 1st build successful. Starting 2nd build on remote node codethink04-arm64.debian.net. Fri Sep 26 12:47:24 UTC 2025 I: Preparing to do remote build '2' on codethink04-arm64.debian.net. Fri Sep 26 12:49:19 UTC 2025 I: Deleting $TMPDIR on codethink04-arm64.debian.net. Fri Sep 26 12:49:20 UTC 2025 I: libslow5lib_0.7.0+dfsg-3_arm64.changes: Format: 1.8 Date: Wed, 24 Jul 2024 22:36:50 +0200 Source: libslow5lib Binary: libslow5-0t64 libslow5-0t64-dbgsym libslow5-dev python3-slow5 python3-slow5-dbgsym Architecture: arm64 Version: 0.7.0+dfsg-3 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Étienne Mollier Description: libslow5-0t64 - library for reading & writing SLOW5 files libslow5-dev - header and static library for reading & writing SLOW5 files python3-slow5 - Python3 modul for reading & writing SLOW5 files Closes: 1075205 Changes: libslow5lib (0.7.0+dfsg-3) unstable; urgency=medium . * use_debian_packaged_streamvbyte.patch: fix a type error. (Closes: #1075205) * d/control: add myself to uploaders. * d/control: declare compliance to standards version 4.7.0. * d/s/lintian-overrides: flag error caused by t64 transition. Checksums-Sha1: 9fba0a56d39cdd0c60ebd28cacdab3b03f7bc251 170308 libslow5-0t64-dbgsym_0.7.0+dfsg-3_arm64.deb f6fd831e1ef68962d3d1e7c31854ad83e3c097d4 54532 libslow5-0t64_0.7.0+dfsg-3_arm64.deb 2906e7782f8d27346bc244c2ff6885af681cf5ac 78640 libslow5-dev_0.7.0+dfsg-3_arm64.deb f593e8323700f81ec2de92f0a5aaa071421a3649 8559 libslow5lib_0.7.0+dfsg-3_arm64.buildinfo b1048835f2c904cbaab4d97cffab625176e46675 1370660 python3-slow5-dbgsym_0.7.0+dfsg-3_arm64.deb 442fd690409604f03f0e3a6ac6bb553fa68695bc 393316 python3-slow5_0.7.0+dfsg-3_arm64.deb Checksums-Sha256: c3ed9d0cef9993d1a2aa01df9a2eb6223c796d5a2fd79535eaf081014c822697 170308 libslow5-0t64-dbgsym_0.7.0+dfsg-3_arm64.deb 091efb777ad4f702f021171e0e158ec72242f8230cb13460d7c155fb5188b095 54532 libslow5-0t64_0.7.0+dfsg-3_arm64.deb 463c84ac6c3dfbf9747103868b9128e32ad7041d4b37f440cd711abedd5f0e03 78640 libslow5-dev_0.7.0+dfsg-3_arm64.deb c2987e6609449f78ef519f4e2d352c8abf65c0b48e6cfa15be94dcc26cb6e91b 8559 libslow5lib_0.7.0+dfsg-3_arm64.buildinfo eb269c8a5cfb82005565d9b7365261b19994a88866137d646f58e863b7cb6dbc 1370660 python3-slow5-dbgsym_0.7.0+dfsg-3_arm64.deb 27300f86df9961d2166ede476b3424d1ef651ab4cd5b116ed2742edabd6a7755 393316 python3-slow5_0.7.0+dfsg-3_arm64.deb Files: 5a56fb517820176b042f23335300aed3 170308 debug optional libslow5-0t64-dbgsym_0.7.0+dfsg-3_arm64.deb efd9b749c4965c34064545e5ed90a7c4 54532 libs optional libslow5-0t64_0.7.0+dfsg-3_arm64.deb 95bd597e31766ee9a1ab9f74ff3b6b88 78640 libdevel optional libslow5-dev_0.7.0+dfsg-3_arm64.deb 5970f6c9deff620fc1627fe502ae7ca1 8559 science optional libslow5lib_0.7.0+dfsg-3_arm64.buildinfo 23184b82f4ff16ef105010933fdc5941 1370660 debug optional python3-slow5-dbgsym_0.7.0+dfsg-3_arm64.deb 940e39e4a0d215c17cbda7f1d03fc927 393316 python optional python3-slow5_0.7.0+dfsg-3_arm64.deb Fri Sep 26 12:49:20 UTC 2025 I: diffoscope 306 will be used to compare the two builds: Running as unit: rb-diffoscope-arm64_4-99703.service; invocation ID: 5d42ef3760b64cdcb74c8bbbf64d9e81 # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.rpx0fJ0b/libslow5lib_0.7.0+dfsg-3.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.rpx0fJ0b/libslow5lib_0.7.0+dfsg-3.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.rpx0fJ0b/libslow5lib_0.7.0+dfsg-3.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.rpx0fJ0b/b1/libslow5lib_0.7.0+dfsg-3_arm64.changes /srv/reproducible-results/rbuild-debian/r-b-build.rpx0fJ0b/b2/libslow5lib_0.7.0+dfsg-3_arm64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call diffoscope.comparators.binary.FilesystemFile ## main (total time: 0.003s) 0.003s 2 calls outputs 0.000s 1 call cleanup Finished with result: success Main processes terminated with: code=exited, status=0/SUCCESS Service runtime: 234ms CPU time consumed: 193ms Memory peak: 16.9M (swap: 0B) Fri Sep 26 12:49:21 UTC 2025 I: diffoscope 306 found no differences in the changes files, and a .buildinfo file also exists. Fri Sep 26 12:49:21 UTC 2025 I: libslow5lib from forky built successfully and reproducibly on arm64. Fri Sep 26 12:49:21 UTC 2025 I: Removing signed libslow5lib_0.7.0+dfsg-3_arm64.buildinfo.asc files: removed './b1/libslow5lib_0.7.0+dfsg-3_arm64.buildinfo.asc' removed './b2/libslow5lib_0.7.0+dfsg-3_arm64.buildinfo.asc'