Tue Oct 27 10:59:42 UTC 2020 I: starting to build sigma-align/buster/i386 on jenkins on '2020-10-27 10:59' Tue Oct 27 10:59:42 UTC 2020 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/i386_15/12039/console.log Tue Oct 27 10:59:42 UTC 2020 I: Downloading source for buster/sigma-align=1.1.3-6 --2020-10-27 10:59:42-- http://deb.debian.org/debian/pool/main/s/sigma-align/sigma-align_1.1.3-6.dsc Connecting to 78.137.99.97:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2018 (2.0K) Saving to: ‘sigma-align_1.1.3-6.dsc’ 0K . 100% 206M=0s 2020-10-27 10:59:42 (206 MB/s) - ‘sigma-align_1.1.3-6.dsc’ saved [2018/2018] Tue Oct 27 10:59:42 UTC 2020 I: sigma-align_1.1.3-6.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: sigma-align Binary: sigma-align Architecture: any Version: 1.1.3-6 Maintainer: Debian Med Packaging Team Uploaders: Charles Plessy , Andreas Tille Homepage: http://www.imsc.res.in/~rsidd/sigma/ Standards-Version: 4.2.1 Vcs-Browser: https://salsa.debian.org/med-team/sigma-align Vcs-Git: https://salsa.debian.org/med-team/sigma-align.git Build-Depends: debhelper (>= 11~), libglib2.0-dev Package-List: sigma-align deb science optional arch=any Checksums-Sha1: 38d77a438c2fd801144d78cd4418ded1f81438f3 129263 sigma-align_1.1.3.orig.tar.gz fe05d5faf0254b911532a1d8457d91d8bcf8e383 3204 sigma-align_1.1.3-6.debian.tar.xz Checksums-Sha256: e11deb2c184d96c263ed9129a063829d9872c47e6caa1675675faf1a02c44c91 129263 sigma-align_1.1.3.orig.tar.gz c34a6497bbc765cd4aa1a1f14ba891b7eb9d7aa4cd35921419bd126986d572c0 3204 sigma-align_1.1.3-6.debian.tar.xz Files: 36161cb7227b7c66e0c1a7a1b93aa81f 129263 sigma-align_1.1.3.orig.tar.gz 15dad3a6e6b9828c52c09c734a7b8b20 3204 sigma-align_1.1.3-6.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAlvJ2TMRHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtFsMQ//eaTj5H2hf8b/uxi8zjsVy8sGjZ88bEZX 9AA2bYMfgZtO8U+WPFD7haKOCgmfipVdbbPYKHoVcZihQYx2sDAlksGOaq4H9ysC ij/BTGpOF46TpInSnI4rycsJ3OZt03MW51lISxOm0yOGeiVdUKaEoPgebTQLagy4 vGrfa7flvVcH1ZLd1s/qixZUiLI40e0navra4T3dP4nSfQtbrvg5DUqxvWE0/etX e75KqGg0RHrNhNmUD2k0Tl2EY99fQOc+f9EdvEpEHy1GLV6UP7QvJWE1w1AdBvR8 xgOkF6mZQGIHy2h999eXe/msf8W+KVpRN4KRa544GNyuAJokSS09l1P9uD0OcUoy uroTS0NcYBk+89AlpG48Ywh5HS6bQSp40E6c2Rt5gq7Z6uwaTMaUQFQjKqvOAs4s O0V7obm9uZCgfkaNrUzaG4XlxpLI4V0vj5gJWInTpvHvOg747fTJ5nwrC2REwzXr vW2aRg6egvzwi6mkoN4KKn3DRWvFh0EPR/xf/5gOMVwTJAGAQUEoLx8GYN2eUQxn kBBq4OzuhAN86BKRvmfVTae16eoPZYkkmlVBD/63qfyovWOq2P4sSftehu/sPRvG iYcPOgFBEJ4w7fiD8q22XsdO/SQSCvKjesL9ObYdg65CCSvgS7iVnSq2DY3fwMyj u9ZFllqUffk= =uECo -----END PGP SIGNATURE----- Tue Oct 27 10:59:42 UTC 2020 I: Checking whether the package is not for us Tue Oct 27 10:59:42 UTC 2020 I: Starting 1st build on remote node profitbricks-build12-i386.debian.net. Tue Oct 27 10:59:42 UTC 2020 I: Preparing to do remote build '1' on profitbricks-build12-i386.debian.net. Tue Oct 27 11:01:58 UTC 2020 I: Deleting $TMPDIR on profitbricks-build12-i386.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Mon Oct 26 22:59:44 -12 2020 I: pbuilder-time-stamp: 1603796384 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/buster-reproducible-base.tgz] I: copying local configuration I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: using eatmydata during job I: Copying source file I: copying [sigma-align_1.1.3-6.dsc] I: copying [./sigma-align_1.1.3.orig.tar.gz] I: copying [./sigma-align_1.1.3-6.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/root/.gnupg/trustedkeys.kbx': General error gpgv: Signature made Fri Oct 19 01:16:35 2018 -12 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./sigma-align_1.1.3-6.dsc dpkg-source: info: extracting sigma-align in sigma-align-1.1.3 dpkg-source: info: unpacking sigma-align_1.1.3.orig.tar.gz dpkg-source: info: unpacking sigma-align_1.1.3-6.debian.tar.xz I: using fakeroot in build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/19350/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='i386' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=10' DISTRIBUTION='' HOME='/root' HOST_ARCH='i386' IFS=' ' INVOCATION_ID='8bad50a187dc41369defbef814d4058c' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' LD_LIBRARY_PATH='/usr/lib/libeatmydata' LD_PRELOAD='libeatmydata.so' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='19350' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.DkHHJqLKoh/pbuilderrc_Ydtl --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/buster-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.DkHHJqLKoh/b1 --logfile b1/build.log sigma-align_1.1.3-6.dsc' SUDO_GID='112' SUDO_UID='107' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://78.137.99.97:3128' I: uname -a Linux profitbricks-build12-i386 4.19.0-12-686-pae #1 SMP Debian 4.19.152-1 (2020-10-18) i686 GNU/Linux I: ls -l /bin total 5480 -rwxr-xr-x 1 root root 1302248 Apr 17 2019 bash -rwxr-xr-x 3 root root 38280 Jul 10 2019 bunzip2 -rwxr-xr-x 3 root root 38280 Jul 10 2019 bzcat lrwxrwxrwx 1 root root 6 Jul 10 2019 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2227 Jul 10 2019 bzdiff lrwxrwxrwx 1 root root 6 Jul 10 2019 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4877 Jun 24 2019 bzexe lrwxrwxrwx 1 root root 6 Jul 10 2019 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3641 Jul 10 2019 bzgrep -rwxr-xr-x 3 root root 38280 Jul 10 2019 bzip2 -rwxr-xr-x 1 root root 17768 Jul 10 2019 bzip2recover lrwxrwxrwx 1 root root 6 Jul 10 2019 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Jul 10 2019 bzmore -rwxr-xr-x 1 root root 38692 Feb 28 2019 cat -rwxr-xr-x 1 root root 75588 Feb 28 2019 chgrp -rwxr-xr-x 1 root root 63268 Feb 28 2019 chmod -rwxr-xr-x 1 root root 75588 Feb 28 2019 chown -rwxr-xr-x 1 root root 153732 Feb 28 2019 cp -rwxr-xr-x 1 root root 132820 Jan 17 2019 dash -rwxr-xr-x 1 root root 120676 Feb 28 2019 date -rwxr-xr-x 1 root root 92040 Feb 28 2019 dd -rwxr-xr-x 1 root root 100620 Feb 28 2019 df -rwxr-xr-x 1 root root 149736 Feb 28 2019 dir -rwxr-xr-x 1 root root 79412 Jan 9 2019 dmesg lrwxrwxrwx 1 root root 8 Sep 26 2018 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Sep 26 2018 domainname -> hostname -rwxr-xr-x 1 root root 34532 Feb 28 2019 echo -rwxr-xr-x 1 root root 28 Jan 7 2019 egrep -rwxr-xr-x 1 root root 34532 Feb 28 2019 false -rwxr-xr-x 1 root root 28 Jan 7 2019 fgrep -rwxr-xr-x 1 root root 67700 Jan 9 2019 findmnt -rwsr-xr-x 1 root root 30112 Apr 22 2020 fusermount -rwxr-xr-x 1 root root 206392 Jan 7 2019 grep -rwxr-xr-x 2 root root 2345 Jan 5 2019 gunzip -rwxr-xr-x 1 root root 6375 Jan 5 2019 gzexe -rwxr-xr-x 1 root root 100952 Jan 5 2019 gzip -rwxr-xr-x 1 root root 21916 Sep 26 2018 hostname -rwxr-xr-x 1 root root 79752 Feb 28 2019 ln -rwxr-xr-x 1 root root 55400 Jul 26 2018 login -rwxr-xr-x 1 root root 149736 Feb 28 2019 ls -rwxr-xr-x 1 root root 112032 Jan 9 2019 lsblk -rwxr-xr-x 1 root root 87972 Feb 28 2019 mkdir -rwxr-xr-x 1 root root 79748 Feb 28 2019 mknod -rwxr-xr-x 1 root root 46916 Feb 28 2019 mktemp -rwxr-xr-x 1 root root 42348 Jan 9 2019 more -rwsr-xr-x 1 root root 50592 Jan 9 2019 mount -rwxr-xr-x 1 root root 13724 Jan 9 2019 mountpoint -rwxr-xr-x 1 root root 157832 Feb 28 2019 mv lrwxrwxrwx 1 root root 8 Sep 26 2018 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Feb 14 2019 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 38660 Feb 28 2019 pwd lrwxrwxrwx 1 root root 4 Apr 17 2019 rbash -> bash -rwxr-xr-x 1 root root 46852 Feb 28 2019 readlink -rwxr-xr-x 1 root root 75588 Feb 28 2019 rm -rwxr-xr-x 1 root root 42756 Feb 28 2019 rmdir -rwxr-xr-x 1 root root 22276 Jan 21 2019 run-parts -rwxr-xr-x 1 root root 125036 Dec 22 2018 sed lrwxrwxrwx 1 root root 4 Oct 20 20:27 sh -> dash -rwxr-xr-x 1 root root 34532 Feb 28 2019 sleep -rwxr-xr-x 1 root root 79652 Feb 28 2019 stty -rwsr-xr-x 1 root root 71072 Jan 9 2019 su -rwxr-xr-x 1 root root 34564 Feb 28 2019 sync -rwxr-xr-x 1 root root 504024 Apr 23 2019 tar -rwxr-xr-x 1 root root 13860 Jan 21 2019 tempfile -rwxr-xr-x 1 root root 104292 Feb 28 2019 touch -rwxr-xr-x 1 root root 34532 Feb 28 2019 true -rwxr-xr-x 1 root root 17768 Apr 22 2020 ulockmgr_server -rwsr-xr-x 1 root root 30108 Jan 9 2019 umount -rwxr-xr-x 1 root root 34532 Feb 28 2019 uname -rwxr-xr-x 2 root root 2345 Jan 5 2019 uncompress -rwxr-xr-x 1 root root 149736 Feb 28 2019 vdir -rwxr-xr-x 1 root root 34208 Jan 9 2019 wdctl -rwxr-xr-x 1 root root 946 Jan 21 2019 which lrwxrwxrwx 1 root root 8 Sep 26 2018 ypdomainname -> hostname -rwxr-xr-x 1 root root 1983 Jan 5 2019 zcat -rwxr-xr-x 1 root root 1677 Jan 5 2019 zcmp -rwxr-xr-x 1 root root 5879 Jan 5 2019 zdiff -rwxr-xr-x 1 root root 29 Jan 5 2019 zegrep -rwxr-xr-x 1 root root 29 Jan 5 2019 zfgrep -rwxr-xr-x 1 root root 2080 Jan 5 2019 zforce -rwxr-xr-x 1 root root 7584 Jan 5 2019 zgrep -rwxr-xr-x 1 root root 2205 Jan 5 2019 zless -rwxr-xr-x 1 root root 1841 Jan 5 2019 zmore -rwxr-xr-x 1 root root 4552 Jan 5 2019 znew I: user script /srv/workspace/pbuilder/19350/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: i386 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper (>= 11~), libglib2.0-dev dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19234 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper (>= 11~); however: Package debhelper is not installed. pbuilder-satisfydepends-dummy depends on libglib2.0-dev; however: Package libglib2.0-dev is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdmainutils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libblkid-dev{a} libbsd0{a} libcroco3{a} libelf1{a} libexpat1{a} libffi-dev{a} libfile-stripnondeterminism-perl{a} libglib2.0-0{a} libglib2.0-bin{a} libglib2.0-data{a} libglib2.0-dev{a} libglib2.0-dev-bin{a} libicu63{a} libmagic-mgc{a} libmagic1{a} libmount-dev{a} libmpdec2{a} libncurses6{a} libpcre16-3{a} libpcre3-dev{a} libpcre32-3{a} libpcrecpp0v5{a} libpipeline1{a} libpython3-stdlib{a} libpython3.7-minimal{a} libpython3.7-stdlib{a} libreadline7{a} libselinux1-dev{a} libsepol1-dev{a} libsigsegv2{a} libssl1.1{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} mime-support{a} pkg-config{a} po-debconf{a} python3{a} python3-distutils{a} python3-lib2to3{a} python3-minimal{a} python3.7{a} python3.7-minimal{a} readline-common{a} sensible-utils{a} uuid-dev{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libgpm2 libltdl-dev libmail-sendmail-perl lynx shared-mime-info wget xdg-user-dirs 0 packages upgraded, 64 newly installed, 0 to remove and 0 not upgraded. Need to get 32.0 MB of archives. After unpacking 126 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian buster/main i386 libbsd0 i386 0.9.1-2 [104 kB] Get: 2 http://deb.debian.org/debian buster/main i386 bsdmainutils i386 11.1.2+b1 [193 kB] Get: 3 http://deb.debian.org/debian buster/main i386 libuchardet0 i386 0.0.6-3 [65.2 kB] Get: 4 http://deb.debian.org/debian buster/main i386 groff-base i386 1.22.4-3 [935 kB] Get: 5 http://deb.debian.org/debian buster/main i386 libpipeline1 i386 1.5.1-2 [33.3 kB] Get: 6 http://deb.debian.org/debian buster/main i386 man-db i386 2.8.5-2 [1284 kB] Get: 7 http://deb.debian.org/debian buster/main i386 libssl1.1 i386 1.1.1d-0+deb10u3 [1537 kB] Get: 8 http://deb.debian.org/debian buster/main i386 libpython3.7-minimal i386 3.7.3-2+deb10u2 [590 kB] Get: 9 http://deb.debian.org/debian buster/main i386 libexpat1 i386 2.2.6-2+deb10u1 [104 kB] Get: 10 http://deb.debian.org/debian buster/main i386 python3.7-minimal i386 3.7.3-2+deb10u2 [1746 kB] Get: 11 http://deb.debian.org/debian buster/main i386 python3-minimal i386 3.7.3-1 [36.6 kB] Get: 12 http://deb.debian.org/debian buster/main i386 mime-support all 3.62 [37.2 kB] Get: 13 http://deb.debian.org/debian buster/main i386 libmpdec2 i386 2.4.2-2 [83.2 kB] Get: 14 http://deb.debian.org/debian buster/main i386 readline-common all 7.0-5 [70.6 kB] Get: 15 http://deb.debian.org/debian buster/main i386 libreadline7 i386 7.0-5 [156 kB] Get: 16 http://deb.debian.org/debian buster/main i386 libpython3.7-stdlib i386 3.7.3-2+deb10u2 [1751 kB] Get: 17 http://deb.debian.org/debian buster/main i386 python3.7 i386 3.7.3-2+deb10u2 [330 kB] Get: 18 http://deb.debian.org/debian buster/main i386 libpython3-stdlib i386 3.7.3-1 [20.0 kB] Get: 19 http://deb.debian.org/debian buster/main i386 python3 i386 3.7.3-1 [61.5 kB] Get: 20 http://deb.debian.org/debian buster/main i386 sensible-utils all 0.0.12 [15.8 kB] Get: 21 http://deb.debian.org/debian buster/main i386 libmagic-mgc i386 1:5.35-4+deb10u1 [242 kB] Get: 22 http://deb.debian.org/debian buster/main i386 libmagic1 i386 1:5.35-4+deb10u1 [124 kB] Get: 23 http://deb.debian.org/debian buster/main i386 file i386 1:5.35-4+deb10u1 [66.3 kB] Get: 24 http://deb.debian.org/debian buster/main i386 gettext-base i386 0.19.8.1-9 [124 kB] Get: 25 http://deb.debian.org/debian buster/main i386 libsigsegv2 i386 2.12-2 [33.2 kB] Get: 26 http://deb.debian.org/debian buster/main i386 m4 i386 1.4.18-2 [205 kB] Get: 27 http://deb.debian.org/debian buster/main i386 autoconf all 2.69-11 [341 kB] Get: 28 http://deb.debian.org/debian buster/main i386 autotools-dev all 20180224.1 [77.0 kB] Get: 29 http://deb.debian.org/debian buster/main i386 automake all 1:1.16.1-4 [771 kB] Get: 30 http://deb.debian.org/debian buster/main i386 autopoint all 0.19.8.1-9 [434 kB] Get: 31 http://deb.debian.org/debian buster/main i386 libtool all 2.4.6-9 [547 kB] Get: 32 http://deb.debian.org/debian buster/main i386 dh-autoreconf all 19 [16.9 kB] Get: 33 http://deb.debian.org/debian buster/main i386 libarchive-zip-perl all 1.64-1 [96.8 kB] Get: 34 http://deb.debian.org/debian buster/main i386 libfile-stripnondeterminism-perl all 1.1.2-1 [19.8 kB] Get: 35 http://deb.debian.org/debian buster/main i386 dh-strip-nondeterminism all 1.1.2-1 [13.0 kB] Get: 36 http://deb.debian.org/debian buster/main i386 libelf1 i386 0.176-1.1 [166 kB] Get: 37 http://deb.debian.org/debian buster/main i386 dwz i386 0.12-3 [81.4 kB] Get: 38 http://deb.debian.org/debian buster/main i386 libglib2.0-0 i386 2.58.3-2+deb10u2 [1334 kB] Get: 39 http://deb.debian.org/debian buster/main i386 libicu63 i386 63.1-6+deb10u1 [8451 kB] Get: 40 http://deb.debian.org/debian buster/main i386 libxml2 i386 2.9.4+dfsg1-7+b3 [721 kB] Get: 41 http://deb.debian.org/debian buster/main i386 libcroco3 i386 0.6.12-3 [151 kB] Get: 42 http://deb.debian.org/debian buster/main i386 libncurses6 i386 6.1+20181013-2+deb10u2 [109 kB] Get: 43 http://deb.debian.org/debian buster/main i386 gettext i386 0.19.8.1-9 [1314 kB] Get: 44 http://deb.debian.org/debian buster/main i386 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get: 45 http://deb.debian.org/debian buster/main i386 po-debconf all 1.0.21 [248 kB] Get: 46 http://deb.debian.org/debian buster/main i386 debhelper all 12.1.1 [1016 kB] Get: 47 http://deb.debian.org/debian buster/main i386 uuid-dev i386 2.33.1-0.1 [94.0 kB] Get: 48 http://deb.debian.org/debian buster/main i386 libblkid-dev i386 2.33.1-0.1 [247 kB] Get: 49 http://deb.debian.org/debian buster/main i386 libffi-dev i386 3.2.1-9 [156 kB] Get: 50 http://deb.debian.org/debian buster/main i386 libglib2.0-data all 2.58.3-2+deb10u2 [1110 kB] Get: 51 http://deb.debian.org/debian buster/main i386 libglib2.0-bin i386 2.58.3-2+deb10u2 [129 kB] Get: 52 http://deb.debian.org/debian buster/main i386 python3-lib2to3 all 3.7.3-1 [76.7 kB] Get: 53 http://deb.debian.org/debian buster/main i386 python3-distutils all 3.7.3-1 [142 kB] Get: 54 http://deb.debian.org/debian buster/main i386 libglib2.0-dev-bin i386 2.58.3-2+deb10u2 [158 kB] Get: 55 http://deb.debian.org/debian buster/main i386 libmount-dev i386 2.33.1-0.1 [252 kB] Get: 56 http://deb.debian.org/debian buster/main i386 libpcre16-3 i386 2:8.39-12 [258 kB] Get: 57 http://deb.debian.org/debian buster/main i386 libpcre32-3 i386 2:8.39-12 [250 kB] Get: 58 http://deb.debian.org/debian buster/main i386 libpcrecpp0v5 i386 2:8.39-12 [153 kB] Get: 59 http://deb.debian.org/debian buster/main i386 libpcre3-dev i386 2:8.39-12 [656 kB] Get: 60 http://deb.debian.org/debian buster/main i386 libsepol1-dev i386 2.8-1 [370 kB] Get: 61 http://deb.debian.org/debian buster/main i386 libselinux1-dev i386 2.8-1+b1 [177 kB] Get: 62 http://deb.debian.org/debian buster/main i386 pkg-config i386 0.29-6 [64.7 kB] Get: 63 http://deb.debian.org/debian buster/main i386 zlib1g-dev i386 1:1.2.11.dfsg-1 [216 kB] Get: 64 http://deb.debian.org/debian buster/main i386 libglib2.0-dev i386 2.58.3-2+deb10u2 [1597 kB] Fetched 32.0 MB in 4s (7847 kB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libbsd0:i386. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19234 files and directories currently installed.) Preparing to unpack .../0-libbsd0_0.9.1-2_i386.deb ... Unpacking libbsd0:i386 (0.9.1-2) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../1-bsdmainutils_11.1.2+b1_i386.deb ... Unpacking bsdmainutils (11.1.2+b1) ... Selecting previously unselected package libuchardet0:i386. Preparing to unpack .../2-libuchardet0_0.0.6-3_i386.deb ... 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Setting up libsigsegv2:i386 (2.12-2) ... Setting up libpcre32-3:i386 (2:8.39-12) ... Setting up autopoint (0.19.8.1-9) ... Setting up pkg-config (0.29-6) ... Setting up zlib1g-dev:i386 (1:1.2.11.dfsg-1) ... Setting up sensible-utils (0.0.12) ... Setting up libuchardet0:i386 (0.0.6-3) ... Setting up libmpdec2:i386 (2.4.2-2) ... Setting up libbsd0:i386 (0.9.1-2) ... Setting up libelf1:i386 (0.176-1.1) ... Setting up readline-common (7.0-5) ... Setting up libxml2:i386 (2.9.4+dfsg1-7+b3) ... Setting up libreadline7:i386 (7.0-5) ... Setting up libfile-stripnondeterminism-perl (1.1.2-1) ... Setting up libblkid-dev:i386 (2.33.1-0.1) ... Setting up libpython3.7-stdlib:i386 (3.7.3-2+deb10u2) ... Setting up libtool (2.4.6-9) ... Setting up libpcre3-dev:i386 (2:8.39-12) ... Setting up libglib2.0-bin (2.58.3-2+deb10u2) ... Setting up m4 (1.4.18-2) ... Setting up bsdmainutils (11.1.2+b1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libcroco3:i386 (0.6.12-3) ... Setting up autoconf (2.69-11) ... Setting up dwz (0.12-3) ... Setting up groff-base (1.22.4-3) ... Setting up libmount-dev:i386 (2.33.1-0.1) ... Setting up libpython3-stdlib:i386 (3.7.3-1) ... Setting up automake (1:1.16.1-4) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up python3.7 (3.7.3-2+deb10u2) ... Setting up gettext (0.19.8.1-9) ... Setting up libselinux1-dev:i386 (2.8-1+b1) ... Setting up python3 (3.7.3-1) ... Setting up man-db (2.8.5-2) ... Not building database; man-db/auto-update is not 'true'. Setting up intltool-debian (0.35.0+20060710.5) ... Setting up python3-lib2to3 (3.7.3-1) ... Setting up python3-distutils (3.7.3-1) ... Setting up libglib2.0-dev-bin (2.58.3-2+deb10u2) ... Setting up po-debconf (1.0.21) ... Setting up libglib2.0-dev:i386 (2.58.3-2+deb10u2) ... Setting up dh-autoreconf (19) ... Setting up debhelper (12.1.1) ... Setting up dh-strip-nondeterminism (1.1.2-1) ... Processing triggers for libc-bin (2.28-10) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps Reading package lists... Building dependency tree... Reading state information... fakeroot is already the newest version (1.23-1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package I: Running cd /build/sigma-align-1.1.3/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b dpkg-buildpackage: info: source package sigma-align dpkg-buildpackage: info: source version 1.1.3-6 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 fakeroot debian/rules clean dh clean dh_clean debian/rules build dh build dh_update_autotools_config dh_autoreconf configure.ac:6: warning: AM_INIT_AUTOMAKE: two- and three-arguments forms are deprecated. For more info, see: configure.ac:6: https://www.gnu.org/software/automake/manual/automake.html#Modernize-AM_005fINIT_005fAUTOMAKE-invocation configure.ac:9: installing './compile' dh_auto_configure ./configure --build=i686-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-silent-rules --libdir=\${prefix}/lib/i386-linux-gnu --libexecdir=\${prefix}/lib/i386-linux-gnu --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking configure: WARNING: unrecognized options: --disable-maintainer-mode checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking whether gcc understands -c and -o together... yes checking whether make supports the include directive... yes (GNU style) checking dependency style of gcc... none checking for main in -lm... yes checking for pkg-config... /usr/bin/pkg-config checking pkg-config is at least version 0.9.0... yes checking for DEPS... yes checking how to run the C preprocessor... gcc -E checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking sys/time.h usability... yes checking sys/time.h presence... yes checking for sys/time.h... yes checking glib.h usability... yes checking glib.h presence... yes checking for glib.h... yes checking for an ANSI C-conforming const... yes checking for size_t... yes checking whether time.h and sys/time.h may both be included... yes checking for stdlib.h... (cached) yes checking for GNU libc compatible malloc... yes checking for gettimeofday... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating src/Makefile config.status: creating config.h config.status: executing depfiles commands configure: WARNING: unrecognized options: --disable-maintainer-mode dh_auto_build make -j10 make[1]: Entering directory '/build/sigma-align-1.1.3' make all-recursive make[2]: Entering directory '/build/sigma-align-1.1.3' Making all in src make[3]: Entering directory '/build/sigma-align-1.1.3/src' gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/glib-2.0 -I/usr/lib/i386-linux-gnu/glib-2.0/include -DDEBUG -O2 -g -g -O2 -ffile-prefix-map=/build/sigma-align-1.1.3=. -fstack-protector-strong -Wformat -Werror=format-security -c -o main.o main.c gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/glib-2.0 -I/usr/lib/i386-linux-gnu/glib-2.0/include -DDEBUG -O2 -g -g -O2 -ffile-prefix-map=/build/sigma-align-1.1.3=. -fstack-protector-strong -Wformat -Werror=format-security -c -o parseopts.o parseopts.c gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/glib-2.0 -I/usr/lib/i386-linux-gnu/glib-2.0/include -DDEBUG -O2 -g -g -O2 -ffile-prefix-map=/build/sigma-align-1.1.3=. -fstack-protector-strong -Wformat -Werror=format-security -c -o readfasta.o readfasta.c gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/glib-2.0 -I/usr/lib/i386-linux-gnu/glib-2.0/include -DDEBUG -O2 -g -g -O2 -ffile-prefix-map=/build/sigma-align-1.1.3=. -fstack-protector-strong -Wformat -Werror=format-security -c -o getbgprobs.o getbgprobs.c gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/glib-2.0 -I/usr/lib/i386-linux-gnu/glib-2.0/include -DDEBUG -O2 -g -g -O2 -ffile-prefix-map=/build/sigma-align-1.1.3=. -fstack-protector-strong -Wformat -Werror=format-security -c -o setbgprobs.o setbgprobs.c gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/glib-2.0 -I/usr/lib/i386-linux-gnu/glib-2.0/include -DDEBUG -O2 -g -g -O2 -ffile-prefix-map=/build/sigma-align-1.1.3=. -fstack-protector-strong -Wformat -Werror=format-security -c -o initseqfrags.o initseqfrags.c gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/glib-2.0 -I/usr/lib/i386-linux-gnu/glib-2.0/include -DDEBUG -O2 -g -g -O2 -ffile-prefix-map=/build/sigma-align-1.1.3=. -fstack-protector-strong -Wformat -Werror=format-security -c -o commonroutines.o commonroutines.c gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/glib-2.0 -I/usr/lib/i386-linux-gnu/glib-2.0/include -DDEBUG -O2 -g -g -O2 -ffile-prefix-map=/build/sigma-align-1.1.3=. -fstack-protector-strong -Wformat -Werror=format-security -c -o setbgw.o setbgw.c gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/glib-2.0 -I/usr/lib/i386-linux-gnu/glib-2.0/include -DDEBUG -O2 -g -g -O2 -ffile-prefix-map=/build/sigma-align-1.1.3=. -fstack-protector-strong -Wformat -Werror=format-security -c -o printhelp.o printhelp.c gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/glib-2.0 -I/usr/lib/i386-linux-gnu/glib-2.0/include -DDEBUG -O2 -g -g -O2 -ffile-prefix-map=/build/sigma-align-1.1.3=. -fstack-protector-strong -Wformat -Werror=format-security -c -o blockseq.o blockseq.c gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/glib-2.0 -I/usr/lib/i386-linux-gnu/glib-2.0/include -DDEBUG -O2 -g -g -O2 -ffile-prefix-map=/build/sigma-align-1.1.3=. -fstack-protector-strong -Wformat -Werror=format-security -c -o assemble_frags_to_seqs.o assemble_frags_to_seqs.c gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/glib-2.0 -I/usr/lib/i386-linux-gnu/glib-2.0/include -DDEBUG -O2 -g -g -O2 -ffile-prefix-map=/build/sigma-align-1.1.3=. -fstack-protector-strong -Wformat -Werror=format-security -c -o print_routines.o print_routines.c gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/glib-2.0 -I/usr/lib/i386-linux-gnu/glib-2.0/include -DDEBUG -O2 -g -g -O2 -ffile-prefix-map=/build/sigma-align-1.1.3=. -fstack-protector-strong -Wformat -Werror=format-security -c -o getopt_long.o getopt_long.c getopt_long.c: In function 'getopt_internal': getopt_long.c:295:4: warning: implicit declaration of function 'warnx' [-Wimplicit-function-declaration] warnx(illoptchar, optchar); ^~~~~ gcc -I/usr/include/glib-2.0 -I/usr/lib/i386-linux-gnu/glib-2.0/include -DDEBUG -O2 -g -g -O2 -ffile-prefix-map=/build/sigma-align-1.1.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -o sigma main.o parseopts.o readfasta.o getbgprobs.o setbgprobs.o initseqfrags.o commonroutines.o setbgw.o printhelp.o blockseq.o assemble_frags_to_seqs.o print_routines.o getopt_long.o -lglib-2.0 -lm make[3]: Leaving directory '/build/sigma-align-1.1.3/src' make[3]: Entering directory '/build/sigma-align-1.1.3' make[3]: Leaving directory '/build/sigma-align-1.1.3' make[2]: Leaving directory '/build/sigma-align-1.1.3' make[1]: Leaving directory '/build/sigma-align-1.1.3' dh_auto_test make -j10 check VERBOSE=1 make[1]: Entering directory '/build/sigma-align-1.1.3' Making check in src make[2]: Entering directory '/build/sigma-align-1.1.3/src' make[2]: Nothing to be done for 'check'. make[2]: Leaving directory '/build/sigma-align-1.1.3/src' make[2]: Entering directory '/build/sigma-align-1.1.3' make[2]: Leaving directory '/build/sigma-align-1.1.3' make[1]: Leaving directory '/build/sigma-align-1.1.3' create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary dh binary dh_testroot dh_prep dh_auto_install make -j10 install DESTDIR=/build/sigma-align-1.1.3/debian/sigma-align AM_UPDATE_INFO_DIR=no make[1]: Entering directory '/build/sigma-align-1.1.3' Making install in src make[2]: Entering directory '/build/sigma-align-1.1.3/src' make[3]: Entering directory '/build/sigma-align-1.1.3/src' make[3]: Nothing to be done for 'install-data-am'. /bin/mkdir -p '/build/sigma-align-1.1.3/debian/sigma-align/usr/bin' /usr/bin/install -c sigma '/build/sigma-align-1.1.3/debian/sigma-align/usr/bin' make[3]: Leaving directory '/build/sigma-align-1.1.3/src' make[2]: Leaving directory '/build/sigma-align-1.1.3/src' make[2]: Entering directory '/build/sigma-align-1.1.3' make[3]: Entering directory '/build/sigma-align-1.1.3' make[3]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/build/sigma-align-1.1.3/debian/sigma-align/usr/share/man/man1' /usr/bin/install -c -m 644 sigma.1 '/build/sigma-align-1.1.3/debian/sigma-align/usr/share/man/man1' make[3]: Leaving directory '/build/sigma-align-1.1.3' make[2]: Leaving directory '/build/sigma-align-1.1.3' make[1]: Leaving directory '/build/sigma-align-1.1.3' dh_installdocs dh_installchangelogs dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_strip dh_makeshlibs dh_shlibdeps dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'sigma-align' in '../sigma-align_1.1.3-6_i386.deb'. dpkg-deb: building package 'sigma-align-dbgsym' in '../sigma-align-dbgsym_1.1.3-6_i386.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../sigma-align_1.1.3-6_i386.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/19350 and its subdirectories I: Current time: Mon Oct 26 23:01:58 -12 2020 I: pbuilder-time-stamp: 1603796518 Tue Oct 27 11:01:59 UTC 2020 I: 1st build successful. Starting 2nd build on remote node profitbricks-build16-i386.debian.net. Tue Oct 27 11:01:59 UTC 2020 I: Preparing to do remote build '2' on profitbricks-build16-i386.debian.net. Tue Oct 27 11:02:28 UTC 2020 I: Deleting $TMPDIR on profitbricks-build16-i386.debian.net. Tue Oct 27 11:02:28 UTC 2020 I: sigma-align_1.1.3-6_i386.changes: Format: 1.8 Date: Fri, 19 Oct 2018 15:14:00 +0200 Source: sigma-align Binary: sigma-align sigma-align-dbgsym Architecture: i386 Version: 1.1.3-6 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: sigma-align - Simple greedy multiple alignment of non-coding DNA sequences Changes: sigma-align (1.1.3-6) unstable; urgency=medium . * debhelper 11 * Point Vcs fields to salsa.debian.org * Standards-Version: 4.2.1 Checksums-Sha1: 3c6b1182efbb09bc6f22b7e6dbeec59402893e58 52312 sigma-align-dbgsym_1.1.3-6_i386.deb 9fe38c93e9c56006341d6a771e8f6f7a092c4142 5650 sigma-align_1.1.3-6_i386.buildinfo 9669aeced50c3c67d623553e6fb979680a130e44 24832 sigma-align_1.1.3-6_i386.deb Checksums-Sha256: ebc6ab19df7d561bada9070fffe2353ddae3bafa2e7833132cbacc25d3101039 52312 sigma-align-dbgsym_1.1.3-6_i386.deb 5c92bcf0b5c88c966599e44732b4dae1e208407d3548ab7722d1d8a877592626 5650 sigma-align_1.1.3-6_i386.buildinfo 2ea68e1843b01c0a8d1b05639f666a9edb0f24cebb8d882550622a712fd8c42f 24832 sigma-align_1.1.3-6_i386.deb Files: 4376ad4ad04a70bd0a5397515491d049 52312 debug optional sigma-align-dbgsym_1.1.3-6_i386.deb b00f495bd1f8b3de0c2e6e34c6e50bb2 5650 science optional sigma-align_1.1.3-6_i386.buildinfo 12019d7fac3352d2be82f38229605af2 24832 science optional sigma-align_1.1.3-6_i386.deb Tue Oct 27 11:02:29 UTC 2020 I: diffoscope 161 will be used to compare the two builds: # Profiling output for: /usr/bin/diffoscope --html /srv/reproducible-results/rbuild-debian/tmp.DkHHJqLKoh/sigma-align_1.1.3-6.diffoscope.html --text /srv/reproducible-results/rbuild-debian/tmp.DkHHJqLKoh/sigma-align_1.1.3-6.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/tmp.DkHHJqLKoh/sigma-align_1.1.3-6.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/tmp.DkHHJqLKoh/b1/sigma-align_1.1.3-6_i386.changes /srv/reproducible-results/rbuild-debian/tmp.DkHHJqLKoh/b2/sigma-align_1.1.3-6_i386.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.383s) 0.383s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.020s) 0.020s 10 calls diffoscope.comparators.binary.FilesystemFile 0.000s 8 calls abc.DotChangesFile Tue Oct 27 11:02:32 UTC 2020 I: diffoscope 161 found no differences in the changes files, and a .buildinfo file also exists. Tue Oct 27 11:02:32 UTC 2020 I: sigma-align from buster built successfully and reproducibly on i386. Tue Oct 27 11:02:33 UTC 2020 I: Submitting .buildinfo files to external archives: Tue Oct 27 11:02:33 UTC 2020 I: Submitting 8.0K b1/sigma-align_1.1.3-6_i386.buildinfo.asc Tue Oct 27 11:02:35 UTC 2020 I: Submitting 8.0K b2/sigma-align_1.1.3-6_i386.buildinfo.asc Tue Oct 27 11:02:37 UTC 2020 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Tue Oct 27 11:02:37 UTC 2020 I: Done submitting .buildinfo files. Tue Oct 27 11:02:37 UTC 2020 I: Removing signed sigma-align_1.1.3-6_i386.buildinfo.asc files: removed './b1/sigma-align_1.1.3-6_i386.buildinfo.asc' removed './b2/sigma-align_1.1.3-6_i386.buildinfo.asc'