Tue Sep 15 13:24:13 UTC 2020 I: starting to build gudhi/buster/i386 on jenkins on '2020-09-15 13:23' Tue Sep 15 13:24:13 UTC 2020 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/i386_2/13417/console.log Tue Sep 15 13:24:13 UTC 2020 I: Downloading source for buster/gudhi=2.3.0+dfsg-2 --2020-09-15 13:24:13-- http://deb.debian.org/debian/pool/main/g/gudhi/gudhi_2.3.0+dfsg-2.dsc Connecting to 78.137.99.97:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2600 (2.5K) Saving to: ‘gudhi_2.3.0+dfsg-2.dsc’ 0K .. 100% 216M=0s 2020-09-15 13:24:13 (216 MB/s) - ‘gudhi_2.3.0+dfsg-2.dsc’ saved [2600/2600] Tue Sep 15 13:24:13 UTC 2020 I: gudhi_2.3.0+dfsg-2.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: gudhi Binary: libgudhi-dev, libgudhi-examples, libgudhi-doc, python3-gudhi, gudhui, gudhi-utils Architecture: any all Version: 2.3.0+dfsg-2 Maintainer: Gard Spreemann Homepage: http://gudhi.gforge.inria.fr/ Standards-Version: 4.2.1 Vcs-Browser: https://git.nonempty.org/debian-gudhi Vcs-Git: https://git.nonempty.org/debian-gudhi -b debian/sid Testsuite: autopkgtest Testsuite-Triggers: python3-all, python3-pytest Build-Depends: cmake (>= 3.1), cython3, debhelper (>= 11), dh-python, libboost-chrono-dev, libboost-filesystem-dev, libboost-program-options-dev, libboost-system-dev, libboost-test-dev, libboost-timer-dev, libcgal-dev (>> 4.11.0), libcgal-qt5-dev (>> 4.11.0), libeigen3-dev, libgmp-dev, libqglviewer-dev-qt5, libtbb-dev, python3-all-dev, python3-matplotlib, python3-pytest, python3-tk, qtbase5-dev Build-Depends-Indep: doxygen, graphviz Package-List: gudhi-utils deb math optional arch=any gudhui deb math optional arch=any libgudhi-dev deb libdevel optional arch=all libgudhi-doc deb doc optional arch=all libgudhi-examples deb misc optional arch=all python3-gudhi deb python optional arch=any Checksums-Sha1: 25d3773a117728e0141a5c044a80b8310a913a95 5492859 gudhi_2.3.0+dfsg.orig.tar.gz 22f314eeefb727f8b3633ec9a0ba5163d43758e5 9320 gudhi_2.3.0+dfsg-2.debian.tar.xz Checksums-Sha256: 7400042238a2aa22e7948cd50ccc75ec1b0a76a1d1fad145769a2fb1fde6a970 5492859 gudhi_2.3.0+dfsg.orig.tar.gz 7eec9fe93a6db1b81b9d2c2a7c66232adff02f877eb4c8b37ed3fae75eece63e 9320 gudhi_2.3.0+dfsg-2.debian.tar.xz Files: 3dbc3b4b7ff334914473f63a0276b0fa 5492859 gudhi_2.3.0+dfsg.orig.tar.gz 268d6d90693d742241561b5e7e69da8f 9320 gudhi_2.3.0+dfsg-2.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQIzBAEBCAAdFiEE/d0M/zhkJ3YwohhskWT6HRe9XTYFAlvPeLQACgkQkWT6HRe9 XTYu+RAAkQmT2tCb0FlLa1Et18OrmnGK3G3zNzeHLkYqRLL1m2Wag7RGIvH4nsEO DPAAakVCvLfcxHy4OUFPEF618Ih+nbDSf2WbyLAaEMkYZcTd/z0ERR3wOVJs2X1+ CdLsB3Ms+ZKR3aG8rTmOW1gQdiwFXmLvNJ9xW1sHMbgXUZlg8/QsZiefkrvd+4mH hqfsF2+wXm+JI9A+794BPDthgZvT6m1JBz3T9AmAVSawdZFTM2SVlUxVFuBL0CDW T+AfERA3uR0DbfP+xyOPx2lhsSETxhurdW9EEj0QcNzLqUZwBKe95gadBWI9BOv9 1Tur6I7+d4d4zlmz0wVd9qzoIZXB0n6Fx9i+EQJm4BLzwj/M66K2Qe2ym1dnq+xC v8Sy3pYul8m2Ef/LYbKBqN/7zPEPjn+z9HRrFTAtPOchsA303rJRcC0PoxqsdW2U DFW/zoiFBKo12KEUoQUGOKrFt23QqJvA0xO9tZpGOdv2qLiQVpP4YLGinH4gWDb4 owmfI6ab/If+MZtq1u89RVxLQYoeLsvRVBaSERLnyriA/Xi/fsfxmhAaiPTcC5N9 VivZbLxNSd579Ivwsi55y3nojyt77jhcO1YqL0BlR1oMjVP3KUygYcGrpg0xR8gl M2L2NQry1f9y144updmZamc8vtpTPWZouWpRVDyeyQNhJV9YaLA= =ucmY -----END PGP SIGNATURE----- Tue Sep 15 13:24:13 UTC 2020 I: Checking whether the package is not for us Tue Sep 15 13:24:13 UTC 2020 I: Starting 1st build on remote node profitbricks-build6-i386.debian.net. Tue Sep 15 13:24:13 UTC 2020 I: Preparing to do remote build '1' on profitbricks-build6-i386.debian.net. Tue Sep 15 13:33:43 UTC 2020 I: Deleting $TMPDIR on profitbricks-build6-i386.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Mon Oct 18 07:47:15 -12 2021 I: pbuilder-time-stamp: 1634586435 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/buster-reproducible-base.tgz] I: copying local configuration I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: using eatmydata during job I: Copying source file I: copying [gudhi_2.3.0+dfsg-2.dsc] I: copying [./gudhi_2.3.0+dfsg.orig.tar.gz] I: copying [./gudhi_2.3.0+dfsg-2.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/root/.gnupg/trustedkeys.kbx': General error gpgv: Signature made Tue Oct 23 07:38:28 2018 -12 gpgv: using RSA key FDDD0CFF3864277630A2186C9164FA1D17BD5D36 gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./gudhi_2.3.0+dfsg-2.dsc dpkg-source: info: extracting gudhi in gudhi-2.3.0+dfsg dpkg-source: info: unpacking gudhi_2.3.0+dfsg.orig.tar.gz dpkg-source: info: unpacking gudhi_2.3.0+dfsg-2.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying 0001-Disable-Sphinx-test-since-we-re-not-currently-buildi.patch dpkg-source: info: applying 0002-Disable-tests-that-use-DFSG-deleted-data-files.patch dpkg-source: info: applying 0003-Use-system-MathJax.patch dpkg-source: info: applying 0004-Don-t-set-runtime-library-dirs-for-Python-extensions.patch dpkg-source: info: applying 0005-Force-linking-of-Python-module-with-CGAL.patch dpkg-source: info: applying 0006-Force-linking-against-libatomic-for-parts-that-use-T.patch dpkg-source: info: applying 0007-Offline-header-for-docs.patch dpkg-source: info: applying 0008-Propagate-CXXFLAGS-when-building-Python-modules.patch I: using fakeroot in build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/10476/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='i386' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=18' DISTRIBUTION='' HOME='/root' HOST_ARCH='i386' IFS=' ' INVOCATION_ID='5601fc0fdd8b4a01b2989b01fb4492f6' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' LD_LIBRARY_PATH='/usr/lib/libeatmydata' LD_PRELOAD='libeatmydata.so' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='10476' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.NDDvDdIR6f/pbuilderrc_kEdN --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/buster-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.NDDvDdIR6f/b1 --logfile b1/build.log gudhi_2.3.0+dfsg-2.dsc' SUDO_GID='112' SUDO_UID='107' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://85.184.249.68:3128' I: uname -a Linux profitbricks-build6-i386 4.19.0-10-amd64 #1 SMP Debian 4.19.132-1 (2020-07-24) x86_64 GNU/Linux I: ls -l /bin total 5476 -rwxr-xr-x 1 root root 1302248 Apr 17 2019 bash -rwxr-xr-x 3 root root 38280 Jul 10 2019 bunzip2 -rwxr-xr-x 3 root root 38280 Jul 10 2019 bzcat lrwxrwxrwx 1 root root 6 Jul 10 2019 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2227 Jul 10 2019 bzdiff lrwxrwxrwx 1 root root 6 Jul 10 2019 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4877 Jun 24 2019 bzexe lrwxrwxrwx 1 root root 6 Jul 10 2019 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3641 Jul 10 2019 bzgrep -rwxr-xr-x 3 root root 38280 Jul 10 2019 bzip2 -rwxr-xr-x 1 root root 17768 Jul 10 2019 bzip2recover lrwxrwxrwx 1 root root 6 Jul 10 2019 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Jul 10 2019 bzmore -rwxr-xr-x 1 root root 38692 Feb 28 2019 cat -rwxr-xr-x 1 root root 75588 Feb 28 2019 chgrp -rwxr-xr-x 1 root root 63268 Feb 28 2019 chmod -rwxr-xr-x 1 root root 75588 Feb 28 2019 chown -rwxr-xr-x 1 root root 153732 Feb 28 2019 cp -rwxr-xr-x 1 root root 132820 Jan 17 2019 dash -rwxr-xr-x 1 root root 120676 Feb 28 2019 date -rwxr-xr-x 1 root root 92040 Feb 28 2019 dd -rwxr-xr-x 1 root root 100620 Feb 28 2019 df -rwxr-xr-x 1 root root 149736 Feb 28 2019 dir -rwxr-xr-x 1 root root 79412 Jan 9 2019 dmesg lrwxrwxrwx 1 root root 8 Sep 26 2018 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Sep 26 2018 domainname -> hostname -rwxr-xr-x 1 root root 34532 Feb 28 2019 echo -rwxr-xr-x 1 root root 28 Jan 7 2019 egrep -rwxr-xr-x 1 root root 34532 Feb 28 2019 false -rwxr-xr-x 1 root root 28 Jan 7 2019 fgrep -rwxr-xr-x 1 root root 67700 Jan 9 2019 findmnt -rwsr-xr-x 1 root root 30112 Apr 22 2020 fusermount -rwxr-xr-x 1 root root 206392 Jan 7 2019 grep -rwxr-xr-x 2 root root 2345 Jan 5 2019 gunzip -rwxr-xr-x 1 root root 6375 Jan 5 2019 gzexe -rwxr-xr-x 1 root root 100952 Jan 5 2019 gzip -rwxr-xr-x 1 root root 21916 Sep 26 2018 hostname -rwxr-xr-x 1 root root 79752 Feb 28 2019 ln -rwxr-xr-x 1 root root 55400 Jul 26 2018 login -rwxr-xr-x 1 root root 149736 Feb 28 2019 ls -rwxr-xr-x 1 root root 112032 Jan 9 2019 lsblk -rwxr-xr-x 1 root root 87972 Feb 28 2019 mkdir -rwxr-xr-x 1 root root 79748 Feb 28 2019 mknod -rwxr-xr-x 1 root root 46916 Feb 28 2019 mktemp -rwxr-xr-x 1 root root 42348 Jan 9 2019 more -rwsr-xr-x 1 root root 50592 Jan 9 2019 mount -rwxr-xr-x 1 root root 13724 Jan 9 2019 mountpoint -rwxr-xr-x 1 root root 157832 Feb 28 2019 mv lrwxrwxrwx 1 root root 8 Sep 26 2018 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Feb 14 2019 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 38660 Feb 28 2019 pwd lrwxrwxrwx 1 root root 4 Apr 17 2019 rbash -> bash -rwxr-xr-x 1 root root 46852 Feb 28 2019 readlink -rwxr-xr-x 1 root root 75588 Feb 28 2019 rm -rwxr-xr-x 1 root root 42756 Feb 28 2019 rmdir -rwxr-xr-x 1 root root 22276 Jan 21 2019 run-parts -rwxr-xr-x 1 root root 125036 Dec 22 2018 sed lrwxrwxrwx 1 root root 4 Oct 17 02:47 sh -> dash -rwxr-xr-x 1 root root 34532 Feb 28 2019 sleep -rwxr-xr-x 1 root root 79652 Feb 28 2019 stty -rwsr-xr-x 1 root root 71072 Jan 9 2019 su -rwxr-xr-x 1 root root 34564 Feb 28 2019 sync -rwxr-xr-x 1 root root 504024 Apr 23 2019 tar -rwxr-xr-x 1 root root 13860 Jan 21 2019 tempfile -rwxr-xr-x 1 root root 104292 Feb 28 2019 touch -rwxr-xr-x 1 root root 34532 Feb 28 2019 true -rwxr-xr-x 1 root root 17768 Apr 22 2020 ulockmgr_server -rwsr-xr-x 1 root root 30108 Jan 9 2019 umount -rwxr-xr-x 1 root root 34532 Feb 28 2019 uname -rwxr-xr-x 2 root root 2345 Jan 5 2019 uncompress -rwxr-xr-x 1 root root 149736 Feb 28 2019 vdir -rwxr-xr-x 1 root root 34208 Jan 9 2019 wdctl -rwxr-xr-x 1 root root 946 Jan 21 2019 which lrwxrwxrwx 1 root root 8 Sep 26 2018 ypdomainname -> hostname -rwxr-xr-x 1 root root 1983 Jan 5 2019 zcat -rwxr-xr-x 1 root root 1677 Jan 5 2019 zcmp -rwxr-xr-x 1 root root 5879 Jan 5 2019 zdiff -rwxr-xr-x 1 root root 29 Jan 5 2019 zegrep -rwxr-xr-x 1 root root 29 Jan 5 2019 zfgrep -rwxr-xr-x 1 root root 2080 Jan 5 2019 zforce -rwxr-xr-x 1 root root 7584 Jan 5 2019 zgrep -rwxr-xr-x 1 root root 2205 Jan 5 2019 zless -rwxr-xr-x 1 root root 1841 Jan 5 2019 zmore -rwxr-xr-x 1 root root 4552 Jan 5 2019 znew I: user script /srv/workspace/pbuilder/10476/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: i386 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: cmake (>= 3.1), cython3, debhelper (>= 11), dh-python, libboost-chrono-dev, libboost-filesystem-dev, libboost-program-options-dev, libboost-system-dev, libboost-test-dev, libboost-timer-dev, libcgal-dev (>> 4.11.0), libcgal-qt5-dev (>> 4.11.0), libeigen3-dev, libgmp-dev, libqglviewer-dev-qt5, libtbb-dev, python3-all-dev, python3-matplotlib, python3-pytest, python3-tk, qtbase5-dev, doxygen, graphviz dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19234 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on cmake (>= 3.1); however: Package cmake is not installed. pbuilder-satisfydepends-dummy depends on cython3; however: Package cython3 is not installed. pbuilder-satisfydepends-dummy depends on debhelper (>= 11); however: Package debhelper is not installed. pbuilder-satisfydepends-dummy depends on dh-python; however: Package dh-python is not installed. pbuilder-satisfydepends-dummy depends on libboost-chrono-dev; however: Package libboost-chrono-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-filesystem-dev; however: Package libboost-filesystem-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-program-options-dev; however: Package libboost-program-options-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-system-dev; however: Package libboost-system-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-test-dev; however: Package libboost-test-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-timer-dev; however: Package libboost-timer-dev is not installed. pbuilder-satisfydepends-dummy depends on libcgal-dev (>> 4.11.0); however: Package libcgal-dev is not installed. pbuilder-satisfydepends-dummy depends on libcgal-qt5-dev (>> 4.11.0); however: Package libcgal-qt5-dev is not installed. pbuilder-satisfydepends-dummy depends on libeigen3-dev; however: Package libeigen3-dev is not installed. pbuilder-satisfydepends-dummy depends on libgmp-dev; however: Package libgmp-dev is not installed. pbuilder-satisfydepends-dummy depends on libqglviewer-dev-qt5; however: Package libqglviewer-dev-qt5 is not installed. pbuilder-satisfydepends-dummy depends on libtbb-dev; however: Package libtbb-dev is not installed. pbuilder-satisfydepends-dummy depends on python3-all-dev; however: Package python3-all-dev is not installed. pbuilder-satisfydepends-dummy depends on python3-matplotlib; however: Package python3-matplotlib is not installed. pbuilder-satisfydepends-dummy depends on python3-pytest; however: Package python3-pytest is not installed. pbuilder-satisfydepends-dummy depends on python3-tk; however: Package python3-tk is not installed. pbuilder-satisfydepends-dummy depends on qtbase5-dev; however: Package qtbase5-dev is not installed. pbuilder-satisfydepends-dummy depends on doxygen; however: Package doxygen is not installed. pbuilder-satisfydepends-dummy depends on graphviz; however: Package graphviz is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} blt{a} bsdmainutils{a} cmake{a} cmake-data{a} cython3{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} doxygen{a} dwz{a} file{a} fontconfig{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-lyx{a} gettext{a} gettext-base{a} graphviz{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libarchive13{a} libavahi-client3{a} libavahi-common-data{a} libavahi-common3{a} libblas3{a} libboost-atomic1.67-dev{a} libboost-atomic1.67.0{a} libboost-chrono-dev{a} libboost-chrono1.67-dev{a} libboost-chrono1.67.0{a} libboost-date-time1.67-dev{a} libboost-date-time1.67.0{a} libboost-dev{a} libboost-filesystem-dev{a} libboost-filesystem1.67-dev{a} libboost-filesystem1.67.0{a} libboost-program-options-dev{a} libboost-program-options1.67-dev{a} libboost-program-options1.67.0{a} libboost-serialization1.67-dev{a} libboost-serialization1.67.0{a} libboost-system-dev{a} libboost-system1.67-dev{a} libboost-test-dev{a} libboost-test1.67-dev{a} libboost-test1.67.0{a} libboost-thread-dev{a} libboost-thread1.67-dev{a} libboost-thread1.67.0{a} libboost-timer-dev{a} libboost-timer1.67-dev{a} libboost-timer1.67.0{a} libboost1.67-dev{a} libbsd0{a} libcairo2{a} libcdt5{a} libcgal-dev{a} libcgal-qt5-13{a} libcgal-qt5-dev{a} libcgal13{a} libcgraph6{a} libclang1-6.0{a} libcroco3{a} libcups2{a} libcurl4{a} libdatrie1{a} libdbus-1-3{a} libdouble-conversion1{a} libdrm-amdgpu1{a} libdrm-common{a} libdrm-dev{a} libdrm-intel1{a} libdrm-nouveau2{a} libdrm-radeon1{a} libdrm2{a} libedit2{a} libegl-mesa0{a} libegl1{a} libeigen3-dev{a} libelf1{a} libevdev2{a} libexpat1{a} libexpat1-dev{a} libfile-stripnondeterminism-perl{a} libfontconfig1{a} libfreetype6{a} libfribidi0{a} libgbm1{a} libgd3{a} libgfortran5{a} libgl1{a} libgl1-mesa-dev{a} libgl1-mesa-dri{a} libglapi-mesa{a} libgles1{a} libgles2{a} libglib2.0-0{a} libglu1-mesa{a} libglu1-mesa-dev{a} libglvnd-core-dev{a} libglvnd-dev{a} libglvnd0{a} libglx-mesa0{a} libglx0{a} libgmp-dev{a} libgmpxx4ldbl{a} libgraphite2-3{a} libgssapi-krb5-2{a} libgts-0.7-5{a} libgudev-1.0-0{a} libgvc6{a} libgvpr2{a} libharfbuzz0b{a} libice-dev{a} libice6{a} libicu63{a} libinput-bin{a} libinput10{a} libjbig0{a} libjpeg62-turbo{a} libjs-jquery{a} libjs-jquery-ui{a} libjsoncpp1{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} liblab-gamut1{a} liblapack3{a} libldap-2.4-2{a} libldap-common{a} libllvm6.0{a} libllvm7{a} libltdl7{a} libmagic-mgc{a} libmagic1{a} libmpdec2{a} libmpfr-dev{a} libmtdev1{a} libncurses6{a} libnghttp2-14{a} libopengl0{a} libpango-1.0-0{a} libpangocairo-1.0-0{a} libpangoft2-1.0-0{a} libpathplan4{a} libpciaccess0{a} libpcre2-16-0{a} libpipeline1{a} libpixman-1-0{a} libpng16-16{a} libprocps7{a} libpsl5{a} libpthread-stubs0-dev{a} libpython3-all-dev{a} libpython3-dev{a} libpython3-stdlib{a} libpython3.7{a} libpython3.7-dev{a} libpython3.7-minimal{a} libpython3.7-stdlib{a} libqglviewer-dev-qt5{a} libqglviewer-headers{a} libqglviewer2-qt5{a} libqt5concurrent5{a} libqt5core5a{a} libqt5dbus5{a} libqt5gui5{a} libqt5network5{a} libqt5opengl5{a} libqt5opengl5-dev{a} libqt5printsupport5{a} libqt5sql5{a} libqt5svg5{a} libqt5test5{a} libqt5widgets5{a} libqt5xml5{a} libreadline7{a} librhash0{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libsensors-config{a} libsensors5{a} libsigsegv2{a} libsm-dev{a} libsm6{a} libssh2-1{a} libssl1.1{a} libtbb-dev{a} libtbb2{a} libtcl8.6{a} libthai-data{a} libthai0{a} libtiff5{a} libtk8.6{a} libtool{a} libuchardet0{a} libuv1{a} libvulkan-dev{a} libvulkan1{a} libwacom-common{a} libwacom2{a} libwayland-client0{a} libwayland-server0{a} libwebp6{a} libx11-6{a} libx11-data{a} libx11-dev{a} libx11-xcb-dev{a} libx11-xcb1{a} libxau-dev{a} libxau6{a} libxaw7{a} libxcb-dri2-0{a} libxcb-dri2-0-dev{a} libxcb-dri3-0{a} libxcb-dri3-dev{a} libxcb-glx0{a} libxcb-glx0-dev{a} libxcb-icccm4{a} libxcb-image0{a} libxcb-keysyms1{a} libxcb-present-dev{a} libxcb-present0{a} libxcb-randr0{a} libxcb-randr0-dev{a} libxcb-render-util0{a} libxcb-render0{a} libxcb-render0-dev{a} libxcb-shape0{a} libxcb-shape0-dev{a} libxcb-shm0{a} libxcb-sync-dev{a} libxcb-sync1{a} libxcb-util0{a} libxcb-xfixes0{a} libxcb-xfixes0-dev{a} libxcb-xinerama0{a} libxcb-xkb1{a} libxcb1{a} libxcb1-dev{a} libxdamage-dev{a} libxdamage1{a} libxdmcp-dev{a} libxdmcp6{a} libxdot4{a} libxext-dev{a} libxext6{a} libxfixes-dev{a} libxfixes3{a} libxft2{a} libxi6{a} libxkbcommon-x11-0{a} libxkbcommon0{a} libxml2{a} libxmu-dev{a} libxmu-headers{a} libxmu6{a} libxpm4{a} libxrender1{a} libxshmfence-dev{a} libxshmfence1{a} libxss1{a} libxt-dev{a} libxt6{a} libxxf86vm-dev{a} libxxf86vm1{a} lsb-base{a} m4{a} man-db{a} mesa-common-dev{a} mime-support{a} pkg-config{a} po-debconf{a} procps{a} python-matplotlib-data{a} python3{a} python3-all{a} python3-all-dev{a} python3-atomicwrites{a} python3-attr{a} python3-cycler{a} python3-dateutil{a} python3-dev{a} python3-distutils{a} python3-kiwisolver{a} python3-lib2to3{a} python3-matplotlib{a} python3-minimal{a} python3-more-itertools{a} python3-numpy{a} python3-pkg-resources{a} python3-pluggy{a} python3-py{a} python3-pyparsing{a} python3-pytest{a} python3-six{a} python3-tk{a} python3.7{a} python3.7-dev{a} python3.7-minimal{a} qt5-qmake{a} qt5-qmake-bin{a} qtbase5-dev{a} qtbase5-dev-tools{a} qtchooser{a} readline-common{a} sensible-utils{a} tk8.6-blt2.5{a} ttf-bitstream-vera{a} ucf{a} x11-common{a} x11proto-core-dev{a} x11proto-damage-dev{a} x11proto-dev{a} x11proto-fixes-dev{a} x11proto-xext-dev{a} x11proto-xf86vidmode-dev{a} xkb-data{a} xorg-sgml-doctools{a} xtrans-dev{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl dbus fonts-liberation javascript-common krb5-locales libarchive-cpio-perl libglib2.0-data libgpm2 libgts-bin libltdl-dev libmail-sendmail-perl libqt5sql5-ibase libqt5sql5-mysql libqt5sql5-odbc libqt5sql5-psql libqt5sql5-sqlite libqt5sql5-tds libsasl2-modules libwacom-bin lynx psmisc publicsuffix python3-pil qt5-gtk-platformtheme qttranslations5-l10n shared-mime-info wget xdg-user-dirs 0 packages upgraded, 329 newly installed, 0 to remove and 0 not upgraded. Need to get 213 MB of archives. After unpacking 992 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian buster/main i386 libbsd0 i386 0.9.1-2 [104 kB] Get: 2 http://deb.debian.org/debian buster/main i386 bsdmainutils i386 11.1.2+b1 [193 kB] Get: 3 http://deb.debian.org/debian buster/main i386 libuchardet0 i386 0.0.6-3 [65.2 kB] Get: 4 http://deb.debian.org/debian buster/main i386 groff-base i386 1.22.4-3 [935 kB] Get: 5 http://deb.debian.org/debian buster/main i386 libpipeline1 i386 1.5.1-2 [33.3 kB] Get: 6 http://deb.debian.org/debian buster/main i386 man-db i386 2.8.5-2 [1284 kB] Get: 7 http://deb.debian.org/debian buster/main i386 libdouble-conversion1 i386 3.1.0-3 [43.3 kB] Get: 8 http://deb.debian.org/debian buster/main i386 libglib2.0-0 i386 2.58.3-2+deb10u2 [1334 kB] Get: 9 http://deb.debian.org/debian buster/main i386 libicu63 i386 63.1-6+deb10u1 [8451 kB] Get: 10 http://deb.debian.org/debian buster/main i386 libpcre2-16-0 i386 10.32-5 [203 kB] Get: 11 http://deb.debian.org/debian buster/main i386 libqt5core5a i386 5.11.3+dfsg1-1+deb10u3 [2510 kB] Get: 12 http://deb.debian.org/debian buster/main i386 libexpat1 i386 2.2.6-2+deb10u1 [104 kB] Get: 13 http://deb.debian.org/debian buster/main i386 libpng16-16 i386 1.6.36-6 [301 kB] Get: 14 http://deb.debian.org/debian buster/main i386 libfreetype6 i386 2.9.1-3+deb10u1 [395 kB] Get: 15 http://deb.debian.org/debian buster/main i386 sensible-utils all 0.0.12 [15.8 kB] Get: 16 http://deb.debian.org/debian buster/main i386 ucf all 3.0038+nmu1 [69.0 kB] Get: 17 http://deb.debian.org/debian buster/main i386 fonts-dejavu-core all 2.37-1 [1068 kB] Get: 18 http://deb.debian.org/debian buster/main i386 ttf-bitstream-vera all 1.10-8 [352 kB] Get: 19 http://deb.debian.org/debian buster/main i386 fontconfig-config all 2.13.1-2 [280 kB] Get: 20 http://deb.debian.org/debian buster/main i386 libfontconfig1 i386 2.13.1-2 [357 kB] Get: 21 http://deb.debian.org/debian buster/main i386 fontconfig i386 2.13.1-2 [405 kB] Get: 22 http://deb.debian.org/debian buster/main i386 libdrm-common all 2.4.97-1 [13.8 kB] Get: 23 http://deb.debian.org/debian buster/main i386 libdrm2 i386 2.4.97-1 [42.5 kB] Get: 24 http://deb.debian.org/debian buster/main i386 libglvnd0 i386 1.1.0-1 [41.9 kB] Get: 25 http://deb.debian.org/debian buster/main i386 libwayland-server0 i386 1.16.0-1 [33.7 kB] Get: 26 http://deb.debian.org/debian buster/main i386 libgbm1 i386 18.3.6-2+deb10u1 [69.5 kB] Get: 27 http://deb.debian.org/debian buster/main i386 libglapi-mesa i386 18.3.6-2+deb10u1 [66.9 kB] Get: 28 http://deb.debian.org/debian buster/main i386 libwayland-client0 i386 1.16.0-1 [27.0 kB] Get: 29 http://deb.debian.org/debian buster/main i386 libx11-xcb1 i386 2:1.6.7-1 [190 kB] Get: 30 http://deb.debian.org/debian buster/main i386 libxau6 i386 1:1.0.8-1+b2 [20.3 kB] Get: 31 http://deb.debian.org/debian buster/main i386 libxdmcp6 i386 1:1.1.2-3 [26.7 kB] Get: 32 http://deb.debian.org/debian buster/main i386 libxcb1 i386 1.13.1-2 [141 kB] Get: 33 http://deb.debian.org/debian buster/main i386 libxcb-dri2-0 i386 1.13.1-2 [101 kB] Get: 34 http://deb.debian.org/debian buster/main i386 libxcb-dri3-0 i386 1.13.1-2 [101 kB] Get: 35 http://deb.debian.org/debian buster/main i386 libxcb-present0 i386 1.13.1-2 [99.4 kB] Get: 36 http://deb.debian.org/debian buster/main i386 libxcb-sync1 i386 1.13.1-2 [103 kB] Get: 37 http://deb.debian.org/debian buster/main i386 libxcb-xfixes0 i386 1.13.1-2 [103 kB] Get: 38 http://deb.debian.org/debian buster/main i386 libxshmfence1 i386 1.3-1 [8976 B] Get: 39 http://deb.debian.org/debian buster/main i386 libegl-mesa0 i386 18.3.6-2+deb10u1 [143 kB] Get: 40 http://deb.debian.org/debian buster/main i386 libegl1 i386 1.1.0-1 [35.3 kB] Get: 41 http://deb.debian.org/debian buster/main i386 libx11-data all 2:1.6.7-1 [298 kB] Get: 42 http://deb.debian.org/debian buster/main i386 libx11-6 i386 2:1.6.7-1 [778 kB] Get: 43 http://deb.debian.org/debian buster/main i386 libxext6 i386 2:1.3.3-1+b2 [55.2 kB] Get: 44 http://deb.debian.org/debian buster/main i386 libxcb-glx0 i386 1.13.1-2 [117 kB] Get: 45 http://deb.debian.org/debian buster/main i386 libxfixes3 i386 1:5.0.3-1 [22.4 kB] Get: 46 http://deb.debian.org/debian buster/main i386 libxdamage1 i386 1:1.1.4-3+b3 [15.0 kB] Get: 47 http://deb.debian.org/debian buster/main i386 libxxf86vm1 i386 1:1.1.4-1+b2 [21.7 kB] Get: 48 http://deb.debian.org/debian buster/main i386 libdrm-amdgpu1 i386 2.4.97-1 [30.1 kB] Get: 49 http://deb.debian.org/debian buster/main i386 libpciaccess0 i386 0.14-1 [55.7 kB] Get: 50 http://deb.debian.org/debian buster/main i386 libdrm-intel1 i386 2.4.97-1 [72.9 kB] Get: 51 http://deb.debian.org/debian buster/main i386 libdrm-nouveau2 i386 2.4.97-1 [28.0 kB] Get: 52 http://deb.debian.org/debian buster/main i386 libdrm-radeon1 i386 2.4.97-1 [32.5 kB] Get: 53 http://deb.debian.org/debian buster/main i386 libelf1 i386 0.176-1.1 [166 kB] Get: 54 http://deb.debian.org/debian buster/main i386 libedit2 i386 3.1-20181209-1 [98.2 kB] Get: 55 http://deb.debian.org/debian buster/main i386 libllvm7 i386 1:7.0.1-8 [13.0 MB] Get: 56 http://deb.debian.org/debian buster/main i386 libsensors-config all 1:3.5.0-3 [31.6 kB] Get: 57 http://deb.debian.org/debian buster/main i386 libsensors5 i386 1:3.5.0-3 [53.5 kB] Get: 58 http://deb.debian.org/debian buster/main i386 libgl1-mesa-dri i386 18.3.6-2+deb10u1 [7102 kB] Get: 59 http://deb.debian.org/debian buster/main i386 libglx-mesa0 i386 18.3.6-2+deb10u1 [187 kB] Get: 60 http://deb.debian.org/debian buster/main i386 libglx0 i386 1.1.0-1 [31.3 kB] Get: 61 http://deb.debian.org/debian buster/main i386 libgl1 i386 1.1.0-1 [83.1 kB] Get: 62 http://deb.debian.org/debian buster/main i386 libgraphite2-3 i386 1.3.13-7 [84.0 kB] Get: 63 http://deb.debian.org/debian buster/main i386 libharfbuzz0b i386 2.3.1-1 [1209 kB] Get: 64 http://deb.debian.org/debian buster/main i386 lsb-base all 10.2019051400 [28.4 kB] Get: 65 http://deb.debian.org/debian buster/main i386 x11-common all 1:7.7+19 [251 kB] Get: 66 http://deb.debian.org/debian buster/main i386 libice6 i386 2:1.0.9-2 [61.1 kB] Get: 67 http://deb.debian.org/debian buster/main i386 libevdev2 i386 1.6.0+dfsg-1 [29.8 kB] Get: 68 http://deb.debian.org/debian buster/main i386 libmtdev1 i386 1.1.5-1+b1 [22.9 kB] Get: 69 http://deb.debian.org/debian buster/main i386 libgudev-1.0-0 i386 232-2 [14.2 kB] Get: 70 http://deb.debian.org/debian buster/main i386 libwacom-common all 0.32-1 [39.1 kB] Get: 71 http://deb.debian.org/debian buster/main i386 libwacom2 i386 0.32-1 [20.0 kB] Get: 72 http://deb.debian.org/debian buster/main i386 libinput-bin i386 1.12.6-2+deb10u1 [17.0 kB] Get: 73 http://deb.debian.org/debian buster/main i386 libinput10 i386 1.12.6-2+deb10u1 [118 kB] Get: 74 http://deb.debian.org/debian buster/main i386 libjpeg62-turbo i386 1:1.5.2-2+b1 [142 kB] Get: 75 http://deb.debian.org/debian buster/main i386 libdbus-1-3 i386 1.12.20-0+deb10u1 [227 kB] Get: 76 http://deb.debian.org/debian buster/main i386 libqt5dbus5 i386 5.11.3+dfsg1-1+deb10u3 [258 kB] Get: 77 http://deb.debian.org/debian buster/main i386 libssl1.1 i386 1.1.1d-0+deb10u3 [1537 kB] Get: 78 http://deb.debian.org/debian buster/main i386 libqt5network5 i386 5.11.3+dfsg1-1+deb10u3 [763 kB] Get: 79 http://deb.debian.org/debian buster/main i386 libsm6 i386 2:1.2.3-1 [35.7 kB] Get: 80 http://deb.debian.org/debian buster/main i386 libxcb-icccm4 i386 0.4.1-1.1 [28.1 kB] Get: 81 http://deb.debian.org/debian buster/main i386 libxcb-shm0 i386 1.13.1-2 [99.4 kB] Get: 82 http://deb.debian.org/debian buster/main i386 libxcb-util0 i386 0.3.8-3+b2 [23.3 kB] Get: 83 http://deb.debian.org/debian buster/main i386 libxcb-image0 i386 0.4.0-1+b2 [24.8 kB] Get: 84 http://deb.debian.org/debian buster/main i386 libxcb-keysyms1 i386 0.4.0-1+b2 [16.7 kB] Get: 85 http://deb.debian.org/debian buster/main i386 libxcb-randr0 i386 1.13.1-2 [112 kB] Get: 86 http://deb.debian.org/debian buster/main i386 libxcb-render0 i386 1.13.1-2 [110 kB] Get: 87 http://deb.debian.org/debian buster/main i386 libxcb-render-util0 i386 0.3.9-1+b1 [18.7 kB] Get: 88 http://deb.debian.org/debian buster/main i386 libxcb-shape0 i386 1.13.1-2 [99.7 kB] Get: 89 http://deb.debian.org/debian buster/main i386 libxcb-xinerama0 i386 1.13.1-2 [99.0 kB] Get: 90 http://deb.debian.org/debian buster/main i386 libxcb-xkb1 i386 1.13.1-2 [126 kB] Get: 91 http://deb.debian.org/debian buster/main i386 libxi6 i386 2:1.7.9-1 [85.2 kB] Get: 92 http://deb.debian.org/debian buster/main i386 xkb-data all 2.26-2 [681 kB] Get: 93 http://deb.debian.org/debian buster/main i386 libxkbcommon0 i386 0.8.2-1 [128 kB] Get: 94 http://deb.debian.org/debian buster/main i386 libxkbcommon-x11-0 i386 0.8.2-1 [40.5 kB] Get: 95 http://deb.debian.org/debian buster/main i386 libxrender1 i386 1:0.9.10-1 [34.1 kB] Get: 96 http://deb.debian.org/debian buster/main i386 libqt5gui5 i386 5.11.3+dfsg1-1+deb10u3 [4844 kB] Get: 97 http://deb.debian.org/debian buster/main i386 libqt5widgets5 i386 5.11.3+dfsg1-1+deb10u3 [2537 kB] Get: 98 http://deb.debian.org/debian buster/main i386 libqt5svg5 i386 5.11.3-2 [146 kB] Get: 99 http://deb.debian.org/debian buster/main i386 libpython3.7-minimal i386 3.7.3-2+deb10u2 [590 kB] Get: 100 http://deb.debian.org/debian buster/main i386 python3.7-minimal i386 3.7.3-2+deb10u2 [1746 kB] Get: 101 http://deb.debian.org/debian buster/main i386 python3-minimal i386 3.7.3-1 [36.6 kB] Get: 102 http://deb.debian.org/debian buster/main i386 mime-support all 3.62 [37.2 kB] Get: 103 http://deb.debian.org/debian buster/main i386 libmpdec2 i386 2.4.2-2 [83.2 kB] Get: 104 http://deb.debian.org/debian buster/main i386 readline-common all 7.0-5 [70.6 kB] Get: 105 http://deb.debian.org/debian buster/main i386 libreadline7 i386 7.0-5 [156 kB] Get: 106 http://deb.debian.org/debian buster/main i386 libpython3.7-stdlib i386 3.7.3-2+deb10u2 [1751 kB] Get: 107 http://deb.debian.org/debian buster/main i386 python3.7 i386 3.7.3-2+deb10u2 [330 kB] Get: 108 http://deb.debian.org/debian buster/main i386 libpython3-stdlib i386 3.7.3-1 [20.0 kB] Get: 109 http://deb.debian.org/debian buster/main i386 python3 i386 3.7.3-1 [61.5 kB] Get: 110 http://deb.debian.org/debian buster/main i386 libncurses6 i386 6.1+20181013-2+deb10u2 [109 kB] Get: 111 http://deb.debian.org/debian buster/main i386 libprocps7 i386 2:3.3.15-2 [62.7 kB] Get: 112 http://deb.debian.org/debian buster/main i386 procps i386 2:3.3.15-2 [259 kB] Get: 113 http://deb.debian.org/debian buster/main i386 libmagic-mgc i386 1:5.35-4+deb10u1 [242 kB] Get: 114 http://deb.debian.org/debian buster/main i386 libmagic1 i386 1:5.35-4+deb10u1 [124 kB] Get: 115 http://deb.debian.org/debian buster/main i386 file i386 1:5.35-4+deb10u1 [66.3 kB] Get: 116 http://deb.debian.org/debian buster/main i386 gettext-base i386 0.19.8.1-9 [124 kB] Get: 117 http://deb.debian.org/debian buster/main i386 libsigsegv2 i386 2.12-2 [33.2 kB] Get: 118 http://deb.debian.org/debian buster/main i386 m4 i386 1.4.18-2 [205 kB] Get: 119 http://deb.debian.org/debian buster/main i386 autoconf all 2.69-11 [341 kB] Get: 120 http://deb.debian.org/debian buster/main i386 autotools-dev all 20180224.1 [77.0 kB] Get: 121 http://deb.debian.org/debian buster/main i386 automake all 1:1.16.1-4 [771 kB] Get: 122 http://deb.debian.org/debian buster/main i386 autopoint all 0.19.8.1-9 [434 kB] Get: 123 http://deb.debian.org/debian buster/main i386 libtcl8.6 i386 8.6.9+dfsg-2 [1065 kB] Get: 124 http://deb.debian.org/debian buster/main i386 libxft2 i386 2.3.2-2 [58.2 kB] Get: 125 http://deb.debian.org/debian buster/main i386 libxss1 i386 1:1.2.3-1 [18.1 kB] Get: 126 http://deb.debian.org/debian buster/main i386 libtk8.6 i386 8.6.9-2 [809 kB] Get: 127 http://deb.debian.org/debian buster/main i386 tk8.6-blt2.5 i386 2.5.3+dfsg-4 [613 kB] Get: 128 http://deb.debian.org/debian buster/main i386 blt i386 2.5.3+dfsg-4 [14.8 kB] Get: 129 http://deb.debian.org/debian buster/main i386 cmake-data all 3.13.4-1 [1476 kB] Get: 130 http://deb.debian.org/debian buster/main i386 libxml2 i386 2.9.4+dfsg1-7+b3 [721 kB] Get: 131 http://deb.debian.org/debian buster/main i386 libarchive13 i386 3.3.3-4+deb10u1 [351 kB] Get: 132 http://deb.debian.org/debian buster/main i386 libkeyutils1 i386 1.6-6 [15.4 kB] Get: 133 http://deb.debian.org/debian buster/main i386 libkrb5support0 i386 1.17-3 [68.6 kB] Get: 134 http://deb.debian.org/debian buster/main i386 libk5crypto3 i386 1.17-3 [126 kB] Get: 135 http://deb.debian.org/debian buster/main i386 libkrb5-3 i386 1.17-3 [396 kB] Get: 136 http://deb.debian.org/debian buster/main i386 libgssapi-krb5-2 i386 1.17-3 [168 kB] Get: 137 http://deb.debian.org/debian buster/main i386 libsasl2-modules-db i386 2.1.27+dfsg-1+deb10u1 [70.1 kB] Get: 138 http://deb.debian.org/debian buster/main i386 libsasl2-2 i386 2.1.27+dfsg-1+deb10u1 [110 kB] Get: 139 http://deb.debian.org/debian buster/main i386 libldap-common all 2.4.47+dfsg-3+deb10u2 [89.7 kB] Get: 140 http://deb.debian.org/debian buster/main i386 libldap-2.4-2 i386 2.4.47+dfsg-3+deb10u2 [236 kB] Get: 141 http://deb.debian.org/debian buster/main i386 libnghttp2-14 i386 1.36.0-2+deb10u1 [90.3 kB] Get: 142 http://deb.debian.org/debian buster/main i386 libpsl5 i386 0.20.2-2 [54.4 kB] Get: 143 http://deb.debian.org/debian buster/main i386 librtmp1 i386 2.4+20151223.gitfa8646d.1-2 [64.2 kB] Get: 144 http://deb.debian.org/debian buster/main i386 libssh2-1 i386 1.8.0-2.1 [147 kB] Get: 145 http://deb.debian.org/debian buster/main i386 libcurl4 i386 7.64.0-4+deb10u1 [358 kB] Get: 146 http://deb.debian.org/debian buster/main i386 libjsoncpp1 i386 1.7.4-3 [85.0 kB] Get: 147 http://deb.debian.org/debian buster/main i386 librhash0 i386 1.3.8-1 [135 kB] Get: 148 http://deb.debian.org/debian buster/main i386 libuv1 i386 1.24.1-1 [116 kB] Get: 149 http://deb.debian.org/debian buster/main i386 cmake i386 3.13.4-1 [3747 kB] Get: 150 http://deb.debian.org/debian buster/main i386 cython3 i386 0.29.2-2 [1297 kB] Get: 151 http://deb.debian.org/debian buster/main i386 libtool all 2.4.6-9 [547 kB] Get: 152 http://deb.debian.org/debian buster/main i386 dh-autoreconf all 19 [16.9 kB] Get: 153 http://deb.debian.org/debian buster/main i386 libarchive-zip-perl all 1.64-1 [96.8 kB] Get: 154 http://deb.debian.org/debian buster/main i386 libfile-stripnondeterminism-perl all 1.1.2-1 [19.8 kB] Get: 155 http://deb.debian.org/debian buster/main i386 dh-strip-nondeterminism all 1.1.2-1 [13.0 kB] Get: 156 http://deb.debian.org/debian buster/main i386 dwz i386 0.12-3 [81.4 kB] Get: 157 http://deb.debian.org/debian buster/main i386 libcroco3 i386 0.6.12-3 [151 kB] Get: 158 http://deb.debian.org/debian buster/main i386 gettext i386 0.19.8.1-9 [1314 kB] Get: 159 http://deb.debian.org/debian buster/main i386 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get: 160 http://deb.debian.org/debian buster/main i386 po-debconf all 1.0.21 [248 kB] Get: 161 http://deb.debian.org/debian buster/main i386 debhelper all 12.1.1 [1016 kB] Get: 162 http://deb.debian.org/debian buster/main i386 python3-lib2to3 all 3.7.3-1 [76.7 kB] Get: 163 http://deb.debian.org/debian buster/main i386 python3-distutils all 3.7.3-1 [142 kB] Get: 164 http://deb.debian.org/debian buster/main i386 dh-python all 3.20190308 [99.3 kB] Get: 165 http://deb.debian.org/debian buster/main i386 libllvm6.0 i386 1:6.0.1-10 [16.4 MB] Get: 166 http://deb.debian.org/debian buster/main i386 libclang1-6.0 i386 1:6.0.1-10 [7959 kB] Get: 167 http://deb.debian.org/debian buster/main i386 doxygen i386 1.8.13-10 [4004 kB] Get: 168 http://deb.debian.org/debian buster/main i386 fonts-lyx all 2.3.2-1 [199 kB] Get: 169 http://deb.debian.org/debian buster/main i386 libpixman-1-0 i386 0.36.0-1 [541 kB] Get: 170 http://deb.debian.org/debian buster/main i386 libcairo2 i386 1.16.0-4 [744 kB] Get: 171 http://deb.debian.org/debian buster/main i386 libcdt5 i386 2.40.1-6 [61.0 kB] Get: 172 http://deb.debian.org/debian buster/main i386 libcgraph6 i386 2.40.1-6 [88.1 kB] Get: 173 http://deb.debian.org/debian buster/main i386 libjbig0 i386 2.1-3.1+b2 [31.5 kB] Get: 174 http://deb.debian.org/debian buster/main i386 libwebp6 i386 0.6.1-2 [275 kB] Get: 175 http://deb.debian.org/debian buster/main i386 libtiff5 i386 4.1.0+git191117-2~deb10u1 [284 kB] Get: 176 http://deb.debian.org/debian buster/main i386 libxpm4 i386 1:3.5.12-1 [50.9 kB] Get: 177 http://deb.debian.org/debian buster/main i386 libgd3 i386 2.2.5-5.2 [141 kB] Get: 178 http://deb.debian.org/debian buster/main i386 libgts-0.7-5 i386 0.7.6+darcs121130-4 [161 kB] Get: 179 http://deb.debian.org/debian buster/main i386 libltdl7 i386 2.4.6-9 [392 kB] Get: 180 http://deb.debian.org/debian buster/main i386 libfribidi0 i386 1.0.5-3.1+deb10u1 [64.3 kB] Get: 181 http://deb.debian.org/debian buster/main i386 libthai-data all 0.1.28-2 [170 kB] Get: 182 http://deb.debian.org/debian buster/main i386 libdatrie1 i386 0.2.12-2 [40.7 kB] Get: 183 http://deb.debian.org/debian buster/main i386 libthai0 i386 0.1.28-2 [55.2 kB] Get: 184 http://deb.debian.org/debian buster/main i386 libpango-1.0-0 i386 1.42.4-8~deb10u1 [192 kB] Get: 185 http://deb.debian.org/debian buster/main i386 libpangoft2-1.0-0 i386 1.42.4-8~deb10u1 [71.3 kB] Get: 186 http://deb.debian.org/debian buster/main i386 libpangocairo-1.0-0 i386 1.42.4-8~deb10u1 [57.5 kB] Get: 187 http://deb.debian.org/debian buster/main i386 libpathplan4 i386 2.40.1-6 [64.0 kB] Get: 188 http://deb.debian.org/debian buster/main i386 libxdot4 i386 2.40.1-6 [57.9 kB] Get: 189 http://deb.debian.org/debian buster/main i386 libgvc6 i386 2.40.1-6 [676 kB] Get: 190 http://deb.debian.org/debian buster/main i386 libgvpr2 i386 2.40.1-6 [223 kB] Get: 191 http://deb.debian.org/debian buster/main i386 liblab-gamut1 i386 2.40.1-6 [220 kB] Get: 192 http://deb.debian.org/debian buster/main i386 libxt6 i386 1:1.1.5-1+b3 [195 kB] Get: 193 http://deb.debian.org/debian buster/main i386 libxmu6 i386 2:1.1.2-2+b3 [62.8 kB] Get: 194 http://deb.debian.org/debian buster/main i386 libxaw7 i386 2:1.0.13-1+b2 [209 kB] Get: 195 http://deb.debian.org/debian buster/main i386 graphviz i386 2.40.1-6 [595 kB] Get: 196 http://deb.debian.org/debian buster/main i386 libavahi-common-data i386 0.7-4+b1 [122 kB] Get: 197 http://deb.debian.org/debian buster/main i386 libavahi-common3 i386 0.7-4+b1 [56.2 kB] Get: 198 http://deb.debian.org/debian buster/main i386 libavahi-client3 i386 0.7-4+b1 [60.1 kB] Get: 199 http://deb.debian.org/debian buster/main i386 libgfortran5 i386 8.3.0-6 [549 kB] Get: 200 http://deb.debian.org/debian buster/main i386 libblas3 i386 3.8.0-2 [142 kB] Get: 201 http://deb.debian.org/debian buster/main i386 libboost1.67-dev i386 1.67.0-13+deb10u1 [8388 kB] Get: 202 http://deb.debian.org/debian buster/main i386 libboost-atomic1.67.0 i386 1.67.0-13+deb10u1 [226 kB] Get: 203 http://deb.debian.org/debian buster/main i386 libboost-atomic1.67-dev i386 1.67.0-13+deb10u1 [225 kB] Get: 204 http://deb.debian.org/debian buster/main i386 libboost-chrono1.67.0 i386 1.67.0-13+deb10u1 [235 kB] Get: 205 http://deb.debian.org/debian buster/main i386 libboost-chrono1.67-dev i386 1.67.0-13+deb10u1 [238 kB] Get: 206 http://deb.debian.org/debian buster/main i386 libboost-chrono-dev i386 1.67.0.1 [4268 B] Get: 207 http://deb.debian.org/debian buster/main i386 libboost-date-time1.67.0 i386 1.67.0-13+deb10u1 [239 kB] Get: 208 http://deb.debian.org/debian buster/main i386 libboost-serialization1.67.0 i386 1.67.0-13+deb10u1 [325 kB] Get: 209 http://deb.debian.org/debian buster/main i386 libboost-serialization1.67-dev i386 1.67.0-13+deb10u1 [367 kB] Get: 210 http://deb.debian.org/debian buster/main i386 libboost-date-time1.67-dev i386 1.67.0-13+deb10u1 [248 kB] Get: 211 http://deb.debian.org/debian buster/main i386 libboost-dev i386 1.67.0.1 [3864 B] Get: 212 http://deb.debian.org/debian buster/main i386 libboost-filesystem1.67.0 i386 1.67.0-13+deb10u1 [265 kB] Get: 213 http://deb.debian.org/debian buster/main i386 libboost-system1.67-dev i386 1.67.0-13+deb10u1 [232 kB] Get: 214 http://deb.debian.org/debian buster/main i386 libboost-filesystem1.67-dev i386 1.67.0-13+deb10u1 [274 kB] Get: 215 http://deb.debian.org/debian buster/main i386 libboost-filesystem-dev i386 1.67.0.1 [3684 B] Get: 216 http://deb.debian.org/debian buster/main i386 libboost-program-options1.67.0 i386 1.67.0-13+deb10u1 [365 kB] Get: 217 http://deb.debian.org/debian buster/main i386 libboost-program-options1.67-dev i386 1.67.0-13+deb10u1 [395 kB] Get: 218 http://deb.debian.org/debian buster/main i386 libboost-program-options-dev i386 1.67.0.1 [3660 B] Get: 219 http://deb.debian.org/debian buster/main i386 libboost-system-dev i386 1.67.0.1 [3788 B] Get: 220 http://deb.debian.org/debian buster/main i386 libboost-timer1.67.0 i386 1.67.0-13+deb10u1 [232 kB] Get: 221 http://deb.debian.org/debian buster/main i386 libboost-test1.67.0 i386 1.67.0-13+deb10u1 [471 kB] Get: 222 http://deb.debian.org/debian buster/main i386 libboost-test1.67-dev i386 1.67.0-13+deb10u1 [525 kB] Get: 223 http://deb.debian.org/debian buster/main i386 libboost-test-dev i386 1.67.0.1 [3684 B] Get: 224 http://deb.debian.org/debian buster/main i386 libboost-thread1.67.0 i386 1.67.0-13+deb10u1 [270 kB] Get: 225 http://deb.debian.org/debian buster/main i386 libboost-thread1.67-dev i386 1.67.0-13+deb10u1 [273 kB] Get: 226 http://deb.debian.org/debian buster/main i386 libboost-thread-dev i386 1.67.0.1 [3672 B] Get: 227 http://deb.debian.org/debian buster/main i386 libboost-timer1.67-dev i386 1.67.0-13+deb10u1 [232 kB] Get: 228 http://deb.debian.org/debian buster/main i386 libboost-timer-dev i386 1.67.0.1 [3772 B] Get: 229 http://deb.debian.org/debian buster/main i386 libcgal13 i386 4.13-1+b2 [345 kB] Get: 230 http://deb.debian.org/debian buster/main i386 libgmpxx4ldbl i386 2:6.1.2+dfsg-4 [23.2 kB] Get: 231 http://deb.debian.org/debian buster/main i386 libgmp-dev i386 2:6.1.2+dfsg-4 [648 kB] Get: 232 http://deb.debian.org/debian buster/main i386 libmpfr-dev i386 4.0.2-1 [254 kB] Get: 233 http://deb.debian.org/debian buster/main i386 zlib1g-dev i386 1:1.2.11.dfsg-1 [216 kB] Get: 234 http://deb.debian.org/debian buster/main i386 libcgal-dev i386 4.13-1+b2 [4467 kB] Get: 235 http://deb.debian.org/debian buster/main i386 libqt5opengl5 i386 5.11.3+dfsg1-1+deb10u3 [173 kB] Get: 236 http://deb.debian.org/debian buster/main i386 libqt5xml5 i386 5.11.3+dfsg1-1+deb10u3 [138 kB] Get: 237 http://deb.debian.org/debian buster/main i386 libcgal-qt5-13 i386 4.13-1+b2 [227 kB] Get: 238 http://deb.debian.org/debian buster/main i386 libcgal-qt5-dev i386 4.13-1+b2 [362 kB] Get: 239 http://deb.debian.org/debian buster/main i386 libcups2 i386 2.2.10-6+deb10u3 [338 kB] Get: 240 http://deb.debian.org/debian buster/main i386 libdrm-dev i386 2.4.97-1 [131 kB] Get: 241 http://deb.debian.org/debian buster/main i386 pkg-config i386 0.29-6 [64.7 kB] Get: 242 http://deb.debian.org/debian buster/main i386 libeigen3-dev all 3.3.7-1 [850 kB] Get: 243 http://deb.debian.org/debian buster/main i386 libexpat1-dev i386 2.2.6-2+deb10u1 [156 kB] Get: 244 http://deb.debian.org/debian buster/main i386 xorg-sgml-doctools all 1:1.11-1 [21.9 kB] Get: 245 http://deb.debian.org/debian buster/main i386 x11proto-dev all 2018.4-4 [251 kB] Get: 246 http://deb.debian.org/debian buster/main i386 x11proto-core-dev all 2018.4-4 [3128 B] Get: 247 http://deb.debian.org/debian buster/main i386 libxau-dev i386 1:1.0.8-1+b2 [23.6 kB] Get: 248 http://deb.debian.org/debian buster/main i386 libxdmcp-dev i386 1:1.1.2-3 [42.7 kB] Get: 249 http://deb.debian.org/debian buster/main i386 xtrans-dev all 1.3.5-1 [100 kB] Get: 250 http://deb.debian.org/debian buster/main i386 libpthread-stubs0-dev i386 0.4-1 [5340 B] Get: 251 http://deb.debian.org/debian buster/main i386 libxcb1-dev i386 1.13.1-2 [180 kB] Get: 252 http://deb.debian.org/debian buster/main i386 libx11-dev i386 2:1.6.7-1 [856 kB] Get: 253 http://deb.debian.org/debian buster/main i386 mesa-common-dev i386 18.3.6-2+deb10u1 [611 kB] Get: 254 http://deb.debian.org/debian buster/main i386 libglvnd-core-dev i386 1.1.0-1 [13.2 kB] Get: 255 http://deb.debian.org/debian buster/main i386 libgles1 i386 1.1.0-1 [13.9 kB] Get: 256 http://deb.debian.org/debian buster/main i386 libgles2 i386 1.1.0-1 [18.8 kB] Get: 257 http://deb.debian.org/debian buster/main i386 libopengl0 i386 1.1.0-1 [31.0 kB] Get: 258 http://deb.debian.org/debian buster/main i386 libglvnd-dev i386 1.1.0-1 [5128 B] Get: 259 http://deb.debian.org/debian buster/main i386 libx11-xcb-dev i386 2:1.6.7-1 [192 kB] Get: 260 http://deb.debian.org/debian buster/main i386 libxcb-dri3-dev i386 1.13.1-2 [101 kB] Get: 261 http://deb.debian.org/debian buster/main i386 libxcb-render0-dev i386 1.13.1-2 [113 kB] Get: 262 http://deb.debian.org/debian buster/main i386 libxcb-randr0-dev i386 1.13.1-2 [116 kB] Get: 263 http://deb.debian.org/debian buster/main i386 libxcb-shape0-dev i386 1.13.1-2 [101 kB] Get: 264 http://deb.debian.org/debian buster/main i386 libxcb-xfixes0-dev i386 1.13.1-2 [106 kB] Get: 265 http://deb.debian.org/debian buster/main i386 libxcb-sync-dev i386 1.13.1-2 [105 kB] Get: 266 http://deb.debian.org/debian buster/main i386 libxcb-present-dev i386 1.13.1-2 [101 kB] Get: 267 http://deb.debian.org/debian buster/main i386 libxshmfence-dev i386 1.3-1 [8560 B] Get: 268 http://deb.debian.org/debian buster/main i386 libxcb-dri2-0-dev i386 1.13.1-2 [102 kB] Get: 269 http://deb.debian.org/debian buster/main i386 libxcb-glx0-dev i386 1.13.1-2 [123 kB] Get: 270 http://deb.debian.org/debian buster/main i386 x11proto-fixes-dev all 1:2018.4-4 [3140 B] Get: 271 http://deb.debian.org/debian buster/main i386 libxfixes-dev i386 1:5.0.3-1 [24.3 kB] Get: 272 http://deb.debian.org/debian buster/main i386 x11proto-damage-dev all 1:2018.4-4 [3140 B] Get: 273 http://deb.debian.org/debian buster/main i386 libxdamage-dev i386 1:1.1.4-3+b3 [14.9 kB] Get: 274 http://deb.debian.org/debian buster/main i386 x11proto-xext-dev all 2018.4-4 [3128 B] Get: 275 http://deb.debian.org/debian buster/main i386 libxext-dev i386 2:1.3.3-1+b2 [110 kB] Get: 276 http://deb.debian.org/debian buster/main i386 x11proto-xf86vidmode-dev all 2018.4-4 [3140 B] Get: 277 http://deb.debian.org/debian buster/main i386 libxxf86vm-dev i386 1:1.1.4-1+b2 [26.3 kB] Get: 278 http://deb.debian.org/debian buster/main i386 libgl1-mesa-dev i386 18.3.6-2+deb10u1 [48.0 kB] Get: 279 http://deb.debian.org/debian buster/main i386 libglu1-mesa i386 9.0.0-2.1+b3 [179 kB] Get: 280 http://deb.debian.org/debian buster/main i386 libglu1-mesa-dev i386 9.0.0-2.1+b3 [223 kB] Get: 281 http://deb.debian.org/debian buster/main i386 libice-dev i386 2:1.0.9-2 [70.2 kB] Get: 282 http://deb.debian.org/debian buster/main i386 libjs-jquery all 3.3.1~dfsg-3 [332 kB] Get: 283 http://deb.debian.org/debian buster/main i386 libjs-jquery-ui all 1.12.1+dfsg-5 [232 kB] Get: 284 http://deb.debian.org/debian buster/main i386 liblapack3 i386 3.8.0-2 [1974 kB] Get: 285 http://deb.debian.org/debian buster/main i386 libpython3.7 i386 3.7.3-2+deb10u2 [1508 kB] Get: 286 http://deb.debian.org/debian buster/main i386 libpython3.7-dev i386 3.7.3-2+deb10u2 [47.7 MB] Get: 287 http://deb.debian.org/debian buster/main i386 libpython3-dev i386 3.7.3-1 [20.2 kB] Get: 288 http://deb.debian.org/debian buster/main i386 libpython3-all-dev i386 3.7.3-1 [1068 B] Get: 289 http://deb.debian.org/debian buster/main i386 libqglviewer2-qt5 i386 2.6.3+dfsg2-3 [229 kB] Get: 290 http://deb.debian.org/debian buster/main i386 libqglviewer-headers all 2.6.3+dfsg2-3 [53.4 kB] Get: 291 http://deb.debian.org/debian buster/main i386 libqt5concurrent5 i386 5.11.3+dfsg1-1+deb10u3 [58.1 kB] Get: 292 http://deb.debian.org/debian buster/main i386 libqt5printsupport5 i386 5.11.3+dfsg1-1+deb10u3 [234 kB] Get: 293 http://deb.debian.org/debian buster/main i386 libqt5sql5 i386 5.11.3+dfsg1-1+deb10u3 [157 kB] Get: 294 http://deb.debian.org/debian buster/main i386 libqt5test5 i386 5.11.3+dfsg1-1+deb10u3 [157 kB] Get: 295 http://deb.debian.org/debian buster/main i386 libvulkan1 i386 1.1.97-2 [102 kB] Get: 296 http://deb.debian.org/debian buster/main i386 libvulkan-dev i386 1.1.97-2 [390 kB] Get: 297 http://deb.debian.org/debian buster/main i386 qt5-qmake-bin i386 5.11.3+dfsg1-1+deb10u3 [1090 kB] Get: 298 http://deb.debian.org/debian buster/main i386 qtchooser i386 66-2 [27.8 kB] Get: 299 http://deb.debian.org/debian buster/main i386 qt5-qmake i386 5.11.3+dfsg1-1+deb10u3 [213 kB] Get: 300 http://deb.debian.org/debian buster/main i386 qtbase5-dev-tools i386 5.11.3+dfsg1-1+deb10u3 [856 kB] Get: 301 http://deb.debian.org/debian buster/main i386 qtbase5-dev i386 5.11.3+dfsg1-1+deb10u3 [1016 kB] Get: 302 http://deb.debian.org/debian buster/main i386 libqt5opengl5-dev i386 5.11.3+dfsg1-1+deb10u3 [63.8 kB] Get: 303 http://deb.debian.org/debian buster/main i386 libsm-dev i386 2:1.2.3-1 [38.8 kB] Get: 304 http://deb.debian.org/debian buster/main i386 libxt-dev i386 1:1.1.5-1+b3 [439 kB] Get: 305 http://deb.debian.org/debian buster/main i386 libxmu-headers all 2:1.1.2-2 [51.9 kB] Get: 306 http://deb.debian.org/debian buster/main i386 libxmu-dev i386 2:1.1.2-2+b3 [70.3 kB] Get: 307 http://deb.debian.org/debian buster/main i386 libqglviewer-dev-qt5 i386 2.6.3+dfsg2-3 [8804 B] Get: 308 http://deb.debian.org/debian buster/main i386 libtbb2 i386 2018~U6-4 [153 kB] Get: 309 http://deb.debian.org/debian buster/main i386 libtbb-dev i386 2018~U6-4 [286 kB] Get: 310 http://deb.debian.org/debian buster/main i386 python-matplotlib-data all 3.0.2-2 [4138 kB] Get: 311 http://deb.debian.org/debian buster/main i386 python3-all i386 3.7.3-1 [1068 B] Get: 312 http://deb.debian.org/debian buster/main i386 python3.7-dev i386 3.7.3-2+deb10u2 [509 kB] Get: 313 http://deb.debian.org/debian buster/main i386 python3-dev i386 3.7.3-1 [1260 B] Get: 314 http://deb.debian.org/debian buster/main i386 python3-all-dev i386 3.7.3-1 [1068 B] Get: 315 http://deb.debian.org/debian buster/main i386 python3-atomicwrites all 1.1.5-2 [6892 B] Get: 316 http://deb.debian.org/debian buster/main i386 python3-attr all 18.2.0-1 [37.3 kB] Get: 317 http://deb.debian.org/debian buster/main i386 python3-six all 1.12.0-1 [15.7 kB] Get: 318 http://deb.debian.org/debian buster/main i386 python3-cycler all 0.10.0-1 [7556 B] Get: 319 http://deb.debian.org/debian buster/main i386 python3-dateutil all 2.7.3-3 [64.5 kB] Get: 320 http://deb.debian.org/debian buster/main i386 python3-pkg-resources all 40.8.0-1 [153 kB] Get: 321 http://deb.debian.org/debian buster/main i386 python3-kiwisolver i386 1.0.1-2+b1 [73.8 kB] Get: 322 http://deb.debian.org/debian buster/main i386 python3-pyparsing all 2.2.0+dfsg1-2 [89.6 kB] Get: 323 http://deb.debian.org/debian buster/main i386 python3-numpy i386 1:1.16.2-1 [2115 kB] Get: 324 http://deb.debian.org/debian buster/main i386 python3-matplotlib i386 3.0.2-2 [5377 kB] Get: 325 http://deb.debian.org/debian buster/main i386 python3-more-itertools all 4.2.0-1 [42.2 kB] Get: 326 http://deb.debian.org/debian buster/main i386 python3-pluggy all 0.8.0-1 [20.6 kB] Get: 327 http://deb.debian.org/debian buster/main i386 python3-py all 1.7.0-2 [86.6 kB] Get: 328 http://deb.debian.org/debian buster/main i386 python3-pytest all 3.10.1-2 [243 kB] Get: 329 http://deb.debian.org/debian buster/main i386 python3-tk i386 3.7.3-1 [98.5 kB] Fetched 213 MB in 5s (41.0 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libbsd0:i386. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19234 files and directories currently installed.) Preparing to unpack .../00-libbsd0_0.9.1-2_i386.deb ... Unpacking libbsd0:i386 (0.9.1-2) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../01-bsdmainutils_11.1.2+b1_i386.deb ... Unpacking bsdmainutils (11.1.2+b1) ... Selecting previously unselected package libuchardet0:i386. Preparing to unpack .../02-libuchardet0_0.0.6-3_i386.deb ... 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Setting up libblas3:i386 (3.8.0-2) ... update-alternatives: using /usr/lib/i386-linux-gnu/blas/libblas.so.3 to provide /usr/lib/i386-linux-gnu/libblas.so.3 (libblas.so.3-i386-linux-gnu) in auto mode Setting up doxygen (1.8.13-10) ... Setting up libxcb-xinerama0:i386 (1.13.1-2) ... Setting up x11proto-damage-dev (1:2018.4-4) ... Setting up libjs-jquery-ui (1.12.1+dfsg-5) ... Setting up libfreetype6:i386 (2.9.1-3+deb10u1) ... Setting up libxcb-sync1:i386 (1.13.1-2) ... Setting up x11proto-core-dev (2018.4-4) ... Setting up bsdmainutils (11.1.2+b1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libxkbcommon-x11-0:i386 (0.8.2-1) ... Setting up libeigen3-dev (3.3.7-1) ... Setting up libgssapi-krb5-2:i386 (1.17-3) ... Setting up libcroco3:i386 (0.6.12-3) ... Setting up ucf (3.0038+nmu1) ... 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I: Building the package I: Running cd /build/gudhi-2.3.0+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b dpkg-buildpackage: info: source package gudhi dpkg-buildpackage: info: source version 2.3.0+dfsg-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Gard Spreemann dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 fakeroot debian/rules clean dh clean --with=python3 --builddirectory=build dh_auto_clean -O--builddirectory=build dh_autoreconf_clean -O--builddirectory=build dh_clean -O--builddirectory=build for py3ver in ; do \ dh clean --with=python3 --builddirectory=build$py3ver ; \ done debian/rules build dh build --with=python3 --builddirectory=build dh_update_autotools_config -O--builddirectory=build dh_autoreconf -O--builddirectory=build debian/rules override_dh_auto_configure make[1]: Entering directory '/build/gudhi-2.3.0+dfsg' dh_auto_configure -- -DWITH_GUDHI_BENCHMARK=true -DWITH_GUDHI_EXAMPLE=true -DWITH_GUDHI_PYTHON=true -DWITH_GUDHI_TEST=true -DWITH_GUDHI_UTILITIES=true -DPython_ADDITIONAL_VERSIONS=3.7 cd build && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/i386-linux-gnu -DWITH_GUDHI_BENCHMARK=true -DWITH_GUDHI_EXAMPLE=true -DWITH_GUDHI_PYTHON=true -DWITH_GUDHI_TEST=true -DWITH_GUDHI_UTILITIES=true -DPython_ADDITIONAL_VERSIONS=3.7 .. -- The C compiler identification is GNU 8.3.0 -- The CXX compiler identification is GNU 8.3.0 -- Check for working C compiler: /usr/bin/cc -- Check for working C compiler: /usr/bin/cc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Detecting C compile features -- Detecting C compile features - done -- Check for working CXX compiler: /usr/bin/c++ -- Check for working CXX compiler: /usr/bin/c++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Detecting CXX compile features -- Detecting CXX compile features - done -- GUDHI version : 2.3.0 -- Looking for pthread.h -- Looking for pthread.h - found -- Looking for pthread_create -- Looking for pthread_create - not found -- Looking for pthread_create in pthreads -- Looking for pthread_create in pthreads - not found -- Looking for pthread_create in pthread -- Looking for pthread_create in pthread - found -- Found Threads: TRUE -- Boost version: 1.67.0 -- Found the following Boost libraries: -- system -- filesystem -- unit_test_framework -- program_options -- thread -- chrono -- date_time -- atomic -- Found GMP: /usr/lib/i386-linux-gnu/libgmp.so -- Found GMPXX: /usr/lib/i386-linux-gnu/libgmpxx.so -- __cplusplus is 201402 -- --> Do not link with Boost.Thread -- Boost version: 1.67.0 -- Boost include dirs: /usr/include -- Boost libraries: -- CGAL version: 4.13.0. -- Build type: None -- USING CXXFLAGS = '-g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 ' -- USING EXEFLAGS = '-Wl,-z,relro -Wl,-z,now ' -- Targetting Unix Makefiles -- Using /usr/bin/c++ compiler. -- Requested component: MPFR -- Requested component: GMPXX -- Requested component: GMP -- Performing Test TBB_without_pthread -- Performing Test TBB_without_pthread - Failed -- Performing Test TBB_with_pthread -- Performing Test TBB_with_pthread - Success -- Found Intel TBB TBB found in /usr/lib/i386-linux-gnu -- Found Eigen3: /usr/include/eigen3 (found suitable version "3.3.7", minimum required is "3.1.0") gprof found in /usr/bin/gprof diff found in /usr/bin/diff -- boost include dirs:/usr/include -- boost library dirs:/usr/lib/i386-linux-gnu -- Found PythonInterp: /usr/bin/python3.7 (found version "3.7.3") -- Checking to see if CXX compiler accepts flag -Wall -- Checking to see if CXX compiler accepts flag -Wall - yes -- Performing Test GUDHI_CAN_USE_CXX11_THREAD_LOCAL_RESULT -- Performing Test GUDHI_CAN_USE_CXX11_THREAD_LOCAL_RESULT - Success ++ Release compilation flags are: -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -O3 -DNDEBUG ++ GUDHI_SUB_DIRECTORIES list is:";benchmark;example;test;utilities" ++ GUDHI_MODULES list is:"common;Alpha_complex;Bitmap_cubical_complex;Bottleneck_distance;Cech_complex;Contraction;Hasse_complex;Persistence_representations;Persistent_cohomology;Rips_complex;Simplex_tree;Skeleton_blocker;Spatial_searching;Subsampling;Tangential_complex;Witness_complex;Nerve_GIC" -- Found Doxygen: /usr/bin/doxygen (found version "1.8.13") found components: doxygen dot CMake Warning (dev) at /usr/share/cmake-3.13/Modules/FindOpenGL.cmake:270 (message): Policy CMP0072 is not set: FindOpenGL prefers GLVND by default when available. Run "cmake --help-policy CMP0072" for policy details. Use the cmake_policy command to set the policy and suppress this warning. FindOpenGL found both a legacy GL library: OPENGL_gl_LIBRARY: /usr/lib/i386-linux-gnu/libGL.so and GLVND libraries for OpenGL and GLX: OPENGL_opengl_LIBRARY: /usr/lib/i386-linux-gnu/libOpenGL.so OPENGL_glx_LIBRARY: /usr/lib/i386-linux-gnu/libGLX.so OpenGL_GL_PREFERENCE has not been set to "GLVND" or "LEGACY", so for compatibility with CMake 3.10 and below the legacy GL library will be used. Call Stack (most recent call first): GudhUI/CMakeLists.txt:4 (find_package) This warning is for project developers. Use -Wno-dev to suppress it. -- Found OpenGL: /usr/lib/i386-linux-gnu/libOpenGL.so -- Found QGLViewer: /usr/lib/i386-linux-gnu/libQGLViewer-qt5.so ++ /usr/bin/python3.7 v.3.7.3 - Cython is 0.29.2 - Sphinx is /usr/bin/python3.7;/build/gudhi-2.3.0+dfsg/cython/doc/python3-sphinx-build.py -- Performing Test CGAL_CAN_USE_CXX11_THREAD_LOCAL_RESULT -- Performing Test CGAL_CAN_USE_CXX11_THREAD_LOCAL_RESULT - Success ++ /usr//lib/i386-linux-gnu/libCGAL.so => UNIX_LIB_FILE_NAME = CGAL ++ /usr/lib/i386-linux-gnu/libboost_system.so => UNIX_LIB_FILE_NAME = boost_system ++ /usr/lib/i386-linux-gnu/libgmp.so => UNIX_LIB_FILE_NAME = gmp ++ /usr/lib/i386-linux-gnu/libgmpxx.so => UNIX_LIB_FILE_NAME = gmpxx ++ /usr/lib/i386-linux-gnu/libtbb.so => UNIX_LIB_FILE_NAME = tbb ++ /usr/lib/i386-linux-gnu/libtbbmalloc.so => UNIX_LIB_FILE_NAME = tbbmalloc ++ make install will install GUDHI in the following directory : /usr -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_INSTALL_LIBDIR CMAKE_INSTALL_LOCALSTATEDIR CMAKE_INSTALL_RUNSTATEDIR CMAKE_INSTALL_SYSCONFDIR -- Build files have been written to: /build/gudhi-2.3.0+dfsg/build for py3ver in ; do \ dh_auto_configure --builddirectory=build$py3ver -- -DWITH_GUDHI_BENCHMARK=false -DWITH_GUDHI_EXAMPLE=false -DWITH_GUDHI_PYTHON=true -DWITH_GUDHI_TEST=true -DWITH_GUDHI_UTILITIES=false -DPython_ADDITIONAL_VERSIONS=$py3ver ; \ done make[1]: Leaving directory '/build/gudhi-2.3.0+dfsg' debian/rules override_dh_auto_build-arch make[1]: Entering directory '/build/gudhi-2.3.0+dfsg' dh_auto_build --builddirectory=build cd build && make -j18 "INSTALL=install --strip-program=true" make[2]: Entering directory '/build/gudhi-2.3.0+dfsg/build' /usr/bin/cmake -S/build/gudhi-2.3.0+dfsg -B/build/gudhi-2.3.0+dfsg/build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/gudhi-2.3.0+dfsg/build/CMakeFiles /build/gudhi-2.3.0+dfsg/build/CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[3]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make -f example/common/CMakeFiles/cgal_3D_off_reader.dir/build.make example/common/CMakeFiles/cgal_3D_off_reader.dir/depend make -f example/common/CMakeFiles/vector_double_off_reader.dir/build.make example/common/CMakeFiles/vector_double_off_reader.dir/depend make -f example/common/CMakeFiles/cgal_off_reader.dir/build.make example/common/CMakeFiles/cgal_off_reader.dir/depend make -f utilities/common/CMakeFiles/off_file_from_shape_generator.dir/build.make utilities/common/CMakeFiles/off_file_from_shape_generator.dir/depend make -f example/Alpha_complex/CMakeFiles/Alpha_complex_example_from_off.dir/build.make example/Alpha_complex/CMakeFiles/Alpha_complex_example_from_off.dir/depend make -f example/Alpha_complex/CMakeFiles/Alpha_complex_example_from_points.dir/build.make example/Alpha_complex/CMakeFiles/Alpha_complex_example_from_points.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/common /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/common /build/gudhi-2.3.0+dfsg/build/example/common/CMakeFiles/cgal_3D_off_reader.dir/DependInfo.cmake --color= make -f utilities/Alpha_complex/CMakeFiles/exact_alpha_complex_3d_persistence.dir/build.make utilities/Alpha_complex/CMakeFiles/exact_alpha_complex_3d_persistence.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/common /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/common /build/gudhi-2.3.0+dfsg/build/example/common/CMakeFiles/vector_double_off_reader.dir/DependInfo.cmake --color= make -f utilities/Alpha_complex/CMakeFiles/alpha_complex_3d_persistence.dir/build.make utilities/Alpha_complex/CMakeFiles/alpha_complex_3d_persistence.dir/depend make -f utilities/Alpha_complex/CMakeFiles/weighted_alpha_complex_3d_persistence.dir/build.make utilities/Alpha_complex/CMakeFiles/weighted_alpha_complex_3d_persistence.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/common /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/common /build/gudhi-2.3.0+dfsg/build/utilities/common/CMakeFiles/off_file_from_shape_generator.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/common /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/common /build/gudhi-2.3.0+dfsg/build/example/common/CMakeFiles/cgal_off_reader.dir/DependInfo.cmake --color= make -f utilities/Alpha_complex/CMakeFiles/alpha_complex_persistence.dir/build.make utilities/Alpha_complex/CMakeFiles/alpha_complex_persistence.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Alpha_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Alpha_complex /build/gudhi-2.3.0+dfsg/build/example/Alpha_complex/CMakeFiles/Alpha_complex_example_from_off.dir/DependInfo.cmake --color= make -f utilities/Alpha_complex/CMakeFiles/periodic_alpha_complex_3d_persistence.dir/build.make utilities/Alpha_complex/CMakeFiles/periodic_alpha_complex_3d_persistence.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Alpha_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Alpha_complex /build/gudhi-2.3.0+dfsg/build/example/Alpha_complex/CMakeFiles/Alpha_complex_example_from_points.dir/DependInfo.cmake --color= make -f utilities/Alpha_complex/CMakeFiles/weighted_periodic_alpha_complex_3d_persistence.dir/build.make utilities/Alpha_complex/CMakeFiles/weighted_periodic_alpha_complex_3d_persistence.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Alpha_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Alpha_complex /build/gudhi-2.3.0+dfsg/build/utilities/Alpha_complex/CMakeFiles/alpha_complex_3d_persistence.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Alpha_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Alpha_complex /build/gudhi-2.3.0+dfsg/build/utilities/Alpha_complex/CMakeFiles/exact_alpha_complex_3d_persistence.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Alpha_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Alpha_complex /build/gudhi-2.3.0+dfsg/build/utilities/Alpha_complex/CMakeFiles/weighted_alpha_complex_3d_persistence.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Alpha_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Alpha_complex /build/gudhi-2.3.0+dfsg/build/utilities/Alpha_complex/CMakeFiles/alpha_complex_persistence.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Bitmap_cubical_complex/CMakeFiles/Random_bitmap_cubical_complex.dir/build.make example/Bitmap_cubical_complex/CMakeFiles/Random_bitmap_cubical_complex.dir/depend cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Alpha_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Alpha_complex /build/gudhi-2.3.0+dfsg/build/utilities/Alpha_complex/CMakeFiles/periodic_alpha_complex_3d_persistence.dir/DependInfo.cmake --color= make -f utilities/Bitmap_cubical_complex/CMakeFiles/periodic_cubical_complex_persistence.dir/build.make utilities/Bitmap_cubical_complex/CMakeFiles/periodic_cubical_complex_persistence.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Alpha_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Alpha_complex /build/gudhi-2.3.0+dfsg/build/utilities/Alpha_complex/CMakeFiles/weighted_periodic_alpha_complex_3d_persistence.dir/DependInfo.cmake --color= make -f utilities/Bitmap_cubical_complex/CMakeFiles/cubical_complex_persistence.dir/build.make utilities/Bitmap_cubical_complex/CMakeFiles/cubical_complex_persistence.dir/depend make -f example/Bottleneck_distance/CMakeFiles/alpha_rips_persistence_bottleneck_distance.dir/build.make example/Bottleneck_distance/CMakeFiles/alpha_rips_persistence_bottleneck_distance.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Bitmap_cubical_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Bitmap_cubical_complex /build/gudhi-2.3.0+dfsg/build/example/Bitmap_cubical_complex/CMakeFiles/Random_bitmap_cubical_complex.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Bitmap_cubical_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Bitmap_cubical_complex /build/gudhi-2.3.0+dfsg/build/utilities/Bitmap_cubical_complex/CMakeFiles/periodic_cubical_complex_persistence.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Bitmap_cubical_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Bitmap_cubical_complex /build/gudhi-2.3.0+dfsg/build/utilities/Bitmap_cubical_complex/CMakeFiles/cubical_complex_persistence.dir/DependInfo.cmake --color= make -f example/Bottleneck_distance/CMakeFiles/bottleneck_basic_example.dir/build.make example/Bottleneck_distance/CMakeFiles/bottleneck_basic_example.dir/depend make -f utilities/Bottleneck_distance/CMakeFiles/bottleneck_distance.dir/build.make utilities/Bottleneck_distance/CMakeFiles/bottleneck_distance.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Bottleneck_distance /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Bottleneck_distance /build/gudhi-2.3.0+dfsg/build/example/Bottleneck_distance/CMakeFiles/alpha_rips_persistence_bottleneck_distance.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Bottleneck_distance /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Bottleneck_distance /build/gudhi-2.3.0+dfsg/build/example/Bottleneck_distance/CMakeFiles/bottleneck_basic_example.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Bottleneck_distance /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Bottleneck_distance /build/gudhi-2.3.0+dfsg/build/utilities/Bottleneck_distance/CMakeFiles/bottleneck_distance.dir/DependInfo.cmake --color= Scanning dependencies of target cgal_3D_off_reader Scanning dependencies of target vector_double_off_reader Scanning dependencies of target cgal_off_reader make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/common/CMakeFiles/cgal_3D_off_reader.dir/build.make example/common/CMakeFiles/cgal_3D_off_reader.dir/build Scanning dependencies of target Alpha_complex_example_from_off Scanning dependencies of target Alpha_complex_example_from_points Scanning dependencies of target off_file_from_shape_generator make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' Scanning dependencies of target periodic_alpha_complex_3d_persistence make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/common/CMakeFiles/cgal_off_reader.dir/build.make example/common/CMakeFiles/cgal_off_reader.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' Scanning dependencies of target exact_alpha_complex_3d_persistence make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/common/CMakeFiles/vector_double_off_reader.dir/build.make example/common/CMakeFiles/vector_double_off_reader.dir/build Scanning dependencies of target weighted_alpha_complex_3d_persistence make -f utilities/common/CMakeFiles/off_file_from_shape_generator.dir/build.make utilities/common/CMakeFiles/off_file_from_shape_generator.dir/build Scanning dependencies of target alpha_complex_3d_persistence make -f example/Alpha_complex/CMakeFiles/Alpha_complex_example_from_off.dir/build.make example/Alpha_complex/CMakeFiles/Alpha_complex_example_from_off.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Alpha_complex/CMakeFiles/Alpha_complex_example_from_points.dir/build.make example/Alpha_complex/CMakeFiles/Alpha_complex_example_from_points.dir/build make -f utilities/Alpha_complex/CMakeFiles/exact_alpha_complex_3d_persistence.dir/build.make utilities/Alpha_complex/CMakeFiles/exact_alpha_complex_3d_persistence.dir/build make -f utilities/Alpha_complex/CMakeFiles/weighted_alpha_complex_3d_persistence.dir/build.make utilities/Alpha_complex/CMakeFiles/weighted_alpha_complex_3d_persistence.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' Scanning dependencies of target alpha_complex_persistence make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Alpha_complex/CMakeFiles/alpha_complex_3d_persistence.dir/build.make utilities/Alpha_complex/CMakeFiles/alpha_complex_3d_persistence.dir/build Scanning dependencies of target Random_bitmap_cubical_complex make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' Scanning dependencies of target weighted_periodic_alpha_complex_3d_persistence make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Alpha_complex/CMakeFiles/periodic_alpha_complex_3d_persistence.dir/build.make utilities/Alpha_complex/CMakeFiles/periodic_alpha_complex_3d_persistence.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' Scanning dependencies of target periodic_cubical_complex_persistence make -f utilities/Alpha_complex/CMakeFiles/alpha_complex_persistence.dir/build.make utilities/Alpha_complex/CMakeFiles/alpha_complex_persistence.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' Scanning dependencies of target cubical_complex_persistence make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Alpha_complex/CMakeFiles/weighted_periodic_alpha_complex_3d_persistence.dir/build.make utilities/Alpha_complex/CMakeFiles/weighted_periodic_alpha_complex_3d_persistence.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' Scanning dependencies of target bottleneck_basic_example make -f example/Bitmap_cubical_complex/CMakeFiles/Random_bitmap_cubical_complex.dir/build.make example/Bitmap_cubical_complex/CMakeFiles/Random_bitmap_cubical_complex.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' Scanning dependencies of target alpha_rips_persistence_bottleneck_distance make -f utilities/Bitmap_cubical_complex/CMakeFiles/periodic_cubical_complex_persistence.dir/build.make utilities/Bitmap_cubical_complex/CMakeFiles/periodic_cubical_complex_persistence.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Bitmap_cubical_complex/CMakeFiles/cubical_complex_persistence.dir/build.make utilities/Bitmap_cubical_complex/CMakeFiles/cubical_complex_persistence.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Bottleneck_distance/CMakeFiles/alpha_rips_persistence_bottleneck_distance.dir/build.make example/Bottleneck_distance/CMakeFiles/alpha_rips_persistence_bottleneck_distance.dir/build Scanning dependencies of target bottleneck_distance make -f example/Bottleneck_distance/CMakeFiles/bottleneck_basic_example.dir/build.make example/Bottleneck_distance/CMakeFiles/bottleneck_basic_example.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 1%] Building CXX object example/common/CMakeFiles/cgal_3D_off_reader.dir/example_CGAL_3D_points_off_reader.cpp.o cd /build/gudhi-2.3.0+dfsg/build/example/common && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/cgal_3D_off_reader.dir/example_CGAL_3D_points_off_reader.cpp.o -c /build/gudhi-2.3.0+dfsg/example/common/example_CGAL_3D_points_off_reader.cpp [ 1%] Building CXX object example/common/CMakeFiles/cgal_off_reader.dir/example_CGAL_points_off_reader.cpp.o [ 1%] Building CXX object example/Alpha_complex/CMakeFiles/Alpha_complex_example_from_off.dir/Alpha_complex_from_off.cpp.o [ 1%] Building CXX object utilities/Alpha_complex/CMakeFiles/exact_alpha_complex_3d_persistence.dir/exact_alpha_complex_3d_persistence.cpp.o cd /build/gudhi-2.3.0+dfsg/build/example/common && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/cgal_off_reader.dir/example_CGAL_points_off_reader.cpp.o -c /build/gudhi-2.3.0+dfsg/example/common/example_CGAL_points_off_reader.cpp [ 2%] Building CXX object utilities/common/CMakeFiles/off_file_from_shape_generator.dir/off_file_from_shape_generator.cpp.o cd /build/gudhi-2.3.0+dfsg/build/example/Alpha_complex && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/Alpha_complex_example_from_off.dir/Alpha_complex_from_off.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Alpha_complex/Alpha_complex_from_off.cpp cd /build/gudhi-2.3.0+dfsg/build/utilities/Alpha_complex && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/exact_alpha_complex_3d_persistence.dir/exact_alpha_complex_3d_persistence.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Alpha_complex/exact_alpha_complex_3d_persistence.cpp [ 3%] Building CXX object example/Alpha_complex/CMakeFiles/Alpha_complex_example_from_points.dir/Alpha_complex_from_points.cpp.o make -f utilities/Bottleneck_distance/CMakeFiles/bottleneck_distance.dir/build.make utilities/Bottleneck_distance/CMakeFiles/bottleneck_distance.dir/build cd /build/gudhi-2.3.0+dfsg/build/utilities/common && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/off_file_from_shape_generator.dir/off_file_from_shape_generator.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/common/off_file_from_shape_generator.cpp [ 3%] Building CXX object example/common/CMakeFiles/vector_double_off_reader.dir/example_vector_double_points_off_reader.cpp.o [ 3%] Building CXX object utilities/Alpha_complex/CMakeFiles/alpha_complex_3d_persistence.dir/alpha_complex_3d_persistence.cpp.o cd /build/gudhi-2.3.0+dfsg/build/example/common && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/vector_double_off_reader.dir/example_vector_double_points_off_reader.cpp.o -c /build/gudhi-2.3.0+dfsg/example/common/example_vector_double_points_off_reader.cpp make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 4%] Building CXX object utilities/Alpha_complex/CMakeFiles/periodic_alpha_complex_3d_persistence.dir/periodic_alpha_complex_3d_persistence.cpp.o cd /build/gudhi-2.3.0+dfsg/build/utilities/Alpha_complex && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/alpha_complex_3d_persistence.dir/alpha_complex_3d_persistence.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Alpha_complex/alpha_complex_3d_persistence.cpp [ 4%] Building CXX object utilities/Alpha_complex/CMakeFiles/alpha_complex_persistence.dir/alpha_complex_persistence.cpp.o cd /build/gudhi-2.3.0+dfsg/build/utilities/Alpha_complex && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/periodic_alpha_complex_3d_persistence.dir/periodic_alpha_complex_3d_persistence.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Alpha_complex/periodic_alpha_complex_3d_persistence.cpp cd /build/gudhi-2.3.0+dfsg/build/example/Alpha_complex && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/Alpha_complex_example_from_points.dir/Alpha_complex_from_points.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Alpha_complex/Alpha_complex_from_points.cpp [ 4%] Building CXX object utilities/Alpha_complex/CMakeFiles/weighted_alpha_complex_3d_persistence.dir/weighted_alpha_complex_3d_persistence.cpp.o [ 5%] Building CXX object example/Bitmap_cubical_complex/CMakeFiles/Random_bitmap_cubical_complex.dir/Random_bitmap_cubical_complex.cpp.o cd /build/gudhi-2.3.0+dfsg/build/utilities/Alpha_complex && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/alpha_complex_persistence.dir/alpha_complex_persistence.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Alpha_complex/alpha_complex_persistence.cpp [ 6%] Building CXX object utilities/Bitmap_cubical_complex/CMakeFiles/periodic_cubical_complex_persistence.dir/periodic_cubical_complex_persistence.cpp.o cd /build/gudhi-2.3.0+dfsg/build/example/Bitmap_cubical_complex && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/Random_bitmap_cubical_complex.dir/Random_bitmap_cubical_complex.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Bitmap_cubical_complex/Random_bitmap_cubical_complex.cpp cd /build/gudhi-2.3.0+dfsg/build/utilities/Bitmap_cubical_complex && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/periodic_cubical_complex_persistence.dir/periodic_cubical_complex_persistence.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Bitmap_cubical_complex/periodic_cubical_complex_persistence.cpp [ 6%] Building CXX object example/Bottleneck_distance/CMakeFiles/alpha_rips_persistence_bottleneck_distance.dir/alpha_rips_persistence_bottleneck_distance.cpp.o [ 7%] Building CXX object utilities/Bitmap_cubical_complex/CMakeFiles/cubical_complex_persistence.dir/cubical_complex_persistence.cpp.o [ 8%] Building CXX object example/Bottleneck_distance/CMakeFiles/bottleneck_basic_example.dir/bottleneck_basic_example.cpp.o cd /build/gudhi-2.3.0+dfsg/build/utilities/Alpha_complex && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/weighted_alpha_complex_3d_persistence.dir/weighted_alpha_complex_3d_persistence.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Alpha_complex/weighted_alpha_complex_3d_persistence.cpp cd /build/gudhi-2.3.0+dfsg/build/example/Bottleneck_distance && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/alpha_rips_persistence_bottleneck_distance.dir/alpha_rips_persistence_bottleneck_distance.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Bottleneck_distance/alpha_rips_persistence_bottleneck_distance.cpp cd /build/gudhi-2.3.0+dfsg/build/utilities/Bitmap_cubical_complex && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/cubical_complex_persistence.dir/cubical_complex_persistence.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Bitmap_cubical_complex/cubical_complex_persistence.cpp cd /build/gudhi-2.3.0+dfsg/build/example/Bottleneck_distance && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/bottleneck_basic_example.dir/bottleneck_basic_example.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Bottleneck_distance/bottleneck_basic_example.cpp [ 8%] Building CXX object utilities/Alpha_complex/CMakeFiles/weighted_periodic_alpha_complex_3d_persistence.dir/weighted_periodic_alpha_complex_3d_persistence.cpp.o [ 9%] Building CXX object utilities/Bottleneck_distance/CMakeFiles/bottleneck_distance.dir/bottleneck_distance.cpp.o cd /build/gudhi-2.3.0+dfsg/build/utilities/Bottleneck_distance && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/bottleneck_distance.dir/bottleneck_distance.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Bottleneck_distance/bottleneck_distance.cpp cd /build/gudhi-2.3.0+dfsg/build/utilities/Alpha_complex && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/weighted_periodic_alpha_complex_3d_persistence.dir/weighted_periodic_alpha_complex_3d_persistence.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Alpha_complex/weighted_periodic_alpha_complex_3d_persistence.cpp [ 10%] Linking CXX executable vector_double_off_reader cd /build/gudhi-2.3.0+dfsg/build/example/common && /usr/bin/cmake -E cmake_link_script CMakeFiles/vector_double_off_reader.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/vector_double_off_reader.dir/example_vector_double_points_off_reader.cpp.o -o vector_double_off_reader -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 10%] Built target vector_double_off_reader make -f example/Cech_complex/CMakeFiles/Cech_complex_example_step_by_step.dir/build.make example/Cech_complex/CMakeFiles/Cech_complex_example_step_by_step.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Cech_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Cech_complex /build/gudhi-2.3.0+dfsg/build/example/Cech_complex/CMakeFiles/Cech_complex_example_step_by_step.dir/DependInfo.cmake --color= Scanning dependencies of target Cech_complex_example_step_by_step make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Cech_complex/CMakeFiles/Cech_complex_example_step_by_step.dir/build.make example/Cech_complex/CMakeFiles/Cech_complex_example_step_by_step.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 11%] Building CXX object example/Cech_complex/CMakeFiles/Cech_complex_example_step_by_step.dir/cech_complex_step_by_step.cpp.o cd /build/gudhi-2.3.0+dfsg/build/example/Cech_complex && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/Cech_complex_example_step_by_step.dir/cech_complex_step_by_step.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Cech_complex/cech_complex_step_by_step.cpp [ 11%] Linking CXX executable cgal_3D_off_reader cd /build/gudhi-2.3.0+dfsg/build/example/common && /usr/bin/cmake -E cmake_link_script CMakeFiles/cgal_3D_off_reader.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/cgal_3D_off_reader.dir/example_CGAL_3D_points_off_reader.cpp.o -o cgal_3D_off_reader -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp [ 12%] Linking CXX executable cgal_off_reader cd /build/gudhi-2.3.0+dfsg/build/example/common && /usr/bin/cmake -E cmake_link_script CMakeFiles/cgal_off_reader.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/cgal_off_reader.dir/example_CGAL_points_off_reader.cpp.o -o cgal_off_reader -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 12%] Built target cgal_3D_off_reader make -f example/Cech_complex/CMakeFiles/Cech_complex_example_from_points.dir/build.make example/Cech_complex/CMakeFiles/Cech_complex_example_from_points.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Cech_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Cech_complex /build/gudhi-2.3.0+dfsg/build/example/Cech_complex/CMakeFiles/Cech_complex_example_from_points.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' Scanning dependencies of target Cech_complex_example_from_points make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Cech_complex/CMakeFiles/Cech_complex_example_from_points.dir/build.make example/Cech_complex/CMakeFiles/Cech_complex_example_from_points.dir/build [ 12%] Built target cgal_off_reader make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Cech_complex/CMakeFiles/cech_persistence.dir/build.make utilities/Cech_complex/CMakeFiles/cech_persistence.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Cech_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Cech_complex /build/gudhi-2.3.0+dfsg/build/utilities/Cech_complex/CMakeFiles/cech_persistence.dir/DependInfo.cmake --color= [ 13%] Building CXX object example/Cech_complex/CMakeFiles/Cech_complex_example_from_points.dir/cech_complex_example_from_points.cpp.o cd /build/gudhi-2.3.0+dfsg/build/example/Cech_complex && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/Cech_complex_example_from_points.dir/cech_complex_example_from_points.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Cech_complex/cech_complex_example_from_points.cpp Scanning dependencies of target cech_persistence make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Cech_complex/CMakeFiles/cech_persistence.dir/build.make utilities/Cech_complex/CMakeFiles/cech_persistence.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 14%] Building CXX object utilities/Cech_complex/CMakeFiles/cech_persistence.dir/cech_persistence.cpp.o cd /build/gudhi-2.3.0+dfsg/build/utilities/Cech_complex && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/cech_persistence.dir/cech_persistence.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Cech_complex/cech_persistence.cpp [ 14%] Linking CXX executable off_file_from_shape_generator cd /build/gudhi-2.3.0+dfsg/build/utilities/common && /usr/bin/cmake -E cmake_link_script CMakeFiles/off_file_from_shape_generator.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/off_file_from_shape_generator.dir/off_file_from_shape_generator.cpp.o -o off_file_from_shape_generator -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 14%] Built target off_file_from_shape_generator make -f example/Contraction/CMakeFiles/GarlandHeckbert.dir/build.make example/Contraction/CMakeFiles/GarlandHeckbert.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Contraction /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Contraction /build/gudhi-2.3.0+dfsg/build/example/Contraction/CMakeFiles/GarlandHeckbert.dir/DependInfo.cmake --color= Scanning dependencies of target GarlandHeckbert make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Contraction/CMakeFiles/GarlandHeckbert.dir/build.make example/Contraction/CMakeFiles/GarlandHeckbert.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 14%] Building CXX object example/Contraction/CMakeFiles/GarlandHeckbert.dir/Garland_heckbert.cpp.o cd /build/gudhi-2.3.0+dfsg/build/example/Contraction && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/GarlandHeckbert.dir/Garland_heckbert.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Contraction/Garland_heckbert.cpp [ 14%] Linking CXX executable periodic_cubical_complex_persistence cd /build/gudhi-2.3.0+dfsg/build/utilities/Bitmap_cubical_complex && /usr/bin/cmake -E cmake_link_script CMakeFiles/periodic_cubical_complex_persistence.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/periodic_cubical_complex_persistence.dir/periodic_cubical_complex_persistence.cpp.o -o periodic_cubical_complex_persistence -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp [ 14%] Linking CXX executable bottleneck_basic_example cd /build/gudhi-2.3.0+dfsg/build/example/Bottleneck_distance && /usr/bin/cmake -E cmake_link_script CMakeFiles/bottleneck_basic_example.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/bottleneck_basic_example.dir/bottleneck_basic_example.cpp.o -o bottleneck_basic_example -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 14%] Built target periodic_cubical_complex_persistence make -f example/Contraction/CMakeFiles/RipsContraction.dir/build.make example/Contraction/CMakeFiles/RipsContraction.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Contraction /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Contraction /build/gudhi-2.3.0+dfsg/build/example/Contraction/CMakeFiles/RipsContraction.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 14%] Built target bottleneck_basic_example make -f example/Persistence_representations/CMakeFiles/Persistence_representations_example_landscape.dir/build.make example/Persistence_representations/CMakeFiles/Persistence_representations_example_landscape.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Persistence_representations /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Persistence_representations /build/gudhi-2.3.0+dfsg/build/example/Persistence_representations/CMakeFiles/Persistence_representations_example_landscape.dir/DependInfo.cmake --color= Scanning dependencies of target RipsContraction make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Contraction/CMakeFiles/RipsContraction.dir/build.make example/Contraction/CMakeFiles/RipsContraction.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' Scanning dependencies of target Persistence_representations_example_landscape make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Persistence_representations/CMakeFiles/Persistence_representations_example_landscape.dir/build.make example/Persistence_representations/CMakeFiles/Persistence_representations_example_landscape.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 15%] Building CXX object example/Contraction/CMakeFiles/RipsContraction.dir/Rips_contraction.cpp.o cd /build/gudhi-2.3.0+dfsg/build/example/Contraction && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/RipsContraction.dir/Rips_contraction.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Contraction/Rips_contraction.cpp [ 15%] Building CXX object example/Persistence_representations/CMakeFiles/Persistence_representations_example_landscape.dir/persistence_landscape.cpp.o cd /build/gudhi-2.3.0+dfsg/build/example/Persistence_representations && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/Persistence_representations_example_landscape.dir/persistence_landscape.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Persistence_representations/persistence_landscape.cpp [ 15%] Linking CXX executable cubical_complex_persistence cd /build/gudhi-2.3.0+dfsg/build/utilities/Bitmap_cubical_complex && /usr/bin/cmake -E cmake_link_script CMakeFiles/cubical_complex_persistence.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/cubical_complex_persistence.dir/cubical_complex_persistence.cpp.o -o cubical_complex_persistence -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp [ 15%] Linking CXX executable Random_bitmap_cubical_complex cd /build/gudhi-2.3.0+dfsg/build/example/Bitmap_cubical_complex && /usr/bin/cmake -E cmake_link_script CMakeFiles/Random_bitmap_cubical_complex.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Random_bitmap_cubical_complex.dir/Random_bitmap_cubical_complex.cpp.o -o Random_bitmap_cubical_complex -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 15%] Built target cubical_complex_persistence make -f example/Persistence_representations/CMakeFiles/Persistence_representations_example_landscape_on_grid.dir/build.make example/Persistence_representations/CMakeFiles/Persistence_representations_example_landscape_on_grid.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Persistence_representations /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Persistence_representations /build/gudhi-2.3.0+dfsg/build/example/Persistence_representations/CMakeFiles/Persistence_representations_example_landscape_on_grid.dir/DependInfo.cmake --color= Scanning dependencies of target Persistence_representations_example_landscape_on_grid make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Persistence_representations/CMakeFiles/Persistence_representations_example_landscape_on_grid.dir/build.make example/Persistence_representations/CMakeFiles/Persistence_representations_example_landscape_on_grid.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 15%] Building CXX object example/Persistence_representations/CMakeFiles/Persistence_representations_example_landscape_on_grid.dir/persistence_landscape_on_grid.cpp.o cd /build/gudhi-2.3.0+dfsg/build/example/Persistence_representations && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/Persistence_representations_example_landscape_on_grid.dir/persistence_landscape_on_grid.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Persistence_representations/persistence_landscape_on_grid.cpp [ 15%] Built target Random_bitmap_cubical_complex make -f example/Persistence_representations/CMakeFiles/Persistence_representations_example_intervals.dir/build.make example/Persistence_representations/CMakeFiles/Persistence_representations_example_intervals.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Persistence_representations /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Persistence_representations /build/gudhi-2.3.0+dfsg/build/example/Persistence_representations/CMakeFiles/Persistence_representations_example_intervals.dir/DependInfo.cmake --color= Scanning dependencies of target Persistence_representations_example_intervals make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Persistence_representations/CMakeFiles/Persistence_representations_example_intervals.dir/build.make example/Persistence_representations/CMakeFiles/Persistence_representations_example_intervals.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 15%] Building CXX object example/Persistence_representations/CMakeFiles/Persistence_representations_example_intervals.dir/persistence_intervals.cpp.o cd /build/gudhi-2.3.0+dfsg/build/example/Persistence_representations && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/Persistence_representations_example_intervals.dir/persistence_intervals.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Persistence_representations/persistence_intervals.cpp [ 15%] Linking CXX executable bottleneck_distance cd /build/gudhi-2.3.0+dfsg/build/utilities/Bottleneck_distance && /usr/bin/cmake -E cmake_link_script CMakeFiles/bottleneck_distance.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/bottleneck_distance.dir/bottleneck_distance.cpp.o -o bottleneck_distance -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 15%] Built target bottleneck_distance make -f example/Persistence_representations/CMakeFiles/Persistence_representations_example_vectors.dir/build.make example/Persistence_representations/CMakeFiles/Persistence_representations_example_vectors.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Persistence_representations /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Persistence_representations /build/gudhi-2.3.0+dfsg/build/example/Persistence_representations/CMakeFiles/Persistence_representations_example_vectors.dir/DependInfo.cmake --color= Scanning dependencies of target Persistence_representations_example_vectors make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Persistence_representations/CMakeFiles/Persistence_representations_example_vectors.dir/build.make example/Persistence_representations/CMakeFiles/Persistence_representations_example_vectors.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 15%] Building CXX object example/Persistence_representations/CMakeFiles/Persistence_representations_example_vectors.dir/persistence_vectors.cpp.o cd /build/gudhi-2.3.0+dfsg/build/example/Persistence_representations && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/Persistence_representations_example_vectors.dir/persistence_vectors.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Persistence_representations/persistence_vectors.cpp In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/smart_ptr/shared_array.hpp:21, from /usr/include/boost/shared_array.hpp:17, from /usr/include/boost/graph/detail/d_ary_heap.hpp:20, from /usr/include/boost/graph/named_function_params.hpp:24, from /usr/include/boost/graph/depth_first_search.hpp:21, from /usr/include/boost/graph/connected_components.hpp:15, from /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:37, from /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker.h:26, from /build/gudhi-2.3.0+dfsg/example/Contraction/Garland_heckbert.cpp:30: /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Graph_vertex& Gudhi::skeleton_blocker::Skeleton_blocker_complex::operator[](Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) [with SkeletonBlockerDS = Garland_heckbert_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Graph_vertex = Garland_heckbert_traits::Garland_heckbert_vertex; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-2.3.0+dfsg/example/Contraction/Garland_heckbert.cpp:121:33: required from here /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:366:50: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen, boost::vecS, boost::setS, boost::undirectedS, Garland_heckbert_traits::Garland_heckbert_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'unsigned int'} [-Wsign-compare] 0 <= address.vertex && address.vertex < boost::num_vertices(skeleton)); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'const Graph_vertex& Gudhi::skeleton_blocker::Skeleton_blocker_complex::operator[](Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) const [with SkeletonBlockerDS = Garland_heckbert_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Graph_vertex = Garland_heckbert_traits::Garland_heckbert_vertex; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:419:19: required from 'bool Gudhi::skeleton_blocker::Skeleton_blocker_complex::contains_vertex(Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) const [with SkeletonBlockerDS = Garland_heckbert_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_geometric_complex.h:122:5: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Point& Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::point(Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Vertex_handle) [with SkeletonBlockerGeometricDS = Garland_heckbert_traits; Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Point = Point_d; Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/example/Contraction/Garland_heckbert.cpp:124:45: required from here /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:376:50: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen, boost::vecS, boost::setS, boost::undirectedS, Garland_heckbert_traits::Garland_heckbert_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'unsigned int'} [-Wsign-compare] 0 <= address.vertex && address.vertex < boost::num_vertices(skeleton)); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Root_vertex_handle Gudhi::skeleton_blocker::Skeleton_blocker_complex::get_id(Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) const [with SkeletonBlockerDS = Garland_heckbert_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Root_vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Root_vertex_handle; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:585:7: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Edge_handle Gudhi::skeleton_blocker::Skeleton_blocker_complex::add_edge_without_blockers(Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle, Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) [with SkeletonBlockerDS = Garland_heckbert_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Edge_handle = boost::detail::edge_desc_impl; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_simplifiable_complex.h:359:5: required from 'void Gudhi::skeleton_blocker::Skeleton_blocker_complex::contract_edge(Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle, Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) [with SkeletonBlockerDS = Garland_heckbert_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_contractor.h:456:5: required from 'void Gudhi::contraction::Skeleton_blocker_contractor::contract_edge(const Profile&, Gudhi::contraction::Skeleton_blocker_contractor::Placement_type) [with GeometricSimplifiableComplex = Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex; EdgeProfile = Gudhi::contraction::Edge_profile >; Gudhi::contraction::Skeleton_blocker_contractor::Profile = Gudhi::contraction::Edge_profile >; Gudhi::contraction::Skeleton_blocker_contractor::Placement_type = boost::optional; typename EdgeProfile::Point = Point_d]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_contractor.h:352:11: required from 'void Gudhi::contraction::Skeleton_blocker_contractor::contract_edges(int) [with GeometricSimplifiableComplex = Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex; EdgeProfile = Gudhi::contraction::Edge_profile >]' /build/gudhi-2.3.0+dfsg/example/Contraction/Garland_heckbert.cpp:175:45: required from here /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:456:46: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen, boost::vecS, boost::setS, boost::undirectedS, Garland_heckbert_traits::Garland_heckbert_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'unsigned int'} [-Wsign-compare] assert(0 <= local.vertex && local.vertex < boost::num_vertices(skeleton)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'int Gudhi::skeleton_blocker::Skeleton_blocker_complex::degree(Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) const [with SkeletonBlockerDS = Garland_heckbert_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_simplifiable_complex.h:440:16: required from 'void Gudhi::skeleton_blocker::Skeleton_blocker_complex::update_edges_after_contraction(Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle, Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) [with SkeletonBlockerDS = Garland_heckbert_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_simplifiable_complex.h:371:3: required from 'void Gudhi::skeleton_blocker::Skeleton_blocker_complex::contract_edge(Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle, Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) [with SkeletonBlockerDS = Garland_heckbert_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_contractor.h:456:5: required from 'void Gudhi::contraction::Skeleton_blocker_contractor::contract_edge(const Profile&, Gudhi::contraction::Skeleton_blocker_contractor::Placement_type) [with GeometricSimplifiableComplex = Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex; EdgeProfile = Gudhi::contraction::Edge_profile >; Gudhi::contraction::Skeleton_blocker_contractor::Profile = Gudhi::contraction::Edge_profile >; Gudhi::contraction::Skeleton_blocker_contractor::Placement_type = boost::optional; typename EdgeProfile::Point = Point_d]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_contractor.h:352:11: required from 'void Gudhi::contraction::Skeleton_blocker_contractor::contract_edges(int) [with GeometricSimplifiableComplex = Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex; EdgeProfile = Gudhi::contraction::Edge_profile >]' /build/gudhi-2.3.0+dfsg/example/Contraction/Garland_heckbert.cpp:175:45: required from here /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:481:46: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen, boost::vecS, boost::setS, boost::undirectedS, Garland_heckbert_traits::Garland_heckbert_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'unsigned int'} [-Wsign-compare] assert(0 <= local.vertex && local.vertex < boost::num_vertices(skeleton)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/smart_ptr/shared_array.hpp:21, from /usr/include/boost/shared_array.hpp:17, from /usr/include/boost/graph/detail/d_ary_heap.hpp:20, from /usr/include/boost/graph/named_function_params.hpp:24, from /usr/include/boost/graph/depth_first_search.hpp:21, from /usr/include/boost/graph/connected_components.hpp:15, from /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:37, from /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker.h:26, from /build/gudhi-2.3.0+dfsg/example/Contraction/Rips_contraction.cpp:23: /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Graph_vertex& Gudhi::skeleton_blocker::Skeleton_blocker_complex::operator[](Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Graph_vertex = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_geometric_complex.h:123:19: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Point& Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::point(Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Vertex_handle) [with SkeletonBlockerGeometricDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Point = Point_d; Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/example/Contraction/Rips_contraction.cpp:46:23: required from 'void build_rips(ComplexType&, double) [with ComplexType = Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex >]' /build/gudhi-2.3.0+dfsg/example/Contraction/Rips_contraction.cpp:69:36: required from here /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:366:50: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'unsigned int'} [-Wsign-compare] 0 <= address.vertex && address.vertex < boost::num_vertices(skeleton)); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Root_vertex_handle Gudhi::skeleton_blocker::Skeleton_blocker_complex::get_id(Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Root_vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Root_vertex_handle; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:585:7: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Edge_handle Gudhi::skeleton_blocker::Skeleton_blocker_complex::add_edge_without_blockers(Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle, Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Edge_handle = boost::detail::edge_desc_impl; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/example/Contraction/Rips_contraction.cpp:47:9: required from 'void build_rips(ComplexType&, double) [with ComplexType = Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex >]' /build/gudhi-2.3.0+dfsg/example/Contraction/Rips_contraction.cpp:69:36: required from here /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:456:46: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'unsigned int'} [-Wsign-compare] assert(0 <= local.vertex && local.vertex < boost::num_vertices(skeleton)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'const Graph_vertex& Gudhi::skeleton_blocker::Skeleton_blocker_complex::operator[](Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Graph_vertex = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:419:19: required from 'bool Gudhi::skeleton_blocker::Skeleton_blocker_complex::contains_vertex(Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_geometric_complex.h:122:5: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Point& Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::point(Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Vertex_handle) [with SkeletonBlockerGeometricDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Point = Point_d; Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/example/Contraction/Rips_contraction.cpp:46:23: required from 'void build_rips(ComplexType&, double) [with ComplexType = Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex >]' /build/gudhi-2.3.0+dfsg/example/Contraction/Rips_contraction.cpp:69:36: required from here /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:376:50: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'unsigned int'} [-Wsign-compare] 0 <= address.vertex && address.vertex < boost::num_vertices(skeleton)); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /build/gudhi-2.3.0+dfsg/example/Persistence_representations/persistence_vectors.cpp:23: /build/gudhi-2.3.0+dfsg/include/gudhi/Persistence_vectors.h: In member function 'void Gudhi::Persistence_representations::Vector_distances_in_diagram::compute_average(const std::vector*>&) [with F = Gudhi::Euclidean_distance]': /build/gudhi-2.3.0+dfsg/include/gudhi/Persistence_vectors.h:66:7: warning: '.Gudhi::Persistence_representations::Vector_distances_in_diagram::number_of_functions_for_vectorization' may be used uninitialized in this function [-Wmaybe-uninitialized] class Vector_distances_in_diagram { ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gudhi-2.3.0+dfsg/include/gudhi/Persistence_vectors.h:66:7: warning: '.Gudhi::Persistence_representations::Vector_distances_in_diagram::number_of_functions_for_projections_to_reals' may be used uninitialized in this function [-Wmaybe-uninitialized] /build/gudhi-2.3.0+dfsg/include/gudhi/Persistence_vectors.h:66:7: warning: '.Gudhi::Persistence_representations::Vector_distances_in_diagram::where_to_cut' may be used uninitialized in this function [-Wmaybe-uninitialized] /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'int Gudhi::skeleton_blocker::Skeleton_blocker_complex::degree(Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_simplifiable_complex.h:440:16: required from 'void Gudhi::skeleton_blocker::Skeleton_blocker_complex::update_edges_after_contraction(Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle, Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_simplifiable_complex.h:371:3: required from 'void Gudhi::skeleton_blocker::Skeleton_blocker_complex::contract_edge(Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle, Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_contractor.h:456:5: required from 'void Gudhi::contraction::Skeleton_blocker_contractor::contract_edge(const Profile&, Gudhi::contraction::Skeleton_blocker_contractor::Placement_type) [with GeometricSimplifiableComplex = Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex >; EdgeProfile = Gudhi::contraction::Edge_profile > >; Gudhi::contraction::Skeleton_blocker_contractor::Profile = Gudhi::contraction::Edge_profile > >; Gudhi::contraction::Skeleton_blocker_contractor::Placement_type = boost::optional; typename EdgeProfile::Point = Point_d]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_contractor.h:352:11: required from 'void Gudhi::contraction::Skeleton_blocker_contractor::contract_edges(int) [with GeometricSimplifiableComplex = Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex >; EdgeProfile = Gudhi::contraction::Edge_profile > >]' /build/gudhi-2.3.0+dfsg/example/Contraction/Rips_contraction.cpp:82:29: required from here /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:481:46: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'unsigned int'} [-Wsign-compare] assert(0 <= local.vertex && local.vertex < boost::num_vertices(skeleton)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 15%] Linking CXX executable Cech_complex_example_step_by_step cd /build/gudhi-2.3.0+dfsg/build/example/Cech_complex && /usr/bin/cmake -E cmake_link_script CMakeFiles/Cech_complex_example_step_by_step.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Cech_complex_example_step_by_step.dir/cech_complex_step_by_step.cpp.o -o Cech_complex_example_step_by_step -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -lboost_program_options -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp [ 16%] Linking CXX executable Persistence_representations_example_intervals cd /build/gudhi-2.3.0+dfsg/build/example/Persistence_representations && /usr/bin/cmake -E cmake_link_script CMakeFiles/Persistence_representations_example_intervals.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Persistence_representations_example_intervals.dir/persistence_intervals.cpp.o -o Persistence_representations_example_intervals -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 16%] Linking CXX executable Persistence_representations_example_vectors cd /build/gudhi-2.3.0+dfsg/build/example/Persistence_representations && /usr/bin/cmake -E cmake_link_script CMakeFiles/Persistence_representations_example_vectors.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Persistence_representations_example_vectors.dir/persistence_vectors.cpp.o -o Persistence_representations_example_vectors -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 16%] Built target Persistence_representations_example_vectors make -f example/Persistence_representations/CMakeFiles/Persistence_representations_example_heat_maps.dir/build.make example/Persistence_representations/CMakeFiles/Persistence_representations_example_heat_maps.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Persistence_representations /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Persistence_representations /build/gudhi-2.3.0+dfsg/build/example/Persistence_representations/CMakeFiles/Persistence_representations_example_heat_maps.dir/DependInfo.cmake --color= [ 16%] Built target Cech_complex_example_step_by_step make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/compute_distance_of_persistence_heat_maps.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/compute_distance_of_persistence_heat_maps.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/compute_distance_of_persistence_heat_maps.dir/DependInfo.cmake --color= [ 16%] Built target Persistence_representations_example_intervals make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_arctan_of_their_persistence.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_arctan_of_their_persistence.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_arctan_of_their_persistence.dir/DependInfo.cmake --color= Scanning dependencies of target Persistence_representations_example_heat_maps Scanning dependencies of target compute_distance_of_persistence_heat_maps make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' Scanning dependencies of target create_p_h_m_weighted_by_arctan_of_their_persistence make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/compute_distance_of_persistence_heat_maps.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/compute_distance_of_persistence_heat_maps.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_arctan_of_their_persistence.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_arctan_of_their_persistence.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Persistence_representations/CMakeFiles/Persistence_representations_example_heat_maps.dir/build.make example/Persistence_representations/CMakeFiles/Persistence_representations_example_heat_maps.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 16%] Building CXX object utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/compute_distance_of_persistence_heat_maps.dir/compute_distance_of_persistence_heat_maps.cpp.o [ 17%] Linking CXX executable Persistence_representations_example_landscape_on_grid cd /build/gudhi-2.3.0+dfsg/build/example/Persistence_representations && /usr/bin/cmake -E cmake_link_script CMakeFiles/Persistence_representations_example_landscape_on_grid.dir/link.txt --verbose=1 [ 17%] Building CXX object utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_arctan_of_their_persistence.dir/create_p_h_m_weighted_by_arctan_of_their_persistence.cpp.o cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/compute_distance_of_persistence_heat_maps.dir/compute_distance_of_persistence_heat_maps.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps/compute_distance_of_persistence_heat_maps.cpp cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/create_p_h_m_weighted_by_arctan_of_their_persistence.dir/create_p_h_m_weighted_by_arctan_of_their_persistence.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps/create_p_h_m_weighted_by_arctan_of_their_persistence.cpp [ 17%] Building CXX object example/Persistence_representations/CMakeFiles/Persistence_representations_example_heat_maps.dir/persistence_heat_maps.cpp.o /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Persistence_representations_example_landscape_on_grid.dir/persistence_landscape_on_grid.cpp.o -o Persistence_representations_example_landscape_on_grid -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp cd /build/gudhi-2.3.0+dfsg/build/example/Persistence_representations && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/Persistence_representations_example_heat_maps.dir/persistence_heat_maps.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Persistence_representations/persistence_heat_maps.cpp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 17%] Built target Persistence_representations_example_landscape_on_grid make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_pssk.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_pssk.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_pssk.dir/DependInfo.cmake --color= Scanning dependencies of target create_pssk make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_pssk.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_pssk.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 18%] Building CXX object utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_pssk.dir/create_pssk.cpp.o cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/create_pssk.dir/create_pssk.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps/create_pssk.cpp [ 19%] Linking CXX executable Persistence_representations_example_landscape cd /build/gudhi-2.3.0+dfsg/build/example/Persistence_representations && /usr/bin/cmake -E cmake_link_script CMakeFiles/Persistence_representations_example_landscape.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Persistence_representations_example_landscape.dir/persistence_landscape.cpp.o -o Persistence_representations_example_landscape -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 19%] Built target Persistence_representations_example_landscape make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/average_persistence_heat_maps.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/average_persistence_heat_maps.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/average_persistence_heat_maps.dir/DependInfo.cmake --color= Scanning dependencies of target average_persistence_heat_maps make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/average_persistence_heat_maps.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/average_persistence_heat_maps.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 19%] Building CXX object utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/average_persistence_heat_maps.dir/average_persistence_heat_maps.cpp.o cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/average_persistence_heat_maps.dir/average_persistence_heat_maps.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps/average_persistence_heat_maps.cpp [ 19%] Linking CXX executable Cech_complex_example_from_points cd /build/gudhi-2.3.0+dfsg/build/example/Cech_complex && /usr/bin/cmake -E cmake_link_script CMakeFiles/Cech_complex_example_from_points.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Cech_complex_example_from_points.dir/cech_complex_example_from_points.cpp.o -o Cech_complex_example_from_points -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 19%] Built target Cech_complex_example_from_points make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_distance_from_diagonal.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_distance_from_diagonal.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_distance_from_diagonal.dir/DependInfo.cmake --color= Scanning dependencies of target create_p_h_m_weighted_by_distance_from_diagonal make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_distance_from_diagonal.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_distance_from_diagonal.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 19%] Building CXX object utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_distance_from_diagonal.dir/create_p_h_m_weighted_by_distance_from_diagonal.cpp.o cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/create_p_h_m_weighted_by_distance_from_diagonal.dir/create_p_h_m_weighted_by_distance_from_diagonal.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps/create_p_h_m_weighted_by_distance_from_diagonal.cpp [ 20%] Linking CXX executable compute_distance_of_persistence_heat_maps cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps && /usr/bin/cmake -E cmake_link_script CMakeFiles/compute_distance_of_persistence_heat_maps.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/compute_distance_of_persistence_heat_maps.dir/compute_distance_of_persistence_heat_maps.cpp.o -o compute_distance_of_persistence_heat_maps -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 21%] Linking CXX executable create_p_h_m_weighted_by_arctan_of_their_persistence cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps && /usr/bin/cmake -E cmake_link_script CMakeFiles/create_p_h_m_weighted_by_arctan_of_their_persistence.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/create_p_h_m_weighted_by_arctan_of_their_persistence.dir/create_p_h_m_weighted_by_arctan_of_their_persistence.cpp.o -o create_p_h_m_weighted_by_arctan_of_their_persistence -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp [ 21%] Built target compute_distance_of_persistence_heat_maps make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_squared_diag_distance.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_squared_diag_distance.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_squared_diag_distance.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 21%] Built target create_p_h_m_weighted_by_arctan_of_their_persistence make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/compute_scalar_product_of_persistence_heat_maps.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/compute_scalar_product_of_persistence_heat_maps.dir/depend Scanning dependencies of target create_p_h_m_weighted_by_squared_diag_distance make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/compute_scalar_product_of_persistence_heat_maps.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_squared_diag_distance.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_squared_diag_distance.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' Scanning dependencies of target compute_scalar_product_of_persistence_heat_maps make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/compute_scalar_product_of_persistence_heat_maps.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/compute_scalar_product_of_persistence_heat_maps.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 21%] Building CXX object utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_squared_diag_distance.dir/create_p_h_m_weighted_by_squared_diag_distance.cpp.o cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/create_p_h_m_weighted_by_squared_diag_distance.dir/create_p_h_m_weighted_by_squared_diag_distance.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps/create_p_h_m_weighted_by_squared_diag_distance.cpp [ 22%] Building CXX object utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/compute_scalar_product_of_persistence_heat_maps.dir/compute_scalar_product_of_persistence_heat_maps.cpp.o cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/compute_scalar_product_of_persistence_heat_maps.dir/compute_scalar_product_of_persistence_heat_maps.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps/compute_scalar_product_of_persistence_heat_maps.cpp [ 22%] Linking CXX executable create_pssk cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps && /usr/bin/cmake -E cmake_link_script CMakeFiles/create_pssk.dir/link.txt --verbose=1 [ 23%] Linking CXX executable Persistence_representations_example_heat_maps /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/create_pssk.dir/create_pssk.cpp.o -o create_pssk -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp cd /build/gudhi-2.3.0+dfsg/build/example/Persistence_representations && /usr/bin/cmake -E cmake_link_script CMakeFiles/Persistence_representations_example_heat_maps.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Persistence_representations_example_heat_maps.dir/persistence_heat_maps.cpp.o -o Persistence_representations_example_heat_maps -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 23%] Built target Persistence_representations_example_heat_maps make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_persistence_heat_maps.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_persistence_heat_maps.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_persistence_heat_maps.dir/DependInfo.cmake --color= [ 23%] Built target create_pssk Scanning dependencies of target create_persistence_heat_maps make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_persistence_heat_maps.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_persistence_heat_maps.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/plot_persistence_heat_map.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/plot_persistence_heat_map.dir/depend [ 23%] Building CXX object utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_persistence_heat_maps.dir/create_persistence_heat_maps.cpp.o cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/create_persistence_heat_maps.dir/create_persistence_heat_maps.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps/create_persistence_heat_maps.cpp make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/plot_persistence_heat_map.dir/DependInfo.cmake --color= Scanning dependencies of target plot_persistence_heat_map make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/plot_persistence_heat_map.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/plot_persistence_heat_map.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 23%] Building CXX object utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/plot_persistence_heat_map.dir/plot_persistence_heat_map.cpp.o cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/plot_persistence_heat_map.dir/plot_persistence_heat_map.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps/plot_persistence_heat_map.cpp [ 23%] Linking CXX executable average_persistence_heat_maps cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps && /usr/bin/cmake -E cmake_link_script CMakeFiles/average_persistence_heat_maps.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/average_persistence_heat_maps.dir/average_persistence_heat_maps.cpp.o -o average_persistence_heat_maps -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 23%] Built target average_persistence_heat_maps make -f utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_persistence_intervals.dir/build.make utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_persistence_intervals.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_intervals /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_persistence_intervals.dir/DependInfo.cmake --color= Scanning dependencies of target plot_persistence_intervals make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_persistence_intervals.dir/build.make utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_persistence_intervals.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 23%] Building CXX object utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_persistence_intervals.dir/plot_persistence_intervals.cpp.o cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/plot_persistence_intervals.dir/plot_persistence_intervals.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_intervals/plot_persistence_intervals.cpp [ 24%] Linking CXX executable create_p_h_m_weighted_by_distance_from_diagonal cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps && /usr/bin/cmake -E cmake_link_script CMakeFiles/create_p_h_m_weighted_by_distance_from_diagonal.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/create_p_h_m_weighted_by_distance_from_diagonal.dir/create_p_h_m_weighted_by_distance_from_diagonal.cpp.o -o create_p_h_m_weighted_by_distance_from_diagonal -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 24%] Built target create_p_h_m_weighted_by_distance_from_diagonal make -f utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_number_of_dominant_intervals.dir/build.make utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_number_of_dominant_intervals.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_intervals /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_number_of_dominant_intervals.dir/DependInfo.cmake --color= Scanning dependencies of target compute_number_of_dominant_intervals make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_number_of_dominant_intervals.dir/build.make utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_number_of_dominant_intervals.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 25%] Building CXX object utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_number_of_dominant_intervals.dir/compute_number_of_dominant_intervals.cpp.o cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/compute_number_of_dominant_intervals.dir/compute_number_of_dominant_intervals.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_intervals/compute_number_of_dominant_intervals.cpp [ 26%] Linking CXX executable create_p_h_m_weighted_by_squared_diag_distance [ 26%] Linking CXX executable compute_scalar_product_of_persistence_heat_maps cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps && /usr/bin/cmake -E cmake_link_script CMakeFiles/create_p_h_m_weighted_by_squared_diag_distance.dir/link.txt --verbose=1 cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps && /usr/bin/cmake -E cmake_link_script CMakeFiles/compute_scalar_product_of_persistence_heat_maps.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/compute_scalar_product_of_persistence_heat_maps.dir/compute_scalar_product_of_persistence_heat_maps.cpp.o -o compute_scalar_product_of_persistence_heat_maps -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/create_p_h_m_weighted_by_squared_diag_distance.dir/create_p_h_m_weighted_by_squared_diag_distance.cpp.o -o create_p_h_m_weighted_by_squared_diag_distance -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp [ 27%] Linking CXX executable plot_persistence_heat_map cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps && /usr/bin/cmake -E cmake_link_script CMakeFiles/plot_persistence_heat_map.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/plot_persistence_heat_map.dir/plot_persistence_heat_map.cpp.o -o plot_persistence_heat_map -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 27%] Built target create_p_h_m_weighted_by_squared_diag_distance make -f utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_histogram_of_intervals_lengths.dir/build.make utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_histogram_of_intervals_lengths.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_intervals /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_histogram_of_intervals_lengths.dir/DependInfo.cmake --color= [ 28%] Linking CXX executable create_persistence_heat_maps cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps && /usr/bin/cmake -E cmake_link_script CMakeFiles/create_persistence_heat_maps.dir/link.txt --verbose=1 Scanning dependencies of target plot_histogram_of_intervals_lengths make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_histogram_of_intervals_lengths.dir/build.make utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_histogram_of_intervals_lengths.dir/build /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/create_persistence_heat_maps.dir/create_persistence_heat_maps.cpp.o -o create_persistence_heat_maps -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 28%] Built target plot_persistence_heat_map [ 28%] Built target compute_scalar_product_of_persistence_heat_maps make -f utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_persistence_Betti_numbers.dir/build.make utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_persistence_Betti_numbers.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_intervals /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_persistence_Betti_numbers.dir/DependInfo.cmake --color= make -f utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_birth_death_range_in_persistence_diagram.dir/build.make utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_birth_death_range_in_persistence_diagram.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_intervals /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_birth_death_range_in_persistence_diagram.dir/DependInfo.cmake --color= [ 28%] Building CXX object utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_histogram_of_intervals_lengths.dir/plot_histogram_of_intervals_lengths.cpp.o cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/plot_histogram_of_intervals_lengths.dir/plot_histogram_of_intervals_lengths.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_intervals/plot_histogram_of_intervals_lengths.cpp Scanning dependencies of target plot_persistence_Betti_numbers make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_persistence_Betti_numbers.dir/build.make utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_persistence_Betti_numbers.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' Scanning dependencies of target compute_birth_death_range_in_persistence_diagram make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_birth_death_range_in_persistence_diagram.dir/build.make utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_birth_death_range_in_persistence_diagram.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 28%] Building CXX object utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_persistence_Betti_numbers.dir/plot_persistence_Betti_numbers.cpp.o make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/plot_persistence_Betti_numbers.dir/plot_persistence_Betti_numbers.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_intervals/plot_persistence_Betti_numbers.cpp [ 28%] Building CXX object utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_birth_death_range_in_persistence_diagram.dir/compute_birth_death_range_in_persistence_diagram.cpp.o cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/compute_birth_death_range_in_persistence_diagram.dir/compute_birth_death_range_in_persistence_diagram.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_intervals/compute_birth_death_range_in_persistence_diagram.cpp [ 28%] Built target create_persistence_heat_maps make -f utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_bottleneck_distance.dir/build.make utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_bottleneck_distance.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_intervals /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_bottleneck_distance.dir/DependInfo.cmake --color= Scanning dependencies of target compute_bottleneck_distance make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_bottleneck_distance.dir/build.make utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_bottleneck_distance.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 28%] Building CXX object utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_bottleneck_distance.dir/compute_bottleneck_distance.cpp.o cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/compute_bottleneck_distance.dir/compute_bottleneck_distance.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_intervals/compute_bottleneck_distance.cpp [ 28%] Linking CXX executable RipsContraction cd /build/gudhi-2.3.0+dfsg/build/example/Contraction && /usr/bin/cmake -E cmake_link_script CMakeFiles/RipsContraction.dir/link.txt --verbose=1 [ 28%] Linking CXX executable cech_persistence cd /build/gudhi-2.3.0+dfsg/build/utilities/Cech_complex && /usr/bin/cmake -E cmake_link_script CMakeFiles/cech_persistence.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/RipsContraction.dir/Rips_contraction.cpp.o -o RipsContraction -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/cech_persistence.dir/cech_persistence.cpp.o -o cech_persistence -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -lboost_program_options -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp [ 29%] Linking CXX executable GarlandHeckbert cd /build/gudhi-2.3.0+dfsg/build/example/Contraction && /usr/bin/cmake -E cmake_link_script CMakeFiles/GarlandHeckbert.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/GarlandHeckbert.dir/Garland_heckbert.cpp.o -o GarlandHeckbert -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 29%] Built target RipsContraction make -f utilities/Persistence_representations/persistence_landscapes/CMakeFiles/plot_landscapes.dir/build.make utilities/Persistence_representations/persistence_landscapes/CMakeFiles/plot_landscapes.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes/CMakeFiles/plot_landscapes.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' Scanning dependencies of target plot_landscapes make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_landscapes/CMakeFiles/plot_landscapes.dir/build.make utilities/Persistence_representations/persistence_landscapes/CMakeFiles/plot_landscapes.dir/build [ 29%] Built target GarlandHeckbert make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 29%] Built target cech_persistence make -f utilities/Persistence_representations/persistence_landscapes/CMakeFiles/create_landscapes.dir/build.make utilities/Persistence_representations/persistence_landscapes/CMakeFiles/create_landscapes.dir/depend make -f utilities/Persistence_representations/persistence_landscapes/CMakeFiles/average_landscapes.dir/build.make utilities/Persistence_representations/persistence_landscapes/CMakeFiles/average_landscapes.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes/CMakeFiles/create_landscapes.dir/DependInfo.cmake --color= [ 29%] Building CXX object utilities/Persistence_representations/persistence_landscapes/CMakeFiles/plot_landscapes.dir/plot_landscapes.cpp.o make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes/CMakeFiles/average_landscapes.dir/DependInfo.cmake --color= cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/plot_landscapes.dir/plot_landscapes.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes/plot_landscapes.cpp Scanning dependencies of target create_landscapes make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_landscapes/CMakeFiles/create_landscapes.dir/build.make utilities/Persistence_representations/persistence_landscapes/CMakeFiles/create_landscapes.dir/build Scanning dependencies of target average_landscapes make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_landscapes/CMakeFiles/average_landscapes.dir/build.make utilities/Persistence_representations/persistence_landscapes/CMakeFiles/average_landscapes.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 29%] Building CXX object utilities/Persistence_representations/persistence_landscapes/CMakeFiles/create_landscapes.dir/create_landscapes.cpp.o cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/create_landscapes.dir/create_landscapes.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes/create_landscapes.cpp [ 29%] Building CXX object utilities/Persistence_representations/persistence_landscapes/CMakeFiles/average_landscapes.dir/average_landscapes.cpp.o cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/average_landscapes.dir/average_landscapes.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes/average_landscapes.cpp [ 29%] Linking CXX executable plot_persistence_intervals cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals && /usr/bin/cmake -E cmake_link_script CMakeFiles/plot_persistence_intervals.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/plot_persistence_intervals.dir/plot_persistence_intervals.cpp.o -o plot_persistence_intervals -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 29%] Built target plot_persistence_intervals make -f utilities/Persistence_representations/persistence_landscapes/CMakeFiles/compute_distance_of_landscapes.dir/build.make utilities/Persistence_representations/persistence_landscapes/CMakeFiles/compute_distance_of_landscapes.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes/CMakeFiles/compute_distance_of_landscapes.dir/DependInfo.cmake --color= Scanning dependencies of target compute_distance_of_landscapes make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_landscapes/CMakeFiles/compute_distance_of_landscapes.dir/build.make utilities/Persistence_representations/persistence_landscapes/CMakeFiles/compute_distance_of_landscapes.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 29%] Building CXX object utilities/Persistence_representations/persistence_landscapes/CMakeFiles/compute_distance_of_landscapes.dir/compute_distance_of_landscapes.cpp.o cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/compute_distance_of_landscapes.dir/compute_distance_of_landscapes.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes/compute_distance_of_landscapes.cpp [ 29%] Linking CXX executable compute_number_of_dominant_intervals cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals && /usr/bin/cmake -E cmake_link_script CMakeFiles/compute_number_of_dominant_intervals.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/compute_number_of_dominant_intervals.dir/compute_number_of_dominant_intervals.cpp.o -o compute_number_of_dominant_intervals -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 29%] Built target compute_number_of_dominant_intervals make -f utilities/Persistence_representations/persistence_landscapes/CMakeFiles/compute_scalar_product_of_landscapes.dir/build.make utilities/Persistence_representations/persistence_landscapes/CMakeFiles/compute_scalar_product_of_landscapes.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes/CMakeFiles/compute_scalar_product_of_landscapes.dir/DependInfo.cmake --color= Scanning dependencies of target compute_scalar_product_of_landscapes make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_landscapes/CMakeFiles/compute_scalar_product_of_landscapes.dir/build.make utilities/Persistence_representations/persistence_landscapes/CMakeFiles/compute_scalar_product_of_landscapes.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 30%] Building CXX object utilities/Persistence_representations/persistence_landscapes/CMakeFiles/compute_scalar_product_of_landscapes.dir/compute_scalar_product_of_landscapes.cpp.o cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/compute_scalar_product_of_landscapes.dir/compute_scalar_product_of_landscapes.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes/compute_scalar_product_of_landscapes.cpp [ 31%] Linking CXX executable plot_histogram_of_intervals_lengths cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals && /usr/bin/cmake -E cmake_link_script CMakeFiles/plot_histogram_of_intervals_lengths.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/plot_histogram_of_intervals_lengths.dir/plot_histogram_of_intervals_lengths.cpp.o -o plot_histogram_of_intervals_lengths -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 31%] Built target plot_histogram_of_intervals_lengths make -f utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/plot_landscapes_on_grid.dir/build.make utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/plot_landscapes_on_grid.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes_on_grid /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes_on_grid /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/plot_landscapes_on_grid.dir/DependInfo.cmake --color= Scanning dependencies of target plot_landscapes_on_grid make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/plot_landscapes_on_grid.dir/build.make utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/plot_landscapes_on_grid.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 32%] Linking CXX executable compute_birth_death_range_in_persistence_diagram cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals && /usr/bin/cmake -E cmake_link_script CMakeFiles/compute_birth_death_range_in_persistence_diagram.dir/link.txt --verbose=1 [ 32%] Building CXX object utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/plot_landscapes_on_grid.dir/plot_landscapes_on_grid.cpp.o cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes_on_grid && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/plot_landscapes_on_grid.dir/plot_landscapes_on_grid.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes_on_grid/plot_landscapes_on_grid.cpp /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/compute_birth_death_range_in_persistence_diagram.dir/compute_birth_death_range_in_persistence_diagram.cpp.o -o compute_birth_death_range_in_persistence_diagram -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp [ 33%] Linking CXX executable plot_persistence_Betti_numbers cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals && /usr/bin/cmake -E cmake_link_script CMakeFiles/plot_persistence_Betti_numbers.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/plot_persistence_Betti_numbers.dir/plot_persistence_Betti_numbers.cpp.o -o plot_persistence_Betti_numbers -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 33%] Built target compute_birth_death_range_in_persistence_diagram make -f utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/create_landscapes_on_grid.dir/build.make utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/create_landscapes_on_grid.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes_on_grid /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes_on_grid /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/create_landscapes_on_grid.dir/DependInfo.cmake --color= Scanning dependencies of target create_landscapes_on_grid make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/create_landscapes_on_grid.dir/build.make utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/create_landscapes_on_grid.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 33%] Building CXX object utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/create_landscapes_on_grid.dir/create_landscapes_on_grid.cpp.o cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes_on_grid && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/create_landscapes_on_grid.dir/create_landscapes_on_grid.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes_on_grid/create_landscapes_on_grid.cpp [ 33%] Built target plot_persistence_Betti_numbers make -f utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/compute_distance_of_landscapes_on_grid.dir/build.make utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/compute_distance_of_landscapes_on_grid.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes_on_grid /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes_on_grid /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/compute_distance_of_landscapes_on_grid.dir/DependInfo.cmake --color= Scanning dependencies of target compute_distance_of_landscapes_on_grid make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/compute_distance_of_landscapes_on_grid.dir/build.make utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/compute_distance_of_landscapes_on_grid.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 33%] Building CXX object utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/compute_distance_of_landscapes_on_grid.dir/compute_distance_of_landscapes_on_grid.cpp.o cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes_on_grid && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/compute_distance_of_landscapes_on_grid.dir/compute_distance_of_landscapes_on_grid.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes_on_grid/compute_distance_of_landscapes_on_grid.cpp [ 34%] Linking CXX executable plot_landscapes cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes && /usr/bin/cmake -E cmake_link_script CMakeFiles/plot_landscapes.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/plot_landscapes.dir/plot_landscapes.cpp.o -o plot_landscapes -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp [ 35%] Linking CXX executable create_landscapes cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes && /usr/bin/cmake -E cmake_link_script CMakeFiles/create_landscapes.dir/link.txt --verbose=1 make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/create_landscapes.dir/create_landscapes.cpp.o -o create_landscapes -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp [ 35%] Built target plot_landscapes make -f utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/compute_scalar_product_of_landscapes_on_grid.dir/build.make utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/compute_scalar_product_of_landscapes_on_grid.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes_on_grid /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes_on_grid /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/compute_scalar_product_of_landscapes_on_grid.dir/DependInfo.cmake --color= Scanning dependencies of target compute_scalar_product_of_landscapes_on_grid make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/compute_scalar_product_of_landscapes_on_grid.dir/build.make utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/compute_scalar_product_of_landscapes_on_grid.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 36%] Building CXX object utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/compute_scalar_product_of_landscapes_on_grid.dir/compute_scalar_product_of_landscapes_on_grid.cpp.o cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes_on_grid && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/compute_scalar_product_of_landscapes_on_grid.dir/compute_scalar_product_of_landscapes_on_grid.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes_on_grid/compute_scalar_product_of_landscapes_on_grid.cpp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 36%] Built target create_landscapes make -f utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/average_landscapes_on_grid.dir/build.make utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/average_landscapes_on_grid.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes_on_grid /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes_on_grid /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/average_landscapes_on_grid.dir/DependInfo.cmake --color= Scanning dependencies of target average_landscapes_on_grid make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/average_landscapes_on_grid.dir/build.make utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/average_landscapes_on_grid.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 36%] Building CXX object utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/average_landscapes_on_grid.dir/average_landscapes_on_grid.cpp.o cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes_on_grid && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/average_landscapes_on_grid.dir/average_landscapes_on_grid.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes_on_grid/average_landscapes_on_grid.cpp [ 37%] Linking CXX executable average_landscapes cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes && /usr/bin/cmake -E cmake_link_script CMakeFiles/average_landscapes.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/average_landscapes.dir/average_landscapes.cpp.o -o average_landscapes -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 37%] Built target average_landscapes make -f utilities/Persistence_representations/persistence_vectors/CMakeFiles/plot_persistence_vectors.dir/build.make utilities/Persistence_representations/persistence_vectors/CMakeFiles/plot_persistence_vectors.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_vectors /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_vectors /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_vectors/CMakeFiles/plot_persistence_vectors.dir/DependInfo.cmake --color= Scanning dependencies of target plot_persistence_vectors make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_vectors/CMakeFiles/plot_persistence_vectors.dir/build.make utilities/Persistence_representations/persistence_vectors/CMakeFiles/plot_persistence_vectors.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 38%] Building CXX object utilities/Persistence_representations/persistence_vectors/CMakeFiles/plot_persistence_vectors.dir/plot_persistence_vectors.cpp.o cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_vectors && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/plot_persistence_vectors.dir/plot_persistence_vectors.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_vectors/plot_persistence_vectors.cpp [ 39%] Linking CXX executable compute_distance_of_landscapes cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes && /usr/bin/cmake -E cmake_link_script CMakeFiles/compute_distance_of_landscapes.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/compute_distance_of_landscapes.dir/compute_distance_of_landscapes.cpp.o -o compute_distance_of_landscapes -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 39%] Built target compute_distance_of_landscapes make -f utilities/Persistence_representations/persistence_vectors/CMakeFiles/create_persistence_vectors.dir/build.make utilities/Persistence_representations/persistence_vectors/CMakeFiles/create_persistence_vectors.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_vectors /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_vectors /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_vectors/CMakeFiles/create_persistence_vectors.dir/DependInfo.cmake --color= [ 39%] Linking CXX executable compute_scalar_product_of_landscapes Scanning dependencies of target create_persistence_vectors cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes && /usr/bin/cmake -E cmake_link_script CMakeFiles/compute_scalar_product_of_landscapes.dir/link.txt --verbose=1 make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_vectors/CMakeFiles/create_persistence_vectors.dir/build.make utilities/Persistence_representations/persistence_vectors/CMakeFiles/create_persistence_vectors.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/compute_scalar_product_of_landscapes.dir/compute_scalar_product_of_landscapes.cpp.o -o compute_scalar_product_of_landscapes -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp [ 39%] Building CXX object utilities/Persistence_representations/persistence_vectors/CMakeFiles/create_persistence_vectors.dir/create_persistence_vectors.cpp.o cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_vectors && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/create_persistence_vectors.dir/create_persistence_vectors.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_vectors/create_persistence_vectors.cpp [ 40%] Linking CXX executable plot_landscapes_on_grid make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes_on_grid && /usr/bin/cmake -E cmake_link_script CMakeFiles/plot_landscapes_on_grid.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/plot_landscapes_on_grid.dir/plot_landscapes_on_grid.cpp.o -o plot_landscapes_on_grid -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp [ 40%] Built target compute_scalar_product_of_landscapes make -f utilities/Persistence_representations/persistence_vectors/CMakeFiles/average_persistence_vectors.dir/build.make utilities/Persistence_representations/persistence_vectors/CMakeFiles/average_persistence_vectors.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_vectors /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_vectors /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_vectors/CMakeFiles/average_persistence_vectors.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' Scanning dependencies of target average_persistence_vectors make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_vectors/CMakeFiles/average_persistence_vectors.dir/build.make utilities/Persistence_representations/persistence_vectors/CMakeFiles/average_persistence_vectors.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 40%] Built target plot_landscapes_on_grid make -f utilities/Persistence_representations/persistence_vectors/CMakeFiles/compute_distance_of_persistence_vectors.dir/build.make utilities/Persistence_representations/persistence_vectors/CMakeFiles/compute_distance_of_persistence_vectors.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_vectors /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_vectors /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_vectors/CMakeFiles/compute_distance_of_persistence_vectors.dir/DependInfo.cmake --color= [ 41%] Building CXX object utilities/Persistence_representations/persistence_vectors/CMakeFiles/average_persistence_vectors.dir/average_persistence_vectors.cpp.o cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_vectors && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/average_persistence_vectors.dir/average_persistence_vectors.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_vectors/average_persistence_vectors.cpp Scanning dependencies of target compute_distance_of_persistence_vectors make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_vectors/CMakeFiles/compute_distance_of_persistence_vectors.dir/build.make utilities/Persistence_representations/persistence_vectors/CMakeFiles/compute_distance_of_persistence_vectors.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 41%] Building CXX object utilities/Persistence_representations/persistence_vectors/CMakeFiles/compute_distance_of_persistence_vectors.dir/compute_distance_of_persistence_vectors.cpp.o cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_vectors && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/compute_distance_of_persistence_vectors.dir/compute_distance_of_persistence_vectors.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_vectors/compute_distance_of_persistence_vectors.cpp [ 42%] Linking CXX executable create_landscapes_on_grid cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes_on_grid && /usr/bin/cmake -E cmake_link_script CMakeFiles/create_landscapes_on_grid.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/create_landscapes_on_grid.dir/create_landscapes_on_grid.cpp.o -o create_landscapes_on_grid -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 42%] Built target create_landscapes_on_grid make -f utilities/Persistence_representations/persistence_vectors/CMakeFiles/compute_scalar_product_of_persistence_vectors.dir/build.make utilities/Persistence_representations/persistence_vectors/CMakeFiles/compute_scalar_product_of_persistence_vectors.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_vectors /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_vectors /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_vectors/CMakeFiles/compute_scalar_product_of_persistence_vectors.dir/DependInfo.cmake --color= Scanning dependencies of target compute_scalar_product_of_persistence_vectors make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_vectors/CMakeFiles/compute_scalar_product_of_persistence_vectors.dir/build.make utilities/Persistence_representations/persistence_vectors/CMakeFiles/compute_scalar_product_of_persistence_vectors.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 43%] Building CXX object utilities/Persistence_representations/persistence_vectors/CMakeFiles/compute_scalar_product_of_persistence_vectors.dir/compute_scalar_product_of_persistence_vectors.cpp.o cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_vectors && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/compute_scalar_product_of_persistence_vectors.dir/compute_scalar_product_of_persistence_vectors.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_vectors/compute_scalar_product_of_persistence_vectors.cpp [ 44%] Linking CXX executable compute_distance_of_landscapes_on_grid cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes_on_grid && /usr/bin/cmake -E cmake_link_script CMakeFiles/compute_distance_of_landscapes_on_grid.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/compute_distance_of_landscapes_on_grid.dir/compute_distance_of_landscapes_on_grid.cpp.o -o compute_distance_of_landscapes_on_grid -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 44%] Built target compute_distance_of_landscapes_on_grid make -f example/Persistent_cohomology/CMakeFiles/custom_persistence_sort.dir/build.make example/Persistent_cohomology/CMakeFiles/custom_persistence_sort.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Persistent_cohomology /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology/CMakeFiles/custom_persistence_sort.dir/DependInfo.cmake --color= Scanning dependencies of target custom_persistence_sort make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Persistent_cohomology/CMakeFiles/custom_persistence_sort.dir/build.make example/Persistent_cohomology/CMakeFiles/custom_persistence_sort.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 45%] Building CXX object example/Persistent_cohomology/CMakeFiles/custom_persistence_sort.dir/custom_persistence_sort.cpp.o cd /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/custom_persistence_sort.dir/custom_persistence_sort.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Persistent_cohomology/custom_persistence_sort.cpp [ 45%] Linking CXX executable plot_persistence_vectors cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_vectors && /usr/bin/cmake -E cmake_link_script CMakeFiles/plot_persistence_vectors.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/plot_persistence_vectors.dir/plot_persistence_vectors.cpp.o -o plot_persistence_vectors -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 45%] Built target plot_persistence_vectors make -f example/Persistent_cohomology/CMakeFiles/persistence_from_simple_simplex_tree.dir/build.make example/Persistent_cohomology/CMakeFiles/persistence_from_simple_simplex_tree.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Persistent_cohomology /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology/CMakeFiles/persistence_from_simple_simplex_tree.dir/DependInfo.cmake --color= Scanning dependencies of target persistence_from_simple_simplex_tree make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Persistent_cohomology/CMakeFiles/persistence_from_simple_simplex_tree.dir/build.make example/Persistent_cohomology/CMakeFiles/persistence_from_simple_simplex_tree.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 46%] Building CXX object example/Persistent_cohomology/CMakeFiles/persistence_from_simple_simplex_tree.dir/persistence_from_simple_simplex_tree.cpp.o cd /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/persistence_from_simple_simplex_tree.dir/persistence_from_simple_simplex_tree.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Persistent_cohomology/persistence_from_simple_simplex_tree.cpp [ 47%] Linking CXX executable compute_bottleneck_distance cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals && /usr/bin/cmake -E cmake_link_script CMakeFiles/compute_bottleneck_distance.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/compute_bottleneck_distance.dir/compute_bottleneck_distance.cpp.o -o compute_bottleneck_distance -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp [ 48%] Linking CXX executable average_landscapes_on_grid cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes_on_grid && /usr/bin/cmake -E cmake_link_script CMakeFiles/average_landscapes_on_grid.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/average_landscapes_on_grid.dir/average_landscapes_on_grid.cpp.o -o average_landscapes_on_grid -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 48%] Built target compute_bottleneck_distance make -f example/Persistent_cohomology/CMakeFiles/rips_persistence_step_by_step.dir/build.make example/Persistent_cohomology/CMakeFiles/rips_persistence_step_by_step.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Persistent_cohomology /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology/CMakeFiles/rips_persistence_step_by_step.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' Scanning dependencies of target rips_persistence_step_by_step make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Persistent_cohomology/CMakeFiles/rips_persistence_step_by_step.dir/build.make example/Persistent_cohomology/CMakeFiles/rips_persistence_step_by_step.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 48%] Built target average_landscapes_on_grid make -f example/Persistent_cohomology/CMakeFiles/rips_multifield_persistence.dir/build.make example/Persistent_cohomology/CMakeFiles/rips_multifield_persistence.dir/depend [ 50%] Building CXX object example/Persistent_cohomology/CMakeFiles/rips_persistence_step_by_step.dir/rips_persistence_step_by_step.cpp.o make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Persistent_cohomology /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology/CMakeFiles/rips_multifield_persistence.dir/DependInfo.cmake --color= cd /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/rips_persistence_step_by_step.dir/rips_persistence_step_by_step.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Persistent_cohomology/rips_persistence_step_by_step.cpp Scanning dependencies of target rips_multifield_persistence make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Persistent_cohomology/CMakeFiles/rips_multifield_persistence.dir/build.make example/Persistent_cohomology/CMakeFiles/rips_multifield_persistence.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 51%] Building CXX object example/Persistent_cohomology/CMakeFiles/rips_multifield_persistence.dir/rips_multifield_persistence.cpp.o cd /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/rips_multifield_persistence.dir/rips_multifield_persistence.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Persistent_cohomology/rips_multifield_persistence.cpp [ 51%] Linking CXX executable compute_scalar_product_of_landscapes_on_grid cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes_on_grid && /usr/bin/cmake -E cmake_link_script CMakeFiles/compute_scalar_product_of_landscapes_on_grid.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/compute_scalar_product_of_landscapes_on_grid.dir/compute_scalar_product_of_landscapes_on_grid.cpp.o -o compute_scalar_product_of_landscapes_on_grid -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp In file included from /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_vectors/average_persistence_vectors.cpp:23: /build/gudhi-2.3.0+dfsg/include/gudhi/Persistence_vectors.h: In member function 'void Gudhi::Persistence_representations::Vector_distances_in_diagram::compute_average(const std::vector*>&) [with F = Gudhi::Euclidean_distance]': /build/gudhi-2.3.0+dfsg/include/gudhi/Persistence_vectors.h:66:7: warning: '.Gudhi::Persistence_representations::Vector_distances_in_diagram::number_of_functions_for_vectorization' may be used uninitialized in this function [-Wmaybe-uninitialized] class Vector_distances_in_diagram { ^~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gudhi-2.3.0+dfsg/include/gudhi/Persistence_vectors.h:66:7: warning: '.Gudhi::Persistence_representations::Vector_distances_in_diagram::number_of_functions_for_projections_to_reals' may be used uninitialized in this function [-Wmaybe-uninitialized] /build/gudhi-2.3.0+dfsg/include/gudhi/Persistence_vectors.h:66:7: warning: '.Gudhi::Persistence_representations::Vector_distances_in_diagram::where_to_cut' may be used uninitialized in this function [-Wmaybe-uninitialized] make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 51%] Built target compute_scalar_product_of_landscapes_on_grid make -f example/Persistent_cohomology/CMakeFiles/plain_homology.dir/build.make example/Persistent_cohomology/CMakeFiles/plain_homology.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Persistent_cohomology /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology/CMakeFiles/plain_homology.dir/DependInfo.cmake --color= Scanning dependencies of target plain_homology make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Persistent_cohomology/CMakeFiles/plain_homology.dir/build.make example/Persistent_cohomology/CMakeFiles/plain_homology.dir/build [ 51%] Linking CXX executable create_persistence_vectors cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_vectors && /usr/bin/cmake -E cmake_link_script CMakeFiles/create_persistence_vectors.dir/link.txt --verbose=1 make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 52%] Building CXX object example/Persistent_cohomology/CMakeFiles/plain_homology.dir/plain_homology.cpp.o cd /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/plain_homology.dir/plain_homology.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Persistent_cohomology/plain_homology.cpp /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/create_persistence_vectors.dir/create_persistence_vectors.cpp.o -o create_persistence_vectors -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 52%] Built target create_persistence_vectors make -f example/Persistent_cohomology/CMakeFiles/rips_persistence_via_boundary_matrix.dir/build.make example/Persistent_cohomology/CMakeFiles/rips_persistence_via_boundary_matrix.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Persistent_cohomology /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology/CMakeFiles/rips_persistence_via_boundary_matrix.dir/DependInfo.cmake --color= Scanning dependencies of target rips_persistence_via_boundary_matrix make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Persistent_cohomology/CMakeFiles/rips_persistence_via_boundary_matrix.dir/build.make example/Persistent_cohomology/CMakeFiles/rips_persistence_via_boundary_matrix.dir/build [ 52%] Linking CXX executable average_persistence_vectors cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_vectors && /usr/bin/cmake -E cmake_link_script CMakeFiles/average_persistence_vectors.dir/link.txt --verbose=1 make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 52%] Building CXX object example/Persistent_cohomology/CMakeFiles/rips_persistence_via_boundary_matrix.dir/rips_persistence_via_boundary_matrix.cpp.o cd /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/rips_persistence_via_boundary_matrix.dir/rips_persistence_via_boundary_matrix.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Persistent_cohomology/rips_persistence_via_boundary_matrix.cpp /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/average_persistence_vectors.dir/average_persistence_vectors.cpp.o -o average_persistence_vectors -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 52%] Built target average_persistence_vectors make -f example/Persistent_cohomology/CMakeFiles/persistence_from_file.dir/build.make example/Persistent_cohomology/CMakeFiles/persistence_from_file.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Persistent_cohomology /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology/CMakeFiles/persistence_from_file.dir/DependInfo.cmake --color= Scanning dependencies of target persistence_from_file make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Persistent_cohomology/CMakeFiles/persistence_from_file.dir/build.make example/Persistent_cohomology/CMakeFiles/persistence_from_file.dir/build [ 52%] Linking CXX executable compute_distance_of_persistence_vectors cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_vectors && /usr/bin/cmake -E cmake_link_script CMakeFiles/compute_distance_of_persistence_vectors.dir/link.txt --verbose=1 make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/compute_distance_of_persistence_vectors.dir/compute_distance_of_persistence_vectors.cpp.o -o compute_distance_of_persistence_vectors -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp [ 53%] Building CXX object example/Persistent_cohomology/CMakeFiles/persistence_from_file.dir/persistence_from_file.cpp.o cd /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/persistence_from_file.dir/persistence_from_file.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Persistent_cohomology/persistence_from_file.cpp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 53%] Built target compute_distance_of_persistence_vectors make -f example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_from_points.dir/build.make example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_from_points.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Rips_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Rips_complex /build/gudhi-2.3.0+dfsg/build/example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_from_points.dir/DependInfo.cmake --color= Scanning dependencies of target Rips_complex_example_one_skeleton_from_points make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_from_points.dir/build.make example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_from_points.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 54%] Building CXX object example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_from_points.dir/example_one_skeleton_rips_from_points.cpp.o cd /build/gudhi-2.3.0+dfsg/build/example/Rips_complex && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/Rips_complex_example_one_skeleton_from_points.dir/example_one_skeleton_rips_from_points.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Rips_complex/example_one_skeleton_rips_from_points.cpp [ 55%] Linking CXX executable alpha_complex_3d_persistence cd /build/gudhi-2.3.0+dfsg/build/utilities/Alpha_complex && /usr/bin/cmake -E cmake_link_script CMakeFiles/alpha_complex_3d_persistence.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/alpha_complex_3d_persistence.dir/alpha_complex_3d_persistence.cpp.o -o alpha_complex_3d_persistence -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -lboost_program_options -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp [ 55%] Linking CXX executable compute_scalar_product_of_persistence_vectors cd /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_vectors && /usr/bin/cmake -E cmake_link_script CMakeFiles/compute_scalar_product_of_persistence_vectors.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/compute_scalar_product_of_persistence_vectors.dir/compute_scalar_product_of_persistence_vectors.cpp.o -o compute_scalar_product_of_persistence_vectors -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 55%] Built target alpha_complex_3d_persistence make -f example/Rips_complex/CMakeFiles/Rips_complex_example_sparse.dir/build.make example/Rips_complex/CMakeFiles/Rips_complex_example_sparse.dir/depend make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Rips_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Rips_complex /build/gudhi-2.3.0+dfsg/build/example/Rips_complex/CMakeFiles/Rips_complex_example_sparse.dir/DependInfo.cmake --color= [ 55%] Built target compute_scalar_product_of_persistence_vectors make -f example/Rips_complex/CMakeFiles/Rips_complex_example_from_off.dir/build.make example/Rips_complex/CMakeFiles/Rips_complex_example_from_off.dir/depend Scanning dependencies of target Rips_complex_example_sparse make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Rips_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Rips_complex /build/gudhi-2.3.0+dfsg/build/example/Rips_complex/CMakeFiles/Rips_complex_example_from_off.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Rips_complex/CMakeFiles/Rips_complex_example_sparse.dir/build.make example/Rips_complex/CMakeFiles/Rips_complex_example_sparse.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 55%] Building CXX object example/Rips_complex/CMakeFiles/Rips_complex_example_sparse.dir/example_sparse_rips.cpp.o Scanning dependencies of target Rips_complex_example_from_off cd /build/gudhi-2.3.0+dfsg/build/example/Rips_complex && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/Rips_complex_example_sparse.dir/example_sparse_rips.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Rips_complex/example_sparse_rips.cpp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Rips_complex/CMakeFiles/Rips_complex_example_from_off.dir/build.make example/Rips_complex/CMakeFiles/Rips_complex_example_from_off.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 56%] Building CXX object example/Rips_complex/CMakeFiles/Rips_complex_example_from_off.dir/example_rips_complex_from_off_file.cpp.o cd /build/gudhi-2.3.0+dfsg/build/example/Rips_complex && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/Rips_complex_example_from_off.dir/example_rips_complex_from_off_file.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Rips_complex/example_rips_complex_from_off_file.cpp [ 56%] Linking CXX executable exact_alpha_complex_3d_persistence cd /build/gudhi-2.3.0+dfsg/build/utilities/Alpha_complex && /usr/bin/cmake -E cmake_link_script CMakeFiles/exact_alpha_complex_3d_persistence.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/exact_alpha_complex_3d_persistence.dir/exact_alpha_complex_3d_persistence.cpp.o -o exact_alpha_complex_3d_persistence -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -lboost_program_options -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 56%] Built target exact_alpha_complex_3d_persistence make -f example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_from_distance_matrix.dir/build.make example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_from_distance_matrix.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Rips_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Rips_complex /build/gudhi-2.3.0+dfsg/build/example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_from_distance_matrix.dir/DependInfo.cmake --color= Scanning dependencies of target Rips_complex_example_one_skeleton_from_distance_matrix make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_from_distance_matrix.dir/build.make example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_from_distance_matrix.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 57%] Building CXX object example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_from_distance_matrix.dir/example_one_skeleton_rips_from_distance_matrix.cpp.o cd /build/gudhi-2.3.0+dfsg/build/example/Rips_complex && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/Rips_complex_example_one_skeleton_from_distance_matrix.dir/example_one_skeleton_rips_from_distance_matrix.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Rips_complex/example_one_skeleton_rips_from_distance_matrix.cpp [ 58%] Linking CXX executable weighted_alpha_complex_3d_persistence cd /build/gudhi-2.3.0+dfsg/build/utilities/Alpha_complex && /usr/bin/cmake -E cmake_link_script CMakeFiles/weighted_alpha_complex_3d_persistence.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/weighted_alpha_complex_3d_persistence.dir/weighted_alpha_complex_3d_persistence.cpp.o -o weighted_alpha_complex_3d_persistence -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -lboost_program_options -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 58%] Built target weighted_alpha_complex_3d_persistence make -f example/Rips_complex/CMakeFiles/Rips_complex_example_from_csv_distance_matrix.dir/build.make example/Rips_complex/CMakeFiles/Rips_complex_example_from_csv_distance_matrix.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Rips_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Rips_complex /build/gudhi-2.3.0+dfsg/build/example/Rips_complex/CMakeFiles/Rips_complex_example_from_csv_distance_matrix.dir/DependInfo.cmake --color= Scanning dependencies of target Rips_complex_example_from_csv_distance_matrix make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Rips_complex/CMakeFiles/Rips_complex_example_from_csv_distance_matrix.dir/build.make example/Rips_complex/CMakeFiles/Rips_complex_example_from_csv_distance_matrix.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 59%] Building CXX object example/Rips_complex/CMakeFiles/Rips_complex_example_from_csv_distance_matrix.dir/example_rips_complex_from_csv_distance_matrix_file.cpp.o cd /build/gudhi-2.3.0+dfsg/build/example/Rips_complex && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/Rips_complex_example_from_csv_distance_matrix.dir/example_rips_complex_from_csv_distance_matrix_file.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Rips_complex/example_rips_complex_from_csv_distance_matrix_file.cpp [ 60%] Linking CXX executable Rips_complex_example_sparse cd /build/gudhi-2.3.0+dfsg/build/example/Rips_complex && /usr/bin/cmake -E cmake_link_script CMakeFiles/Rips_complex_example_sparse.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Rips_complex_example_sparse.dir/example_sparse_rips.cpp.o -o Rips_complex_example_sparse -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 60%] Built target Rips_complex_example_sparse make -f example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_rips_from_correlation_matrix.dir/build.make example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_rips_from_correlation_matrix.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Rips_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Rips_complex /build/gudhi-2.3.0+dfsg/build/example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_rips_from_correlation_matrix.dir/DependInfo.cmake --color= Scanning dependencies of target Rips_complex_example_one_skeleton_rips_from_correlation_matrix make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_rips_from_correlation_matrix.dir/build.make example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_rips_from_correlation_matrix.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 60%] Building CXX object example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_rips_from_correlation_matrix.dir/example_one_skeleton_rips_from_correlation_matrix.cpp.o cd /build/gudhi-2.3.0+dfsg/build/example/Rips_complex && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/Rips_complex_example_one_skeleton_rips_from_correlation_matrix.dir/example_one_skeleton_rips_from_correlation_matrix.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Rips_complex/example_one_skeleton_rips_from_correlation_matrix.cpp [ 60%] Linking CXX executable Rips_complex_example_one_skeleton_from_points cd /build/gudhi-2.3.0+dfsg/build/example/Rips_complex && /usr/bin/cmake -E cmake_link_script CMakeFiles/Rips_complex_example_one_skeleton_from_points.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Rips_complex_example_one_skeleton_from_points.dir/example_one_skeleton_rips_from_points.cpp.o -o Rips_complex_example_one_skeleton_from_points -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 60%] Built target Rips_complex_example_one_skeleton_from_points make -f utilities/Rips_complex/CMakeFiles/rips_distance_matrix_persistence.dir/build.make utilities/Rips_complex/CMakeFiles/rips_distance_matrix_persistence.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Rips_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Rips_complex /build/gudhi-2.3.0+dfsg/build/utilities/Rips_complex/CMakeFiles/rips_distance_matrix_persistence.dir/DependInfo.cmake --color= Scanning dependencies of target rips_distance_matrix_persistence make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Rips_complex/CMakeFiles/rips_distance_matrix_persistence.dir/build.make utilities/Rips_complex/CMakeFiles/rips_distance_matrix_persistence.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 61%] Building CXX object utilities/Rips_complex/CMakeFiles/rips_distance_matrix_persistence.dir/rips_distance_matrix_persistence.cpp.o cd /build/gudhi-2.3.0+dfsg/build/utilities/Rips_complex && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/rips_distance_matrix_persistence.dir/rips_distance_matrix_persistence.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Rips_complex/rips_distance_matrix_persistence.cpp [ 61%] Linking CXX executable persistence_from_simple_simplex_tree cd /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology && /usr/bin/cmake -E cmake_link_script CMakeFiles/persistence_from_simple_simplex_tree.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/persistence_from_simple_simplex_tree.dir/persistence_from_simple_simplex_tree.cpp.o -o persistence_from_simple_simplex_tree -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 61%] Built target persistence_from_simple_simplex_tree make -f utilities/Rips_complex/CMakeFiles/sparse_rips_persistence.dir/build.make utilities/Rips_complex/CMakeFiles/sparse_rips_persistence.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Rips_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Rips_complex /build/gudhi-2.3.0+dfsg/build/utilities/Rips_complex/CMakeFiles/sparse_rips_persistence.dir/DependInfo.cmake --color= Scanning dependencies of target sparse_rips_persistence make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Rips_complex/CMakeFiles/sparse_rips_persistence.dir/build.make utilities/Rips_complex/CMakeFiles/sparse_rips_persistence.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 61%] Building CXX object utilities/Rips_complex/CMakeFiles/sparse_rips_persistence.dir/sparse_rips_persistence.cpp.o cd /build/gudhi-2.3.0+dfsg/build/utilities/Rips_complex && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/sparse_rips_persistence.dir/sparse_rips_persistence.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Rips_complex/sparse_rips_persistence.cpp [ 61%] Linking CXX executable Rips_complex_example_from_off cd /build/gudhi-2.3.0+dfsg/build/example/Rips_complex && /usr/bin/cmake -E cmake_link_script CMakeFiles/Rips_complex_example_from_off.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Rips_complex_example_from_off.dir/example_rips_complex_from_off_file.cpp.o -o Rips_complex_example_from_off -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp [ 61%] Linking CXX executable Alpha_complex_example_from_off cd /build/gudhi-2.3.0+dfsg/build/example/Alpha_complex && /usr/bin/cmake -E cmake_link_script CMakeFiles/Alpha_complex_example_from_off.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Alpha_complex_example_from_off.dir/Alpha_complex_from_off.cpp.o -o Alpha_complex_example_from_off -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 61%] Built target Rips_complex_example_from_off make -f utilities/Rips_complex/CMakeFiles/rips_persistence.dir/build.make utilities/Rips_complex/CMakeFiles/rips_persistence.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Rips_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Rips_complex /build/gudhi-2.3.0+dfsg/build/utilities/Rips_complex/CMakeFiles/rips_persistence.dir/DependInfo.cmake --color= Scanning dependencies of target rips_persistence make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Rips_complex/CMakeFiles/rips_persistence.dir/build.make utilities/Rips_complex/CMakeFiles/rips_persistence.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 62%] Building CXX object utilities/Rips_complex/CMakeFiles/rips_persistence.dir/rips_persistence.cpp.o cd /build/gudhi-2.3.0+dfsg/build/utilities/Rips_complex && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/rips_persistence.dir/rips_persistence.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Rips_complex/rips_persistence.cpp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 62%] Linking CXX executable Rips_complex_example_one_skeleton_from_distance_matrix cd /build/gudhi-2.3.0+dfsg/build/example/Rips_complex && /usr/bin/cmake -E cmake_link_script CMakeFiles/Rips_complex_example_one_skeleton_from_distance_matrix.dir/link.txt --verbose=1 [ 62%] Built target Alpha_complex_example_from_off make -f utilities/Rips_complex/CMakeFiles/rips_correlation_matrix_persistence.dir/build.make utilities/Rips_complex/CMakeFiles/rips_correlation_matrix_persistence.dir/depend /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Rips_complex_example_one_skeleton_from_distance_matrix.dir/example_one_skeleton_rips_from_distance_matrix.cpp.o -o Rips_complex_example_one_skeleton_from_distance_matrix -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Rips_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Rips_complex /build/gudhi-2.3.0+dfsg/build/utilities/Rips_complex/CMakeFiles/rips_correlation_matrix_persistence.dir/DependInfo.cmake --color= Scanning dependencies of target rips_correlation_matrix_persistence make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Rips_complex/CMakeFiles/rips_correlation_matrix_persistence.dir/build.make utilities/Rips_complex/CMakeFiles/rips_correlation_matrix_persistence.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 63%] Building CXX object utilities/Rips_complex/CMakeFiles/rips_correlation_matrix_persistence.dir/rips_correlation_matrix_persistence.cpp.o cd /build/gudhi-2.3.0+dfsg/build/utilities/Rips_complex && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/rips_correlation_matrix_persistence.dir/rips_correlation_matrix_persistence.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Rips_complex/rips_correlation_matrix_persistence.cpp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 63%] Built target Rips_complex_example_one_skeleton_from_distance_matrix make -f example/Simplex_tree/CMakeFiles/Simplex_tree_example_from_cliques_of_graph.dir/build.make example/Simplex_tree/CMakeFiles/Simplex_tree_example_from_cliques_of_graph.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Simplex_tree /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree/CMakeFiles/Simplex_tree_example_from_cliques_of_graph.dir/DependInfo.cmake --color= Scanning dependencies of target Simplex_tree_example_from_cliques_of_graph make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Simplex_tree/CMakeFiles/Simplex_tree_example_from_cliques_of_graph.dir/build.make example/Simplex_tree/CMakeFiles/Simplex_tree_example_from_cliques_of_graph.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 63%] Building CXX object example/Simplex_tree/CMakeFiles/Simplex_tree_example_from_cliques_of_graph.dir/simplex_tree_from_cliques_of_graph.cpp.o cd /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/Simplex_tree_example_from_cliques_of_graph.dir/simplex_tree_from_cliques_of_graph.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Simplex_tree/simplex_tree_from_cliques_of_graph.cpp [ 63%] Linking CXX executable plain_homology cd /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology && /usr/bin/cmake -E cmake_link_script CMakeFiles/plain_homology.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/plain_homology.dir/plain_homology.cpp.o -o plain_homology -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 63%] Built target plain_homology make -f example/Simplex_tree/CMakeFiles/Simplex_tree_example_simple_simplex_tree.dir/build.make example/Simplex_tree/CMakeFiles/Simplex_tree_example_simple_simplex_tree.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Simplex_tree /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree/CMakeFiles/Simplex_tree_example_simple_simplex_tree.dir/DependInfo.cmake --color= Scanning dependencies of target Simplex_tree_example_simple_simplex_tree make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Simplex_tree/CMakeFiles/Simplex_tree_example_simple_simplex_tree.dir/build.make example/Simplex_tree/CMakeFiles/Simplex_tree_example_simple_simplex_tree.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 64%] Building CXX object example/Simplex_tree/CMakeFiles/Simplex_tree_example_simple_simplex_tree.dir/simple_simplex_tree.cpp.o cd /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/Simplex_tree_example_simple_simplex_tree.dir/simple_simplex_tree.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Simplex_tree/simple_simplex_tree.cpp [ 64%] Linking CXX executable Rips_complex_example_from_csv_distance_matrix cd /build/gudhi-2.3.0+dfsg/build/example/Rips_complex && /usr/bin/cmake -E cmake_link_script CMakeFiles/Rips_complex_example_from_csv_distance_matrix.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Rips_complex_example_from_csv_distance_matrix.dir/example_rips_complex_from_csv_distance_matrix_file.cpp.o -o Rips_complex_example_from_csv_distance_matrix -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 64%] Built target Rips_complex_example_from_csv_distance_matrix make -f example/Simplex_tree/CMakeFiles/Simplex_tree_example_mini_simplex_tree.dir/build.make example/Simplex_tree/CMakeFiles/Simplex_tree_example_mini_simplex_tree.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Simplex_tree /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree/CMakeFiles/Simplex_tree_example_mini_simplex_tree.dir/DependInfo.cmake --color= Scanning dependencies of target Simplex_tree_example_mini_simplex_tree make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Simplex_tree/CMakeFiles/Simplex_tree_example_mini_simplex_tree.dir/build.make example/Simplex_tree/CMakeFiles/Simplex_tree_example_mini_simplex_tree.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 65%] Building CXX object example/Simplex_tree/CMakeFiles/Simplex_tree_example_mini_simplex_tree.dir/mini_simplex_tree.cpp.o cd /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/Simplex_tree_example_mini_simplex_tree.dir/mini_simplex_tree.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Simplex_tree/mini_simplex_tree.cpp [ 65%] Linking CXX executable persistence_from_file cd /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology && /usr/bin/cmake -E cmake_link_script CMakeFiles/persistence_from_file.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/persistence_from_file.dir/persistence_from_file.cpp.o -o persistence_from_file -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -lboost_program_options -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 65%] Built target persistence_from_file make -f example/Simplex_tree/CMakeFiles/Simplex_tree_example_graph_expansion_with_blocker.dir/build.make example/Simplex_tree/CMakeFiles/Simplex_tree_example_graph_expansion_with_blocker.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Simplex_tree /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree/CMakeFiles/Simplex_tree_example_graph_expansion_with_blocker.dir/DependInfo.cmake --color= Scanning dependencies of target Simplex_tree_example_graph_expansion_with_blocker make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Simplex_tree/CMakeFiles/Simplex_tree_example_graph_expansion_with_blocker.dir/build.make example/Simplex_tree/CMakeFiles/Simplex_tree_example_graph_expansion_with_blocker.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 65%] Building CXX object example/Simplex_tree/CMakeFiles/Simplex_tree_example_graph_expansion_with_blocker.dir/graph_expansion_with_blocker.cpp.o cd /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/Simplex_tree_example_graph_expansion_with_blocker.dir/graph_expansion_with_blocker.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Simplex_tree/graph_expansion_with_blocker.cpp [ 66%] Linking CXX executable Rips_complex_example_one_skeleton_rips_from_correlation_matrix cd /build/gudhi-2.3.0+dfsg/build/example/Rips_complex && /usr/bin/cmake -E cmake_link_script CMakeFiles/Rips_complex_example_one_skeleton_rips_from_correlation_matrix.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Rips_complex_example_one_skeleton_rips_from_correlation_matrix.dir/example_one_skeleton_rips_from_correlation_matrix.cpp.o -o Rips_complex_example_one_skeleton_rips_from_correlation_matrix -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp [ 66%] Linking CXX executable periodic_alpha_complex_3d_persistence cd /build/gudhi-2.3.0+dfsg/build/utilities/Alpha_complex && /usr/bin/cmake -E cmake_link_script CMakeFiles/periodic_alpha_complex_3d_persistence.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/periodic_alpha_complex_3d_persistence.dir/periodic_alpha_complex_3d_persistence.cpp.o -o periodic_alpha_complex_3d_persistence -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -lboost_program_options -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 66%] Built target Rips_complex_example_one_skeleton_rips_from_correlation_matrix make -f example/Simplex_tree/CMakeFiles/Simplex_tree_example_alpha_shapes_3_from_off.dir/build.make example/Simplex_tree/CMakeFiles/Simplex_tree_example_alpha_shapes_3_from_off.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Simplex_tree /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree/CMakeFiles/Simplex_tree_example_alpha_shapes_3_from_off.dir/DependInfo.cmake --color= Scanning dependencies of target Simplex_tree_example_alpha_shapes_3_from_off make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Simplex_tree/CMakeFiles/Simplex_tree_example_alpha_shapes_3_from_off.dir/build.make example/Simplex_tree/CMakeFiles/Simplex_tree_example_alpha_shapes_3_from_off.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 66%] Building CXX object example/Simplex_tree/CMakeFiles/Simplex_tree_example_alpha_shapes_3_from_off.dir/example_alpha_shapes_3_simplex_tree_from_off_file.cpp.o cd /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/Simplex_tree_example_alpha_shapes_3_from_off.dir/example_alpha_shapes_3_simplex_tree_from_off_file.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Simplex_tree/example_alpha_shapes_3_simplex_tree_from_off_file.cpp [ 66%] Linking CXX executable rips_persistence_step_by_step cd /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology && /usr/bin/cmake -E cmake_link_script CMakeFiles/rips_persistence_step_by_step.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/rips_persistence_step_by_step.dir/rips_persistence_step_by_step.cpp.o -o rips_persistence_step_by_step -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -lboost_program_options -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 66%] Built target rips_persistence_step_by_step make -f example/Simplex_tree/CMakeFiles/Simplex_tree_example_cech_complex_cgal_mini_sphere_3d.dir/build.make example/Simplex_tree/CMakeFiles/Simplex_tree_example_cech_complex_cgal_mini_sphere_3d.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Simplex_tree /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree/CMakeFiles/Simplex_tree_example_cech_complex_cgal_mini_sphere_3d.dir/DependInfo.cmake --color= [ 66%] Built target periodic_alpha_complex_3d_persistence make -f example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_from_simplices.dir/build.make example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_from_simplices.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Skeleton_blocker /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Skeleton_blocker /build/gudhi-2.3.0+dfsg/build/example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_from_simplices.dir/DependInfo.cmake --color= Scanning dependencies of target Simplex_tree_example_cech_complex_cgal_mini_sphere_3d make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Simplex_tree/CMakeFiles/Simplex_tree_example_cech_complex_cgal_mini_sphere_3d.dir/build.make example/Simplex_tree/CMakeFiles/Simplex_tree_example_cech_complex_cgal_mini_sphere_3d.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' Scanning dependencies of target Skeleton_blocker_example_from_simplices make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_from_simplices.dir/build.make example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_from_simplices.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 66%] Building CXX object example/Simplex_tree/CMakeFiles/Simplex_tree_example_cech_complex_cgal_mini_sphere_3d.dir/cech_complex_cgal_mini_sphere_3d.cpp.o cd /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/Simplex_tree_example_cech_complex_cgal_mini_sphere_3d.dir/cech_complex_cgal_mini_sphere_3d.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Simplex_tree/cech_complex_cgal_mini_sphere_3d.cpp [ 67%] Building CXX object example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_from_simplices.dir/Skeleton_blocker_from_simplices.cpp.o cd /build/gudhi-2.3.0+dfsg/build/example/Skeleton_blocker && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/Skeleton_blocker_example_from_simplices.dir/Skeleton_blocker_from_simplices.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Skeleton_blocker/Skeleton_blocker_from_simplices.cpp [ 68%] Linking CXX executable rips_persistence_via_boundary_matrix cd /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology && /usr/bin/cmake -E cmake_link_script CMakeFiles/rips_persistence_via_boundary_matrix.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/rips_persistence_via_boundary_matrix.dir/rips_persistence_via_boundary_matrix.cpp.o -o rips_persistence_via_boundary_matrix -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -lboost_program_options -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 68%] Built target rips_persistence_via_boundary_matrix make -f example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_iteration.dir/build.make example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_iteration.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Skeleton_blocker /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Skeleton_blocker /build/gudhi-2.3.0+dfsg/build/example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_iteration.dir/DependInfo.cmake --color= Scanning dependencies of target Skeleton_blocker_example_iteration make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_iteration.dir/build.make example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_iteration.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 69%] Building CXX object example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_iteration.dir/Skeleton_blocker_iteration.cpp.o cd /build/gudhi-2.3.0+dfsg/build/example/Skeleton_blocker && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/Skeleton_blocker_example_iteration.dir/Skeleton_blocker_iteration.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Skeleton_blocker/Skeleton_blocker_iteration.cpp [ 69%] Linking CXX executable rips_multifield_persistence cd /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology && /usr/bin/cmake -E cmake_link_script CMakeFiles/rips_multifield_persistence.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/rips_multifield_persistence.dir/rips_multifield_persistence.cpp.o -o rips_multifield_persistence -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -lboost_program_options -lgmpxx -lgmp -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 69%] Built target rips_multifield_persistence make -f example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_link.dir/build.make example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_link.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Skeleton_blocker /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Skeleton_blocker /build/gudhi-2.3.0+dfsg/build/example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_link.dir/DependInfo.cmake --color= Scanning dependencies of target Skeleton_blocker_example_link make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_link.dir/build.make example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_link.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 70%] Building CXX object example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_link.dir/Skeleton_blocker_link.cpp.o cd /build/gudhi-2.3.0+dfsg/build/example/Skeleton_blocker && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/Skeleton_blocker_example_link.dir/Skeleton_blocker_link.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Skeleton_blocker/Skeleton_blocker_link.cpp [ 71%] Linking CXX executable weighted_periodic_alpha_complex_3d_persistence cd /build/gudhi-2.3.0+dfsg/build/utilities/Alpha_complex && /usr/bin/cmake -E cmake_link_script CMakeFiles/weighted_periodic_alpha_complex_3d_persistence.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/weighted_periodic_alpha_complex_3d_persistence.dir/weighted_periodic_alpha_complex_3d_persistence.cpp.o -o weighted_periodic_alpha_complex_3d_persistence -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 71%] Built target weighted_periodic_alpha_complex_3d_persistence make -f example/Spatial_searching/CMakeFiles/Spatial_searching_example_spatial_searching.dir/build.make example/Spatial_searching/CMakeFiles/Spatial_searching_example_spatial_searching.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Spatial_searching /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Spatial_searching /build/gudhi-2.3.0+dfsg/build/example/Spatial_searching/CMakeFiles/Spatial_searching_example_spatial_searching.dir/DependInfo.cmake --color= Scanning dependencies of target Spatial_searching_example_spatial_searching make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Spatial_searching/CMakeFiles/Spatial_searching_example_spatial_searching.dir/build.make example/Spatial_searching/CMakeFiles/Spatial_searching_example_spatial_searching.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 72%] Building CXX object example/Spatial_searching/CMakeFiles/Spatial_searching_example_spatial_searching.dir/example_spatial_searching.cpp.o cd /build/gudhi-2.3.0+dfsg/build/example/Spatial_searching && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/Spatial_searching_example_spatial_searching.dir/example_spatial_searching.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Spatial_searching/example_spatial_searching.cpp [ 72%] Linking CXX executable Simplex_tree_example_mini_simplex_tree cd /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree && /usr/bin/cmake -E cmake_link_script CMakeFiles/Simplex_tree_example_mini_simplex_tree.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Simplex_tree_example_mini_simplex_tree.dir/mini_simplex_tree.cpp.o -o Simplex_tree_example_mini_simplex_tree -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp [ 73%] Linking CXX executable alpha_complex_persistence cd /build/gudhi-2.3.0+dfsg/build/utilities/Alpha_complex && /usr/bin/cmake -E cmake_link_script CMakeFiles/alpha_complex_persistence.dir/link.txt --verbose=1 make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/alpha_complex_persistence.dir/alpha_complex_persistence.cpp.o -o alpha_complex_persistence -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -lboost_program_options -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp [ 73%] Built target Simplex_tree_example_mini_simplex_tree make -f example/Subsampling/CMakeFiles/Subsampling_example_choose_n_farthest_points.dir/build.make example/Subsampling/CMakeFiles/Subsampling_example_choose_n_farthest_points.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Subsampling /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Subsampling /build/gudhi-2.3.0+dfsg/build/example/Subsampling/CMakeFiles/Subsampling_example_choose_n_farthest_points.dir/DependInfo.cmake --color= In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/smart_ptr/shared_array.hpp:21, from /usr/include/boost/shared_array.hpp:17, from /usr/include/boost/graph/detail/d_ary_heap.hpp:20, from /usr/include/boost/graph/named_function_params.hpp:24, from /usr/include/boost/graph/depth_first_search.hpp:21, from /usr/include/boost/graph/connected_components.hpp:15, from /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:37, from /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker.h:26, from /build/gudhi-2.3.0+dfsg/example/Skeleton_blocker/Skeleton_blocker_from_simplices.cpp:23: /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Graph_vertex& Gudhi::skeleton_blocker::Skeleton_blocker_complex::operator[](Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Graph_vertex = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_vertex; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:387:12: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle Gudhi::skeleton_blocker::Skeleton_blocker_complex::add_vertex() [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:208:31: required from 'void Gudhi::skeleton_blocker::Skeleton_blocker_complex::add_vertices_and_edges(SimpleHandleOutputIterator, SimpleHandleOutputIterator) [with SimpleHandleOutputIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:188:5: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Skeleton_blocker_complex(SimpleHandleOutputIterator, SimpleHandleOutputIterator, bool, Gudhi::skeleton_blocker::Skeleton_blocker_complex::Visitor*) [with SimpleHandleOutputIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Visitor = Gudhi::skeleton_blocker::Skeleton_blocker_complex_visitor; typename SkeletonBlockerDS::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/example/Skeleton_blocker/Skeleton_blocker_from_simplices.cpp:66:55: required from here /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:366:50: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'unsigned int'} [-Wsign-compare] 0 <= address.vertex && address.vertex < boost::num_vertices(skeleton)); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Scanning dependencies of target Subsampling_example_choose_n_farthest_points make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Subsampling/CMakeFiles/Subsampling_example_choose_n_farthest_points.dir/build.make example/Subsampling/CMakeFiles/Subsampling_example_choose_n_farthest_points.dir/build /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Root_vertex_handle Gudhi::skeleton_blocker::Skeleton_blocker_complex::get_id(Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Root_vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Root_vertex_handle; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:585:7: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Edge_handle Gudhi::skeleton_blocker::Skeleton_blocker_complex::add_edge_without_blockers(Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle, Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Edge_handle = boost::detail::edge_desc_impl; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:211:7: required from 'void Gudhi::skeleton_blocker::Skeleton_blocker_complex::add_vertices_and_edges(SimpleHandleOutputIterator, SimpleHandleOutputIterator) [with SimpleHandleOutputIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:188:5: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Skeleton_blocker_complex(SimpleHandleOutputIterator, SimpleHandleOutputIterator, bool, Gudhi::skeleton_blocker::Skeleton_blocker_complex::Visitor*) [with SimpleHandleOutputIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Visitor = Gudhi::skeleton_blocker::Skeleton_blocker_complex_visitor; typename SkeletonBlockerDS::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/example/Skeleton_blocker/Skeleton_blocker_from_simplices.cpp:66:55: required from here /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:456:46: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'unsigned int'} [-Wsign-compare] assert(0 <= local.vertex && local.vertex < boost::num_vertices(skeleton)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 73%] Building CXX object example/Subsampling/CMakeFiles/Subsampling_example_choose_n_farthest_points.dir/example_choose_n_farthest_points.cpp.o cd /build/gudhi-2.3.0+dfsg/build/example/Subsampling && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/Subsampling_example_choose_n_farthest_points.dir/example_choose_n_farthest_points.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Subsampling/example_choose_n_farthest_points.cpp /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'const Graph_vertex& Gudhi::skeleton_blocker::Skeleton_blocker_complex::operator[](Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Graph_vertex = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_vertex; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:419:19: required from 'bool Gudhi::skeleton_blocker::Skeleton_blocker_complex::contains_vertex(Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:579:5: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Edge_handle Gudhi::skeleton_blocker::Skeleton_blocker_complex::add_edge_without_blockers(Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle, Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Edge_handle = boost::detail::edge_desc_impl; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:211:7: required from 'void Gudhi::skeleton_blocker::Skeleton_blocker_complex::add_vertices_and_edges(SimpleHandleOutputIterator, SimpleHandleOutputIterator) [with SimpleHandleOutputIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:188:5: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Skeleton_blocker_complex(SimpleHandleOutputIterator, SimpleHandleOutputIterator, bool, Gudhi::skeleton_blocker::Skeleton_blocker_complex::Visitor*) [with SimpleHandleOutputIterator = __gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >; SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Visitor = Gudhi::skeleton_blocker::Skeleton_blocker_complex_visitor; typename SkeletonBlockerDS::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/example/Skeleton_blocker/Skeleton_blocker_from_simplices.cpp:66:55: required from here /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:376:50: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'unsigned int'} [-Wsign-compare] 0 <= address.vertex && address.vertex < boost::num_vertices(skeleton)); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 74%] Linking CXX executable Simplex_tree_example_from_cliques_of_graph cd /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree && /usr/bin/cmake -E cmake_link_script CMakeFiles/Simplex_tree_example_from_cliques_of_graph.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Simplex_tree_example_from_cliques_of_graph.dir/simplex_tree_from_cliques_of_graph.cpp.o -o Simplex_tree_example_from_cliques_of_graph -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'int Gudhi::skeleton_blocker::Skeleton_blocker_complex::degree(Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_link_complex.h:153:5: required from 'void Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::compute_link_vertices(const ComplexType&, Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::Vertex_handle, bool) [with ComplexType = Gudhi::skeleton_blocker::Skeleton_blocker_complex; Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_link_complex.h:118:7: required from 'void Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::compute_link_vertices(const ComplexType&, const Simplex&, bool, bool) [with ComplexType = Gudhi::skeleton_blocker::Skeleton_blocker_complex; Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::Simplex = Gudhi::skeleton_blocker::Skeleton_blocker_simplex]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_link_complex.h:271:5: required from 'void Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::build_link(const ComplexType&, const Simplex&, bool, bool) [with ComplexType = Gudhi::skeleton_blocker::Skeleton_blocker_complex; Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::Simplex = Gudhi::skeleton_blocker::Skeleton_blocker_simplex]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_link_complex.h:89:5: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::Skeleton_blocker_link_complex(const ComplexType&, Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::Vertex_handle, bool) [with ComplexType = Gudhi::skeleton_blocker::Skeleton_blocker_complex; Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker/Skeleton_blocker_link_superior.h:68:73: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_link_superior::Skeleton_blocker_link_superior(const ComplexType&, Gudhi::skeleton_blocker::Skeleton_blocker_link_superior::Vertex_handle) [with ComplexType = Gudhi::skeleton_blocker::Skeleton_blocker_complex; Gudhi::skeleton_blocker::Skeleton_blocker_link_superior::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker/iterators/Skeleton_blockers_simplices_iterators.h:81:14: required from 'Gudhi::skeleton_blocker::Simplex_around_vertex_iterator::Simplex_around_vertex_iterator(const Complex*, Gudhi::skeleton_blocker::Simplex_around_vertex_iterator::Vertex_handle) [with SkeletonBlockerComplex = Gudhi::skeleton_blocker::Skeleton_blocker_complex; Link = Gudhi::skeleton_blocker::Skeleton_blocker_link_superior >; Gudhi::skeleton_blocker::Simplex_around_vertex_iterator::Complex = Gudhi::skeleton_blocker::Skeleton_blocker_complex; Gudhi::skeleton_blocker::Simplex_around_vertex_iterator::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker/iterators/Skeleton_blockers_simplices_iterators.h:239:75: required from 'Gudhi::skeleton_blocker::Simplex_iterator::Simplex_iterator(const Complex*) [with SkeletonBlockerComplex = Gudhi::skeleton_blocker::Skeleton_blocker_complex; Gudhi::skeleton_blocker::Simplex_iterator::Complex = Gudhi::skeleton_blocker::Skeleton_blocker_complex]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:1448:32: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Complex_simplex_range Gudhi::skeleton_blocker::Skeleton_blocker_complex::complex_simplex_range() const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Complex_simplex_range = boost::iterator_range > >]' /build/gudhi-2.3.0+dfsg/example/Skeleton_blocker/Skeleton_blocker_from_simplices.cpp:51:58: required from here /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:481:46: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'unsigned int'} [-Wsign-compare] assert(0 <= local.vertex && local.vertex < boost::num_vertices(skeleton)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 74%] Built target Simplex_tree_example_from_cliques_of_graph make -f example/Subsampling/CMakeFiles/Subsampling_example_pick_n_random_points.dir/build.make example/Subsampling/CMakeFiles/Subsampling_example_pick_n_random_points.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Subsampling /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Subsampling /build/gudhi-2.3.0+dfsg/build/example/Subsampling/CMakeFiles/Subsampling_example_pick_n_random_points.dir/DependInfo.cmake --color= Scanning dependencies of target Subsampling_example_pick_n_random_points make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Subsampling/CMakeFiles/Subsampling_example_pick_n_random_points.dir/build.make example/Subsampling/CMakeFiles/Subsampling_example_pick_n_random_points.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 74%] Building CXX object example/Subsampling/CMakeFiles/Subsampling_example_pick_n_random_points.dir/example_pick_n_random_points.cpp.o cd /build/gudhi-2.3.0+dfsg/build/example/Subsampling && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/Subsampling_example_pick_n_random_points.dir/example_pick_n_random_points.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Subsampling/example_pick_n_random_points.cpp In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/smart_ptr/shared_array.hpp:21, from /usr/include/boost/shared_array.hpp:17, from /usr/include/boost/graph/detail/d_ary_heap.hpp:20, from /usr/include/boost/graph/named_function_params.hpp:24, from /usr/include/boost/graph/depth_first_search.hpp:21, from /usr/include/boost/graph/connected_components.hpp:15, from /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:37, from /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker.h:26, from /build/gudhi-2.3.0+dfsg/example/Skeleton_blocker/Skeleton_blocker_iteration.cpp:23: /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Graph_vertex& Gudhi::skeleton_blocker::Skeleton_blocker_complex::operator[](Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Graph_vertex = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_vertex; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:387:12: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle Gudhi::skeleton_blocker::Skeleton_blocker_complex::add_vertex() [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/example/Skeleton_blocker/Skeleton_blocker_iteration.cpp:41:24: required from here /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:366:50: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'unsigned int'} [-Wsign-compare] 0 <= address.vertex && address.vertex < boost::num_vertices(skeleton)); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Root_vertex_handle Gudhi::skeleton_blocker::Skeleton_blocker_complex::get_id(Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Root_vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Root_vertex_handle; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:585:7: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Edge_handle Gudhi::skeleton_blocker::Skeleton_blocker_complex::add_edge_without_blockers(Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle, Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Edge_handle = boost::detail::edge_desc_impl; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/example/Skeleton_blocker/Skeleton_blocker_iteration.cpp:44:75: required from here /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:456:46: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'unsigned int'} [-Wsign-compare] assert(0 <= local.vertex && local.vertex < boost::num_vertices(skeleton)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'const Graph_vertex& Gudhi::skeleton_blocker::Skeleton_blocker_complex::operator[](Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Graph_vertex = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_vertex; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:419:19: required from 'bool Gudhi::skeleton_blocker::Skeleton_blocker_complex::contains_vertex(Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:579:5: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Edge_handle Gudhi::skeleton_blocker::Skeleton_blocker_complex::add_edge_without_blockers(Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle, Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Edge_handle = boost::detail::edge_desc_impl; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/example/Skeleton_blocker/Skeleton_blocker_iteration.cpp:44:75: required from here /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:376:50: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'unsigned int'} [-Wsign-compare] 0 <= address.vertex && address.vertex < boost::num_vertices(skeleton)); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 74%] Built target alpha_complex_persistence make -f example/Subsampling/CMakeFiles/Subsampling_example_custom_kernel.dir/build.make example/Subsampling/CMakeFiles/Subsampling_example_custom_kernel.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Subsampling /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Subsampling /build/gudhi-2.3.0+dfsg/build/example/Subsampling/CMakeFiles/Subsampling_example_custom_kernel.dir/DependInfo.cmake --color= Scanning dependencies of target Subsampling_example_custom_kernel make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Subsampling/CMakeFiles/Subsampling_example_custom_kernel.dir/build.make example/Subsampling/CMakeFiles/Subsampling_example_custom_kernel.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 74%] Building CXX object example/Subsampling/CMakeFiles/Subsampling_example_custom_kernel.dir/example_custom_kernel.cpp.o cd /build/gudhi-2.3.0+dfsg/build/example/Subsampling && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/Subsampling_example_custom_kernel.dir/example_custom_kernel.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Subsampling/example_custom_kernel.cpp /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'int Gudhi::skeleton_blocker::Skeleton_blocker_complex::degree(Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_link_complex.h:153:5: required from 'void Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::compute_link_vertices(const ComplexType&, Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::Vertex_handle, bool) [with ComplexType = Gudhi::skeleton_blocker::Skeleton_blocker_complex; Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_link_complex.h:118:7: required from 'void Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::compute_link_vertices(const ComplexType&, const Simplex&, bool, bool) [with ComplexType = Gudhi::skeleton_blocker::Skeleton_blocker_complex; Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::Simplex = Gudhi::skeleton_blocker::Skeleton_blocker_simplex]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_link_complex.h:271:5: required from 'void Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::build_link(const ComplexType&, const Simplex&, bool, bool) [with ComplexType = Gudhi::skeleton_blocker::Skeleton_blocker_complex; Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::Simplex = Gudhi::skeleton_blocker::Skeleton_blocker_simplex]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_link_complex.h:89:5: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::Skeleton_blocker_link_complex(const ComplexType&, Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::Vertex_handle, bool) [with ComplexType = Gudhi::skeleton_blocker::Skeleton_blocker_complex; Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker/Skeleton_blocker_link_superior.h:68:73: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_link_superior::Skeleton_blocker_link_superior(const ComplexType&, Gudhi::skeleton_blocker::Skeleton_blocker_link_superior::Vertex_handle) [with ComplexType = Gudhi::skeleton_blocker::Skeleton_blocker_complex; Gudhi::skeleton_blocker::Skeleton_blocker_link_superior::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker/iterators/Skeleton_blockers_simplices_iterators.h:81:14: required from 'Gudhi::skeleton_blocker::Simplex_around_vertex_iterator::Simplex_around_vertex_iterator(const Complex*, Gudhi::skeleton_blocker::Simplex_around_vertex_iterator::Vertex_handle) [with SkeletonBlockerComplex = Gudhi::skeleton_blocker::Skeleton_blocker_complex; Link = Gudhi::skeleton_blocker::Skeleton_blocker_link_superior >; Gudhi::skeleton_blocker::Simplex_around_vertex_iterator::Complex = Gudhi::skeleton_blocker::Skeleton_blocker_complex; Gudhi::skeleton_blocker::Simplex_around_vertex_iterator::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker/iterators/Skeleton_blockers_simplices_iterators.h:239:75: required from 'Gudhi::skeleton_blocker::Simplex_iterator::Simplex_iterator(const Complex*) [with SkeletonBlockerComplex = Gudhi::skeleton_blocker::Skeleton_blocker_complex; Gudhi::skeleton_blocker::Simplex_iterator::Complex = Gudhi::skeleton_blocker::Skeleton_blocker_complex]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:1448:32: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Complex_simplex_range Gudhi::skeleton_blocker::Skeleton_blocker_complex::complex_simplex_range() const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Complex_simplex_range = boost::iterator_range > >]' /build/gudhi-2.3.0+dfsg/example/Skeleton_blocker/Skeleton_blocker_iteration.cpp:73:58: required from here /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:481:46: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'unsigned int'} [-Wsign-compare] assert(0 <= local.vertex && local.vertex < boost::num_vertices(skeleton)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 74%] Linking CXX executable Simplex_tree_example_simple_simplex_tree cd /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree && /usr/bin/cmake -E cmake_link_script CMakeFiles/Simplex_tree_example_simple_simplex_tree.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Simplex_tree_example_simple_simplex_tree.dir/simple_simplex_tree.cpp.o -o Simplex_tree_example_simple_simplex_tree -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/smart_ptr/shared_array.hpp:21, from /usr/include/boost/shared_array.hpp:17, from /usr/include/boost/graph/detail/d_ary_heap.hpp:20, from /usr/include/boost/graph/named_function_params.hpp:24, from /usr/include/boost/graph/depth_first_search.hpp:21, from /usr/include/boost/graph/connected_components.hpp:15, from /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:37, from /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker.h:26, from /build/gudhi-2.3.0+dfsg/example/Skeleton_blocker/Skeleton_blocker_link.cpp:23: /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'const Graph_vertex& Gudhi::skeleton_blocker::Skeleton_blocker_complex::operator[](Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Graph_vertex = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_vertex; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:419:19: required from 'bool Gudhi::skeleton_blocker::Skeleton_blocker_complex::contains_vertex(Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/example/Skeleton_blocker/Skeleton_blocker_link.cpp:58:110: required from here /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:376:50: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'unsigned int'} [-Wsign-compare] 0 <= address.vertex && address.vertex < boost::num_vertices(skeleton)); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Graph_vertex& Gudhi::skeleton_blocker::Skeleton_blocker_complex::operator[](Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Graph_vertex = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_vertex; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:387:12: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle Gudhi::skeleton_blocker::Skeleton_blocker_complex::add_vertex() [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:169:7: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Skeleton_blocker_complex(size_t, Gudhi::skeleton_blocker::Skeleton_blocker_complex::Visitor*) [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; size_t = unsigned int; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Visitor = Gudhi::skeleton_blocker::Skeleton_blocker_complex_visitor; typename SkeletonBlockerDS::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/example/Skeleton_blocker/Skeleton_blocker_link.cpp:41:11: required from here /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:366:50: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'unsigned int'} [-Wsign-compare] 0 <= address.vertex && address.vertex < boost::num_vertices(skeleton)); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 74%] Built target Simplex_tree_example_simple_simplex_tree make -f example/Subsampling/CMakeFiles/Subsampling_example_sparsify_point_set.dir/build.make example/Subsampling/CMakeFiles/Subsampling_example_sparsify_point_set.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Subsampling /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Subsampling /build/gudhi-2.3.0+dfsg/build/example/Subsampling/CMakeFiles/Subsampling_example_sparsify_point_set.dir/DependInfo.cmake --color= Scanning dependencies of target Subsampling_example_sparsify_point_set make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Subsampling/CMakeFiles/Subsampling_example_sparsify_point_set.dir/build.make example/Subsampling/CMakeFiles/Subsampling_example_sparsify_point_set.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 74%] Building CXX object example/Subsampling/CMakeFiles/Subsampling_example_sparsify_point_set.dir/example_sparsify_point_set.cpp.o cd /build/gudhi-2.3.0+dfsg/build/example/Subsampling && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/Subsampling_example_sparsify_point_set.dir/example_sparsify_point_set.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Subsampling/example_sparsify_point_set.cpp /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Root_vertex_handle Gudhi::skeleton_blocker::Skeleton_blocker_complex::get_id(Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Root_vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Root_vertex_handle; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:585:7: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Edge_handle Gudhi::skeleton_blocker::Skeleton_blocker_complex::add_edge_without_blockers(Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle, Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Edge_handle = boost::detail::edge_desc_impl; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:558:10: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Edge_handle Gudhi::skeleton_blocker::Skeleton_blocker_complex::add_edge(Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle, Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Edge_handle = boost::detail::edge_desc_impl; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:569:9: required from 'void Gudhi::skeleton_blocker::Skeleton_blocker_complex::add_edge(const Simplex&) [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Simplex = Gudhi::skeleton_blocker::Skeleton_blocker_simplex; typename SkeletonBlockerDS::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_simplifiable_complex.h:222:5: required from 'void Gudhi::skeleton_blocker::Skeleton_blocker_complex::add_simplex(const Simplex&) [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Simplex = Gudhi::skeleton_blocker::Skeleton_blocker_simplex; typename SkeletonBlockerDS::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/example/Skeleton_blocker/Skeleton_blocker_link.cpp:45:34: required from here /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:456:46: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'unsigned int'} [-Wsign-compare] assert(0 <= local.vertex && local.vertex < boost::num_vertices(skeleton)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'int Gudhi::skeleton_blocker::Skeleton_blocker_complex::degree(Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_link_complex.h:153:5: required from 'void Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::compute_link_vertices(const ComplexType&, Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::Vertex_handle, bool) [with ComplexType = Gudhi::skeleton_blocker::Skeleton_blocker_complex; Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_link_complex.h:118:7: required from 'void Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::compute_link_vertices(const ComplexType&, const Simplex&, bool, bool) [with ComplexType = Gudhi::skeleton_blocker::Skeleton_blocker_complex; Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::Simplex = Gudhi::skeleton_blocker::Skeleton_blocker_simplex]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_link_complex.h:271:5: required from 'void Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::build_link(const ComplexType&, const Simplex&, bool, bool) [with ComplexType = Gudhi::skeleton_blocker::Skeleton_blocker_complex; Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::Simplex = Gudhi::skeleton_blocker::Skeleton_blocker_simplex]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_link_complex.h:77:7: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::Skeleton_blocker_link_complex(const ComplexType&, const Simplex&, bool, bool) [with ComplexType = Gudhi::skeleton_blocker::Skeleton_blocker_complex; Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::Simplex = Gudhi::skeleton_blocker::Skeleton_blocker_simplex]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:906:12: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Link_complex Gudhi::skeleton_blocker::Skeleton_blocker_complex::link(Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Link_complex = Gudhi::skeleton_blocker::Skeleton_blocker_link_complex >; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/example/Skeleton_blocker/Skeleton_blocker_link.cpp:50:44: required from here /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:481:46: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'unsigned int'} [-Wsign-compare] assert(0 <= local.vertex && local.vertex < boost::num_vertices(skeleton)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 74%] Linking CXX executable Simplex_tree_example_graph_expansion_with_blocker cd /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree && /usr/bin/cmake -E cmake_link_script CMakeFiles/Simplex_tree_example_graph_expansion_with_blocker.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Simplex_tree_example_graph_expansion_with_blocker.dir/graph_expansion_with_blocker.cpp.o -o Simplex_tree_example_graph_expansion_with_blocker -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 74%] Built target Simplex_tree_example_graph_expansion_with_blocker make -f example/Tangential_complex/CMakeFiles/Tangential_complex_example_basic.dir/build.make example/Tangential_complex/CMakeFiles/Tangential_complex_example_basic.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Tangential_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Tangential_complex /build/gudhi-2.3.0+dfsg/build/example/Tangential_complex/CMakeFiles/Tangential_complex_example_basic.dir/DependInfo.cmake --color= Scanning dependencies of target Tangential_complex_example_basic make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Tangential_complex/CMakeFiles/Tangential_complex_example_basic.dir/build.make example/Tangential_complex/CMakeFiles/Tangential_complex_example_basic.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 74%] Building CXX object example/Tangential_complex/CMakeFiles/Tangential_complex_example_basic.dir/example_basic.cpp.o cd /build/gudhi-2.3.0+dfsg/build/example/Tangential_complex && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/Tangential_complex_example_basic.dir/example_basic.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Tangential_complex/example_basic.cpp [ 74%] Linking CXX executable rips_distance_matrix_persistence cd /build/gudhi-2.3.0+dfsg/build/utilities/Rips_complex && /usr/bin/cmake -E cmake_link_script CMakeFiles/rips_distance_matrix_persistence.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/rips_distance_matrix_persistence.dir/rips_distance_matrix_persistence.cpp.o -o rips_distance_matrix_persistence -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -lboost_program_options -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 74%] Linking CXX executable Alpha_complex_example_from_points cd /build/gudhi-2.3.0+dfsg/build/example/Alpha_complex && /usr/bin/cmake -E cmake_link_script CMakeFiles/Alpha_complex_example_from_points.dir/link.txt --verbose=1 [ 74%] Built target rips_distance_matrix_persistence make -f example/Tangential_complex/CMakeFiles/Tangential_complex_example_with_perturb.dir/build.make example/Tangential_complex/CMakeFiles/Tangential_complex_example_with_perturb.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Tangential_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Tangential_complex /build/gudhi-2.3.0+dfsg/build/example/Tangential_complex/CMakeFiles/Tangential_complex_example_with_perturb.dir/DependInfo.cmake --color= /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Alpha_complex_example_from_points.dir/Alpha_complex_from_points.cpp.o -o Alpha_complex_example_from_points -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp Scanning dependencies of target Tangential_complex_example_with_perturb make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Tangential_complex/CMakeFiles/Tangential_complex_example_with_perturb.dir/build.make example/Tangential_complex/CMakeFiles/Tangential_complex_example_with_perturb.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 74%] Building CXX object example/Tangential_complex/CMakeFiles/Tangential_complex_example_with_perturb.dir/example_with_perturb.cpp.o cd /build/gudhi-2.3.0+dfsg/build/example/Tangential_complex && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/Tangential_complex_example_with_perturb.dir/example_with_perturb.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Tangential_complex/example_with_perturb.cpp [ 75%] Linking CXX executable alpha_rips_persistence_bottleneck_distance cd /build/gudhi-2.3.0+dfsg/build/example/Bottleneck_distance && /usr/bin/cmake -E cmake_link_script CMakeFiles/alpha_rips_persistence_bottleneck_distance.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/alpha_rips_persistence_bottleneck_distance.dir/alpha_rips_persistence_bottleneck_distance.cpp.o -o alpha_rips_persistence_bottleneck_distance -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -lboost_program_options -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 75%] Built target Alpha_complex_example_from_points make -f example/Witness_complex/CMakeFiles/Witness_complex_example_off.dir/build.make example/Witness_complex/CMakeFiles/Witness_complex_example_off.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Witness_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Witness_complex /build/gudhi-2.3.0+dfsg/build/example/Witness_complex/CMakeFiles/Witness_complex_example_off.dir/DependInfo.cmake --color= Scanning dependencies of target Witness_complex_example_off make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Witness_complex/CMakeFiles/Witness_complex_example_off.dir/build.make example/Witness_complex/CMakeFiles/Witness_complex_example_off.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 76%] Building CXX object example/Witness_complex/CMakeFiles/Witness_complex_example_off.dir/example_witness_complex_off.cpp.o cd /build/gudhi-2.3.0+dfsg/build/example/Witness_complex && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/Witness_complex_example_off.dir/example_witness_complex_off.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Witness_complex/example_witness_complex_off.cpp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 76%] Built target alpha_rips_persistence_bottleneck_distance make -f example/Witness_complex/CMakeFiles/Witness_complex_example_nearest_landmark_table.dir/build.make example/Witness_complex/CMakeFiles/Witness_complex_example_nearest_landmark_table.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Witness_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Witness_complex /build/gudhi-2.3.0+dfsg/build/example/Witness_complex/CMakeFiles/Witness_complex_example_nearest_landmark_table.dir/DependInfo.cmake --color= Scanning dependencies of target Witness_complex_example_nearest_landmark_table make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Witness_complex/CMakeFiles/Witness_complex_example_nearest_landmark_table.dir/build.make example/Witness_complex/CMakeFiles/Witness_complex_example_nearest_landmark_table.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 77%] Building CXX object example/Witness_complex/CMakeFiles/Witness_complex_example_nearest_landmark_table.dir/example_nearest_landmark_table.cpp.o cd /build/gudhi-2.3.0+dfsg/build/example/Witness_complex && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/Witness_complex_example_nearest_landmark_table.dir/example_nearest_landmark_table.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Witness_complex/example_nearest_landmark_table.cpp [ 78%] Linking CXX executable Subsampling_example_custom_kernel cd /build/gudhi-2.3.0+dfsg/build/example/Subsampling && /usr/bin/cmake -E cmake_link_script CMakeFiles/Subsampling_example_custom_kernel.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Subsampling_example_custom_kernel.dir/example_custom_kernel.cpp.o -o Subsampling_example_custom_kernel -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 78%] Linking CXX executable rips_correlation_matrix_persistence cd /build/gudhi-2.3.0+dfsg/build/utilities/Rips_complex && /usr/bin/cmake -E cmake_link_script CMakeFiles/rips_correlation_matrix_persistence.dir/link.txt --verbose=1 [ 78%] Built target Subsampling_example_custom_kernel make -f example/Witness_complex/CMakeFiles/Witness_complex_example_sphere.dir/build.make example/Witness_complex/CMakeFiles/Witness_complex_example_sphere.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Witness_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Witness_complex /build/gudhi-2.3.0+dfsg/build/example/Witness_complex/CMakeFiles/Witness_complex_example_sphere.dir/DependInfo.cmake --color= /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/rips_correlation_matrix_persistence.dir/rips_correlation_matrix_persistence.cpp.o -o rips_correlation_matrix_persistence -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -lboost_system -lboost_program_options -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp Scanning dependencies of target Witness_complex_example_sphere make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Witness_complex/CMakeFiles/Witness_complex_example_sphere.dir/build.make example/Witness_complex/CMakeFiles/Witness_complex_example_sphere.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 79%] Building CXX object example/Witness_complex/CMakeFiles/Witness_complex_example_sphere.dir/example_witness_complex_sphere.cpp.o cd /build/gudhi-2.3.0+dfsg/build/example/Witness_complex && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/Witness_complex_example_sphere.dir/example_witness_complex_sphere.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Witness_complex/example_witness_complex_sphere.cpp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 80%] Linking CXX executable sparse_rips_persistence cd /build/gudhi-2.3.0+dfsg/build/utilities/Rips_complex && /usr/bin/cmake -E cmake_link_script CMakeFiles/sparse_rips_persistence.dir/link.txt --verbose=1 [ 80%] Built target rips_correlation_matrix_persistence make -f example/Witness_complex/CMakeFiles/Witness_complex_example_strong_off.dir/build.make example/Witness_complex/CMakeFiles/Witness_complex_example_strong_off.dir/depend [ 81%] Linking CXX executable Subsampling_example_choose_n_farthest_points cd /build/gudhi-2.3.0+dfsg/build/example/Subsampling && /usr/bin/cmake -E cmake_link_script CMakeFiles/Subsampling_example_choose_n_farthest_points.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/sparse_rips_persistence.dir/sparse_rips_persistence.cpp.o -o sparse_rips_persistence -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -lboost_program_options -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Witness_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Witness_complex /build/gudhi-2.3.0+dfsg/build/example/Witness_complex/CMakeFiles/Witness_complex_example_strong_off.dir/DependInfo.cmake --color= /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Subsampling_example_choose_n_farthest_points.dir/example_choose_n_farthest_points.cpp.o -o Subsampling_example_choose_n_farthest_points -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp Scanning dependencies of target Witness_complex_example_strong_off make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Witness_complex/CMakeFiles/Witness_complex_example_strong_off.dir/build.make example/Witness_complex/CMakeFiles/Witness_complex_example_strong_off.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 82%] Building CXX object example/Witness_complex/CMakeFiles/Witness_complex_example_strong_off.dir/example_strong_witness_complex_off.cpp.o cd /build/gudhi-2.3.0+dfsg/build/example/Witness_complex && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/Witness_complex_example_strong_off.dir/example_strong_witness_complex_off.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Witness_complex/example_strong_witness_complex_off.cpp [ 82%] Linking CXX executable rips_persistence cd /build/gudhi-2.3.0+dfsg/build/utilities/Rips_complex && /usr/bin/cmake -E cmake_link_script CMakeFiles/rips_persistence.dir/link.txt --verbose=1 make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 82%] Built target Subsampling_example_choose_n_farthest_points /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/rips_persistence.dir/rips_persistence.cpp.o -o rips_persistence -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -lboost_program_options -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp make -f utilities/Witness_complex/CMakeFiles/Witness_complex_weak_witness_persistence.dir/build.make utilities/Witness_complex/CMakeFiles/Witness_complex_weak_witness_persistence.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Witness_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Witness_complex /build/gudhi-2.3.0+dfsg/build/utilities/Witness_complex/CMakeFiles/Witness_complex_weak_witness_persistence.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' Scanning dependencies of target Witness_complex_weak_witness_persistence make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Witness_complex/CMakeFiles/Witness_complex_weak_witness_persistence.dir/build.make utilities/Witness_complex/CMakeFiles/Witness_complex_weak_witness_persistence.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 82%] Built target sparse_rips_persistence make -f utilities/Witness_complex/CMakeFiles/Witness_complex_strong_witness_persistence.dir/build.make utilities/Witness_complex/CMakeFiles/Witness_complex_strong_witness_persistence.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Witness_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Witness_complex /build/gudhi-2.3.0+dfsg/build/utilities/Witness_complex/CMakeFiles/Witness_complex_strong_witness_persistence.dir/DependInfo.cmake --color= [ 82%] Building CXX object utilities/Witness_complex/CMakeFiles/Witness_complex_weak_witness_persistence.dir/weak_witness_persistence.cpp.o cd /build/gudhi-2.3.0+dfsg/build/utilities/Witness_complex && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/Witness_complex_weak_witness_persistence.dir/weak_witness_persistence.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Witness_complex/weak_witness_persistence.cpp Scanning dependencies of target Witness_complex_strong_witness_persistence make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Witness_complex/CMakeFiles/Witness_complex_strong_witness_persistence.dir/build.make utilities/Witness_complex/CMakeFiles/Witness_complex_strong_witness_persistence.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 83%] Building CXX object utilities/Witness_complex/CMakeFiles/Witness_complex_strong_witness_persistence.dir/strong_witness_persistence.cpp.o cd /build/gudhi-2.3.0+dfsg/build/utilities/Witness_complex && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/Witness_complex_strong_witness_persistence.dir/strong_witness_persistence.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Witness_complex/strong_witness_persistence.cpp [ 84%] Linking CXX executable Subsampling_example_pick_n_random_points cd /build/gudhi-2.3.0+dfsg/build/example/Subsampling && /usr/bin/cmake -E cmake_link_script CMakeFiles/Subsampling_example_pick_n_random_points.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Subsampling_example_pick_n_random_points.dir/example_pick_n_random_points.cpp.o -o Subsampling_example_pick_n_random_points -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 84%] Built target Subsampling_example_pick_n_random_points make -f example/Nerve_GIC/CMakeFiles/FuncGIC.dir/build.make example/Nerve_GIC/CMakeFiles/FuncGIC.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Nerve_GIC /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Nerve_GIC /build/gudhi-2.3.0+dfsg/build/example/Nerve_GIC/CMakeFiles/FuncGIC.dir/DependInfo.cmake --color= [ 84%] Built target rips_persistence make -f example/Nerve_GIC/CMakeFiles/CoordGIC.dir/build.make example/Nerve_GIC/CMakeFiles/CoordGIC.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Nerve_GIC /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Nerve_GIC /build/gudhi-2.3.0+dfsg/build/example/Nerve_GIC/CMakeFiles/CoordGIC.dir/DependInfo.cmake --color= Scanning dependencies of target FuncGIC make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Nerve_GIC/CMakeFiles/FuncGIC.dir/build.make example/Nerve_GIC/CMakeFiles/FuncGIC.dir/build Scanning dependencies of target CoordGIC make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Nerve_GIC/CMakeFiles/CoordGIC.dir/build.make example/Nerve_GIC/CMakeFiles/CoordGIC.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 85%] Building CXX object example/Nerve_GIC/CMakeFiles/FuncGIC.dir/FuncGIC.cpp.o cd /build/gudhi-2.3.0+dfsg/build/example/Nerve_GIC && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/FuncGIC.dir/FuncGIC.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Nerve_GIC/FuncGIC.cpp [ 86%] Building CXX object example/Nerve_GIC/CMakeFiles/CoordGIC.dir/CoordGIC.cpp.o cd /build/gudhi-2.3.0+dfsg/build/example/Nerve_GIC && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/CoordGIC.dir/CoordGIC.cpp.o -c /build/gudhi-2.3.0+dfsg/example/Nerve_GIC/CoordGIC.cpp [ 86%] Linking CXX executable Skeleton_blocker_example_from_simplices cd /build/gudhi-2.3.0+dfsg/build/example/Skeleton_blocker && /usr/bin/cmake -E cmake_link_script CMakeFiles/Skeleton_blocker_example_from_simplices.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Skeleton_blocker_example_from_simplices.dir/Skeleton_blocker_from_simplices.cpp.o -o Skeleton_blocker_example_from_simplices -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 86%] Built target Skeleton_blocker_example_from_simplices make -f utilities/Nerve_GIC/CMakeFiles/VoronoiGIC.dir/build.make utilities/Nerve_GIC/CMakeFiles/VoronoiGIC.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Nerve_GIC /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Nerve_GIC /build/gudhi-2.3.0+dfsg/build/utilities/Nerve_GIC/CMakeFiles/VoronoiGIC.dir/DependInfo.cmake --color= Scanning dependencies of target VoronoiGIC make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Nerve_GIC/CMakeFiles/VoronoiGIC.dir/build.make utilities/Nerve_GIC/CMakeFiles/VoronoiGIC.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 87%] Building CXX object utilities/Nerve_GIC/CMakeFiles/VoronoiGIC.dir/VoronoiGIC.cpp.o cd /build/gudhi-2.3.0+dfsg/build/utilities/Nerve_GIC && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/VoronoiGIC.dir/VoronoiGIC.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Nerve_GIC/VoronoiGIC.cpp [ 87%] Linking CXX executable Skeleton_blocker_example_iteration cd /build/gudhi-2.3.0+dfsg/build/example/Skeleton_blocker && /usr/bin/cmake -E cmake_link_script CMakeFiles/Skeleton_blocker_example_iteration.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Skeleton_blocker_example_iteration.dir/Skeleton_blocker_iteration.cpp.o -o Skeleton_blocker_example_iteration -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 87%] Built target Skeleton_blocker_example_iteration make -f utilities/Nerve_GIC/CMakeFiles/Nerve.dir/build.make utilities/Nerve_GIC/CMakeFiles/Nerve.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Nerve_GIC /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Nerve_GIC /build/gudhi-2.3.0+dfsg/build/utilities/Nerve_GIC/CMakeFiles/Nerve.dir/DependInfo.cmake --color= Scanning dependencies of target Nerve make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Nerve_GIC/CMakeFiles/Nerve.dir/build.make utilities/Nerve_GIC/CMakeFiles/Nerve.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 87%] Building CXX object utilities/Nerve_GIC/CMakeFiles/Nerve.dir/Nerve.cpp.o cd /build/gudhi-2.3.0+dfsg/build/utilities/Nerve_GIC && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -std=gnu++11 -o CMakeFiles/Nerve.dir/Nerve.cpp.o -c /build/gudhi-2.3.0+dfsg/utilities/Nerve_GIC/Nerve.cpp [ 87%] Linking CXX executable Skeleton_blocker_example_link cd /build/gudhi-2.3.0+dfsg/build/example/Skeleton_blocker && /usr/bin/cmake -E cmake_link_script CMakeFiles/Skeleton_blocker_example_link.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Skeleton_blocker_example_link.dir/Skeleton_blocker_link.cpp.o -o Skeleton_blocker_example_link -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 87%] Built target Skeleton_blocker_example_link make -f GudhUI/CMakeFiles/GudhUI_autogen.dir/build.make GudhUI/CMakeFiles/GudhUI_autogen.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/GudhUI /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/GudhUI /build/gudhi-2.3.0+dfsg/build/GudhUI/CMakeFiles/GudhUI_autogen.dir/DependInfo.cmake --color= Scanning dependencies of target GudhUI_autogen make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f GudhUI/CMakeFiles/GudhUI_autogen.dir/build.make GudhUI/CMakeFiles/GudhUI_autogen.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 87%] Automatic MOC and UIC for target GudhUI cd /build/gudhi-2.3.0+dfsg/build/GudhUI && /usr/bin/cmake -E cmake_autogen /build/gudhi-2.3.0+dfsg/build/GudhUI/CMakeFiles/GudhUI_autogen.dir/AutogenInfo.cmake None AutoMoc warning --------------- "/build/gudhi-2.3.0+dfsg/GudhUI/gui/MainWindow.cpp" The file includes the moc file "MainWindow.moc", but does not contain a Q_OBJECT, Q_GADGET or Q_NAMESPACE macro. AutoMoc warning --------------- "/build/gudhi-2.3.0+dfsg/GudhUI/view/Viewer.cpp" The file includes the moc file "Viewer.moc", but does not contain a Q_OBJECT, Q_GADGET or Q_NAMESPACE macro. AutoMoc warning --------------- "/build/gudhi-2.3.0+dfsg/GudhUI/view/Viewer_instructor.cpp" The file includes the moc file "Viewer_instructor.moc", but does not contain a Q_OBJECT, Q_GADGET or Q_NAMESPACE macro. AutoMoc warning --------------- "/build/gudhi-2.3.0+dfsg/GudhUI/gui/Menu_persistence.cpp" The file includes the moc file "Menu_persistence.moc", but does not contain a Q_OBJECT, Q_GADGET or Q_NAMESPACE macro. AutoMoc warning --------------- "/build/gudhi-2.3.0+dfsg/GudhUI/gui/Menu_edge_contraction.cpp" The file includes the moc file "Menu_edge_contraction.moc", but does not contain a Q_OBJECT, Q_GADGET or Q_NAMESPACE macro. AutoMoc warning --------------- "/build/gudhi-2.3.0+dfsg/GudhUI/gui/Menu_k_nearest_neighbors.cpp" The file includes the moc file "Menu_k_nearest_neighbors.moc", but does not contain a Q_OBJECT, Q_GADGET or Q_NAMESPACE macro. AutoMoc warning --------------- "/build/gudhi-2.3.0+dfsg/GudhUI/gui/Menu_uniform_neighbors.cpp" The file includes the moc file "Menu_uniform_neighbors.moc", but does not contain a Q_OBJECT, Q_GADGET or Q_NAMESPACE macro. In file included from /build/gudhi-2.3.0+dfsg/include/gudhi/Tangential_complex/Simplicial_complex.h:28, from /build/gudhi-2.3.0+dfsg/include/gudhi/Tangential_complex.h:27, from /build/gudhi-2.3.0+dfsg/example/Tangential_complex/example_basic.cpp:1: /build/gudhi-2.3.0+dfsg/include/gudhi/Tangential_complex/Simplicial_complex.h: In member function 'void Gudhi::tangential_complex::internal::Simplicial_complex::collapse(int, bool)': /build/gudhi-2.3.0+dfsg/include/gudhi/Tangential_complex/Simplicial_complex.h:166:37: warning: comparison of integer expressions of different signedness: 'boost::container::dtl::flat_tree, std::less, boost::container::new_allocator >::size_type' {aka 'unsigned int'} and 'int' [-Wsign-compare] GUDHI_CHECK(it_Cf->size() == max_simplex_dim + 1, ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /build/gudhi-2.3.0+dfsg/include/gudhi/Debug_utils.h:35:44: note: in definition of macro 'GUDHI_CHECK' #define GUDHI_CHECK(expression, excpt) ((expression) ? (void) 0 : (throw excpt)) ^~~~~~~~~~ AutoMoc: /build/gudhi-2.3.0+dfsg/GudhUI/gui/Menu_persistence.cpp:0: Note: No relevant classes found. No output generated. AutoMoc: /build/gudhi-2.3.0+dfsg/GudhUI/gui/Menu_uniform_neighbors.cpp:0: Note: No relevant classes found. No output generated. AutoMoc: /build/gudhi-2.3.0+dfsg/GudhUI/gui/Menu_k_nearest_neighbors.cpp:0: Note: No relevant classes found. No output generated. [ 87%] Linking CXX executable Spatial_searching_example_spatial_searching cd /build/gudhi-2.3.0+dfsg/build/example/Spatial_searching && /usr/bin/cmake -E cmake_link_script CMakeFiles/Spatial_searching_example_spatial_searching.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Spatial_searching_example_spatial_searching.dir/example_spatial_searching.cpp.o -o Spatial_searching_example_spatial_searching -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp In file included from /build/gudhi-2.3.0+dfsg/include/gudhi/Tangential_complex/Simplicial_complex.h:28, from /build/gudhi-2.3.0+dfsg/include/gudhi/Tangential_complex.h:27, from /build/gudhi-2.3.0+dfsg/example/Tangential_complex/example_with_perturb.cpp:1: /build/gudhi-2.3.0+dfsg/include/gudhi/Tangential_complex/Simplicial_complex.h: In member function 'void Gudhi::tangential_complex::internal::Simplicial_complex::collapse(int, bool)': /build/gudhi-2.3.0+dfsg/include/gudhi/Tangential_complex/Simplicial_complex.h:166:37: warning: comparison of integer expressions of different signedness: 'boost::container::dtl::flat_tree, std::less, boost::container::new_allocator >::size_type' {aka 'unsigned int'} and 'int' [-Wsign-compare] GUDHI_CHECK(it_Cf->size() == max_simplex_dim + 1, ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /build/gudhi-2.3.0+dfsg/include/gudhi/Debug_utils.h:35:44: note: in definition of macro 'GUDHI_CHECK' #define GUDHI_CHECK(expression, excpt) ((expression) ? (void) 0 : (throw excpt)) ^~~~~~~~~~ make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 87%] Built target Spatial_searching_example_spatial_searching make -f cython/CMakeFiles/cython.dir/build.make cython/CMakeFiles/cython.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/cython /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/cython /build/gudhi-2.3.0+dfsg/build/cython/CMakeFiles/cython.dir/DependInfo.cmake --color= Scanning dependencies of target cython make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f cython/CMakeFiles/cython.dir/build.make cython/CMakeFiles/cython.dir/build /build/gudhi-2.3.0+dfsg/include/gudhi/Tangential_complex.h: In instantiation of 'void Gudhi::tangential_complex::Tangential_complex::update_star(std::size_t) [with Kernel_ = CGAL::Epick_d; DimensionTag = CGAL::Dynamic_dimension_tag; Concurrency_tag = CGAL::Parallel_tag; Triangulation_ = CGAL::Default; std::size_t = unsigned int]': /build/gudhi-2.3.0+dfsg/include/gudhi/Tangential_complex.h:1130:5: required from 'void Gudhi::tangential_complex::Tangential_complex::compute_tangent_triangulation(std::size_t, bool) [with Kernel_ = CGAL::Epick_d; DimensionTag = CGAL::Dynamic_dimension_tag; Concurrency_tag = CGAL::Parallel_tag; Triangulation_ = CGAL::Default; std::size_t = unsigned int]' /build/gudhi-2.3.0+dfsg/include/gudhi/Tangential_complex.h:360:57: required from 'void Gudhi::tangential_complex::Tangential_complex::compute_tangential_complex() [with Kernel_ = CGAL::Epick_d; DimensionTag = CGAL::Dynamic_dimension_tag; Concurrency_tag = CGAL::Parallel_tag; Triangulation_ = CGAL::Default]' /build/gudhi-2.3.0+dfsg/example/Tangential_complex/example_basic.cpp:36:33: required from here /build/gudhi-2.3.0+dfsg/include/gudhi/Tangential_complex.h:1160:43: warning: comparison of integer expressions of different signedness: 'boost::container::dtl::flat_tree, std::less, boost::container::new_allocator >::size_type' {aka 'unsigned int'} and 'int' [-Wsign-compare] GUDHI_CHECK(incident_simplex.size() == cur_dim_plus_1 - 1, /build/gudhi-2.3.0+dfsg/include/gudhi/Debug_utils.h:35:44: note: in definition of macro 'GUDHI_CHECK' #define GUDHI_CHECK(expression, excpt) ((expression) ? (void) 0 : (throw excpt)) ^~~~~~~~~~ make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 87%] Generating gudhi.so cd /build/gudhi-2.3.0+dfsg/build/cython && /usr/bin/python3.7 /build/gudhi-2.3.0+dfsg/build/cython/setup.py build_ext --inplace [ 88%] Linking CXX executable Simplex_tree_example_cech_complex_cgal_mini_sphere_3d cd /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree && /usr/bin/cmake -E cmake_link_script CMakeFiles/Simplex_tree_example_cech_complex_cgal_mini_sphere_3d.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Simplex_tree_example_cech_complex_cgal_mini_sphere_3d.dir/cech_complex_cgal_mini_sphere_3d.cpp.o -o Simplex_tree_example_cech_complex_cgal_mini_sphere_3d -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -lboost_program_options /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 88%] Built target Simplex_tree_example_cech_complex_cgal_mini_sphere_3d [ 89%] Linking CXX executable Subsampling_example_sparsify_point_set cd /build/gudhi-2.3.0+dfsg/build/example/Subsampling && /usr/bin/cmake -E cmake_link_script CMakeFiles/Subsampling_example_sparsify_point_set.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Subsampling_example_sparsify_point_set.dir/example_sparsify_point_set.cpp.o -o Subsampling_example_sparsify_point_set -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp Compiling /build/gudhi-2.3.0+dfsg/build/cython/gudhi.pyx because it changed. [1/1] Cythonizing /build/gudhi-2.3.0+dfsg/build/cython/gudhi.pyx running build_ext building 'gudhi' extension creating build creating build/temp.linux-x86_64-3.7 creating build/temp.linux-x86_64-3.7/build creating build/temp.linux-x86_64-3.7/build/gudhi-2.3.0+dfsg creating build/temp.linux-x86_64-3.7/build/gudhi-2.3.0+dfsg/build creating build/temp.linux-x86_64-3.7/build/gudhi-2.3.0+dfsg/build/cython i686-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/i386-linux-gnu -I/usr/include -I/usr/include -I/usr/include -I/usr/include/i386-linux-gnu -I/build/gudhi-2.3.0+dfsg/build -I/usr/include -I/usr/include -I/usr/include/eigen3 -I/usr/include -I/build/gudhi-2.3.0+dfsg/include -I/build/gudhi-2.3.0+dfsg/cython/include -I/usr/include -I/usr/include/python3.7m -c /build/gudhi-2.3.0+dfsg/build/cython/gudhi.cpp -o build/temp.linux-x86_64-3.7/build/gudhi-2.3.0+dfsg/build/cython/gudhi.o -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_ALL_NO_LIB -DBOOST_SYSTEM_NO_DEPRECATED -std=c++11 -frounding-math -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DGUDHI_USE_TBB -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 89%] Built target Subsampling_example_sparsify_point_set AutoMoc: /build/gudhi-2.3.0+dfsg/GudhUI/gui/Menu_edge_contraction.cpp:0: Note: No relevant classes found. No output generated. AutoMoc: /build/gudhi-2.3.0+dfsg/GudhUI/view/Viewer_instructor.cpp:0: Note: No relevant classes found. No output generated. AutoMoc: /build/gudhi-2.3.0+dfsg/GudhUI/view/Viewer.cpp:0: Note: No relevant classes found. No output generated. AutoMoc: /build/gudhi-2.3.0+dfsg/GudhUI/gui/MainWindow.cpp:0: Note: No relevant classes found. No output generated. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 89%] Built target GudhUI_autogen make -f GudhUI/CMakeFiles/GudhUI.dir/build.make GudhUI/CMakeFiles/GudhUI.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/GudhUI /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/GudhUI /build/gudhi-2.3.0+dfsg/build/GudhUI/CMakeFiles/GudhUI.dir/DependInfo.cmake --color= Scanning dependencies of target GudhUI make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f GudhUI/CMakeFiles/GudhUI.dir/build.make GudhUI/CMakeFiles/GudhUI.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 89%] Building CXX object GudhUI/CMakeFiles/GudhUI.dir/gui/gudhui.cpp.o cd /build/gudhi-2.3.0+dfsg/build/GudhUI && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/gudhi-2.3.0+dfsg/build/GudhUI -I/build/gudhi-2.3.0+dfsg/GudhUI -I/build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/include -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -fPIC -std=gnu++11 -o CMakeFiles/GudhUI.dir/gui/gudhui.cpp.o -c /build/gudhi-2.3.0+dfsg/GudhUI/gui/gudhui.cpp [ 90%] Building CXX object GudhUI/CMakeFiles/GudhUI.dir/gui/MainWindow.cpp.o cd /build/gudhi-2.3.0+dfsg/build/GudhUI && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/gudhi-2.3.0+dfsg/build/GudhUI -I/build/gudhi-2.3.0+dfsg/GudhUI -I/build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/include -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -fPIC -std=gnu++11 -o CMakeFiles/GudhUI.dir/gui/MainWindow.cpp.o -c /build/gudhi-2.3.0+dfsg/GudhUI/gui/MainWindow.cpp [ 90%] Building CXX object GudhUI/CMakeFiles/GudhUI.dir/gui/Menu_k_nearest_neighbors.cpp.o cd /build/gudhi-2.3.0+dfsg/build/GudhUI && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/gudhi-2.3.0+dfsg/build/GudhUI -I/build/gudhi-2.3.0+dfsg/GudhUI -I/build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/include -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -fPIC -std=gnu++11 -o CMakeFiles/GudhUI.dir/gui/Menu_k_nearest_neighbors.cpp.o -c /build/gudhi-2.3.0+dfsg/GudhUI/gui/Menu_k_nearest_neighbors.cpp /build/gudhi-2.3.0+dfsg/include/gudhi/Tangential_complex.h: In instantiation of 'void Gudhi::tangential_complex::Tangential_complex::update_star(std::size_t) [with Kernel_ = CGAL::Epick_d >; DimensionTag = CGAL::Dimension_tag<2>; Concurrency_tag = CGAL::Parallel_tag; Triangulation_ = CGAL::Default; std::size_t = unsigned int]': /build/gudhi-2.3.0+dfsg/include/gudhi/Tangential_complex.h:1130:5: required from 'void Gudhi::tangential_complex::Tangential_complex::compute_tangent_triangulation(std::size_t, bool) [with Kernel_ = CGAL::Epick_d >; DimensionTag = CGAL::Dimension_tag<2>; Concurrency_tag = CGAL::Parallel_tag; Triangulation_ = CGAL::Default; std::size_t = unsigned int]' /build/gudhi-2.3.0+dfsg/include/gudhi/Tangential_complex.h:360:57: required from 'void Gudhi::tangential_complex::Tangential_complex::compute_tangential_complex() [with Kernel_ = CGAL::Epick_d >; DimensionTag = CGAL::Dimension_tag<2>; Concurrency_tag = CGAL::Parallel_tag; Triangulation_ = CGAL::Default]' /build/gudhi-2.3.0+dfsg/example/Tangential_complex/example_with_perturb.cpp:43:33: required from here /build/gudhi-2.3.0+dfsg/include/gudhi/Tangential_complex.h:1160:43: warning: comparison of integer expressions of different signedness: 'boost::container::dtl::flat_tree, std::less, boost::container::new_allocator >::size_type' {aka 'unsigned int'} and 'int' [-Wsign-compare] GUDHI_CHECK(incident_simplex.size() == cur_dim_plus_1 - 1, /build/gudhi-2.3.0+dfsg/include/gudhi/Debug_utils.h:35:44: note: in definition of macro 'GUDHI_CHECK' #define GUDHI_CHECK(expression, excpt) ((expression) ? (void) 0 : (throw excpt)) ^~~~~~~~~~ [ 91%] Building CXX object GudhUI/CMakeFiles/GudhUI.dir/gui/Menu_uniform_neighbors.cpp.o cd /build/gudhi-2.3.0+dfsg/build/GudhUI && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/gudhi-2.3.0+dfsg/build/GudhUI -I/build/gudhi-2.3.0+dfsg/GudhUI -I/build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/include -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -fPIC -std=gnu++11 -o CMakeFiles/GudhUI.dir/gui/Menu_uniform_neighbors.cpp.o -c /build/gudhi-2.3.0+dfsg/GudhUI/gui/Menu_uniform_neighbors.cpp [ 91%] Linking CXX executable Witness_complex_example_nearest_landmark_table cd /build/gudhi-2.3.0+dfsg/build/example/Witness_complex && /usr/bin/cmake -E cmake_link_script CMakeFiles/Witness_complex_example_nearest_landmark_table.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Witness_complex_example_nearest_landmark_table.dir/example_nearest_landmark_table.cpp.o -o Witness_complex_example_nearest_landmark_table -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 91%] Built target Witness_complex_example_nearest_landmark_table [ 91%] Building CXX object GudhUI/CMakeFiles/GudhUI.dir/gui/Menu_edge_contraction.cpp.o cd /build/gudhi-2.3.0+dfsg/build/GudhUI && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/gudhi-2.3.0+dfsg/build/GudhUI -I/build/gudhi-2.3.0+dfsg/GudhUI -I/build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/include -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -fPIC -std=gnu++11 -o CMakeFiles/GudhUI.dir/gui/Menu_edge_contraction.cpp.o -c /build/gudhi-2.3.0+dfsg/GudhUI/gui/Menu_edge_contraction.cpp [ 92%] Building CXX object GudhUI/CMakeFiles/GudhUI.dir/gui/Menu_persistence.cpp.o cd /build/gudhi-2.3.0+dfsg/build/GudhUI && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/gudhi-2.3.0+dfsg/build/GudhUI -I/build/gudhi-2.3.0+dfsg/GudhUI -I/build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/include -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -fPIC -std=gnu++11 -o CMakeFiles/GudhUI.dir/gui/Menu_persistence.cpp.o -c /build/gudhi-2.3.0+dfsg/GudhUI/gui/Menu_persistence.cpp [ 92%] Linking CXX executable Witness_complex_example_off cd /build/gudhi-2.3.0+dfsg/build/example/Witness_complex && /usr/bin/cmake -E cmake_link_script CMakeFiles/Witness_complex_example_off.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Witness_complex_example_off.dir/example_witness_complex_off.cpp.o -o Witness_complex_example_off -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 92%] Built target Witness_complex_example_off [ 92%] Building CXX object GudhUI/CMakeFiles/GudhUI.dir/view/Viewer_instructor.cpp.o cd /build/gudhi-2.3.0+dfsg/build/GudhUI && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/gudhi-2.3.0+dfsg/build/GudhUI -I/build/gudhi-2.3.0+dfsg/GudhUI -I/build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/include -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -fPIC -std=gnu++11 -o CMakeFiles/GudhUI.dir/view/Viewer_instructor.cpp.o -c /build/gudhi-2.3.0+dfsg/GudhUI/view/Viewer_instructor.cpp [ 92%] Linking CXX executable Witness_complex_example_sphere cd /build/gudhi-2.3.0+dfsg/build/example/Witness_complex && /usr/bin/cmake -E cmake_link_script CMakeFiles/Witness_complex_example_sphere.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Witness_complex_example_sphere.dir/example_witness_complex_sphere.cpp.o -o Witness_complex_example_sphere -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 92%] Built target Witness_complex_example_sphere [ 93%] Building CXX object GudhUI/CMakeFiles/GudhUI.dir/view/Viewer.cpp.o cd /build/gudhi-2.3.0+dfsg/build/GudhUI && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/gudhi-2.3.0+dfsg/build/GudhUI -I/build/gudhi-2.3.0+dfsg/GudhUI -I/build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/include -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -fPIC -std=gnu++11 -o CMakeFiles/GudhUI.dir/view/Viewer.cpp.o -c /build/gudhi-2.3.0+dfsg/GudhUI/view/Viewer.cpp [ 93%] Linking CXX executable Witness_complex_example_strong_off cd /build/gudhi-2.3.0+dfsg/build/example/Witness_complex && /usr/bin/cmake -E cmake_link_script CMakeFiles/Witness_complex_example_strong_off.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Witness_complex_example_strong_off.dir/example_strong_witness_complex_off.cpp.o -o Witness_complex_example_strong_off -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -lmpfr -lgmpxx -lgmp [ 93%] Building CXX object GudhUI/CMakeFiles/GudhUI.dir/GudhUI_autogen/mocs_compilation.cpp.o cd /build/gudhi-2.3.0+dfsg/build/GudhUI && /usr/bin/c++ -DBOOST_ALL_DYN_LINK -DBOOST_ALL_NO_LIB -DBOOST_RESULT_OF_USE_DECLTYPE -DBOOST_SYSTEM_NO_DEPRECATED -DCGAL_EIGEN3_ENABLED -DCGAL_USE_GMP -DCGAL_USE_GMPXX -DCGAL_USE_GMPXX=1 -DCGAL_USE_MPFR -DGUDHI_CAN_USE_CXX11_THREAD_LOCAL -DGUDHI_USE_TBB -DNOMINMAX -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_OPENGL_LIB -DQT_WIDGETS_LIB -DQT_XML_LIB -I/build/gudhi-2.3.0+dfsg/build/GudhUI -I/build/gudhi-2.3.0+dfsg/GudhUI -I/build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/include -I/build/gudhi-2.3.0+dfsg/build -I/build/gudhi-2.3.0+dfsg/include -isystem /usr/include/i386-linux-gnu -isystem /usr/include/eigen3 -isystem /usr/include/i386-linux-gnu/qt5 -isystem /usr/include/i386-linux-gnu/qt5/QtWidgets -isystem /usr/include/i386-linux-gnu/qt5/QtGui -isystem /usr/include/i386-linux-gnu/qt5/QtCore -isystem /usr/lib/i386-linux-gnu/qt5/mkspecs/linux-g++ -isystem /usr/include/i386-linux-gnu/qt5/QtXml -isystem /usr/include/i386-linux-gnu/qt5/QtOpenGL -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -frounding-math -fPIC -std=gnu++11 -o CMakeFiles/GudhUI.dir/GudhUI_autogen/mocs_compilation.cpp.o -c /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/mocs_compilation.cpp In file included from /build/gudhi-2.3.0+dfsg/build/cython/gudhi.cpp:722: /build/gudhi-2.3.0+dfsg/cython/include/Alpha_complex_interface.h: In member function 'std::vector Gudhi::alpha_complex::Alpha_complex_interface::get_point(int)': /build/gudhi-2.3.0+dfsg/cython/include/Alpha_complex_interface.h:63:32: warning: catching polymorphic type 'class std::out_of_range' by value [-Wcatch-value=] } catch (std::out_of_range outofrange) { ^~~~~~~~~~ make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 93%] Built target Witness_complex_example_strong_off In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/smart_ptr/shared_array.hpp:21, from /usr/include/boost/shared_array.hpp:17, from /usr/include/boost/graph/detail/d_ary_heap.hpp:20, from /usr/include/boost/graph/named_function_params.hpp:24, from /usr/include/boost/graph/depth_first_search.hpp:21, from /usr/include/boost/graph/connected_components.hpp:15, from /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:37, from /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_geometric_complex.h:26, from /build/gudhi-2.3.0+dfsg/GudhUI/model/Complex_typedefs.h:28, from /build/gudhi-2.3.0+dfsg/GudhUI/view/Viewer.h:32, from /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/include/ui_main_window.h:22, from /build/gudhi-2.3.0+dfsg/GudhUI/gui/MainWindow.h:30, from /build/gudhi-2.3.0+dfsg/GudhUI/gui/gudhui.cpp:24: /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'int Gudhi::skeleton_blocker::Skeleton_blocker_complex::degree(Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-2.3.0+dfsg/GudhUI/model/Model.h:220:46: required from here /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:481:46: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'unsigned int'} [-Wsign-compare] assert(0 <= local.vertex && local.vertex < boost::num_vertices(skeleton)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Graph_vertex& Gudhi::skeleton_blocker::Skeleton_blocker_complex::operator[](Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Graph_vertex = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_geometric_complex.h:123:19: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Point& Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::point(Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Vertex_handle) [with SkeletonBlockerGeometricDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Point = CGAL::Point_d >; Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/GudhUI/model/Model.h:114:40: required from here /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:366:50: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'unsigned int'} [-Wsign-compare] 0 <= address.vertex && address.vertex < boost::num_vertices(skeleton)); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'const Graph_vertex& Gudhi::skeleton_blocker::Skeleton_blocker_complex::operator[](Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Graph_vertex = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:419:19: required from 'bool Gudhi::skeleton_blocker::Skeleton_blocker_complex::contains_vertex(Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_geometric_complex.h:122:5: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Point& Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::point(Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Vertex_handle) [with SkeletonBlockerGeometricDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Point = CGAL::Point_d >; Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/GudhUI/model/Model.h:114:40: required from here /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:376:50: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'unsigned int'} [-Wsign-compare] 0 <= address.vertex && address.vertex < boost::num_vertices(skeleton)); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Root_vertex_handle Gudhi::skeleton_blocker::Skeleton_blocker_complex::get_id(Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Root_vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Root_vertex_handle; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:585:7: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Edge_handle Gudhi::skeleton_blocker::Skeleton_blocker_complex::add_edge_without_blockers(Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle, Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Edge_handle = boost::detail::edge_desc_impl; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/GudhUI/utils/Rips_builder.h:63:11: required from 'void Rips_builder::compute_edges(double) [with SkBlComplex = Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex >]' /build/gudhi-2.3.0+dfsg/GudhUI/utils/Rips_builder.h:48:5: required from 'Rips_builder::Rips_builder(SkBlComplex&, double) [with SkBlComplex = Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex >]' /build/gudhi-2.3.0+dfsg/GudhUI/model/Model.h:175:55: required from here /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:456:46: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'unsigned int'} [-Wsign-compare] assert(0 <= local.vertex && local.vertex < boost::num_vertices(skeleton)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 93%] Linking CXX executable VoronoiGIC cd /build/gudhi-2.3.0+dfsg/build/utilities/Nerve_GIC && /usr/bin/cmake -E cmake_link_script CMakeFiles/VoronoiGIC.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/VoronoiGIC.dir/VoronoiGIC.cpp.o -o VoronoiGIC -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/smart_ptr/shared_array.hpp:21, from /usr/include/boost/shared_array.hpp:17, from /usr/include/boost/graph/detail/d_ary_heap.hpp:20, from /usr/include/boost/graph/named_function_params.hpp:24, from /usr/include/boost/graph/depth_first_search.hpp:21, from /usr/include/boost/graph/connected_components.hpp:15, from /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:37, from /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_geometric_complex.h:26, from /build/gudhi-2.3.0+dfsg/GudhUI/model/Complex_typedefs.h:28, from /build/gudhi-2.3.0+dfsg/GudhUI/view/Viewer.h:32, from /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/include/ui_main_window.h:22, from /build/gudhi-2.3.0+dfsg/GudhUI/gui/MainWindow.h:30, from /build/gudhi-2.3.0+dfsg/GudhUI/gui/MainWindow.cpp:23: /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'int Gudhi::skeleton_blocker::Skeleton_blocker_complex::degree(Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-2.3.0+dfsg/GudhUI/model/Model.h:220:46: required from here /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:481:46: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'unsigned int'} [-Wsign-compare] assert(0 <= local.vertex && local.vertex < boost::num_vertices(skeleton)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Graph_vertex& Gudhi::skeleton_blocker::Skeleton_blocker_complex::operator[](Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Graph_vertex = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_geometric_complex.h:123:19: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Point& Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::point(Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Vertex_handle) [with SkeletonBlockerGeometricDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Point = CGAL::Point_d >; Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/GudhUI/model/Model.h:114:40: required from here /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:366:50: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'unsigned int'} [-Wsign-compare] 0 <= address.vertex && address.vertex < boost::num_vertices(skeleton)); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 94%] Linking CXX executable Simplex_tree_example_alpha_shapes_3_from_off cd /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree && /usr/bin/cmake -E cmake_link_script CMakeFiles/Simplex_tree_example_alpha_shapes_3_from_off.dir/link.txt --verbose=1 [ 94%] Built target VoronoiGIC /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Simplex_tree_example_alpha_shapes_3_from_off.dir/example_alpha_shapes_3_simplex_tree_from_off_file.cpp.o -o Simplex_tree_example_alpha_shapes_3_from_off -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'const Graph_vertex& Gudhi::skeleton_blocker::Skeleton_blocker_complex::operator[](Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Graph_vertex = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:419:19: required from 'bool Gudhi::skeleton_blocker::Skeleton_blocker_complex::contains_vertex(Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_geometric_complex.h:122:5: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Point& Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::point(Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Vertex_handle) [with SkeletonBlockerGeometricDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Point = CGAL::Point_d >; Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/GudhUI/model/Model.h:114:40: required from here /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:376:50: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'unsigned int'} [-Wsign-compare] 0 <= address.vertex && address.vertex < boost::num_vertices(skeleton)); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 94%] Built target Simplex_tree_example_alpha_shapes_3_from_off /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Root_vertex_handle Gudhi::skeleton_blocker::Skeleton_blocker_complex::get_id(Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Root_vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Root_vertex_handle; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:585:7: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Edge_handle Gudhi::skeleton_blocker::Skeleton_blocker_complex::add_edge_without_blockers(Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle, Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Edge_handle = boost::detail::edge_desc_impl; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/GudhUI/utils/Rips_builder.h:63:11: required from 'void Rips_builder::compute_edges(double) [with SkBlComplex = Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex >]' /build/gudhi-2.3.0+dfsg/GudhUI/utils/Rips_builder.h:48:5: required from 'Rips_builder::Rips_builder(SkBlComplex&, double) [with SkBlComplex = Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex >]' /build/gudhi-2.3.0+dfsg/GudhUI/model/Model.h:175:55: required from here /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:456:46: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'unsigned int'} [-Wsign-compare] assert(0 <= local.vertex && local.vertex < boost::num_vertices(skeleton)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 94%] Linking CXX executable FuncGIC cd /build/gudhi-2.3.0+dfsg/build/example/Nerve_GIC && /usr/bin/cmake -E cmake_link_script CMakeFiles/FuncGIC.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/FuncGIC.dir/FuncGIC.cpp.o -o FuncGIC -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 94%] Built target FuncGIC In file included from /build/gudhi-2.3.0+dfsg/cython/include/Persistent_cohomology_interface.h:26, from /build/gudhi-2.3.0+dfsg/cython/include/Simplex_tree_interface.h:31, from /build/gudhi-2.3.0+dfsg/build/cython/gudhi.cpp:714: /build/gudhi-2.3.0+dfsg/include/gudhi/Persistent_cohomology.h: In instantiation of 'std::vector > Gudhi::persistent_cohomology::Persistent_cohomology::intervals_in_dimension(int) [with FilteredComplex = Gudhi::cubical_complex::Cubical_complex_interface<>; CoefficientField = Gudhi::persistent_cohomology::Field_Zp; typename FilteredComplex::Filtration_value = double]': /build/gudhi-2.3.0+dfsg/build/cython/gudhi.cpp:8023:87: required from here /build/gudhi-2.3.0+dfsg/include/gudhi/Persistent_cohomology.h:710:41: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare] if (cpx_->dimension(get<0>(pair)) == dimension) { /build/gudhi-2.3.0+dfsg/include/gudhi/Persistent_cohomology.h: In instantiation of 'std::vector > Gudhi::persistent_cohomology::Persistent_cohomology::intervals_in_dimension(int) [with FilteredComplex = Gudhi::cubical_complex::Cubical_complex_interface >; CoefficientField = Gudhi::persistent_cohomology::Field_Zp; typename FilteredComplex::Filtration_value = double]': /build/gudhi-2.3.0+dfsg/build/cython/gudhi.cpp:9503:87: required from here /build/gudhi-2.3.0+dfsg/include/gudhi/Persistent_cohomology.h:710:41: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare] In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/smart_ptr/shared_array.hpp:21, from /usr/include/boost/shared_array.hpp:17, from /usr/include/boost/graph/detail/d_ary_heap.hpp:20, from /usr/include/boost/graph/named_function_params.hpp:24, from /usr/include/boost/graph/depth_first_search.hpp:21, from /usr/include/boost/graph/connected_components.hpp:15, from /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:37, from /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_geometric_complex.h:26, from /build/gudhi-2.3.0+dfsg/GudhUI/model/Complex_typedefs.h:28, from /build/gudhi-2.3.0+dfsg/GudhUI/view/Viewer_instructor.h:36, from /build/gudhi-2.3.0+dfsg/GudhUI/view/Viewer_instructor.cpp:26: /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'const Graph_vertex& Gudhi::skeleton_blocker::Skeleton_blocker_complex::operator[](Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Graph_vertex = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_geometric_complex.h:115:19: required from 'const Point& Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::point(Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Vertex_handle) const [with SkeletonBlockerGeometricDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Point = CGAL::Point_d >; Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/GudhUI/view/Viewer_instructor.cpp:55:36: required from here /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:376:50: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'unsigned int'} [-Wsign-compare] 0 <= address.vertex && address.vertex < boost::num_vertices(skeleton)); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Graph_vertex& Gudhi::skeleton_blocker::Skeleton_blocker_complex::operator[](Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Graph_vertex = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:387:12: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle Gudhi::skeleton_blocker::Skeleton_blocker_complex::add_vertex() [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:169:7: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Skeleton_blocker_complex(size_t, Gudhi::skeleton_blocker::Skeleton_blocker_complex::Visitor*) [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; size_t = unsigned int; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Visitor = Gudhi::skeleton_blocker::Skeleton_blocker_complex_visitor; typename SkeletonBlockerDS::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker/Skeleton_blocker_sub_complex.h:58:7: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::Skeleton_blocker_link_complex(const ComplexType&, Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::Vertex_handle, bool) [with ComplexType = Gudhi::skeleton_blocker::Skeleton_blocker_complex >; Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker/Skeleton_blocker_link_superior.h:68:73: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_link_superior::Skeleton_blocker_link_superior(const ComplexType&, Gudhi::skeleton_blocker::Skeleton_blocker_link_superior::Vertex_handle) [with ComplexType = Gudhi::skeleton_blocker::Skeleton_blocker_complex >; Gudhi::skeleton_blocker::Skeleton_blocker_link_superior::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker/iterators/Skeleton_blockers_triangles_iterators.h:60:39: required from 'Gudhi::skeleton_blocker::Triangle_around_vertex_iterator::Triangle_around_vertex_iterator(const Complex*, Gudhi::skeleton_blocker::Triangle_around_vertex_iterator::Vertex_handle) [with Complex = Gudhi::skeleton_blocker::Skeleton_blocker_complex >; LinkType = Gudhi::skeleton_blocker::Skeleton_blocker_link_superior > >; Gudhi::skeleton_blocker::Triangle_around_vertex_iterator::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker/iterators/Skeleton_blockers_triangles_iterators.h:140:20: required from 'Gudhi::skeleton_blocker::Triangle_iterator::Triangle_iterator(const SkeletonBlockerComplex*) [with SkeletonBlockerComplex = Gudhi::skeleton_blocker::Skeleton_blocker_complex >]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:1391:20: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Complex_triangle_range Gudhi::skeleton_blocker::Skeleton_blocker_complex::triangle_range() const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Complex_triangle_range = boost::iterator_range > > >]' /build/gudhi-2.3.0+dfsg/GudhUI/view/Viewer_instructor.cpp:124:47: required from here /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:366:50: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'unsigned int'} [-Wsign-compare] 0 <= address.vertex && address.vertex < boost::num_vertices(skeleton)); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Root_vertex_handle Gudhi::skeleton_blocker::Skeleton_blocker_complex::get_id(Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Root_vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Root_vertex_handle; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_link_complex.h:139:11: required from 'void Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::compute_link_vertices(const ComplexType&, const Simplex&, bool, bool) [with ComplexType = Gudhi::skeleton_blocker::Skeleton_blocker_complex >; Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::Simplex = Gudhi::skeleton_blocker::Skeleton_blocker_simplex]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_link_complex.h:271:5: required from 'void Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::build_link(const ComplexType&, const Simplex&, bool, bool) [with ComplexType = Gudhi::skeleton_blocker::Skeleton_blocker_complex >; Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::Simplex = Gudhi::skeleton_blocker::Skeleton_blocker_simplex]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_link_complex.h:89:5: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::Skeleton_blocker_link_complex(const ComplexType&, Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::Vertex_handle, bool) [with ComplexType = Gudhi::skeleton_blocker::Skeleton_blocker_complex >; Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker/Skeleton_blocker_link_superior.h:68:73: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_link_superior::Skeleton_blocker_link_superior(const ComplexType&, Gudhi::skeleton_blocker::Skeleton_blocker_link_superior::Vertex_handle) [with ComplexType = Gudhi::skeleton_blocker::Skeleton_blocker_complex >; Gudhi::skeleton_blocker::Skeleton_blocker_link_superior::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker/iterators/Skeleton_blockers_triangles_iterators.h:60:39: required from 'Gudhi::skeleton_blocker::Triangle_around_vertex_iterator::Triangle_around_vertex_iterator(const Complex*, Gudhi::skeleton_blocker::Triangle_around_vertex_iterator::Vertex_handle) [with Complex = Gudhi::skeleton_blocker::Skeleton_blocker_complex >; LinkType = Gudhi::skeleton_blocker::Skeleton_blocker_link_superior > >; Gudhi::skeleton_blocker::Triangle_around_vertex_iterator::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker/iterators/Skeleton_blockers_triangles_iterators.h:140:20: required from 'Gudhi::skeleton_blocker::Triangle_iterator::Triangle_iterator(const SkeletonBlockerComplex*) [with SkeletonBlockerComplex = Gudhi::skeleton_blocker::Skeleton_blocker_complex >]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:1391:20: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Complex_triangle_range Gudhi::skeleton_blocker::Skeleton_blocker_complex::triangle_range() const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Complex_triangle_range = boost::iterator_range > > >]' /build/gudhi-2.3.0+dfsg/GudhUI/view/Viewer_instructor.cpp:124:47: required from here /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:456:46: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'unsigned int'} [-Wsign-compare] assert(0 <= local.vertex && local.vertex < boost::num_vertices(skeleton)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'int Gudhi::skeleton_blocker::Skeleton_blocker_complex::degree(Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_link_complex.h:153:5: required from 'void Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::compute_link_vertices(const ComplexType&, Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::Vertex_handle, bool) [with ComplexType = Gudhi::skeleton_blocker::Skeleton_blocker_complex >; Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_link_complex.h:118:7: required from 'void Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::compute_link_vertices(const ComplexType&, const Simplex&, bool, bool) [with ComplexType = Gudhi::skeleton_blocker::Skeleton_blocker_complex >; Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::Simplex = Gudhi::skeleton_blocker::Skeleton_blocker_simplex]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_link_complex.h:271:5: required from 'void Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::build_link(const ComplexType&, const Simplex&, bool, bool) [with ComplexType = Gudhi::skeleton_blocker::Skeleton_blocker_complex >; Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::Simplex = Gudhi::skeleton_blocker::Skeleton_blocker_simplex]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_link_complex.h:89:5: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::Skeleton_blocker_link_complex(const ComplexType&, Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::Vertex_handle, bool) [with ComplexType = Gudhi::skeleton_blocker::Skeleton_blocker_complex >; Gudhi::skeleton_blocker::Skeleton_blocker_link_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker/Skeleton_blocker_link_superior.h:68:73: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_link_superior::Skeleton_blocker_link_superior(const ComplexType&, Gudhi::skeleton_blocker::Skeleton_blocker_link_superior::Vertex_handle) [with ComplexType = Gudhi::skeleton_blocker::Skeleton_blocker_complex >; Gudhi::skeleton_blocker::Skeleton_blocker_link_superior::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker/iterators/Skeleton_blockers_triangles_iterators.h:60:39: required from 'Gudhi::skeleton_blocker::Triangle_around_vertex_iterator::Triangle_around_vertex_iterator(const Complex*, Gudhi::skeleton_blocker::Triangle_around_vertex_iterator::Vertex_handle) [with Complex = Gudhi::skeleton_blocker::Skeleton_blocker_complex >; LinkType = Gudhi::skeleton_blocker::Skeleton_blocker_link_superior > >; Gudhi::skeleton_blocker::Triangle_around_vertex_iterator::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker/iterators/Skeleton_blockers_triangles_iterators.h:140:20: required from 'Gudhi::skeleton_blocker::Triangle_iterator::Triangle_iterator(const SkeletonBlockerComplex*) [with SkeletonBlockerComplex = Gudhi::skeleton_blocker::Skeleton_blocker_complex >]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:1391:20: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Complex_triangle_range Gudhi::skeleton_blocker::Skeleton_blocker_complex::triangle_range() const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Complex_triangle_range = boost::iterator_range > > >]' /build/gudhi-2.3.0+dfsg/GudhUI/view/Viewer_instructor.cpp:124:47: required from here /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:481:46: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'unsigned int'} [-Wsign-compare] assert(0 <= local.vertex && local.vertex < boost::num_vertices(skeleton)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/smart_ptr/shared_array.hpp:21, from /usr/include/boost/shared_array.hpp:17, from /usr/include/boost/graph/detail/d_ary_heap.hpp:20, from /usr/include/boost/graph/named_function_params.hpp:24, from /usr/include/boost/graph/depth_first_search.hpp:21, from /usr/include/boost/graph/connected_components.hpp:15, from /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:37, from /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_geometric_complex.h:26, from /build/gudhi-2.3.0+dfsg/GudhUI/model/Complex_typedefs.h:28, from /build/gudhi-2.3.0+dfsg/GudhUI/view/Viewer.h:32, from /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/include/ui_main_window.h:22, from /build/gudhi-2.3.0+dfsg/GudhUI/gui/MainWindow.h:30, from /build/gudhi-2.3.0+dfsg/GudhUI/gui/Menu_edge_contraction.h:26, from /build/gudhi-2.3.0+dfsg/GudhUI/gui/Menu_edge_contraction.cpp:26: /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'int Gudhi::skeleton_blocker::Skeleton_blocker_complex::degree(Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-2.3.0+dfsg/GudhUI/model/Model.h:220:46: required from here /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:481:46: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'unsigned int'} [-Wsign-compare] assert(0 <= local.vertex && local.vertex < boost::num_vertices(skeleton)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Graph_vertex& Gudhi::skeleton_blocker::Skeleton_blocker_complex::operator[](Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Graph_vertex = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_geometric_complex.h:123:19: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Point& Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::point(Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Vertex_handle) [with SkeletonBlockerGeometricDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Point = CGAL::Point_d >; Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/GudhUI/model/Model.h:114:40: required from here /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:366:50: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'unsigned int'} [-Wsign-compare] 0 <= address.vertex && address.vertex < boost::num_vertices(skeleton)); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'const Graph_vertex& Gudhi::skeleton_blocker::Skeleton_blocker_complex::operator[](Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Graph_vertex = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:419:19: required from 'bool Gudhi::skeleton_blocker::Skeleton_blocker_complex::contains_vertex(Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_geometric_complex.h:122:5: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Point& Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::point(Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Vertex_handle) [with SkeletonBlockerGeometricDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Point = CGAL::Point_d >; Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/GudhUI/model/Model.h:114:40: required from here /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:376:50: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'unsigned int'} [-Wsign-compare] 0 <= address.vertex && address.vertex < boost::num_vertices(skeleton)); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Root_vertex_handle Gudhi::skeleton_blocker::Skeleton_blocker_complex::get_id(Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Root_vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Root_vertex_handle; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:585:7: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Edge_handle Gudhi::skeleton_blocker::Skeleton_blocker_complex::add_edge_without_blockers(Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle, Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Edge_handle = boost::detail::edge_desc_impl; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/GudhUI/utils/Rips_builder.h:63:11: required from 'void Rips_builder::compute_edges(double) [with SkBlComplex = Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex >]' /build/gudhi-2.3.0+dfsg/GudhUI/utils/Rips_builder.h:48:5: required from 'Rips_builder::Rips_builder(SkBlComplex&, double) [with SkBlComplex = Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex >]' /build/gudhi-2.3.0+dfsg/GudhUI/model/Model.h:175:55: required from here /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:456:46: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'unsigned int'} [-Wsign-compare] assert(0 <= local.vertex && local.vertex < boost::num_vertices(skeleton)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 95%] Linking CXX executable Nerve cd /build/gudhi-2.3.0+dfsg/build/utilities/Nerve_GIC && /usr/bin/cmake -E cmake_link_script CMakeFiles/Nerve.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Nerve.dir/Nerve.cpp.o -o Nerve -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 95%] Built target Nerve In file included from /usr/include/boost/assert.hpp:58, from /usr/include/boost/smart_ptr/shared_array.hpp:21, from /usr/include/boost/shared_array.hpp:17, from /usr/include/boost/graph/detail/d_ary_heap.hpp:20, from /usr/include/boost/graph/named_function_params.hpp:24, from /usr/include/boost/graph/depth_first_search.hpp:21, from /usr/include/boost/graph/connected_components.hpp:15, from /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:37, from /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_geometric_complex.h:26, from /build/gudhi-2.3.0+dfsg/GudhUI/model/Complex_typedefs.h:28, from /build/gudhi-2.3.0+dfsg/GudhUI/view/Viewer.h:32, from /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/include/ui_main_window.h:22, from /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/DMHXEJ42XS/../../../../GudhUI/gui/MainWindow.h:30, from /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/DMHXEJ42XS/moc_MainWindow.cpp:9, from /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/mocs_compilation.cpp:2: /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'int Gudhi::skeleton_blocker::Skeleton_blocker_complex::degree(Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-2.3.0+dfsg/GudhUI/model/Model.h:220:46: required from here /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:481:46: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'unsigned int'} [-Wsign-compare] assert(0 <= local.vertex && local.vertex < boost::num_vertices(skeleton)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Graph_vertex& Gudhi::skeleton_blocker::Skeleton_blocker_complex::operator[](Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Graph_vertex = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_geometric_complex.h:123:19: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Point& Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::point(Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Vertex_handle) [with SkeletonBlockerGeometricDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Point = CGAL::Point_d >; Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/GudhUI/model/Model.h:114:40: required from here /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:366:50: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'unsigned int'} [-Wsign-compare] 0 <= address.vertex && address.vertex < boost::num_vertices(skeleton)); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'const Graph_vertex& Gudhi::skeleton_blocker::Skeleton_blocker_complex::operator[](Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Graph_vertex = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:419:19: required from 'bool Gudhi::skeleton_blocker::Skeleton_blocker_complex::contains_vertex(Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_geometric_complex.h:122:5: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Point& Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::point(Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Vertex_handle) [with SkeletonBlockerGeometricDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Point = CGAL::Point_d >; Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/GudhUI/model/Model.h:114:40: required from here /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:376:50: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'unsigned int'} [-Wsign-compare] 0 <= address.vertex && address.vertex < boost::num_vertices(skeleton)); ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [ 96%] Linking CXX executable Witness_complex_weak_witness_persistence cd /build/gudhi-2.3.0+dfsg/build/utilities/Witness_complex && /usr/bin/cmake -E cmake_link_script CMakeFiles/Witness_complex_weak_witness_persistence.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Witness_complex_weak_witness_persistence.dir/weak_witness_persistence.cpp.o -o Witness_complex_weak_witness_persistence -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -lboost_program_options -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h: In instantiation of 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Root_vertex_handle Gudhi::skeleton_blocker::Skeleton_blocker_complex::get_id(Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) const [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Root_vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Root_vertex_handle; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]': /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:585:7: required from 'Gudhi::skeleton_blocker::Skeleton_blocker_complex::Edge_handle Gudhi::skeleton_blocker::Skeleton_blocker_complex::add_edge_without_blockers(Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle, Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle) [with SkeletonBlockerDS = Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Edge_handle = boost::detail::edge_desc_impl; Gudhi::skeleton_blocker::Skeleton_blocker_complex::Vertex_handle = Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle]' /build/gudhi-2.3.0+dfsg/GudhUI/utils/Rips_builder.h:63:11: required from 'void Rips_builder::compute_edges(double) [with SkBlComplex = Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex >]' /build/gudhi-2.3.0+dfsg/GudhUI/utils/Rips_builder.h:48:5: required from 'Rips_builder::Rips_builder(SkBlComplex&, double) [with SkBlComplex = Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex >]' /build/gudhi-2.3.0+dfsg/GudhUI/model/Model.h:175:55: required from here /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h:456:46: warning: comparison of integer expressions of different signedness: 'Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Vertex_handle::boost_vertex_handle' {aka 'int'} and 'boost::detail::adj_list_gen::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>, boost::vecS, boost::setS, boost::undirectedS, Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex, Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Graph_edge, boost::no_property, boost::listS>::config::vertices_size_type' {aka 'unsigned int'} [-Wsign-compare] assert(0 <= local.vertex && local.vertex < boost::num_vertices(skeleton)); ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 96%] Built target Witness_complex_weak_witness_persistence [ 96%] Linking CXX executable Witness_complex_strong_witness_persistence cd /build/gudhi-2.3.0+dfsg/build/utilities/Witness_complex && /usr/bin/cmake -E cmake_link_script CMakeFiles/Witness_complex_strong_witness_persistence.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Witness_complex_strong_witness_persistence.dir/strong_witness_persistence.cpp.o -o Witness_complex_strong_witness_persistence -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -lboost_program_options -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp [ 96%] Linking CXX executable CoordGIC cd /build/gudhi-2.3.0+dfsg/build/example/Nerve_GIC && /usr/bin/cmake -E cmake_link_script CMakeFiles/CoordGIC.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/CoordGIC.dir/CoordGIC.cpp.o -o CoordGIC -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 96%] Built target Witness_complex_strong_witness_persistence make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 96%] Built target CoordGIC [ 96%] Linking CXX executable custom_persistence_sort cd /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology && /usr/bin/cmake -E cmake_link_script CMakeFiles/custom_persistence_sort.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/custom_persistence_sort.dir/custom_persistence_sort.cpp.o -o custom_persistence_sort -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 96%] Built target custom_persistence_sort [ 97%] Linking CXX executable GudhUI cd /build/gudhi-2.3.0+dfsg/build/GudhUI && /usr/bin/cmake -E cmake_link_script CMakeFiles/GudhUI.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/GudhUI.dir/gui/gudhui.cpp.o CMakeFiles/GudhUI.dir/gui/MainWindow.cpp.o CMakeFiles/GudhUI.dir/gui/Menu_k_nearest_neighbors.cpp.o CMakeFiles/GudhUI.dir/gui/Menu_uniform_neighbors.cpp.o CMakeFiles/GudhUI.dir/gui/Menu_edge_contraction.cpp.o CMakeFiles/GudhUI.dir/gui/Menu_persistence.cpp.o CMakeFiles/GudhUI.dir/view/Viewer_instructor.cpp.o CMakeFiles/GudhUI.dir/view/Viewer.cpp.o CMakeFiles/GudhUI.dir/GudhUI_autogen/mocs_compilation.cpp.o -o GudhUI -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 /usr/lib/i386-linux-gnu/libQt5Xml.so.5.11.3 /usr/lib/i386-linux-gnu/libQt5OpenGL.so.5.11.3 -lQGLViewer-qt5 -lGL -lGLU -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libQt5Widgets.so.5.11.3 /usr/lib/i386-linux-gnu/libQt5Gui.so.5.11.3 /usr/lib/i386-linux-gnu/libQt5Core.so.5.11.3 make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 97%] Built target GudhUI [ 98%] Linking CXX executable Tangential_complex_example_basic cd /build/gudhi-2.3.0+dfsg/build/example/Tangential_complex && /usr/bin/cmake -E cmake_link_script CMakeFiles/Tangential_complex_example_basic.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Tangential_complex_example_basic.dir/example_basic.cpp.o -o Tangential_complex_example_basic -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 98%] Built target Tangential_complex_example_basic [ 98%] Linking CXX executable Tangential_complex_example_with_perturb cd /build/gudhi-2.3.0+dfsg/build/example/Tangential_complex && /usr/bin/cmake -E cmake_link_script CMakeFiles/Tangential_complex_example_with_perturb.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/Tangential_complex_example_with_perturb.dir/example_with_perturb.cpp.o -o Tangential_complex_example_with_perturb -lmpfr -lgmpxx -lgmp /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 /usr/lib/i386-linux-gnu/libCGAL.so.13.0.2 -ltbb -ltbbmalloc -pthread -latomic -lmpfr -lgmpxx -lgmp make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 98%] Built target Tangential_complex_example_with_perturb i686-linux-gnu-g++ -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/gudhi-2.3.0+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-3.7/build/gudhi-2.3.0+dfsg/build/cython/gudhi.o -L/usr//lib/i386-linux-gnu -lCGAL -lboost_system -lgmp -lgmpxx -ltbb -ltbbmalloc -o /build/gudhi-2.3.0+dfsg/build/cython/gudhi.cpython-37m-i386-linux-gnu.so /usr/lib/python3/dist-packages/Cython/Compiler/Main.py:367: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! 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/build/gudhi-2.3.0+dfsg/utilities/Witness_complex Reading and parsing tag files Parsing files Preprocessing /build/gudhi-2.3.0+dfsg/build/CMakeFiles/3.13.4/CompilerIdC/CMakeCCompilerId.c... 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Reading /build/gudhi-2.3.0+dfsg/cython/example/rips_complex_diagram_persistence_from_off_file_example.py... Parsing file /build/gudhi-2.3.0+dfsg/cython/example/rips_complex_diagram_persistence_from_off_file_example.py... Reading /build/gudhi-2.3.0+dfsg/cython/example/rips_complex_from_points_example.py... Parsing file /build/gudhi-2.3.0+dfsg/cython/example/rips_complex_from_points_example.py... Reading /build/gudhi-2.3.0+dfsg/cython/example/rips_persistence_diagram.py... Parsing file /build/gudhi-2.3.0+dfsg/cython/example/rips_persistence_diagram.py... Reading /build/gudhi-2.3.0+dfsg/cython/example/simplex_tree_example.py... Parsing file /build/gudhi-2.3.0+dfsg/cython/example/simplex_tree_example.py... Reading /build/gudhi-2.3.0+dfsg/cython/example/tangential_complex_plain_homology_from_off_file_example.py... Parsing file /build/gudhi-2.3.0+dfsg/cython/example/tangential_complex_plain_homology_from_off_file_example.py... Reading /build/gudhi-2.3.0+dfsg/cython/example/voronoi_graph_induced_complex.py... Parsing file /build/gudhi-2.3.0+dfsg/cython/example/voronoi_graph_induced_complex.py... Reading /build/gudhi-2.3.0+dfsg/cython/example/witness_complex_from_nearest_landmark_table.py... Parsing file /build/gudhi-2.3.0+dfsg/cython/example/witness_complex_from_nearest_landmark_table.py... Preprocessing /build/gudhi-2.3.0+dfsg/cython/include/Alpha_complex_interface.h... Parsing file /build/gudhi-2.3.0+dfsg/cython/include/Alpha_complex_interface.h... Preprocessing /build/gudhi-2.3.0+dfsg/cython/include/Bottleneck_distance_interface.h... Parsing file /build/gudhi-2.3.0+dfsg/cython/include/Bottleneck_distance_interface.h... Preprocessing /build/gudhi-2.3.0+dfsg/cython/include/Cubical_complex_interface.h... Parsing file /build/gudhi-2.3.0+dfsg/cython/include/Cubical_complex_interface.h... Preprocessing /build/gudhi-2.3.0+dfsg/cython/include/Euclidean_strong_witness_complex_interface.h... Parsing file /build/gudhi-2.3.0+dfsg/cython/include/Euclidean_strong_witness_complex_interface.h... Preprocessing /build/gudhi-2.3.0+dfsg/cython/include/Euclidean_witness_complex_interface.h... Parsing file /build/gudhi-2.3.0+dfsg/cython/include/Euclidean_witness_complex_interface.h... Preprocessing /build/gudhi-2.3.0+dfsg/cython/include/Nerve_gic_interface.h... Parsing file /build/gudhi-2.3.0+dfsg/cython/include/Nerve_gic_interface.h... Preprocessing /build/gudhi-2.3.0+dfsg/cython/include/Off_reader_interface.h... Parsing file /build/gudhi-2.3.0+dfsg/cython/include/Off_reader_interface.h... Preprocessing /build/gudhi-2.3.0+dfsg/cython/include/Persistent_cohomology_interface.h... Parsing file /build/gudhi-2.3.0+dfsg/cython/include/Persistent_cohomology_interface.h... Preprocessing /build/gudhi-2.3.0+dfsg/cython/include/Reader_utils_interface.h... Parsing file /build/gudhi-2.3.0+dfsg/cython/include/Reader_utils_interface.h... Preprocessing /build/gudhi-2.3.0+dfsg/cython/include/Rips_complex_interface.h... Parsing file /build/gudhi-2.3.0+dfsg/cython/include/Rips_complex_interface.h... Preprocessing /build/gudhi-2.3.0+dfsg/cython/include/Simplex_tree_interface.h... Parsing file /build/gudhi-2.3.0+dfsg/cython/include/Simplex_tree_interface.h... Preprocessing /build/gudhi-2.3.0+dfsg/cython/include/Strong_witness_complex_interface.h... Parsing file /build/gudhi-2.3.0+dfsg/cython/include/Strong_witness_complex_interface.h... Preprocessing /build/gudhi-2.3.0+dfsg/cython/include/Subsampling_interface.h... Parsing file /build/gudhi-2.3.0+dfsg/cython/include/Subsampling_interface.h... Preprocessing /build/gudhi-2.3.0+dfsg/cython/include/Tangential_complex_interface.h... Parsing file /build/gudhi-2.3.0+dfsg/cython/include/Tangential_complex_interface.h... Preprocessing /build/gudhi-2.3.0+dfsg/cython/include/Witness_complex_interface.h... Parsing file /build/gudhi-2.3.0+dfsg/cython/include/Witness_complex_interface.h... Reading /build/gudhi-2.3.0+dfsg/cython/test/test_alpha_complex.py... Parsing file /build/gudhi-2.3.0+dfsg/cython/test/test_alpha_complex.py... Reading /build/gudhi-2.3.0+dfsg/cython/test/test_bottleneck_distance.py... Parsing file /build/gudhi-2.3.0+dfsg/cython/test/test_bottleneck_distance.py... Reading /build/gudhi-2.3.0+dfsg/cython/test/test_cover_complex.py... Parsing file /build/gudhi-2.3.0+dfsg/cython/test/test_cover_complex.py... Reading /build/gudhi-2.3.0+dfsg/cython/test/test_cubical_complex.py... Parsing file /build/gudhi-2.3.0+dfsg/cython/test/test_cubical_complex.py... Reading /build/gudhi-2.3.0+dfsg/cython/test/test_euclidean_witness_complex.py... Parsing file /build/gudhi-2.3.0+dfsg/cython/test/test_euclidean_witness_complex.py... Reading /build/gudhi-2.3.0+dfsg/cython/test/test_reader_utils.py... Parsing file /build/gudhi-2.3.0+dfsg/cython/test/test_reader_utils.py... Reading /build/gudhi-2.3.0+dfsg/cython/test/test_rips_complex.py... Parsing file /build/gudhi-2.3.0+dfsg/cython/test/test_rips_complex.py... Reading /build/gudhi-2.3.0+dfsg/cython/test/test_simplex_tree.py... Parsing file /build/gudhi-2.3.0+dfsg/cython/test/test_simplex_tree.py... Reading /build/gudhi-2.3.0+dfsg/cython/test/test_subsampling.py... Parsing file /build/gudhi-2.3.0+dfsg/cython/test/test_subsampling.py... Reading /build/gudhi-2.3.0+dfsg/cython/test/test_tangential_complex.py... Parsing file /build/gudhi-2.3.0+dfsg/cython/test/test_tangential_complex.py... Reading /build/gudhi-2.3.0+dfsg/cython/test/test_witness_complex.py... Parsing file /build/gudhi-2.3.0+dfsg/cython/test/test_witness_complex.py... Reading /build/gudhi-2.3.0+dfsg/debian/tests/python-upstream.py... Parsing file /build/gudhi-2.3.0+dfsg/debian/tests/python-upstream.py... Preprocessing /build/gudhi-2.3.0+dfsg/doc/Alpha_complex/Intro_alpha_complex.h... Parsing file /build/gudhi-2.3.0+dfsg/doc/Alpha_complex/Intro_alpha_complex.h... Preprocessing /build/gudhi-2.3.0+dfsg/doc/Bitmap_cubical_complex/Gudhi_Cubical_Complex_doc.h... Parsing file /build/gudhi-2.3.0+dfsg/doc/Bitmap_cubical_complex/Gudhi_Cubical_Complex_doc.h... Preprocessing /build/gudhi-2.3.0+dfsg/doc/Bottleneck_distance/Intro_bottleneck_distance.h... Parsing file /build/gudhi-2.3.0+dfsg/doc/Bottleneck_distance/Intro_bottleneck_distance.h... Preprocessing /build/gudhi-2.3.0+dfsg/doc/Cech_complex/Intro_cech_complex.h... Parsing file /build/gudhi-2.3.0+dfsg/doc/Cech_complex/Intro_cech_complex.h... Preprocessing /build/gudhi-2.3.0+dfsg/doc/common/examples.h... Parsing file /build/gudhi-2.3.0+dfsg/doc/common/examples.h... Preprocessing /build/gudhi-2.3.0+dfsg/doc/common/file_formats.h... Parsing file /build/gudhi-2.3.0+dfsg/doc/common/file_formats.h... Preprocessing /build/gudhi-2.3.0+dfsg/doc/common/installation.h... Parsing file /build/gudhi-2.3.0+dfsg/doc/common/installation.h... Preprocessing /build/gudhi-2.3.0+dfsg/doc/common/main_page.h... Parsing file /build/gudhi-2.3.0+dfsg/doc/common/main_page.h... Preprocessing /build/gudhi-2.3.0+dfsg/doc/Nerve_GIC/Intro_graph_induced_complex.h... Parsing file /build/gudhi-2.3.0+dfsg/doc/Nerve_GIC/Intro_graph_induced_complex.h... Preprocessing /build/gudhi-2.3.0+dfsg/doc/Persistence_representations/Persistence_representations_doc.h... Parsing file /build/gudhi-2.3.0+dfsg/doc/Persistence_representations/Persistence_representations_doc.h... Preprocessing /build/gudhi-2.3.0+dfsg/doc/Persistent_cohomology/Intro_persistent_cohomology.h... Parsing file /build/gudhi-2.3.0+dfsg/doc/Persistent_cohomology/Intro_persistent_cohomology.h... Preprocessing /build/gudhi-2.3.0+dfsg/doc/Rips_complex/Intro_rips_complex.h... Parsing file /build/gudhi-2.3.0+dfsg/doc/Rips_complex/Intro_rips_complex.h... Preprocessing /build/gudhi-2.3.0+dfsg/doc/Simplex_tree/Intro_simplex_tree.h... Parsing file /build/gudhi-2.3.0+dfsg/doc/Simplex_tree/Intro_simplex_tree.h... Preprocessing /build/gudhi-2.3.0+dfsg/doc/Spatial_searching/Intro_spatial_searching.h... Parsing file /build/gudhi-2.3.0+dfsg/doc/Spatial_searching/Intro_spatial_searching.h... Preprocessing /build/gudhi-2.3.0+dfsg/doc/Subsampling/Intro_subsampling.h... Parsing file /build/gudhi-2.3.0+dfsg/doc/Subsampling/Intro_subsampling.h... Preprocessing /build/gudhi-2.3.0+dfsg/doc/Tangential_complex/Intro_tangential_complex.h... Parsing file /build/gudhi-2.3.0+dfsg/doc/Tangential_complex/Intro_tangential_complex.h... Preprocessing /build/gudhi-2.3.0+dfsg/doc/Witness_complex/Witness_complex_doc.h... Parsing file /build/gudhi-2.3.0+dfsg/doc/Witness_complex/Witness_complex_doc.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Active_witness/Active_witness.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Active_witness/Active_witness.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Active_witness/Active_witness_iterator.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Active_witness/Active_witness_iterator.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/allocator.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/allocator.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Alpha_complex.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Alpha_complex.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Bitmap_cubical_complex/counter.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Bitmap_cubical_complex/counter.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Bitmap_cubical_complex.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Bitmap_cubical_complex.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Bitmap_cubical_complex_base.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Bitmap_cubical_complex_base.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Bitmap_cubical_complex_periodic_boundary_conditions_base.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Bitmap_cubical_complex_periodic_boundary_conditions_base.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Bottleneck.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Bottleneck.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Cech_complex.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Cech_complex.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Cech_complex_blocker.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Cech_complex_blocker.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/choose_n_farthest_points.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/choose_n_farthest_points.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Clock.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Clock.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/common_persistence_representations.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/common_persistence_representations.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/console_color.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/console_color.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Contraction/CGAL_queue/Modifiable_priority_queue.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Contraction/CGAL_queue/Modifiable_priority_queue.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Contraction/Edge_profile.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Contraction/Edge_profile.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Contraction/policies/Contraction_visitor.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Contraction/policies/Contraction_visitor.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Contraction/policies/Cost_policy.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Contraction/policies/Cost_policy.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Contraction/policies/Dummy_valid_contraction.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Contraction/policies/Dummy_valid_contraction.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Contraction/policies/Edge_length_cost.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Contraction/policies/Edge_length_cost.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Contraction/policies/First_vertex_placement.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Contraction/policies/First_vertex_placement.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Contraction/policies/Link_condition_valid_contraction.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Contraction/policies/Link_condition_valid_contraction.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Contraction/policies/Middle_placement.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Contraction/policies/Middle_placement.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Contraction/policies/Placement_policy.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Contraction/policies/Placement_policy.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Contraction/policies/Valid_contraction_policy.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Contraction/policies/Valid_contraction_policy.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Debug_utils.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Debug_utils.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/distance_functions.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/distance_functions.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Edge_contraction.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Edge_contraction.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Euclidean_strong_witness_complex.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Euclidean_strong_witness_complex.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Euclidean_witness_complex.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Euclidean_witness_complex.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/GIC.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/GIC.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Graph_matching.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Graph_matching.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/graph_simplicial_complex.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/graph_simplicial_complex.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Hasse_complex.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Hasse_complex.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Internal_point.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Internal_point.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Kd_tree_search.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Kd_tree_search.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Miniball.hpp... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Miniball.hpp... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Neighbors_finder.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Neighbors_finder.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Null_output_iterator.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Null_output_iterator.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Off_reader.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Off_reader.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Persistence_graph.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Persistence_graph.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Persistence_heat_maps.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Persistence_heat_maps.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Persistence_intervals.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Persistence_intervals.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Persistence_intervals_with_distances.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Persistence_intervals_with_distances.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Persistence_landscape.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Persistence_landscape.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Persistence_landscape_on_grid.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Persistence_landscape_on_grid.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Persistence_vectors.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Persistence_vectors.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Persistent_cohomology/Field_Zp.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Persistent_cohomology/Field_Zp.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Persistent_cohomology/Multi_field.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Persistent_cohomology/Multi_field.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Persistent_cohomology/Persistent_cohomology_column.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Persistent_cohomology/Persistent_cohomology_column.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Persistent_cohomology.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Persistent_cohomology.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/pick_n_random_points.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/pick_n_random_points.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Point.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Point.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Points_3D_off_io.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Points_3D_off_io.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Points_off_io.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Points_off_io.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/PSSK.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/PSSK.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/random_point_generators.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/random_point_generators.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/read_persistence_from_file.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/read_persistence_from_file.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/reader_utils.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/reader_utils.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Rips_complex.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Rips_complex.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Simple_object_pool.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Simple_object_pool.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Simplex_tree/indexing_tag.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Simplex_tree/indexing_tag.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Simplex_tree/Simplex_tree_iterators.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Simplex_tree/Simplex_tree_iterators.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Simplex_tree/Simplex_tree_node_explicit_storage.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Simplex_tree/Simplex_tree_node_explicit_storage.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Simplex_tree/Simplex_tree_siblings.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Simplex_tree/Simplex_tree_siblings.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Simplex_tree.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Simplex_tree.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker/internal/Top_faces.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker/internal/Top_faces.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker/internal/Trie.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker/internal/Trie.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker/iterators/Skeleton_blockers_blockers_iterators.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker/iterators/Skeleton_blockers_blockers_iterators.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker/iterators/Skeleton_blockers_edges_iterators.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker/iterators/Skeleton_blockers_edges_iterators.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker/iterators/Skeleton_blockers_iterators.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker/iterators/Skeleton_blockers_iterators.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker/iterators/Skeleton_blockers_simplices_iterators.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker/iterators/Skeleton_blockers_simplices_iterators.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker/iterators/Skeleton_blockers_triangles_iterators.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker/iterators/Skeleton_blockers_triangles_iterators.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker/iterators/Skeleton_blockers_vertices_iterators.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker/iterators/Skeleton_blockers_vertices_iterators.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker/Skeleton_blocker_complex_visitor.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker/Skeleton_blocker_complex_visitor.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker/Skeleton_blocker_link_superior.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker/Skeleton_blocker_link_superior.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker/Skeleton_blocker_off_io.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker/Skeleton_blocker_off_io.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker/Skeleton_blocker_simple_geometric_traits.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker/Skeleton_blocker_simple_geometric_traits.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker/Skeleton_blocker_simple_traits.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker/Skeleton_blocker_simple_traits.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker/Skeleton_blocker_simplex.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker/Skeleton_blocker_simplex.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker/Skeleton_blocker_sub_complex.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker/Skeleton_blocker_sub_complex.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_complex.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_contractor.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_contractor.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_geometric_complex.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_geometric_complex.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_link_complex.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_link_complex.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_simplifiable_complex.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker_simplifiable_complex.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Sparse_rips_complex.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Sparse_rips_complex.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/sparsify_point_set.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/sparsify_point_set.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Strong_witness_complex.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Strong_witness_complex.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Tangential_complex/config.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Tangential_complex/config.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Tangential_complex/Simplicial_complex.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Tangential_complex/Simplicial_complex.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Tangential_complex/utilities.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Tangential_complex/utilities.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Tangential_complex.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Tangential_complex.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Unitary_tests_utils.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Unitary_tests_utils.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Witness_complex/all_faces_in.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Witness_complex/all_faces_in.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/Witness_complex.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/Witness_complex.h... Preprocessing /build/gudhi-2.3.0+dfsg/include/gudhi/writing_persistence_to_file.h... Parsing file /build/gudhi-2.3.0+dfsg/include/gudhi/writing_persistence_to_file.h... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Alpha_complex/alpha_complex_3d_helper.h... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Alpha_complex/alpha_complex_3d_helper.h... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Alpha_complex/alpha_complex_3d_persistence.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Alpha_complex/alpha_complex_3d_persistence.cpp... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Alpha_complex/alpha_complex_persistence.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Alpha_complex/alpha_complex_persistence.cpp... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Alpha_complex/exact_alpha_complex_3d_persistence.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Alpha_complex/exact_alpha_complex_3d_persistence.cpp... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Alpha_complex/periodic_alpha_complex_3d_persistence.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Alpha_complex/periodic_alpha_complex_3d_persistence.cpp... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Alpha_complex/weighted_alpha_complex_3d_persistence.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Alpha_complex/weighted_alpha_complex_3d_persistence.cpp... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Alpha_complex/weighted_periodic_alpha_complex_3d_persistence.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Alpha_complex/weighted_periodic_alpha_complex_3d_persistence.cpp... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Bitmap_cubical_complex/cubical_complex_persistence.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Bitmap_cubical_complex/cubical_complex_persistence.cpp... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Bitmap_cubical_complex/periodic_cubical_complex_persistence.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Bitmap_cubical_complex/periodic_cubical_complex_persistence.cpp... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Bottleneck_distance/bottleneck_distance.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Bottleneck_distance/bottleneck_distance.cpp... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Cech_complex/cech_persistence.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Cech_complex/cech_persistence.cpp... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/common/off_file_from_shape_generator.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/common/off_file_from_shape_generator.cpp... Reading /build/gudhi-2.3.0+dfsg/utilities/Nerve_GIC/KeplerMapperVisuFromTxtFile.py... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Nerve_GIC/KeplerMapperVisuFromTxtFile.py... Reading /build/gudhi-2.3.0+dfsg/utilities/Nerve_GIC/km.py... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Nerve_GIC/km.py... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Nerve_GIC/Nerve.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Nerve_GIC/Nerve.cpp... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Nerve_GIC/VoronoiGIC.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Nerve_GIC/VoronoiGIC.cpp... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps/average_persistence_heat_maps.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps/average_persistence_heat_maps.cpp... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps/compute_distance_of_persistence_heat_maps.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps/compute_distance_of_persistence_heat_maps.cpp... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps/compute_scalar_product_of_persistence_heat_maps.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps/compute_scalar_product_of_persistence_heat_maps.cpp... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps/create_p_h_m_weighted_by_arctan_of_their_persistence.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps/create_p_h_m_weighted_by_arctan_of_their_persistence.cpp... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps/create_p_h_m_weighted_by_distance_from_diagonal.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps/create_p_h_m_weighted_by_distance_from_diagonal.cpp... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps/create_p_h_m_weighted_by_squared_diag_distance.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps/create_p_h_m_weighted_by_squared_diag_distance.cpp... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps/create_persistence_heat_maps.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps/create_persistence_heat_maps.cpp... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps/create_pssk.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps/create_pssk.cpp... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps/plot_persistence_heat_map.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps/plot_persistence_heat_map.cpp... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_intervals/compute_birth_death_range_in_persistence_diagram.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_intervals/compute_birth_death_range_in_persistence_diagram.cpp... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_intervals/compute_bottleneck_distance.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_intervals/compute_bottleneck_distance.cpp... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_intervals/compute_number_of_dominant_intervals.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_intervals/compute_number_of_dominant_intervals.cpp... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_intervals/plot_histogram_of_intervals_lengths.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_intervals/plot_histogram_of_intervals_lengths.cpp... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_intervals/plot_persistence_Betti_numbers.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_intervals/plot_persistence_Betti_numbers.cpp... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_intervals/plot_persistence_intervals.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_intervals/plot_persistence_intervals.cpp... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes/average_landscapes.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes/average_landscapes.cpp... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes/compute_distance_of_landscapes.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes/compute_distance_of_landscapes.cpp... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes/compute_scalar_product_of_landscapes.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes/compute_scalar_product_of_landscapes.cpp... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes/create_landscapes.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes/create_landscapes.cpp... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes/plot_landscapes.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes/plot_landscapes.cpp... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes_on_grid/average_landscapes_on_grid.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes_on_grid/average_landscapes_on_grid.cpp... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes_on_grid/compute_distance_of_landscapes_on_grid.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes_on_grid/compute_distance_of_landscapes_on_grid.cpp... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes_on_grid/compute_scalar_product_of_landscapes_on_grid.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes_on_grid/compute_scalar_product_of_landscapes_on_grid.cpp... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes_on_grid/create_landscapes_on_grid.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes_on_grid/create_landscapes_on_grid.cpp... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes_on_grid/plot_landscapes_on_grid.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes_on_grid/plot_landscapes_on_grid.cpp... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_vectors/average_persistence_vectors.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_vectors/average_persistence_vectors.cpp... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_vectors/compute_distance_of_persistence_vectors.cpp... Par/build/gudhi-2.3.0+dfsg/doc/common/examples.h:3: warning: the name `Examples' supplied as the second argument in the \file statement is not an input file /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/DMHXEJ42XS/moc_MainWindow.cpp:158: warning: documented symbol `void MainWindow::qt_static_metacall' was not declared or defined. /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/DMHXEJ42XS/moc_MainWindow.cpp:202: warning: documented symbol `QT_INIT_METAOBJECT const QMetaObject MainWindow::staticMetaObject' was not declared or defined. /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/DMHXEJ42XS/moc_MainWindow.cpp:208: warning: documented symbol `const QMetaObject * MainWindow::metaObject' was not declared or defined. /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/DMHXEJ42XS/moc_MainWindow.cpp:213: warning: documented symbol `void * MainWindow::qt_metacast' was not declared or defined. /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/DMHXEJ42XS/moc_MainWindow.cpp:223: warning: documented symbol `int MainWindow::qt_metacall' was not declared or defined. /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/DMHXEJ42XS/moc_MainWindow.cpp:241: warning: documented symbol `void MainWindow::sceneChanged' was not declared or defined. /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/DMHXEJ42XS/moc_Menu_edge_contraction.cpp:86: warning: documented symbol `void Menu_edge_contraction::qt_static_metacall' was not declared or defined. /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/DMHXEJ42XS/moc_Menu_edge_contraction.cpp:111: warning: documented symbol `QT_INIT_METAOBJECT const QMetaObject Menu_edge_contraction::staticMetaObject' was not declared or defined. /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/DMHXEJ42XS/moc_Menu_edge_contraction.cpp:117: warning: documented symbol `const QMetaObject * Menu_edge_contraction::metaObject' was not declared or defined. /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/DMHXEJ42XS/moc_Menu_edge_contraction.cpp:122: warning: documented symbol `void * Menu_edge_contraction::qt_metacast' was not declared or defined. /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/DMHXEJ42XS/moc_Menu_edge_contraction.cpp:132: warning: documented symbol `int Menu_edge_contraction::qt_metacall' was not declared or defined. /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/DMHXEJ42XS/moc_Menu_edge_contraction.cpp:150: warning: no matching class member found for void Menu_edge_contraction::contract_edges(unsigned _t1) /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/DMHXEJ42XS/moc_Menu_k_nearest_neighbors.cpp:82: warning: documented symbol `void Menu_k_nearest_neighbors::qt_static_metacall' was not declared or defined. /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/DMHXEJ42XS/moc_Menu_k_nearest_neighbors.cpp:106: warning: documented symbol `QT_INIT_METAOBJECT const QMetaObject Menu_k_nearest_neighbors::staticMetaObject' was not declared or defined. /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/DMHXEJ42XS/moc_Menu_k_nearest_neighbors.cpp:112: warning: documented symbol `const QMetaObject * Menu_k_nearest_neighbors::metaObject' was not declared or defined. /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/DMHXEJ42XS/moc_Menu_k_nearest_neighbors.cpp:117: warning: documented symbol `void * Menu_k_nearest_neighbors::qt_metacast' was not declared or defined. /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/DMHXEJ42XS/moc_Menu_k_nearest_neighbors.cpp:127: warning: documented symbol `int Menu_k_nearest_neighbors::qt_metacall' was not declared or defined. /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/DMHXEJ42XS/moc_Menu_k_nearest_neighbors.cpp:145: warning: documented symbol `void Menu_k_nearest_neighbors::compute_k_nearest_neighbors' was not declared or defined. /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/DMHXEJ42XS/moc_Menu_persistence.cpp:81: warning: documented symbol `void Menu_persistence::qt_static_metacall' was not declared or defined. /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/DMHXEJ42XS/moc_Menu_persistence.cpp:104: warning: documented symbol `QT_INIT_METAOBJECT const QMetaObject Menu_persistence::staticMetaObject' was not declared or defined. /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/DMHXEJ42XS/moc_Menu_persistence.cpp:110: warning: documented symbol `const QMetaObject * Menu_persistence::metaObject' was not declared or defined. /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/DMHXEJ42XS/moc_Menu_persistence.cpp:115: warning: documented symbol `void * Menu_persistence::qt_metacast' was not declared or defined. /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/DMHXEJ42XS/moc_Menu_persistence.cpp:125: warning: documented symbol `int Menu_persistence::qt_metacall' was not declared or defined. /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/DMHXEJ42XS/moc_Menu_persistence.cpp:143: warning: documented symbol `void Menu_persistence::compute_persistence' was not declared or defined. /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/DMHXEJ42XS/moc_Menu_uniform_neighbors.cpp:81: warning: documented symbol `void Menu_uniform_neighbors::qt_static_metacall' was not declared or defined. /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/DMHXEJ42XS/moc_Menu_uniform_neighbors.cpp:105: warning: documented symbol `QT_INIT_METAOBJECT const QMetaObject Menu_uniform_neighbors::staticMetaObject' was not declared or defined. /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/DMHXEJ42XS/moc_Menu_uniform_neighbors.cpp:111: warning: documented symbol `const QMetaObject * Menu_uniform_neighbors::metaObject' was not declared or defined. /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/DMHXEJ42XS/moc_Menu_uniform_neighbors.cpp:116: warning: documented symbol `void * Menu_uniform_neighbors::qt_metacast' was not declared or defined. /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/DMHXEJ42XS/moc_Menu_uniform_neighbors.cpp:126: warning: documented symbol `int Menu_uniform_neighbors::qt_metacall' was not declared or defined. /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/DMHXEJ42XS/moc_Menu_uniform_neighbors.cpp:144: warning: documented symbol `void Menu_uniform_neighbors::compute_uniform_neighbors' was not declared or defined. /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/OTUN7GXZT4/moc_Viewer.cpp:67: warning: documented symbol `void Viewer::qt_static_metacall' was not declared or defined. /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/OTUN7GXZT4/moc_Viewer.cpp:88: warning: documented symbol `QT_INIT_METAOBJECT const QMetaObject Viewer::staticMetaObject' was not declared or defined. /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/OTUN7GXZT4/moc_Viewer.cpp:94: warning: documented symbol `const QMetaObject * Viewer::metaObject' was not declared or defined. /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/OTUN7GXZT4/moc_Viewer.cpp:99: warning: documented symbol `void * Viewer::qt_metacast' was not declared or defined. /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/OTUN7GXZT4/moc_Viewer.cpp:107: warning: documented symbol `int Viewer::qt_metacall' was not declared or defined. /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/OTUN7GXZT4/moc_Viewer.cpp:125: warning: documented symbol `void Viewer::click' was not declared or defined. /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/OTUN7GXZT4/moc_Viewer_instructor.cpp:79: warning: documented symbol `void Viewer_instructor::qt_static_metacall' was not declared or defined. /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/OTUN7GXZT4/moc_Viewer_instructor.cpp:96: warning: documented symbol `QT_INIT_METAOBJECT const QMetaObject Viewer_instructor::staticMetaObject' was not declared or defined. /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/OTUN7GXZT4/moc_Viewer_instructor.cpp:102: warning: documented symbol `const QMetaObject * Viewer_instructor::metaObject' was not declared or defined. /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/OTUN7GXZT4/moc_Viewer_instructor.cpp:107: warning: documented symbol `void * Viewer_instructor::qt_metacast' was not declared or defined. /build/gudhi-2.3.0+dfsg/build/GudhUI/GudhUI_autogen/OTUN7GXZT4/moc_Viewer_instructor.cpp:115: warning: documented symbol `int Viewer_instructor::qt_metacall' was not declared or defined. error opening bib39287.bbl: No such file or directory bibtex command failed: No such file or directory error: Problems running bibtex. Verify that the command 'perl --version' works from the command line. Exit code: 2 sing file /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_vectors/compute_distance_of_persistence_vectors.cpp... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_vectors/compute_scalar_product_of_persistence_vectors.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_vectors/compute_scalar_product_of_persistence_vectors.cpp... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_vectors/create_persistence_vectors.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_vectors/create_persistence_vectors.cpp... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_vectors/plot_persistence_vectors.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_vectors/plot_persistence_vectors.cpp... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Rips_complex/rips_correlation_matrix_persistence.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Rips_complex/rips_correlation_matrix_persistence.cpp... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Rips_complex/rips_distance_matrix_persistence.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Rips_complex/rips_distance_matrix_persistence.cpp... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Rips_complex/rips_persistence.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Rips_complex/rips_persistence.cpp... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Rips_complex/sparse_rips_persistence.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Rips_complex/sparse_rips_persistence.cpp... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Witness_complex/strong_witness_persistence.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Witness_complex/strong_witness_persistence.cpp... Preprocessing /build/gudhi-2.3.0+dfsg/utilities/Witness_complex/weak_witness_persistence.cpp... Parsing file /build/gudhi-2.3.0+dfsg/utilities/Witness_complex/weak_witness_persistence.cpp... Building group list... Building directory list... Building namespace list... Building file list... Building class list... Associating documentation with classes... Computing nesting relations for classes... Building example list... Searching for enumerations... Searching for documented typedefs... Searching for members imported via using declarations... Searching for included using directives... Searching for documented variables... Building interface member list... Building member list... Searching for friends... Searching for documented defines... Computing class inheritance relations... Computing class usage relations... Flushing cached template relations that have become invalid... Computing class relations... Add enum values to enums... Searching for member function documentation... Creating members for template instances... Building page list... Search for main page... Computing page relations... Determining the scope of groups... Sorting lists... Freeing entry tree Determining which enums are documented Computing member relations... Building full member lists recursively... Adding members to member groups. Computing member references... Inheriting documentation... Generating disk names... Adding source references... Adding xrefitems... Sorting member lists... Computing dependencies between directories... Generating citations page... Counting data structures... Resolving user defined references... Finding anchors and sections in the documentation... Transferring function references... Combining using relations... Adding members to index pages... Generating style sheet... Generating search indices... Generating example documentation... Generating docs for example Alpha_complex/alpha_complex_3d_persistence.cpp... Generating docs for example Alpha_complex/Alpha_complex_from_off.cpp... Generating docs for example Alpha_complex/Alpha_complex_from_points.cpp... Generating docs for example Alpha_complex/alpha_complex_persistence.cpp... Generating docs for example Alpha_complex/exact_alpha_complex_3d_persistence.cpp... Generating docs for example Alpha_complex/periodic_alpha_complex_3d_persistence.cpp... Generating docs for example Alpha_complex/weighted_alpha_complex_3d_persistence.cpp... Generating docs for example Alpha_complex/weighted_periodic_alpha_complex_3d_persistence.cpp... Generating docs for example Bitmap_cubical_complex/cubical_complex_persistence.cpp... Generating docs for example Bitmap_cubical_complex/periodic_cubical_complex_persistence.cpp... Generating docs for example Bitmap_cubical_complex/Random_bitmap_cubical_complex.cpp... Generating docs for example Bottleneck_distance/alpha_rips_persistence_bottleneck_distance.cpp... Generating docs for example Bottleneck_distance/bottleneck_basic_example.cpp... Generating docs for example Bottleneck_distance/bottleneck_distance.cpp... Generating docs for example common/example_CGAL_3D_points_off_reader.cpp... Generating docs for example common/example_CGAL_points_off_reader.cpp... Generating docs for example common/example_vector_double_points_off_reader.cpp... Generating docs for example common/off_file_from_shape_generator.cpp... Generating docs for example Contraction/Garland_heckbert.cpp... Generating docs for example Contraction/Rips_contraction.cpp... Generating docs for example Nerve_GIC/CoordGIC.cpp... Generating docs for example Nerve_GIC/FuncGIC.cpp... Generating docs for example Nerve_GIC/Nerve.cpp... Generating docs for example Nerve_GIC/VoronoiGIC.cpp... Generating docs for example Persistence_representations/persistence_heat_maps.cpp... Generating docs for example Persistence_representations/persistence_heat_maps/average_persistence_heat_maps.cpp... Generating docs for example Persistence_representations/persistence_heat_maps/compute_distance_of_persistence_heat_maps.cpp... Generating docs for example Persistence_representations/persistence_heat_maps/compute_scalar_product_of_persistence_heat_maps.cpp... Generating docs for example Persistence_representations/persistence_heat_maps/create_p_h_m_weighted_by_arctan_of_their_persistence.cpp... Generating docs for example Persistence_representations/persistence_heat_maps/create_p_h_m_weighted_by_distance_from_diagonal.cpp... Generating docs for example Persistence_representations/persistence_heat_maps/create_p_h_m_weighted_by_squared_diag_distance.cpp... Generating docs for example Persistence_representations/persistence_heat_maps/create_persistence_heat_maps.cpp... Generating docs for example Persistence_representations/persistence_heat_maps/create_pssk.cpp... Generating docs for example Persistence_representations/persistence_heat_maps/plot_persistence_heat_map.cpp... Generating docs for example Persistence_representations/persistence_intervals.cpp... Generating docs for example Persistence_representations/persistence_intervals/compute_birth_death_range_in_persistence_diagram.cpp... Generating docs for example Persistence_representations/persistence_intervals/compute_bottleneck_distance.cpp... Generating docs for example Persistence_representations/persistence_intervals/compute_number_of_dominant_intervals.cpp... Generating docs for example Persistence_representations/persistence_intervals/plot_histogram_of_intervals_lengths.cpp... Generating docs for example Persistence_representations/persistence_intervals/plot_persistence_Betti_numbers.cpp... Generating docs for example Persistence_representations/persistence_intervals/plot_persistence_intervals.cpp... Generating docs for example Persistence_representations/persistence_landscape.cpp... Generating docs for example Persistence_representations/persistence_landscape_on_grid.cpp... Generating docs for example Persistence_representations/persistence_landscapes/average_landscapes.cpp... Generating docs for example Persistence_representations/persistence_landscapes/compute_distance_of_landscapes.cpp... Generating docs for example Persistence_representations/persistence_landscapes/compute_scalar_product_of_landscapes.cpp... Generating docs for example Persistence_representations/persistence_landscapes/create_landscapes.cpp... Generating docs for example Persistence_representations/persistence_landscapes/plot_landscapes.cpp... Generating docs for example Persistence_representations/persistence_landscapes_on_grid/average_landscapes_on_grid.cpp... Generating docs for example Persistence_representations/persistence_landscapes_on_grid/compute_distance_of_landscapes_on_grid.cpp... Generating docs for example Persistence_representations/persistence_landscapes_on_grid/compute_scalar_product_of_landscapes_on_grid.cpp... Generating docs for example Persistence_representations/persistence_landscapes_on_grid/create_landscapes_on_grid.cpp... Generating docs for example Persistence_representations/persistence_landscapes_on_grid/plot_landscapes_on_grid.cpp... Generating docs for example Persistence_representations/persistence_vectors.cpp... Generating docs for example Persistence_representations/persistence_vectors/average_persistence_vectors.cpp... Generating docs for example Persistence_representations/persistence_vectors/compute_distance_of_persistence_vectors.cpp... Generating docs for example Persistence_representations/persistence_vectors/compute_scalar_product_of_persistence_vectors.cpp... Generating docs for example Persistence_representations/persistence_vectors/create_persistence_vectors.cpp... Generating docs for example Persistence_representations/persistence_vectors/plot_persistence_vectors.cpp... Generating docs for example Persistent_cohomology/custom_persistence_sort.cpp... Generating docs for example Persistent_cohomology/persistence_from_file.cpp... Generating docs for example Persistent_cohomology/persistence_from_simple_simplex_tree.cpp... Generating docs for example Persistent_cohomology/plain_homology.cpp... Generating docs for example Persistent_cohomology/rips_multifield_persistence.cpp... Generating docs for example Persistent_cohomology/rips_persistence_step_by_step.cpp... Generating docs for example Persistent_cohomology/rips_persistence_via_boundary_matrix.cpp... Generating docs for example Rips_complex/example_one_skeleton_rips_from_distance_matrix.cpp... Generating docs for example Rips_complex/example_one_skeleton_rips_from_points.cpp... Generating docs for example Rips_complex/example_rips_complex_from_csv_distance_matrix_file.cpp... Generating docs for example Rips_complex/example_rips_complex_from_off_file.cpp... Generating docs for example Rips_complex/rips_distance_matrix_persistence.cpp... Generating docs for example Rips_complex/rips_persistence.cpp... Generating docs for example Simplex_tree/cech_complex_cgal_mini_sphere_3d.cpp... Generating docs for example Simplex_tree/example_alpha_shapes_3_simplex_tree_from_off_file.cpp... Generating docs for example Simplex_tree/graph_expansion_with_blocker.cpp... Generating docs for example Simplex_tree/mini_simplex_tree.cpp... Generating docs for example Simplex_tree/simple_simplex_tree.cpp... Generating docs for example Simplex_tree/simplex_tree_from_cliques_of_graph.cpp... Generating docs for example Skeleton_blocker/Skeleton_blocker_from_simplices.cpp... Generating docs for example Skeleton_blocker/Skeleton_blocker_iteration.cpp... Generating docs for example Skeleton_blocker/Skeleton_blocker_link.cpp... Generating docs for example Spatial_searching/example_spatial_searching.cpp... Generating docs for example Subsampling/example_choose_n_farthest_points.cpp... Generating docs for example Subsampling/example_custom_kernel.cpp... Generating docs for example Subsampling/example_pick_n_random_points.cpp... Generating docs for example Subsampling/example_sparsify_point_set.cpp... Generating docs for example Tangential_complex/example_basic.cpp... Generating docs for example Tangential_complex/example_with_perturb.cpp... Generating docs for example Witness_complex/example_nearest_landmark_table.cpp... Generating docs for example Witness_complex/example_strong_witness_complex_off.cpp... Generating docs for example Witness_complex/example_witness_complex_off.cpp... Generating docs for example Witness_complex/example_witness_complex_sphere.cpp... Generating docs for example W/build/gudhi-2.3.0+dfsg/include/gudhi/GIC.h:416: warning: \cite command to 'Carriere17c' does not have an associated number itness_complex/strong_witness_persistence.cpp... Generating docs for example Witness_complex/weak_witness_persistence.cpp... Generating file sources... Generating code for file build/GudhUI/GudhUI_autogen/include/ui_KNearestNeighborsMenu.h... Generating code for file build/GudhUI/GudhUI_autogen/include/ui_main_window.h... Generating code for file build/GudhUI/GudhUI_autogen/include/ui_MenuEdgeContraction.h... Generating code for file build/GudhUI/GudhUI_autogen/include/ui_PersistenceMenu.h... Generating code for file build/GudhUI/GudhUI_autogen/include/ui_UniformNeighborsMenu.h... Generating code for file build/GudhUI/GudhUI_autogen/moc_predefs.h... Generating code for file concept/Alpha_complex/SimplicialComplexForAlpha.h... Generating code for file concept/Bottleneck_distance/Persistence_diagram.h... Generating code for file concept/Cech_complex/SimplicialComplexForCech.h... Generating code for file concept/Persistence_representations/Real_valued_topological_data.h... Generating code for file concept/Persistence_representations/Topological_data_with_averages.h... Generating code for file concept/Persistence_representations/Topological_data_with_distances.h... Generating code for file concept/Persistence_representations/Topological_data_with_scalar_product.h... Generating code for file concept/Persistence_representations/Vectorized_topological_data.h... Generating code for file concept/Persistent_cohomology/CoefficientField.h... Generating code for file concept/Persistent_cohomology/FilteredComplex.h... Generating code for file concept/Persistent_cohomology/PersistentHomology.h... Generating code for file concept/Rips_complex/SimplicialComplexForRips.h... Generating code for file concept/Simplex_tree/FiltrationValue.h... Generating code for file concept/Simplex_tree/IndexingTag.h... Generating code for file concept/Simplex_tree/SimplexKey.h... Generating code for file concept/Simplex_tree/SimplexTreeOptions.h... Generating code for file concept/Simplex_tree/VertexHandle.h... Generating code for file concept/Skeleton_blocker/SkeletonBlockerDS.h... Generating code for file concept/Skeleton_blocker/SkeletonBlockerGeometricDS.h... Generating code for file concept/Witness_complex/SimplicialComplexForWitness.h... Generating code for file cython/include/Alpha_complex_interface.h... Generating code for file cython/include/Bottleneck_distance_interface.h... Generating code for file cython/include/Cubical_complex_interface.h... Generating code for file cython/include/Euclidean_strong_witness_complex_interface.h... Generating code for file cython/include/Euclidean_witness_complex_interface.h... Generating code for file cython/include/Nerve_gic_interface.h... Generating code for file cython/include/Off_reader_interface.h... Generating code for file cython/include/Persistent_cohomology_interface.h... Generating code for file cython/include/Reader_utils_interface.h... Generating code for file cython/include/Rips_complex_interface.h... Generating code for file cython/include/Simplex_tree_interface.h... Generating code for file cython/include/Strong_witness_complex_interface.h... Generating code for file cython/include/Subsampling_interface.h... Generating code for file cython/include/Tangential_complex_interface.h... Generating code for file cython/include/Witness_complex_interface.h... Generating code for file doc/Alpha_complex/Intro_alpha_complex.h... Generating code for file doc/Bitmap_cubical_complex/Gudhi_Cubical_Complex_doc.h... Generating code for file doc/Bottleneck_distance/Intro_bottleneck_distance.h... Generating code for file doc/Cech_complex/Intro_cech_complex.h... Generating code for file doc/common/examples.h... Generating code for file doc/common/file_formats.h... Generating code for file doc/common/installation.h... Generating code for file doc/common/main_page.h... Generating code for file doc/Nerve_GIC/Intro_graph_induced_complex.h... Generating code for file doc/Persistence_representations/Persistence_representations_doc.h... Generating code for file doc/Persistent_cohomology/Intro_persistent_cohomology.h... Genera/build/gudhi-2.3.0+dfsg/include/gudhi/GIC.h:207: warning: \cite command to 'Carriere17c' does not have an associated number /build/gudhi-2.3.0+dfsg/include/gudhi/GIC.h:416: warning: \cite command to 'Carriere17c' does not have an associated number /build/gudhi-2.3.0+dfsg/include/gudhi/GIC.h:526: warning: \cite command to 'Carriere17c' does not have an associated number ting code for file doc/Rips_complex/Intro_rips_complex.h... Generating code for file doc/Simplex_tree/Intro_simplex_tree.h... Generating code for file doc/Spatial_searching/Intro_spatial_searching.h... Generating code for file doc/Subsampling/Intro_subsampling.h... Generating code for file doc/Tangential_complex/Intro_tangential_complex.h... Generating code for file doc/Witness_complex/Witness_complex_doc.h... Generating code for file include/gudhi/Active_witness/Active_witness.h... Generating code for file include/gudhi/Active_witness/Active_witness_iterator.h... Generating code for file include/gudhi/allocator.h... Generating code for file include/gudhi/Alpha_complex.h... Generating code for file include/gudhi/Bitmap_cubical_complex.h... Generating code for file include/gudhi/Bitmap_cubical_complex/counter.h... Generating code for file include/gudhi/Bitmap_cubical_complex_base.h... Generating code for file include/gudhi/Bitmap_cubical_complex_periodic_boundary_conditions_base.h... Generating code for file include/gudhi/Bottleneck.h... Generating code for file include/gudhi/Cech_complex.h... Generating code for file include/gudhi/Cech_complex_blocker.h... Generating code for file include/gudhi/choose_n_farthest_points.h... Generating code for file include/gudhi/Clock.h... Generating code for file include/gudhi/common_persistence_representations.h... Generating code for file include/gudhi/console_color.h... Generating code for file include/gudhi/Contraction/CGAL_queue/Modifiable_priority_queue.h... Generating code for file include/gudhi/Contraction/Edge_profile.h... Generating code for file include/gudhi/Contraction/policies/Contraction_visitor.h... Generating code for file include/gudhi/Contraction/policies/Cost_policy.h... Generating code for file include/gudhi/Contraction/policies/Dummy_valid_contraction.h... Generating code for file include/gudhi/Contraction/policies/Edge_length_cost.h... Generating code for file include/gudhi/Contraction/policies/First_vertex_placement.h... Generating code for file include/gudhi/Contraction/policies/Link_condition_valid_contraction.h... Generating code for file include/gudhi/Contraction/policies/Middle_placement.h... Generating code for file include/gudhi/Contraction/policies/Placement_policy.h... Generating code for file include/gudhi/Contraction/policies/Valid_contraction_policy.h... Generating code for file include/gudhi/Debug_utils.h... Generating code for file include/gudhi/distance_functions.h... Generating code for file include/gudhi/Edge_contraction.h... Generating code for file include/gudhi/Euclidean_strong_witness_complex.h... Generating code for file include/gudhi/Euclidean_witness_complex.h... Generating code for file include/gudhi/GIC.h... Generating code for file include/gudhi/Graph_matching.h... Generating code for file include/gudhi/graph_simplicial_complex.h... Generating code for file include/gudhi/Hasse_complex.h... Generating code for file include/gudhi/Internal_point.h... Generating code for file include/gudhi/Kd_tree_search.h... Generating code for file include/gudhi/Miniball.hpp... Generating code for file include/gudhi/Neighbors_finder.h... Generating code for file include/gudhi/Null_output_iterator.h... Generating code for file include/gudhi/Off_reader.h... Generating code for file include/gudhi/Persistence_graph.h... Generating code for file include/gudhi/Persistence_heat_maps.h... Generating code for file include/gudhi/Persistence_intervals.h... Generating code for file include/gudhi/Persistence_intervals_with_distances.h... Generating code for file include/gudhi/Persistence_landscape.h... Generating code for file include/gudhi/Persistence_landscape_on_grid.h... Generating code for file include/gudhi/Persistence_vectors.h... Generating code for file include/gudhi/Persistent_cohomology.h... Generating code for file include/gudhi/Persistent_cohomology/Field_Zp.h... Generating code for file include/gudhi/Persistent_cohomology/Multi_field.h... Generating code for file include/gudhi/Persistent_cohomology/Persistent_cohomology_column.h... Generating code for fi/build/gudhi-2.3.0+dfsg/doc/common/installation.h:74: warning: \cite command to 'cgal:eb-15b' does not have an associated number /build/gudhi-2.3.0+dfsg/doc/Alpha_complex/Intro_alpha_complex.h:53: warning: \cite command to 'cgal:hdj-t-15b' does not have an associated number /build/gudhi-2.3.0+dfsg/doc/Alpha_complex/Intro_alpha_complex.h:54: warning: \cite command to 'cgal:eb-15b' does not have an associated number /build/gudhi-2.3.0+dfsg/doc/Alpha_complex/Intro_alpha_complex.h:58: warning: \cite command to 'cgal:s-gkd-15b' does not have an associated number /build/gudhi-2.3.0+dfsg/doc/Bitmap_cubical_complex/Gudhi_Cubical_Complex_doc.h:63: warning: \cite command to 'kaczynski2004computational' does not have an associated number /build/gudhi-2.3.0+dfsg/doc/Bitmap_cubical_complex/Gudhi_Cubical_Complex_doc.h:64: warning: \cite command to 'peikert2012topological' does not have an associated number /build/gudhi-2.3.0+dfsg/include/gudhi/Bottleneck.h:111: warning: The following parameters of Gudhi::persistence_diagram::bottleneck_distance(const Persistence_diagram1 &diag1, const Persistence_diagram2 &diag2, double e=(std::numeric_limits< double >::min)()) are not documented: parameter 'diag1' parameter 'diag2' /build/gudhi-2.3.0+dfsg/doc/Nerve_GIC/Intro_graph_induced_complex.h:99: warning: \cite command to 'Dey13' does not have an associated number /build/gudhi-2.3.0+dfsg/doc/Nerve_GIC/Intro_graph_induced_complex.h:133: warning: \cite command to 'Carriere16' does not have an associated number /build/gudhi-2.3.0+dfsg/doc/Nerve_GIC/Intro_graph_induced_complex.h:138: warning: \cite command to 'Carriere17c' does not have an associated number /build/gudhi-2.3.0+dfsg/doc/Persistence_representations/Persistence_representations_doc.h:103: warning: \cite command to 'bubenik_landscapes_2015' does not have an associated number /build/gudhi-2.3.0+dfsg/doc/Persistence_representations/Persistence_representations_doc.h:104: warning: \cite command to 'bubenik_dlotko_landscapes_2016' does not have an associated number /build/gudhi-2.3.0+dfsg/doc/Persistence_representations/Persistence_representations_doc.h:133: warning: \cite command to 'bubenik_dlotko_landscapes_2016' does not have an associated number /build/gudhi-2.3.0+dfsg/doc/Persistence_representations/Persistence_representations_doc.h:136: warning: \cite command to 'bubenik_dlotko_landscapes_2016' does not have an associated number /build/gudhi-2.3.0+dfsg/doc/Persistence_representations/Persistence_representations_doc.h:193: warning: \cite command to 'Fasy_Kim_Lecci_Maria_tda' does not have an associated number /build/gudhi-2.3.0+dfsg/doc/Persistence_representations/Persistence_representations_doc.h:200: warning: \cite command to 'Ferri_Frosini_comparision_sheme_1' does not have an associated number /build/gudhi-2.3.0+dfsg/doc/Persistence_representations/Persistence_representations_doc.h:200: warning: \cite command to 'Ferri_Frosini_comparision_sheme_2' does not have an associated number /build/gudhi-2.3.0+dfsg/doc/Persistence_representations/Persistence_representations_doc.h:201: warning: \cite command to 'Persistence_Images_2017' does not have an associated number /build/gudhi-2.3.0+dfsg/doc/Persistence_representations/Persistence_representations_doc.h:204: warning: \cite command to 'Kusano_Fukumizu_Hiraoka_PWGK' does not have an associated number /build/gudhi-2.3.0+dfsg/doc/Persistence_representations/Persistence_representations_doc.h:204: warning: \cite command to 'Reininghaus_Huber_ALL_PSSK' does not have an associated number /build/gudhi-2.3.0+dfsg/doc/Persistence_representations/Persistence_representations_doc.h:206: warning: \cite command to 'Kusano_Fukumizu_Hiraoka_PWGK' does not have an associated number /build/gudhi-2.3.0+dfsg/doc/Persistence_representations/Persistence_representations_doc.h:208: warning: \cite command to 'Reininghaus_Huber_ALL_PSSK' does not have an associated number /build/gudhi-2.3.0+dfsg/doc/Persistence_representations/Persistence_representations_doc.h:234: warning: \cite command to 'Carriere_Oudot_Ovsjanikov_top_signatures_3d' does not have an associated number /build/gudhi-2.3.0+dfsg/doc/Persistent_cohomology/Intro_persistent_cohomology.h:36: warning: \cite command to 'DBLP:journals/dcg/SilvaMV11' does not have an associated number /build/gudhi-2.3.0+dfsg/doc/Persistent_cohomology/Intro_persistent_cohomology.h:36: warning: \cite command to 'DBLP:journals/corr/abs-1208-5018' does not have an associated number /build/gudhi-2.3.0+dfsg/doc/Persistent_cohomology/Intro_persistent_cohomology.h:38: warning: \cite command to 'DBLP:conf/esa/BoissonnatDM13' does not have an associated number /build/gudhi-2.3.0+dfsg/doc/Persistent_cohomology/Intro_persistent_cohomology.h:111: warning: \cite command to 'Munkres-elementsalgtop1984' does not have an associated number /build/gudhi-2.3.0+dfsg/doc/Persistent_cohomology/Intro_persistent_cohomology.h:112: warning: \cite command to 'DBLP:books/daglib/0025666' does not have an associated number /build/gudhi-2.3.0+dfsg/doc/Persistent_cohomology/Intro_persistent_cohomology.h:126: warning: \cite command to 'DBLP:journals/dcg/ZomorodianC05' does not have an associated number /build/gudhi-2.3.0+dfsg/doc/Persistent_cohomology/Intro_persistent_cohomology.h:131: warning: \cite command to 'DBLP:journals/focm/CarlssonS10' does not have an associated number /build/gudhi-2.3.0+dfsg/doc/Rips_complex/Intro_rips_complex.h:90: warning: \cite command to 'sheehy13linear' does not have an associated number /build/gudhi-2.3.0+dfsg/doc/Rips_complex/Intro_rips_complex.h:91: warning: \cite command to 'buchet16efficient' does not have an associated number /build/gudhi-2.3.0+dfsg/doc/Rips_complex/Intro_rips_complex.h:96: warning: \cite command to 'cavanna15geometric' does not have an associated number /build/gudhi-2.3.0+dfsg/doc/Rips_complex/Intro_rips_complex.h:96: warning: \cite command to 'cavanna15visualizing' does not have an associated number /build/gudhi-2.3.0+dfsg/doc/Simplex_tree/Intro_simplex_tree.h:48: warning: \cite command to 'boissonnatmariasimplextreealgorithmica' does not have an associated number /build/gudhi-2.3.0+dfsg/doc/Tangential_complex/Intro_tangential_complex.h:44: warning: \cite command to 'tangentialcomplex2014' does not have an associated number /build/gudhi-2.3.0+dfsg/doc/Tangential_complex/Intro_tangential_complex.h:59: warning: \cite command to 'tangentialcomplex2014' does not have an associated number /build/gudhi-2.3.0+dfsg/doc/Witness_complex/Witness_complex_doc.h:23: warning: \cite command to 'de2004topological' does not have an associated number /build/gudhi-2.3.0+dfsg/doc/Witness_complex/Witness_complex_doc.h:43: warning: \cite command to 'de2004topological' does not have an associated number /build/gudhi-2.3.0+dfsg/include/gudhi/Edge_contraction.h:53: warning: \cite command to 'Garland' does not have an associated number /build/gudhi-2.3.0+dfsg/include/gudhi/Edge_contraction.h:53: warning: \cite command to 'Lindstrom' does not have an associated number /build/gudhi-2.3.0+dfsg/include/gudhi/Edge_contraction.h:81: warning: \cite command to 'Garland' does not have an associated number /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker.h:48: warning: \cite command to 'socg_blockers_2011' does not have an associated number /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker.h:48: warning: \cite command to 'blockers2012' does not have an associated number /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker.h:59: warning: \cite command to 'Munkres-elementsalgtop1984' does not have an associated number /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker.h:238: warning: \cite command to 'socg_blockers_2011' does not have an associated number /build/gudhi-2.3.0+dfsg/include/gudhi/Skeleton_blocker.h:238: warning: \cite command to 'blockers2012' does not have an associated number le include/gudhi/pick_n_random_points.h... Generating code for file include/gudhi/Point.h... Generating code for file include/gudhi/Points_3D_off_io.h... Generating code for file include/gudhi/Points_off_io.h... Generating code for file include/gudhi/PSSK.h... Generating code for file include/gudhi/random_point_generators.h... Generating code for file include/gudhi/read_persistence_from_file.h... Generating code for file include/gudhi/reader_utils.h... Generating code for file include/gudhi/Rips_complex.h... Generating code for file include/gudhi/Simple_object_pool.h... Generating code for file include/gudhi/Simplex_tree.h... Generating code for file include/gudhi/Simplex_tree/indexing_tag.h... Generating code for file include/gudhi/Simplex_tree/Simplex_tree_iterators.h... Generating code for file include/gudhi/Simplex_tree/Simplex_tree_node_explicit_storage.h... Generating code for file include/gudhi/Simplex_tree/Simplex_tree_siblings.h... Generating code for file include/gudhi/Skeleton_blocker.h... Generating code for file include/gudhi/Skeleton_blocker/internal/Top_faces.h... Generating code for file include/gudhi/Skeleton_blocker/internal/Trie.h... Generating code for file include/gudhi/Skeleton_blocker/iterators/Skeleton_blockers_blockers_iterators.h... Generating code for file include/gudhi/Skeleton_blocker/iterators/Skeleton_blockers_edges_iterators.h... Generating code for file include/gudhi/Skeleton_blocker/iterators/Skeleton_blockers_iterators.h... Generating code for file include/gudhi/Skeleton_blocker/iterators/Skeleton_blockers_simplices_iterators.h... Generating code for file include/gudhi/Skeleton_blocker/iterators/Skeleton_blockers_triangles_iterators.h... Generating code for file include/gudhi/Skeleton_blocker/iterators/Skeleton_blockers_vertices_iterators.h... Generating code for file include/gudhi/Skeleton_blocker/Skeleton_blocker_complex_visitor.h... Generating code for file include/gudhi/Skeleton_blocker/Skeleton_blocker_link_superior.h... Generating code for file include/gudhi/Skeleton_blocker/Skeleton_blocker_off_io.h... Generating code for file include/gudhi/Skeleton_blocker/Skeleton_blocker_simple_geometric_traits.h... Generating code for file include/gudhi/Skeleton_blocker/Skeleton_blocker_simple_traits.h... Generating code for file include/gudhi/Skeleton_blocker/Skeleton_blocker_simplex.h... Generating code for file include/gudhi/Skeleton_blocker/Skeleton_blocker_sub_complex.h... Generating code for file include/gudhi/Skeleton_blocker_complex.h... Generating code for file include/gudhi/Skeleton_blocker_contractor.h... Generating code for file include/gudhi/Skeleton_blocker_geometric_complex.h... Generating code for file include/gudhi/Skeleton_blocker_link_complex.h... Generating code for file include/gudhi/Skeleton_blocker_simplifiable_complex.h... Generating code for file include/gudhi/Sparse_rips_complex.h... Generating code for file include/gudhi/sparsify_point_set.h... Generating code for file include/gudhi/Strong_witness_complex.h... Generating code for file include/gudhi/Tangential_complex.h... Generating code for file include/gudhi/Tangential_complex/config.h... Generating code for file include/gudhi/Tangential_complex/Simplicial_complex.h... Generating code for file include/gudhi/Tangential_complex/utilities.h... Generating code for file include/gudhi/Unitary_tests_utils.h... Generating code for file include/gudhi/Witness_complex.h... Generating code for file include/gudhi/Witness_complex/all_faces_in.h... Generating code for file include/gudhi/writing_persistence_to_file.h... Generating code for file utilities/Alpha_complex/alpha_complex_3d_helper.h... Generating file documentation... Generating docs for file include/gudhi/distance_functions.h... Generating docs for file include/gudhi/reader_utils.h... Generating page documentation... Generating docs for page fileformats... Generating docs for page installation... Generating docs for page Citation... Generating docs for page citelist... Generating group documentation... Generating class documentation... Generating docs for compound Coe/build/gudhi-2.3.0+dfsg/include/gudhi/Simplex_tree.h:65: warning: \cite command to 'boissonnatmariasimplextreealgorithmica' does not have an associated number /build/gudhi-2.3.0+dfsg/include/gudhi/Alpha_complex.h:67: warning: \cite command to 'cgal:s-gkd-15b' does not have an associated number /build/gudhi-2.3.0+dfsg/include/gudhi/GIC.h:207: warning: \cite command to 'Carriere17c' does not have an associated number /build/gudhi-2.3.0+dfsg/include/gudhi/GIC.h:416: warning: \cite command to 'Carriere17c' does not have an associated number /build/gudhi-2.3.0+dfsg/include/gudhi/GIC.h:526: warning: \cite command to 'Carriere17c' does not have an associated number /build/gudhi-2.3.0+dfsg/include/gudhi/GIC.h:526: warning: \cite command to 'Carriere17c' does not have an associated number /build/gudhi-2.3.0+dfsg/include/gudhi/GIC.h:416: warning: \cite command to 'Carriere17c' does not have an associated number /build/gudhi-2.3.0+dfsg/include/gudhi/GIC.h:207: warning: \cite command to 'Carriere17c' does not have an associated number /build/gudhi-2.3.0+dfsg/include/gudhi/Persistence_landscape.h:59: warning: \cite command to 'bubenik_landscapes_2015' does not have an associated number /build/gudhi-2.3.0+dfsg/include/gudhi/Persistence_landscape.h:60: warning: \cite command to 'bubenik_dlotko_landscapes_2016' does not have an associated number fficientField... Generating docs for compound FilteredComplex... Generating docs for compound FiltrationValue... Generating docs for compound IndexingTag... Generating docs for compound PersistentHomology... Generating docs for compound SimplexKey... Generating docs for compound SimplexTreeOptions... Generating docs for compound VertexHandle... Generating namespace index... Generating docs for namespace Gudhi Generating docs for compound Gudhi::Euclidean_distance... Generating docs for compound Gudhi::linear_indexing_tag... Generating docs for compound Gudhi::Minimal_enclosing_ball_radius... Generating docs for compound Gudhi::Null_output_iterator... Generating docs for compound Gudhi::Off_reader... Generating docs for compound Gudhi::Persistence_interval_common... Generating docs for compound Gudhi::Points_3D_off_reader... Generating docs for compound Gudhi::Points_3D_off_visitor_reader... Generating docs for compound Gudhi::Points_off_reader... Generating docs for compound Gudhi::Points_off_visitor_reader... Generating docs for compound Gudhi::Simplex_tree... Generating docs for compound Gudhi::Simplex_tree_options_fast_persistence... Generating docs for compound Gudhi::Simplex_tree_options_full_featured... Generating docs for compound Gudhi::alpha_complex::Alpha_complex... Generating docs for compound Gudhi::alpha_complex::SimplicialComplexForAlpha... Generating docs for compound Gudhi::cech_complex::Cech_complex... Generating docs for compound Gudhi::cech_complex::SimplicialComplexForCech... Generating docs for compound Gudhi::contraction::Contraction_visitor... Generating docs for compound Gudhi::contraction::Contraction_visitor_remove_popable... Generating docs for compound Gudhi::contraction::Cost_policy... Generating docs for compound Gudhi::contraction::Dummy_valid_contraction... Generating docs for compound Gudhi::contraction::Edge_length_cost... Generating docs for compound Gudhi::contraction::First_vertex_placement... Generating docs for compound Gudhi::contraction::Link_condition_valid_contraction... Generating docs for compound Gudhi::contraction::Placement_policy... Generating docs for compound Gudhi::contraction::Skeleton_blocker_contractor... Generating docs for compound Gudhi::contraction::Valid_contraction_policy... Generating docs for compound Gudhi::cover_complex::Cover_complex... Generating docs for compound Gudhi::cubical_complex::Bitmap_cubical_complex... Generating docs for nested compound Gudhi::cubical_complex::Bitmap_cubical_complex::Filtration_simplex_range... Generating docs for nested compound Gudhi::cubical_complex::Bitmap_cubical_complex::Skeleton_simplex_range... Generating docs for compound Gudhi::cubical_complex::Bitmap_cubical_complex_base... Generating docs for nested compound Gudhi::cubical_complex::Bitmap_cubical_complex_base::All_cells_iterator... Generating docs for nested compound Gudhi::cubical_complex::Bitmap_cubical_complex_base::All_cells_range... Generating docs for nested compound Gudhi::cubical_complex::Bitmap_cubical_complex_base::Top_dimensional_cells_iterator... Generating docs for nested compound Gudhi::cubical_complex::Bitmap_cubical_complex_base::Top_dimensional_cells_range... Generating docs for compound Gudhi::cubical_complex::Bitmap_cubical_complex_periodic_boundary_conditions_base... Generating docs for compound Gudhi::cubical_complex::counter... Generating docs for compound Gudhi::persistence_diagram::DiagramPoint... Generating docs for compound Gudhi::persistence_diagram::PersistenceDiagram... Generating docs for compound Gudhi::Persistence_representations::arc_tan_of_persistence_of_point... Generating docs for compound Gudhi::Persistence_representations::constant_scaling_function... Generating docs for compound Gudhi::Persistence_representations::distance_from_diagonal_scaling... Generating docs for compound Gudhi::Persistence_representations::Persistence_heat_maps... Generating docs for compound Gudhi::Persistence_representations::Persistence_intervals... Generating docs for compound Gudhi::Persistence_representations::Persistence_landscape... Generating doc/build/gudhi-2.3.0+dfsg/include/gudhi/Persistence_vectors.h:58: warning: \cite command to 'Carriere_Oudot_Ovsjanikov_top_signatures_3d' does not have an associated number /build/gudhi-2.3.0+dfsg/include/gudhi/Persistent_cohomology/Multi_field.h:38: warning: \cite command to 'boissonnat:hal-00922572' does not have an associated number /build/gudhi-2.3.0+dfsg/include/gudhi/Persistent_cohomology.h:53: warning: \cite command to 'DBLP:conf/esa/BoissonnatDM13' does not have an associated number /build/gudhi-2.3.0+dfsg/include/gudhi/Persistent_cohomology.h:55: warning: \cite command to 'boissonnat:hal-00922572' does not have an associated number s for compound Gudhi::Persistence_representations::Persistence_landscape_on_grid... Generating docs for compound Gudhi::Persistence_representations::PSSK... Generating docs for compound Gudhi::Persistence_representations::Real_valued_topological_data... Generating docs for compound Gudhi::Persistence_representations::squared_distance_from_diagonal_scaling... Generating docs for compound Gudhi::Persistence_representations::Topological_data_with_averages... Generating docs for compound Gudhi::Persistence_representations::Topological_data_with_distances... Generating docs for compound Gudhi::Persistence_representations::Topological_data_with_scalar_product... Generating docs for compound Gudhi::Persistence_representations::Vector_distances_in_diagram... Generating docs for compound Gudhi::Persistence_representations::Vectorized_topological_data... Generating docs for compound Gudhi::Persistence_representations::weight_by_setting_maximal_interval_to_have_length_one... Generating docs for compound Gudhi::persistent_cohomology::Field_Zp... Generating docs for compound Gudhi::persistent_cohomology::Multi_field... Generating docs for compound Gudhi::persistent_cohomology::Persistent_cohomology... Generating docs for compound Gudhi::rips_complex::Rips_complex... Generating docs for compound Gudhi::rips_complex::SimplicialComplexForRips... Generating docs for compound Gudhi::rips_complex::Sparse_rips_complex... Generating docs for compound Gudhi::skeleton_blocker::Blocker_iterator_around_vertex_internal... Generating docs for compound Gudhi::skeleton_blocker::Blocker_iterator_internal... Generating docs for compound Gudhi::skeleton_blocker::Dummy_complex_visitor... Generating docs for compound Gudhi::skeleton_blocker::Edge_iterator... Generating docs for compound Gudhi::skeleton_blocker::Print_complex_visitor... Generating docs for compound Gudhi::skeleton_blocker::Simplex_around_vertex_iterator... Generating docs for compound Gudhi::skeleton_blocker::Simplex_coboundary_iterator... Generating docs for compound Gudhi::skeleton_blocker::Skeleton_blocker_complex... Generating docs for compound Gudhi::skeleton_blocker::Skeleton_blocker_complex_visitor... Generating docs for compound Gudhi::skeleton_blocker::Skeleton_blocker_geometric_complex... Generating docs for compound Gudhi::skeleton_blocker::Skeleton_blocker_link_complex... Generating docs for compound Gudhi::skeleton_blocker::Skeleton_blocker_link_superior... Generating docs for compound Gudhi::skeleton_blocker::Skeleton_blocker_off_flag_visitor_reader... Generating docs for compound Gudhi::skeleton_blocker::Skeleton_blocker_off_reader... Generating docs for compound Gudhi::skeleton_blocker::Skeleton_blocker_off_visitor_reader... Generating docs for compound Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits... Generating docs for nested compound Gudhi::skeleton_blocker::Skeleton_blocker_simple_geometric_traits::Simple_geometric_vertex... Generating docs for compound Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits... Generating docs for nested compound Gudhi::skeleton_blocker::Skeleton_blocker_simple_traits::Root_vertex_handle... Generating docs for compound Gudhi::skeleton_blocker::Skeleton_blocker_simplex... Generating docs for compound Gudhi::skeleton_blocker::Skeleton_blocker_sub_complex... Generating docs for compound Gudhi::skeleton_blocker::SkeletonBlockerDS... Generating docs for nested compound Gudhi::skeleton_blocker::SkeletonBlockerDS::Graph_edge... Generating docs for nested compound Gudhi::skeleton_blocker::SkeletonBlockerDS::Graph_vertex... Generating docs for nested compound Gudhi::skeleton_blocker::SkeletonBlockerDS::Root_vertex_handle... Generating docs for nested compound Gudhi::skeleton_blocker::SkeletonBlockerDS::Vertex_handle... Generating docs for compound Gudhi::skeleton_blocker::SkeletonBlockerGeometricDS... Generating docs for nested compound Gudhi::skeleton_blocker::SkeletonBlockerGeometricDS::Graph_Edge... Generating docs for nested compound Gudhi::skeleton_blocker::SkeletonBlockerGeometricDS::Graph_vertex... Generating docs for/build/gudhi-2.3.0+dfsg/doc/common/main_page.h:21: warning: \cite command to 'gudhilibrary_ICMS14' does not have an associated number /build/gudhi-2.3.0+dfsg/doc/common/main_page.h:107: warning: \cite command to 'boissonnatmariasimplextreealgorithmica' does not have an associated number /build/gudhi-2.3.0+dfsg/doc/common/main_page.h:142: warning: \cite command to 'socg_blockers_2011' does not have an associated number /build/gudhi-2.3.0+dfsg/doc/common/main_page.h:142: warning: \cite command to 'blockers2012' does not have an associated number /build/gudhi-2.3.0+dfsg/doc/common/main_page.h:183: warning: \cite command to 'boissonnatmariasimplextreealgorithmica' does not have an associated number /build/gudhi-2.3.0+dfsg/doc/common/main_page.h:244: warning: \cite command to 'DBLP:journals/dcg/SilvaMV11' does not have an associated number /build/gudhi-2.3.0+dfsg/doc/common/main_page.h:245: warning: \cite command to 'DBLP:journals/corr/abs-1208-5018' does not have an associated number /build/gudhi-2.3.0+dfsg/doc/common/main_page.h:246: warning: \cite command to 'DBLP:conf/esa/BoissonnatDM13' does not have an associated number compound Gudhi::skeleton_blocker::Triangle_around_vertex_iterator... Generating docs for compound Gudhi::skeleton_blocker::Triangle_iterator... Generating docs for compound Gudhi::skeleton_blocker::Vertex_iterator... Generating docs for compound Gudhi::spatial_searching::Kd_tree_search... Generating docs for compound Gudhi::tangential_complex::Tangential_complex... Generating docs for nested compound Gudhi::tangential_complex::Tangential_complex::Fix_inconsistencies_info... Generating docs for nested compound Gudhi::tangential_complex::Tangential_complex::Num_inconsistencies... Generating docs for compound Gudhi::witness_complex::Euclidean_strong_witness_complex... Generating docs for compound Gudhi::witness_complex::Euclidean_witness_complex... Generating docs for compound Gudhi::witness_complex::SimplicialComplexForWitness... Generating docs for compound Gudhi::witness_complex::Strong_witness_complex... Generating docs for compound Gudhi::witness_complex::Witness_complex... Generating docs for namespace persistence_graphical_tools Generating docs for namespace python3 Generating graph info page... Generating directory documentation... Generating dependency graph for directory utilities/Bitmap_cubical_complex Generating dependency graph for directory utilities/Bottleneck_distance Generating dependency graph for directory utilities/Cech_complex Generating dependency graph for directory cython Generating dependency graph for directory cython/include Generating dependency graph for directory utilities/Rips_complex Generating dependency graph for directory utilities Generating index page... Generating page index... Generating module index... Generating namespace index... Generating namespace member index... Generating annotated compound index... Generating alphabetical compound index... Generating hierarchical class index... Generating graphical class hierarchy... Generating member index... Generating file index... Generating file member index... Generating example index... finalizing index lists... writing tag file... Running dot... Generating dot graphs using 19 parallel threads... 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/usr/bin/cmake -S/build/gudhi-2.3.0+dfsg -B/build/gudhi-2.3.0+dfsg/build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/gudhi-2.3.0+dfsg/build/CMakeFiles /build/gudhi-2.3.0+dfsg/build/CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[3]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make -f example/common/CMakeFiles/cgal_3D_off_reader.dir/build.make example/common/CMakeFiles/cgal_3D_off_reader.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/common /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/common /build/gudhi-2.3.0+dfsg/build/example/common/CMakeFiles/cgal_3D_off_reader.dir/DependInfo.cmake --color= make -f example/common/CMakeFiles/vector_double_off_reader.dir/build.make example/common/CMakeFiles/vector_double_off_reader.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/common /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/common /build/gudhi-2.3.0+dfsg/build/example/common/CMakeFiles/vector_double_off_reader.dir/DependInfo.cmake --color= make -f example/common/CMakeFiles/cgal_off_reader.dir/build.make example/common/CMakeFiles/cgal_off_reader.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/common /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/common /build/gudhi-2.3.0+dfsg/build/example/common/CMakeFiles/cgal_off_reader.dir/DependInfo.cmake --color= make -f utilities/common/CMakeFiles/off_file_from_shape_generator.dir/build.make utilities/common/CMakeFiles/off_file_from_shape_generator.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/common /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/common /build/gudhi-2.3.0+dfsg/build/utilities/common/CMakeFiles/off_file_from_shape_generator.dir/DependInfo.cmake --color= make -f example/Alpha_complex/CMakeFiles/Alpha_complex_example_from_off.dir/build.make example/Alpha_complex/CMakeFiles/Alpha_complex_example_from_off.dir/depend make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Alpha_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Alpha_complex /build/gudhi-2.3.0+dfsg/build/example/Alpha_complex/CMakeFiles/Alpha_complex_example_from_off.dir/DependInfo.cmake --color= make -f example/common/CMakeFiles/cgal_3D_off_reader.dir/build.make example/common/CMakeFiles/cgal_3D_off_reader.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/common/CMakeFiles/cgal_3D_off_reader.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/common/CMakeFiles/vector_double_off_reader.dir/build.make example/common/CMakeFiles/vector_double_off_reader.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/common/CMakeFiles/vector_double_off_reader.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/common/CMakeFiles/off_file_from_shape_generator.dir/build.make utilities/common/CMakeFiles/off_file_from_shape_generator.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Alpha_complex/CMakeFiles/Alpha_complex_example_from_off.dir/build.make example/Alpha_complex/CMakeFiles/Alpha_complex_example_from_off.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/common/CMakeFiles/off_file_from_shape_generator.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Alpha_complex/CMakeFiles/Alpha_complex_example_from_off.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/common/CMakeFiles/cgal_off_reader.dir/build.make example/common/CMakeFiles/cgal_off_reader.dir/build [ 1%] Built target cgal_3D_off_reader [ 2%] Built target vector_double_off_reader make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/common/CMakeFiles/cgal_off_reader.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 3%] Built target off_file_from_shape_generator make -f example/Alpha_complex/CMakeFiles/Alpha_complex_example_from_points.dir/build.make example/Alpha_complex/CMakeFiles/Alpha_complex_example_from_points.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Alpha_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Alpha_complex /build/gudhi-2.3.0+dfsg/build/example/Alpha_complex/CMakeFiles/Alpha_complex_example_from_points.dir/DependInfo.cmake --color= [ 3%] Built target Alpha_complex_example_from_off make -f utilities/Alpha_complex/CMakeFiles/exact_alpha_complex_3d_persistence.dir/build.make 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-E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Alpha_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Alpha_complex /build/gudhi-2.3.0+dfsg/build/utilities/Alpha_complex/CMakeFiles/alpha_complex_3d_persistence.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Alpha_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Alpha_complex /build/gudhi-2.3.0+dfsg/build/utilities/Alpha_complex/CMakeFiles/weighted_alpha_complex_3d_persistence.dir/DependInfo.cmake --color= make -f utilities/Alpha_complex/CMakeFiles/alpha_complex_persistence.dir/build.make utilities/Alpha_complex/CMakeFiles/alpha_complex_persistence.dir/depend make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Alpha_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Alpha_complex /build/gudhi-2.3.0+dfsg/build/utilities/Alpha_complex/CMakeFiles/alpha_complex_persistence.dir/DependInfo.cmake --color= make -f example/Alpha_complex/CMakeFiles/Alpha_complex_example_from_points.dir/build.make example/Alpha_complex/CMakeFiles/Alpha_complex_example_from_points.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Alpha_complex/CMakeFiles/Alpha_complex_example_from_points.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Alpha_complex/CMakeFiles/exact_alpha_complex_3d_persistence.dir/build.make utilities/Alpha_complex/CMakeFiles/exact_alpha_complex_3d_persistence.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Alpha_complex/CMakeFiles/exact_alpha_complex_3d_persistence.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Alpha_complex/CMakeFiles/alpha_complex_3d_persistence.dir/build.make utilities/Alpha_complex/CMakeFiles/alpha_complex_3d_persistence.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Alpha_complex/CMakeFiles/alpha_complex_3d_persistence.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Alpha_complex/CMakeFiles/weighted_alpha_complex_3d_persistence.dir/build.make utilities/Alpha_complex/CMakeFiles/weighted_alpha_complex_3d_persistence.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Alpha_complex/CMakeFiles/weighted_alpha_complex_3d_persistence.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Alpha_complex/CMakeFiles/alpha_complex_persistence.dir/build.make utilities/Alpha_complex/CMakeFiles/alpha_complex_persistence.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Alpha_complex/CMakeFiles/alpha_complex_persistence.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 5%] Built target Alpha_complex_example_from_points [ 5%] Built target exact_alpha_complex_3d_persistence make -f utilities/Alpha_complex/CMakeFiles/periodic_alpha_complex_3d_persistence.dir/build.make utilities/Alpha_complex/CMakeFiles/periodic_alpha_complex_3d_persistence.dir/depend [ 6%] Built target alpha_complex_3d_persistence make -f utilities/Alpha_complex/CMakeFiles/weighted_periodic_alpha_complex_3d_persistence.dir/build.make utilities/Alpha_complex/CMakeFiles/weighted_periodic_alpha_complex_3d_persistence.dir/depend [ 7%] Built target weighted_alpha_complex_3d_persistence make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Alpha_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Alpha_complex /build/gudhi-2.3.0+dfsg/build/utilities/Alpha_complex/CMakeFiles/periodic_alpha_complex_3d_persistence.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Alpha_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Alpha_complex /build/gudhi-2.3.0+dfsg/build/utilities/Alpha_complex/CMakeFiles/weighted_periodic_alpha_complex_3d_persistence.dir/DependInfo.cmake --color= make -f example/Bitmap_cubical_complex/CMakeFiles/Random_bitmap_cubical_complex.dir/build.make example/Bitmap_cubical_complex/CMakeFiles/Random_bitmap_cubical_complex.dir/depend [ 8%] Built target alpha_complex_persistence make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Bitmap_cubical_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Bitmap_cubical_complex /build/gudhi-2.3.0+dfsg/build/example/Bitmap_cubical_complex/CMakeFiles/Random_bitmap_cubical_complex.dir/DependInfo.cmake --color= make -f utilities/Bitmap_cubical_complex/CMakeFiles/periodic_cubical_complex_persistence.dir/build.make utilities/Bitmap_cubical_complex/CMakeFiles/periodic_cubical_complex_persistence.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Bitmap_cubical_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Bitmap_cubical_complex /build/gudhi-2.3.0+dfsg/build/utilities/Bitmap_cubical_complex/CMakeFiles/periodic_cubical_complex_persistence.dir/DependInfo.cmake --color= make -f utilities/Bitmap_cubical_complex/CMakeFiles/cubical_complex_persistence.dir/build.make utilities/Bitmap_cubical_complex/CMakeFiles/cubical_complex_persistence.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Bitmap_cubical_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Bitmap_cubical_complex /build/gudhi-2.3.0+dfsg/build/utilities/Bitmap_cubical_complex/CMakeFiles/cubical_complex_persistence.dir/DependInfo.cmake --color= make -f example/Bottleneck_distance/CMakeFiles/alpha_rips_persistence_bottleneck_distance.dir/build.make example/Bottleneck_distance/CMakeFiles/alpha_rips_persistence_bottleneck_distance.dir/depend make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Bottleneck_distance /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Bottleneck_distance /build/gudhi-2.3.0+dfsg/build/example/Bottleneck_distance/CMakeFiles/alpha_rips_persistence_bottleneck_distance.dir/DependInfo.cmake --color= make -f utilities/Alpha_complex/CMakeFiles/periodic_alpha_complex_3d_persistence.dir/build.make utilities/Alpha_complex/CMakeFiles/periodic_alpha_complex_3d_persistence.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Alpha_complex/CMakeFiles/periodic_alpha_complex_3d_persistence.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Alpha_complex/CMakeFiles/weighted_periodic_alpha_complex_3d_persistence.dir/build.make utilities/Alpha_complex/CMakeFiles/weighted_periodic_alpha_complex_3d_persistence.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Alpha_complex/CMakeFiles/weighted_periodic_alpha_complex_3d_persistence.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Bitmap_cubical_complex/CMakeFiles/Random_bitmap_cubical_complex.dir/build.make example/Bitmap_cubical_complex/CMakeFiles/Random_bitmap_cubical_complex.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Bitmap_cubical_complex/CMakeFiles/Random_bitmap_cubical_complex.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Bitmap_cubical_complex/CMakeFiles/periodic_cubical_complex_persistence.dir/build.make utilities/Bitmap_cubical_complex/CMakeFiles/periodic_cubical_complex_persistence.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Bitmap_cubical_complex/CMakeFiles/periodic_cubical_complex_persistence.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Bitmap_cubical_complex/CMakeFiles/cubical_complex_persistence.dir/build.make utilities/Bitmap_cubical_complex/CMakeFiles/cubical_complex_persistence.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Bitmap_cubical_complex/CMakeFiles/cubical_complex_persistence.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Bottleneck_distance/CMakeFiles/alpha_rips_persistence_bottleneck_distance.dir/build.make example/Bottleneck_distance/CMakeFiles/alpha_rips_persistence_bottleneck_distance.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Bottleneck_distance/CMakeFiles/alpha_rips_persistence_bottleneck_distance.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 9%] Built target periodic_alpha_complex_3d_persistence [ 10%] Built target weighted_periodic_alpha_complex_3d_persistence [ 11%] Built target Random_bitmap_cubical_complex make -f example/Bottleneck_distance/CMakeFiles/bottleneck_basic_example.dir/build.make example/Bottleneck_distance/CMakeFiles/bottleneck_basic_example.dir/depend [ 12%] Built target periodic_cubical_complex_persistence make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Bottleneck_distance /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Bottleneck_distance /build/gudhi-2.3.0+dfsg/build/example/Bottleneck_distance/CMakeFiles/bottleneck_basic_example.dir/DependInfo.cmake --color= make -f utilities/Bottleneck_distance/CMakeFiles/bottleneck_distance.dir/build.make utilities/Bottleneck_distance/CMakeFiles/bottleneck_distance.dir/depend [ 13%] Built target cubical_complex_persistence make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Bottleneck_distance /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Bottleneck_distance /build/gudhi-2.3.0+dfsg/build/utilities/Bottleneck_distance/CMakeFiles/bottleneck_distance.dir/DependInfo.cmake --color= make -f example/Cech_complex/CMakeFiles/Cech_complex_example_step_by_step.dir/build.make example/Cech_complex/CMakeFiles/Cech_complex_example_step_by_step.dir/depend [ 14%] Built target alpha_rips_persistence_bottleneck_distance make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Cech_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Cech_complex /build/gudhi-2.3.0+dfsg/build/example/Cech_complex/CMakeFiles/Cech_complex_example_step_by_step.dir/DependInfo.cmake --color= make -f example/Cech_complex/CMakeFiles/Cech_complex_example_from_points.dir/build.make example/Cech_complex/CMakeFiles/Cech_complex_example_from_points.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Cech_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Cech_complex /build/gudhi-2.3.0+dfsg/build/example/Cech_complex/CMakeFiles/Cech_complex_example_from_points.dir/DependInfo.cmake --color= make -f utilities/Cech_complex/CMakeFiles/cech_persistence.dir/build.make utilities/Cech_complex/CMakeFiles/cech_persistence.dir/depend make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Cech_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Cech_complex /build/gudhi-2.3.0+dfsg/build/utilities/Cech_complex/CMakeFiles/cech_persistence.dir/DependInfo.cmake --color= make -f example/Bottleneck_distance/CMakeFiles/bottleneck_basic_example.dir/build.make example/Bottleneck_distance/CMakeFiles/bottleneck_basic_example.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Contraction/CMakeFiles/GarlandHeckbert.dir/build.make example/Contraction/CMakeFiles/GarlandHeckbert.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Bottleneck_distance/CMakeFiles/bottleneck_basic_example.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Contraction /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Contraction /build/gudhi-2.3.0+dfsg/build/example/Contraction/CMakeFiles/GarlandHeckbert.dir/DependInfo.cmake --color= make -f utilities/Bottleneck_distance/CMakeFiles/bottleneck_distance.dir/build.make utilities/Bottleneck_distance/CMakeFiles/bottleneck_distance.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Bottleneck_distance/CMakeFiles/bottleneck_distance.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Cech_complex/CMakeFiles/Cech_complex_example_step_by_step.dir/build.make example/Cech_complex/CMakeFiles/Cech_complex_example_step_by_step.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Cech_complex/CMakeFiles/Cech_complex_example_step_by_step.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Cech_complex/CMakeFiles/Cech_complex_example_from_points.dir/build.make example/Cech_complex/CMakeFiles/Cech_complex_example_from_points.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Cech_complex/CMakeFiles/Cech_complex_example_from_points.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Cech_complex/CMakeFiles/cech_persistence.dir/build.make utilities/Cech_complex/CMakeFiles/cech_persistence.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Cech_complex/CMakeFiles/cech_persistence.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Contraction/CMakeFiles/GarlandHeckbert.dir/build.make example/Contraction/CMakeFiles/GarlandHeckbert.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Contraction/CMakeFiles/GarlandHeckbert.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 15%] Built target bottleneck_basic_example [ 16%] Built target bottleneck_distance [ 17%] Built target Cech_complex_example_step_by_step [ 18%] Built target Cech_complex_example_from_points make -f example/Contraction/CMakeFiles/RipsContraction.dir/build.make example/Contraction/CMakeFiles/RipsContraction.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Contraction /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Contraction /build/gudhi-2.3.0+dfsg/build/example/Contraction/CMakeFiles/RipsContraction.dir/DependInfo.cmake --color= [ 19%] Built target cech_persistence make -f example/Persistence_representations/CMakeFiles/Persistence_representations_example_landscape.dir/build.make example/Persistence_representations/CMakeFiles/Persistence_representations_example_landscape.dir/depend make -f example/Persistence_representations/CMakeFiles/Persistence_representations_example_landscape_on_grid.dir/build.make example/Persistence_representations/CMakeFiles/Persistence_representations_example_landscape_on_grid.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Persistence_representations /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Persistence_representations /build/gudhi-2.3.0+dfsg/build/example/Persistence_representations/CMakeFiles/Persistence_representations_example_landscape.dir/DependInfo.cmake --color= [ 20%] Built target GarlandHeckbert make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Persistence_representations /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Persistence_representations /build/gudhi-2.3.0+dfsg/build/example/Persistence_representations/CMakeFiles/Persistence_representations_example_landscape_on_grid.dir/DependInfo.cmake --color= make -f example/Persistence_representations/CMakeFiles/Persistence_representations_example_intervals.dir/build.make example/Persistence_representations/CMakeFiles/Persistence_representations_example_intervals.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Persistence_representations /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Persistence_representations /build/gudhi-2.3.0+dfsg/build/example/Persistence_representations/CMakeFiles/Persistence_representations_example_intervals.dir/DependInfo.cmake --color= make -f example/Persistence_representations/CMakeFiles/Persistence_representations_example_vectors.dir/build.make example/Persistence_representations/CMakeFiles/Persistence_representations_example_vectors.dir/depend make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Contraction/CMakeFiles/RipsContraction.dir/build.make example/Contraction/CMakeFiles/RipsContraction.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Persistence_representations /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Persistence_representations /build/gudhi-2.3.0+dfsg/build/example/Persistence_representations/CMakeFiles/Persistence_representations_example_vectors.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Contraction/CMakeFiles/RipsContraction.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Persistence_representations/CMakeFiles/Persistence_representations_example_landscape.dir/build.make example/Persistence_representations/CMakeFiles/Persistence_representations_example_landscape.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Persistence_representations/CMakeFiles/Persistence_representations_example_landscape.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Persistence_representations/CMakeFiles/Persistence_representations_example_landscape_on_grid.dir/build.make example/Persistence_representations/CMakeFiles/Persistence_representations_example_landscape_on_grid.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Persistence_representations/CMakeFiles/Persistence_representations_example_landscape_on_grid.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Persistence_representations/CMakeFiles/Persistence_representations_example_intervals.dir/build.make example/Persistence_representations/CMakeFiles/Persistence_representations_example_intervals.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Persistence_representations/CMakeFiles/Persistence_representations_example_intervals.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Persistence_representations/CMakeFiles/Persistence_representations_example_vectors.dir/build.make example/Persistence_representations/CMakeFiles/Persistence_representations_example_vectors.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Persistence_representations/CMakeFiles/Persistence_representations_example_vectors.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 21%] Built target RipsContraction make -f example/Persistence_representations/CMakeFiles/Persistence_representations_example_heat_maps.dir/build.make example/Persistence_representations/CMakeFiles/Persistence_representations_example_heat_maps.dir/depend [ 22%] Built target Persistence_representations_example_landscape make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Persistence_representations /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Persistence_representations /build/gudhi-2.3.0+dfsg/build/example/Persistence_representations/CMakeFiles/Persistence_representations_example_heat_maps.dir/DependInfo.cmake --color= make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/compute_distance_of_persistence_heat_maps.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/compute_distance_of_persistence_heat_maps.dir/depend [ 23%] Built target Persistence_representations_example_landscape_on_grid [ 23%] Built target Persistence_representations_example_vectors make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/compute_distance_of_persistence_heat_maps.dir/DependInfo.cmake --color= [ 24%] Built target Persistence_representations_example_intervals make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_arctan_of_their_persistence.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_arctan_of_their_persistence.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_arctan_of_their_persistence.dir/DependInfo.cmake --color= make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_pssk.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_pssk.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_pssk.dir/DependInfo.cmake --color= make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/average_persistence_heat_maps.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/average_persistence_heat_maps.dir/depend make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/average_persistence_heat_maps.dir/DependInfo.cmake --color= make -f example/Persistence_representations/CMakeFiles/Persistence_representations_example_heat_maps.dir/build.make example/Persistence_representations/CMakeFiles/Persistence_representations_example_heat_maps.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Persistence_representations/CMakeFiles/Persistence_representations_example_heat_maps.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/compute_distance_of_persistence_heat_maps.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/compute_distance_of_persistence_heat_maps.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/compute_distance_of_persistence_heat_maps.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_arctan_of_their_persistence.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_arctan_of_their_persistence.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_arctan_of_their_persistence.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_pssk.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_pssk.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_pssk.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/average_persistence_heat_maps.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/average_persistence_heat_maps.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/average_persistence_heat_maps.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 25%] Built target Persistence_representations_example_heat_maps [ 26%] Built target compute_distance_of_persistence_heat_maps [ 27%] Built target create_p_h_m_weighted_by_arctan_of_their_persistence make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_distance_from_diagonal.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_distance_from_diagonal.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_distance_from_diagonal.dir/DependInfo.cmake --color= make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_squared_diag_distance.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_squared_diag_distance.dir/depend [ 28%] Built target create_pssk make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_squared_diag_distance.dir/DependInfo.cmake --color= [ 28%] Built target average_persistence_heat_maps make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/compute_scalar_product_of_persistence_heat_maps.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/compute_scalar_product_of_persistence_heat_maps.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/compute_scalar_product_of_persistence_heat_maps.dir/DependInfo.cmake --color= make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_persistence_heat_maps.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_persistence_heat_maps.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_persistence_heat_maps.dir/DependInfo.cmake --color= make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/plot_persistence_heat_map.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/plot_persistence_heat_map.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/plot_persistence_heat_map.dir/DependInfo.cmake --color= make -f utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_persistence_intervals.dir/build.make utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_persistence_intervals.dir/depend make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_intervals /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_persistence_intervals.dir/DependInfo.cmake --color= make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_distance_from_diagonal.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_distance_from_diagonal.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_squared_diag_distance.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_squared_diag_distance.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_distance_from_diagonal.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_squared_diag_distance.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/compute_scalar_product_of_persistence_heat_maps.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/compute_scalar_product_of_persistence_heat_maps.dir/build make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_persistence_heat_maps.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_persistence_heat_maps.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/compute_scalar_product_of_persistence_heat_maps.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/plot_persistence_heat_map.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/plot_persistence_heat_map.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_persistence_heat_maps.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_persistence_intervals.dir/build.make utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_persistence_intervals.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/plot_persistence_heat_map.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_persistence_intervals.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 29%] Built target create_p_h_m_weighted_by_distance_from_diagonal [ 30%] Built target create_p_h_m_weighted_by_squared_diag_distance make -f utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_number_of_dominant_intervals.dir/build.make utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_number_of_dominant_intervals.dir/depend [ 31%] Built target compute_scalar_product_of_persistence_heat_maps make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_intervals /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_number_of_dominant_intervals.dir/DependInfo.cmake --color= make -f utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_histogram_of_intervals_lengths.dir/build.make utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_histogram_of_intervals_lengths.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_intervals /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_histogram_of_intervals_lengths.dir/DependInfo.cmake --color= make -f utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_persistence_Betti_numbers.dir/build.make utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_persistence_Betti_numbers.dir/depend [ 32%] Built target create_persistence_heat_maps make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_intervals /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_persistence_Betti_numbers.dir/DependInfo.cmake --color= make -f utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_birth_death_range_in_persistence_diagram.dir/build.make utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_birth_death_range_in_persistence_diagram.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_intervals /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_birth_death_range_in_persistence_diagram.dir/DependInfo.cmake --color= make -f utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_bottleneck_distance.dir/build.make utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_bottleneck_distance.dir/depend [ 32%] Built target plot_persistence_intervals make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_intervals /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_bottleneck_distance.dir/DependInfo.cmake --color= make -f utilities/Persistence_representations/persistence_landscapes/CMakeFiles/plot_landscapes.dir/build.make utilities/Persistence_representations/persistence_landscapes/CMakeFiles/plot_landscapes.dir/depend [ 33%] Built target plot_persistence_heat_map make -f utilities/Persistence_representations/persistence_landscapes/CMakeFiles/create_landscapes.dir/build.make utilities/Persistence_representations/persistence_landscapes/CMakeFiles/create_landscapes.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes/CMakeFiles/plot_landscapes.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes/CMakeFiles/create_landscapes.dir/DependInfo.cmake --color= make -f utilities/Persistence_representations/persistence_landscapes/CMakeFiles/average_landscapes.dir/build.make utilities/Persistence_representations/persistence_landscapes/CMakeFiles/average_landscapes.dir/depend make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes/CMakeFiles/average_landscapes.dir/DependInfo.cmake --color= make -f utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_number_of_dominant_intervals.dir/build.make utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_number_of_dominant_intervals.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_histogram_of_intervals_lengths.dir/build.make utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_histogram_of_intervals_lengths.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_number_of_dominant_intervals.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_histogram_of_intervals_lengths.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_persistence_Betti_numbers.dir/build.make utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_persistence_Betti_numbers.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_persistence_Betti_numbers.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_birth_death_range_in_persistence_diagram.dir/build.make utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_birth_death_range_in_persistence_diagram.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_birth_death_range_in_persistence_diagram.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_bottleneck_distance.dir/build.make utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_bottleneck_distance.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_landscapes/CMakeFiles/plot_landscapes.dir/build.make utilities/Persistence_representations/persistence_landscapes/CMakeFiles/plot_landscapes.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_bottleneck_distance.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_landscapes/CMakeFiles/plot_landscapes.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_landscapes/CMakeFiles/create_landscapes.dir/build.make utilities/Persistence_representations/persistence_landscapes/CMakeFiles/create_landscapes.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_landscapes/CMakeFiles/create_landscapes.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_landscapes/CMakeFiles/average_landscapes.dir/build.make utilities/Persistence_representations/persistence_landscapes/CMakeFiles/average_landscapes.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_landscapes/CMakeFiles/average_landscapes.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 34%] Built target compute_number_of_dominant_intervals [ 35%] Built target plot_histogram_of_intervals_lengths [ 36%] Built target plot_persistence_Betti_numbers [ 37%] Built target compute_birth_death_range_in_persistence_diagram [ 38%] Built target compute_bottleneck_distance [ 39%] Built target plot_landscapes make -f utilities/Persistence_representations/persistence_landscapes/CMakeFiles/compute_distance_of_landscapes.dir/build.make utilities/Persistence_representations/persistence_landscapes/CMakeFiles/compute_distance_of_landscapes.dir/depend [ 40%] Built target create_landscapes make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes/CMakeFiles/compute_distance_of_landscapes.dir/DependInfo.cmake --color= make -f utilities/Persistence_representations/persistence_landscapes/CMakeFiles/compute_scalar_product_of_landscapes.dir/build.make utilities/Persistence_representations/persistence_landscapes/CMakeFiles/compute_scalar_product_of_landscapes.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes/CMakeFiles/compute_scalar_product_of_landscapes.dir/DependInfo.cmake --color= make -f utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/plot_landscapes_on_grid.dir/build.make utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/plot_landscapes_on_grid.dir/depend [ 41%] Built target average_landscapes make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes_on_grid /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes_on_grid /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/plot_landscapes_on_grid.dir/DependInfo.cmake --color= make -f utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/create_landscapes_on_grid.dir/build.make utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/create_landscapes_on_grid.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes_on_grid /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes_on_grid /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/create_landscapes_on_grid.dir/DependInfo.cmake --color= make -f utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/compute_distance_of_landscapes_on_grid.dir/build.make utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/compute_distance_of_landscapes_on_grid.dir/depend make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes_on_grid /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes_on_grid /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/compute_distance_of_landscapes_on_grid.dir/DependInfo.cmake --color= make -f utilities/Persistence_representations/persistence_landscapes/CMakeFiles/compute_distance_of_landscapes.dir/build.make utilities/Persistence_representations/persistence_landscapes/CMakeFiles/compute_distance_of_landscapes.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_landscapes/CMakeFiles/compute_distance_of_landscapes.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/compute_scalar_product_of_landscapes_on_grid.dir/build.make utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/compute_scalar_product_of_landscapes_on_grid.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes_on_grid /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes_on_grid /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/compute_scalar_product_of_landscapes_on_grid.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_landscapes/CMakeFiles/compute_scalar_product_of_landscapes.dir/build.make utilities/Persistence_representations/persistence_landscapes/CMakeFiles/compute_scalar_product_of_landscapes.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_landscapes/CMakeFiles/compute_scalar_product_of_landscapes.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/average_landscapes_on_grid.dir/build.make utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/average_landscapes_on_grid.dir/depend make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes_on_grid /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes_on_grid /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/average_landscapes_on_grid.dir/DependInfo.cmake --color= make -f utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/plot_landscapes_on_grid.dir/build.make utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/plot_landscapes_on_grid.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/plot_landscapes_on_grid.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/create_landscapes_on_grid.dir/build.make utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/create_landscapes_on_grid.dir/build [ 42%] Built target compute_distance_of_landscapes make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/create_landscapes_on_grid.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/compute_distance_of_landscapes_on_grid.dir/build.make utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/compute_distance_of_landscapes_on_grid.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/compute_distance_of_landscapes_on_grid.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/compute_scalar_product_of_landscapes_on_grid.dir/build.make utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/compute_scalar_product_of_landscapes_on_grid.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/compute_scalar_product_of_landscapes_on_grid.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/average_landscapes_on_grid.dir/build.make utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/average_landscapes_on_grid.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/average_landscapes_on_grid.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 43%] Built target compute_scalar_product_of_landscapes [ 44%] Built target plot_landscapes_on_grid [ 45%] Built target create_landscapes_on_grid [ 46%] Built target compute_distance_of_landscapes_on_grid make -f utilities/Persistence_representations/persistence_vectors/CMakeFiles/plot_persistence_vectors.dir/build.make utilities/Persistence_representations/persistence_vectors/CMakeFiles/plot_persistence_vectors.dir/depend [ 47%] Built target compute_scalar_product_of_landscapes_on_grid make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_vectors /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_vectors /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_vectors/CMakeFiles/plot_persistence_vectors.dir/DependInfo.cmake --color= make -f utilities/Persistence_representations/persistence_vectors/CMakeFiles/create_persistence_vectors.dir/build.make utilities/Persistence_representations/persistence_vectors/CMakeFiles/create_persistence_vectors.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_vectors /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_vectors /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_vectors/CMakeFiles/create_persistence_vectors.dir/DependInfo.cmake --color= make -f utilities/Persistence_representations/persistence_vectors/CMakeFiles/average_persistence_vectors.dir/build.make utilities/Persistence_representations/persistence_vectors/CMakeFiles/average_persistence_vectors.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_vectors /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_vectors /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_vectors/CMakeFiles/average_persistence_vectors.dir/DependInfo.cmake --color= make -f utilities/Persistence_representations/persistence_vectors/CMakeFiles/compute_distance_of_persistence_vectors.dir/build.make utilities/Persistence_representations/persistence_vectors/CMakeFiles/compute_distance_of_persistence_vectors.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_vectors /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_vectors /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_vectors/CMakeFiles/compute_distance_of_persistence_vectors.dir/DependInfo.cmake --color= make -f utilities/Persistence_representations/persistence_vectors/CMakeFiles/compute_scalar_product_of_persistence_vectors.dir/build.make utilities/Persistence_representations/persistence_vectors/CMakeFiles/compute_scalar_product_of_persistence_vectors.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_vectors /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_vectors /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_vectors/CMakeFiles/compute_scalar_product_of_persistence_vectors.dir/DependInfo.cmake --color= make -f example/Persistent_cohomology/CMakeFiles/custom_persistence_sort.dir/build.make example/Persistent_cohomology/CMakeFiles/custom_persistence_sort.dir/depend [ 48%] Built target average_landscapes_on_grid make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Persistent_cohomology /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology/CMakeFiles/custom_persistence_sort.dir/DependInfo.cmake --color= make -f example/Persistent_cohomology/CMakeFiles/persistence_from_simple_simplex_tree.dir/build.make example/Persistent_cohomology/CMakeFiles/persistence_from_simple_simplex_tree.dir/depend make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Persistent_cohomology /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology/CMakeFiles/persistence_from_simple_simplex_tree.dir/DependInfo.cmake --color= make -f utilities/Persistence_representations/persistence_vectors/CMakeFiles/compute_scalar_product_of_persistence_vectors.dir/build.make utilities/Persistence_representations/persistence_vectors/CMakeFiles/compute_scalar_product_of_persistence_vectors.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_vectors/CMakeFiles/compute_scalar_product_of_persistence_vectors.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_vectors/CMakeFiles/plot_persistence_vectors.dir/build.make utilities/Persistence_representations/persistence_vectors/CMakeFiles/plot_persistence_vectors.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_vectors/CMakeFiles/plot_persistence_vectors.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Persistent_cohomology/CMakeFiles/persistence_from_simple_simplex_tree.dir/build.make example/Persistent_cohomology/CMakeFiles/persistence_from_simple_simplex_tree.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Persistent_cohomology/CMakeFiles/persistence_from_simple_simplex_tree.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_vectors/CMakeFiles/create_persistence_vectors.dir/build.make utilities/Persistence_representations/persistence_vectors/CMakeFiles/create_persistence_vectors.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_vectors/CMakeFiles/create_persistence_vectors.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_vectors/CMakeFiles/average_persistence_vectors.dir/build.make utilities/Persistence_representations/persistence_vectors/CMakeFiles/average_persistence_vectors.dir/build [ 50%] Built target compute_scalar_product_of_persistence_vectors make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_vectors/CMakeFiles/average_persistence_vectors.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_vectors/CMakeFiles/compute_distance_of_persistence_vectors.dir/build.make utilities/Persistence_representations/persistence_vectors/CMakeFiles/compute_distance_of_persistence_vectors.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_vectors/CMakeFiles/compute_distance_of_persistence_vectors.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Persistent_cohomology/CMakeFiles/custom_persistence_sort.dir/build.make example/Persistent_cohomology/CMakeFiles/custom_persistence_sort.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Persistent_cohomology/CMakeFiles/custom_persistence_sort.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 51%] Built target plot_persistence_vectors [ 52%] Built target persistence_from_simple_simplex_tree [ 52%] Built target create_persistence_vectors [ 53%] Built target average_persistence_vectors make -f example/Persistent_cohomology/CMakeFiles/rips_persistence_step_by_step.dir/build.make example/Persistent_cohomology/CMakeFiles/rips_persistence_step_by_step.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Persistent_cohomology /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology/CMakeFiles/rips_persistence_step_by_step.dir/DependInfo.cmake --color= [ 53%] Built target compute_distance_of_persistence_vectors make -f example/Persistent_cohomology/CMakeFiles/rips_multifield_persistence.dir/build.make example/Persistent_cohomology/CMakeFiles/rips_multifield_persistence.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Persistent_cohomology /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology/CMakeFiles/rips_multifield_persistence.dir/DependInfo.cmake --color= [ 54%] Built target custom_persistence_sort make -f example/Persistent_cohomology/CMakeFiles/plain_homology.dir/build.make example/Persistent_cohomology/CMakeFiles/plain_homology.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Persistent_cohomology /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology/CMakeFiles/plain_homology.dir/DependInfo.cmake --color= make -f example/Persistent_cohomology/CMakeFiles/rips_persistence_via_boundary_matrix.dir/build.make example/Persistent_cohomology/CMakeFiles/rips_persistence_via_boundary_matrix.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Persistent_cohomology /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology/CMakeFiles/rips_persistence_via_boundary_matrix.dir/DependInfo.cmake --color= make -f example/Persistent_cohomology/CMakeFiles/persistence_from_file.dir/build.make example/Persistent_cohomology/CMakeFiles/persistence_from_file.dir/depend make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Persistent_cohomology /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology/CMakeFiles/persistence_from_file.dir/DependInfo.cmake --color= make -f example/Persistent_cohomology/CMakeFiles/rips_persistence_step_by_step.dir/build.make example/Persistent_cohomology/CMakeFiles/rips_persistence_step_by_step.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Persistent_cohomology/CMakeFiles/rips_persistence_step_by_step.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Persistent_cohomology/CMakeFiles/rips_multifield_persistence.dir/build.make example/Persistent_cohomology/CMakeFiles/rips_multifield_persistence.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Persistent_cohomology/CMakeFiles/rips_multifield_persistence.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Persistent_cohomology/CMakeFiles/plain_homology.dir/build.make example/Persistent_cohomology/CMakeFiles/plain_homology.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Persistent_cohomology/CMakeFiles/plain_homology.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Persistent_cohomology/CMakeFiles/rips_persistence_via_boundary_matrix.dir/build.make example/Persistent_cohomology/CMakeFiles/rips_persistence_via_boundary_matrix.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Persistent_cohomology/CMakeFiles/rips_persistence_via_boundary_matrix.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 55%] Built target rips_persistence_step_by_step make -f example/Persistent_cohomology/CMakeFiles/persistence_from_file.dir/build.make example/Persistent_cohomology/CMakeFiles/persistence_from_file.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Persistent_cohomology/CMakeFiles/persistence_from_file.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 56%] Built target rips_multifield_persistence make -f example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_from_points.dir/build.make example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_from_points.dir/depend [ 57%] Built target plain_homology make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Rips_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Rips_complex /build/gudhi-2.3.0+dfsg/build/example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_from_points.dir/DependInfo.cmake --color= make -f example/Rips_complex/CMakeFiles/Rips_complex_example_sparse.dir/build.make example/Rips_complex/CMakeFiles/Rips_complex_example_sparse.dir/depend [ 58%] Built target rips_persistence_via_boundary_matrix make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Rips_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Rips_complex /build/gudhi-2.3.0+dfsg/build/example/Rips_complex/CMakeFiles/Rips_complex_example_sparse.dir/DependInfo.cmake --color= [ 59%] Built target persistence_from_file make -f example/Rips_complex/CMakeFiles/Rips_complex_example_from_off.dir/build.make example/Rips_complex/CMakeFiles/Rips_complex_example_from_off.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Rips_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Rips_complex /build/gudhi-2.3.0+dfsg/build/example/Rips_complex/CMakeFiles/Rips_complex_example_from_off.dir/DependInfo.cmake --color= make -f example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_from_distance_matrix.dir/build.make example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_from_distance_matrix.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Rips_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Rips_complex /build/gudhi-2.3.0+dfsg/build/example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_from_distance_matrix.dir/DependInfo.cmake --color= make -f example/Rips_complex/CMakeFiles/Rips_complex_example_from_csv_distance_matrix.dir/build.make example/Rips_complex/CMakeFiles/Rips_complex_example_from_csv_distance_matrix.dir/depend make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_from_points.dir/build.make example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_from_points.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Rips_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Rips_complex /build/gudhi-2.3.0+dfsg/build/example/Rips_complex/CMakeFiles/Rips_complex_example_from_csv_distance_matrix.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_from_points.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Rips_complex/CMakeFiles/Rips_complex_example_sparse.dir/build.make example/Rips_complex/CMakeFiles/Rips_complex_example_sparse.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Rips_complex/CMakeFiles/Rips_complex_example_sparse.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_from_distance_matrix.dir/build.make example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_from_distance_matrix.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_from_distance_matrix.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Rips_complex/CMakeFiles/Rips_complex_example_from_off.dir/build.make example/Rips_complex/CMakeFiles/Rips_complex_example_from_off.dir/build [ 60%] Built target Rips_complex_example_one_skeleton_from_points make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Rips_complex/CMakeFiles/Rips_complex_example_from_off.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Rips_complex/CMakeFiles/Rips_complex_example_from_csv_distance_matrix.dir/build.make example/Rips_complex/CMakeFiles/Rips_complex_example_from_csv_distance_matrix.dir/build [ 61%] Built target Rips_complex_example_sparse make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Rips_complex/CMakeFiles/Rips_complex_example_from_csv_distance_matrix.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 62%] Built target Rips_complex_example_one_skeleton_from_distance_matrix [ 63%] Built target Rips_complex_example_from_off make -f example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_rips_from_correlation_matrix.dir/build.make example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_rips_from_correlation_matrix.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Rips_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Rips_complex /build/gudhi-2.3.0+dfsg/build/example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_rips_from_correlation_matrix.dir/DependInfo.cmake --color= make -f utilities/Rips_complex/CMakeFiles/rips_distance_matrix_persistence.dir/build.make utilities/Rips_complex/CMakeFiles/rips_distance_matrix_persistence.dir/depend [ 64%] Built target Rips_complex_example_from_csv_distance_matrix make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Rips_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Rips_complex /build/gudhi-2.3.0+dfsg/build/utilities/Rips_complex/CMakeFiles/rips_distance_matrix_persistence.dir/DependInfo.cmake --color= make -f utilities/Rips_complex/CMakeFiles/sparse_rips_persistence.dir/build.make utilities/Rips_complex/CMakeFiles/sparse_rips_persistence.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Rips_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Rips_complex /build/gudhi-2.3.0+dfsg/build/utilities/Rips_complex/CMakeFiles/sparse_rips_persistence.dir/DependInfo.cmake --color= make -f utilities/Rips_complex/CMakeFiles/rips_persistence.dir/build.make utilities/Rips_complex/CMakeFiles/rips_persistence.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Rips_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Rips_complex /build/gudhi-2.3.0+dfsg/build/utilities/Rips_complex/CMakeFiles/rips_persistence.dir/DependInfo.cmake --color= make -f utilities/Rips_complex/CMakeFiles/rips_correlation_matrix_persistence.dir/build.make utilities/Rips_complex/CMakeFiles/rips_correlation_matrix_persistence.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Rips_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Rips_complex /build/gudhi-2.3.0+dfsg/build/utilities/Rips_complex/CMakeFiles/rips_correlation_matrix_persistence.dir/DependInfo.cmake --color= make -f example/Simplex_tree/CMakeFiles/Simplex_tree_example_from_cliques_of_graph.dir/build.make example/Simplex_tree/CMakeFiles/Simplex_tree_example_from_cliques_of_graph.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Simplex_tree /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree/CMakeFiles/Simplex_tree_example_from_cliques_of_graph.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Rips_complex/CMakeFiles/sparse_rips_persistence.dir/build.make utilities/Rips_complex/CMakeFiles/sparse_rips_persistence.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Rips_complex/CMakeFiles/sparse_rips_persistence.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_rips_from_correlation_matrix.dir/build.make example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_rips_from_correlation_matrix.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_rips_from_correlation_matrix.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Rips_complex/CMakeFiles/rips_distance_matrix_persistence.dir/build.make utilities/Rips_complex/CMakeFiles/rips_distance_matrix_persistence.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Rips_complex/CMakeFiles/rips_distance_matrix_persistence.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Rips_complex/CMakeFiles/rips_persistence.dir/build.make utilities/Rips_complex/CMakeFiles/rips_persistence.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Rips_complex/CMakeFiles/rips_persistence.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Rips_complex/CMakeFiles/rips_correlation_matrix_persistence.dir/build.make utilities/Rips_complex/CMakeFiles/rips_correlation_matrix_persistence.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Rips_complex/CMakeFiles/rips_correlation_matrix_persistence.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Simplex_tree/CMakeFiles/Simplex_tree_example_from_cliques_of_graph.dir/build.make example/Simplex_tree/CMakeFiles/Simplex_tree_example_from_cliques_of_graph.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Simplex_tree/CMakeFiles/Simplex_tree_example_from_cliques_of_graph.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 65%] Built target sparse_rips_persistence [ 66%] Built target Rips_complex_example_one_skeleton_rips_from_correlation_matrix [ 67%] Built target rips_distance_matrix_persistence [ 68%] Built target rips_persistence make -f example/Simplex_tree/CMakeFiles/Simplex_tree_example_simple_simplex_tree.dir/build.make example/Simplex_tree/CMakeFiles/Simplex_tree_example_simple_simplex_tree.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Simplex_tree /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree/CMakeFiles/Simplex_tree_example_simple_simplex_tree.dir/DependInfo.cmake --color= [ 69%] Built target rips_correlation_matrix_persistence make -f example/Simplex_tree/CMakeFiles/Simplex_tree_example_mini_simplex_tree.dir/build.make example/Simplex_tree/CMakeFiles/Simplex_tree_example_mini_simplex_tree.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Simplex_tree /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree/CMakeFiles/Simplex_tree_example_mini_simplex_tree.dir/DependInfo.cmake --color= make -f example/Simplex_tree/CMakeFiles/Simplex_tree_example_graph_expansion_with_blocker.dir/build.make example/Simplex_tree/CMakeFiles/Simplex_tree_example_graph_expansion_with_blocker.dir/depend [ 70%] Built target Simplex_tree_example_from_cliques_of_graph make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Simplex_tree /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree/CMakeFiles/Simplex_tree_example_graph_expansion_with_blocker.dir/DependInfo.cmake --color= make -f example/Simplex_tree/CMakeFiles/Simplex_tree_example_alpha_shapes_3_from_off.dir/build.make example/Simplex_tree/CMakeFiles/Simplex_tree_example_alpha_shapes_3_from_off.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Simplex_tree /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree/CMakeFiles/Simplex_tree_example_alpha_shapes_3_from_off.dir/DependInfo.cmake --color= make -f example/Simplex_tree/CMakeFiles/Simplex_tree_example_cech_complex_cgal_mini_sphere_3d.dir/build.make example/Simplex_tree/CMakeFiles/Simplex_tree_example_cech_complex_cgal_mini_sphere_3d.dir/depend make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Simplex_tree /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree/CMakeFiles/Simplex_tree_example_cech_complex_cgal_mini_sphere_3d.dir/DependInfo.cmake --color= make -f example/Simplex_tree/CMakeFiles/Simplex_tree_example_simple_simplex_tree.dir/build.make example/Simplex_tree/CMakeFiles/Simplex_tree_example_simple_simplex_tree.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Simplex_tree/CMakeFiles/Simplex_tree_example_simple_simplex_tree.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Simplex_tree/CMakeFiles/Simplex_tree_example_mini_simplex_tree.dir/build.make example/Simplex_tree/CMakeFiles/Simplex_tree_example_mini_simplex_tree.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Simplex_tree/CMakeFiles/Simplex_tree_example_mini_simplex_tree.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Simplex_tree/CMakeFiles/Simplex_tree_example_graph_expansion_with_blocker.dir/build.make example/Simplex_tree/CMakeFiles/Simplex_tree_example_graph_expansion_with_blocker.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Simplex_tree/CMakeFiles/Simplex_tree_example_graph_expansion_with_blocker.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Simplex_tree/CMakeFiles/Simplex_tree_example_alpha_shapes_3_from_off.dir/build.make example/Simplex_tree/CMakeFiles/Simplex_tree_example_alpha_shapes_3_from_off.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Simplex_tree/CMakeFiles/Simplex_tree_example_alpha_shapes_3_from_off.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Simplex_tree/CMakeFiles/Simplex_tree_example_cech_complex_cgal_mini_sphere_3d.dir/build.make example/Simplex_tree/CMakeFiles/Simplex_tree_example_cech_complex_cgal_mini_sphere_3d.dir/build [ 71%] Built target Simplex_tree_example_simple_simplex_tree make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Simplex_tree/CMakeFiles/Simplex_tree_example_cech_complex_cgal_mini_sphere_3d.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 72%] Built target Simplex_tree_example_mini_simplex_tree [ 72%] Built target Simplex_tree_example_graph_expansion_with_blocker make -f example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_from_simplices.dir/build.make example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_from_simplices.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Skeleton_blocker /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Skeleton_blocker /build/gudhi-2.3.0+dfsg/build/example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_from_simplices.dir/DependInfo.cmake --color= make -f example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_iteration.dir/build.make example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_iteration.dir/depend [ 73%] Built target Simplex_tree_example_alpha_shapes_3_from_off make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Skeleton_blocker /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Skeleton_blocker /build/gudhi-2.3.0+dfsg/build/example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_iteration.dir/DependInfo.cmake --color= make -f example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_link.dir/build.make example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_link.dir/depend [ 74%] Built target Simplex_tree_example_cech_complex_cgal_mini_sphere_3d make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Skeleton_blocker /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Skeleton_blocker /build/gudhi-2.3.0+dfsg/build/example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_link.dir/DependInfo.cmake --color= make -f example/Spatial_searching/CMakeFiles/Spatial_searching_example_spatial_searching.dir/build.make example/Spatial_searching/CMakeFiles/Spatial_searching_example_spatial_searching.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Spatial_searching /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Spatial_searching /build/gudhi-2.3.0+dfsg/build/example/Spatial_searching/CMakeFiles/Spatial_searching_example_spatial_searching.dir/DependInfo.cmake --color= make -f example/Subsampling/CMakeFiles/Subsampling_example_choose_n_farthest_points.dir/build.make example/Subsampling/CMakeFiles/Subsampling_example_choose_n_farthest_points.dir/depend make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Subsampling /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Subsampling /build/gudhi-2.3.0+dfsg/build/example/Subsampling/CMakeFiles/Subsampling_example_choose_n_farthest_points.dir/DependInfo.cmake --color= make -f example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_from_simplices.dir/build.make example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_from_simplices.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_from_simplices.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_link.dir/build.make example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_link.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_link.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_iteration.dir/build.make example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_iteration.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_iteration.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Spatial_searching/CMakeFiles/Spatial_searching_example_spatial_searching.dir/build.make example/Spatial_searching/CMakeFiles/Spatial_searching_example_spatial_searching.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Spatial_searching/CMakeFiles/Spatial_searching_example_spatial_searching.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Subsampling/CMakeFiles/Subsampling_example_choose_n_farthest_points.dir/build.make example/Subsampling/CMakeFiles/Subsampling_example_choose_n_farthest_points.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Subsampling/CMakeFiles/Subsampling_example_choose_n_farthest_points.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 75%] Built target Skeleton_blocker_example_from_simplices [ 76%] Built target Skeleton_blocker_example_link make -f example/Subsampling/CMakeFiles/Subsampling_example_pick_n_random_points.dir/build.make example/Subsampling/CMakeFiles/Subsampling_example_pick_n_random_points.dir/depend [ 77%] Built target Skeleton_blocker_example_iteration make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Subsampling /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Subsampling /build/gudhi-2.3.0+dfsg/build/example/Subsampling/CMakeFiles/Subsampling_example_pick_n_random_points.dir/DependInfo.cmake --color= make -f example/Subsampling/CMakeFiles/Subsampling_example_custom_kernel.dir/build.make example/Subsampling/CMakeFiles/Subsampling_example_custom_kernel.dir/depend [ 78%] Built target Spatial_searching_example_spatial_searching [ 79%] Built target Subsampling_example_choose_n_farthest_points make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Subsampling /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Subsampling /build/gudhi-2.3.0+dfsg/build/example/Subsampling/CMakeFiles/Subsampling_example_custom_kernel.dir/DependInfo.cmake --color= make -f example/Subsampling/CMakeFiles/Subsampling_example_sparsify_point_set.dir/build.make example/Subsampling/CMakeFiles/Subsampling_example_sparsify_point_set.dir/depend make -f example/Tangential_complex/CMakeFiles/Tangential_complex_example_basic.dir/build.make example/Tangential_complex/CMakeFiles/Tangential_complex_example_basic.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Subsampling /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Subsampling /build/gudhi-2.3.0+dfsg/build/example/Subsampling/CMakeFiles/Subsampling_example_sparsify_point_set.dir/DependInfo.cmake --color= make -f example/Tangential_complex/CMakeFiles/Tangential_complex_example_with_perturb.dir/build.make example/Tangential_complex/CMakeFiles/Tangential_complex_example_with_perturb.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Tangential_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Tangential_complex /build/gudhi-2.3.0+dfsg/build/example/Tangential_complex/CMakeFiles/Tangential_complex_example_basic.dir/DependInfo.cmake --color= make -f example/Witness_complex/CMakeFiles/Witness_complex_example_off.dir/build.make example/Witness_complex/CMakeFiles/Witness_complex_example_off.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Tangential_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Tangential_complex /build/gudhi-2.3.0+dfsg/build/example/Tangential_complex/CMakeFiles/Tangential_complex_example_with_perturb.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Witness_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Witness_complex /build/gudhi-2.3.0+dfsg/build/example/Witness_complex/CMakeFiles/Witness_complex_example_off.dir/DependInfo.cmake --color= make -f example/Witness_complex/CMakeFiles/Witness_complex_example_nearest_landmark_table.dir/build.make example/Witness_complex/CMakeFiles/Witness_complex_example_nearest_landmark_table.dir/depend make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Witness_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Witness_complex /build/gudhi-2.3.0+dfsg/build/example/Witness_complex/CMakeFiles/Witness_complex_example_nearest_landmark_table.dir/DependInfo.cmake --color= make -f example/Subsampling/CMakeFiles/Subsampling_example_pick_n_random_points.dir/build.make example/Subsampling/CMakeFiles/Subsampling_example_pick_n_random_points.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Subsampling/CMakeFiles/Subsampling_example_pick_n_random_points.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Subsampling/CMakeFiles/Subsampling_example_custom_kernel.dir/build.make example/Subsampling/CMakeFiles/Subsampling_example_custom_kernel.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Subsampling/CMakeFiles/Subsampling_example_sparsify_point_set.dir/build.make example/Subsampling/CMakeFiles/Subsampling_example_sparsify_point_set.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Subsampling/CMakeFiles/Subsampling_example_custom_kernel.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Subsampling/CMakeFiles/Subsampling_example_sparsify_point_set.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Tangential_complex/CMakeFiles/Tangential_complex_example_basic.dir/build.make example/Tangential_complex/CMakeFiles/Tangential_complex_example_basic.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Tangential_complex/CMakeFiles/Tangential_complex_example_with_perturb.dir/build.make example/Tangential_complex/CMakeFiles/Tangential_complex_example_with_perturb.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Tangential_complex/CMakeFiles/Tangential_complex_example_basic.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Witness_complex/CMakeFiles/Witness_complex_example_off.dir/build.make example/Witness_complex/CMakeFiles/Witness_complex_example_off.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Tangential_complex/CMakeFiles/Tangential_complex_example_with_perturb.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Witness_complex/CMakeFiles/Witness_complex_example_off.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Witness_complex/CMakeFiles/Witness_complex_example_nearest_landmark_table.dir/build.make example/Witness_complex/CMakeFiles/Witness_complex_example_nearest_landmark_table.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Witness_complex/CMakeFiles/Witness_complex_example_nearest_landmark_table.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 80%] Built target Subsampling_example_pick_n_random_points [ 81%] Built target Subsampling_example_custom_kernel [ 82%] Built target Subsampling_example_sparsify_point_set [ 83%] Built target Tangential_complex_example_basic make -f example/Witness_complex/CMakeFiles/Witness_complex_example_sphere.dir/build.make example/Witness_complex/CMakeFiles/Witness_complex_example_sphere.dir/depend [ 83%] Built target Tangential_complex_example_with_perturb make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Witness_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Witness_complex /build/gudhi-2.3.0+dfsg/build/example/Witness_complex/CMakeFiles/Witness_complex_example_sphere.dir/DependInfo.cmake --color= make -f example/Witness_complex/CMakeFiles/Witness_complex_example_strong_off.dir/build.make example/Witness_complex/CMakeFiles/Witness_complex_example_strong_off.dir/depend [ 84%] Built target Witness_complex_example_off make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Witness_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Witness_complex /build/gudhi-2.3.0+dfsg/build/example/Witness_complex/CMakeFiles/Witness_complex_example_strong_off.dir/DependInfo.cmake --color= make -f utilities/Witness_complex/CMakeFiles/Witness_complex_weak_witness_persistence.dir/build.make utilities/Witness_complex/CMakeFiles/Witness_complex_weak_witness_persistence.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Witness_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Witness_complex /build/gudhi-2.3.0+dfsg/build/utilities/Witness_complex/CMakeFiles/Witness_complex_weak_witness_persistence.dir/DependInfo.cmake --color= make -f utilities/Witness_complex/CMakeFiles/Witness_complex_strong_witness_persistence.dir/build.make utilities/Witness_complex/CMakeFiles/Witness_complex_strong_witness_persistence.dir/depend [ 85%] Built target Witness_complex_example_nearest_landmark_table make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Witness_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Witness_complex /build/gudhi-2.3.0+dfsg/build/utilities/Witness_complex/CMakeFiles/Witness_complex_strong_witness_persistence.dir/DependInfo.cmake --color= make -f example/Nerve_GIC/CMakeFiles/FuncGIC.dir/build.make example/Nerve_GIC/CMakeFiles/FuncGIC.dir/depend make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Nerve_GIC /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Nerve_GIC /build/gudhi-2.3.0+dfsg/build/example/Nerve_GIC/CMakeFiles/FuncGIC.dir/DependInfo.cmake --color= make -f example/Witness_complex/CMakeFiles/Witness_complex_example_sphere.dir/build.make example/Witness_complex/CMakeFiles/Witness_complex_example_sphere.dir/build make -f example/Witness_complex/CMakeFiles/Witness_complex_example_strong_off.dir/build.make example/Witness_complex/CMakeFiles/Witness_complex_example_strong_off.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Witness_complex/CMakeFiles/Witness_complex_example_sphere.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Witness_complex/CMakeFiles/Witness_complex_example_strong_off.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Witness_complex/CMakeFiles/Witness_complex_weak_witness_persistence.dir/build.make utilities/Witness_complex/CMakeFiles/Witness_complex_weak_witness_persistence.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Witness_complex/CMakeFiles/Witness_complex_weak_witness_persistence.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Witness_complex/CMakeFiles/Witness_complex_strong_witness_persistence.dir/build.make utilities/Witness_complex/CMakeFiles/Witness_complex_strong_witness_persistence.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Witness_complex/CMakeFiles/Witness_complex_strong_witness_persistence.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Nerve_GIC/CMakeFiles/FuncGIC.dir/build.make example/Nerve_GIC/CMakeFiles/FuncGIC.dir/build [ 86%] Built target Witness_complex_example_sphere make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Nerve_GIC/CMakeFiles/FuncGIC.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 87%] Built target Witness_complex_example_strong_off make -f example/Nerve_GIC/CMakeFiles/CoordGIC.dir/build.make example/Nerve_GIC/CMakeFiles/CoordGIC.dir/depend [ 88%] Built target Witness_complex_weak_witness_persistence make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Nerve_GIC /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Nerve_GIC /build/gudhi-2.3.0+dfsg/build/example/Nerve_GIC/CMakeFiles/CoordGIC.dir/DependInfo.cmake --color= [ 89%] Built target Witness_complex_strong_witness_persistence make -f utilities/Nerve_GIC/CMakeFiles/VoronoiGIC.dir/build.make utilities/Nerve_GIC/CMakeFiles/VoronoiGIC.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Nerve_GIC /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Nerve_GIC /build/gudhi-2.3.0+dfsg/build/utilities/Nerve_GIC/CMakeFiles/VoronoiGIC.dir/DependInfo.cmake --color= make -f utilities/Nerve_GIC/CMakeFiles/Nerve.dir/build.make utilities/Nerve_GIC/CMakeFiles/Nerve.dir/depend [ 90%] Built target FuncGIC make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Nerve_GIC /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Nerve_GIC /build/gudhi-2.3.0+dfsg/build/utilities/Nerve_GIC/CMakeFiles/Nerve.dir/DependInfo.cmake --color= make -f GudhUI/CMakeFiles/GudhUI_autogen.dir/build.make GudhUI/CMakeFiles/GudhUI_autogen.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/GudhUI /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/GudhUI /build/gudhi-2.3.0+dfsg/build/GudhUI/CMakeFiles/GudhUI_autogen.dir/DependInfo.cmake --color= make -f cython/CMakeFiles/cython.dir/build.make cython/CMakeFiles/cython.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/cython /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/cython /build/gudhi-2.3.0+dfsg/build/cython/CMakeFiles/cython.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Nerve_GIC/CMakeFiles/CoordGIC.dir/build.make example/Nerve_GIC/CMakeFiles/CoordGIC.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Nerve_GIC/CMakeFiles/CoordGIC.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Nerve_GIC/CMakeFiles/VoronoiGIC.dir/build.make utilities/Nerve_GIC/CMakeFiles/VoronoiGIC.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Nerve_GIC/CMakeFiles/VoronoiGIC.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Nerve_GIC/CMakeFiles/Nerve.dir/build.make utilities/Nerve_GIC/CMakeFiles/Nerve.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Nerve_GIC/CMakeFiles/Nerve.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f GudhUI/CMakeFiles/GudhUI_autogen.dir/build.make GudhUI/CMakeFiles/GudhUI_autogen.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make -f cython/CMakeFiles/cython.dir/build.make cython/CMakeFiles/cython.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 90%] Automatic MOC and UIC for target GudhUI cd /build/gudhi-2.3.0+dfsg/build/GudhUI && /usr/bin/cmake -E cmake_autogen /build/gudhi-2.3.0+dfsg/build/GudhUI/CMakeFiles/GudhUI_autogen.dir/AutogenInfo.cmake None [ 91%] Built target CoordGIC [ 91%] Generating gudhi.so cd /build/gudhi-2.3.0+dfsg/build/cython && /usr/bin/python3.7 /build/gudhi-2.3.0+dfsg/build/cython/setup.py build_ext --inplace [ 92%] Built target VoronoiGIC [ 93%] Built target Nerve AutoMoc warning --------------- "/build/gudhi-2.3.0+dfsg/GudhUI/gui/MainWindow.cpp" The file includes the moc file "MainWindow.moc", but does not contain a Q_OBJECT, Q_GADGET or Q_NAMESPACE macro. AutoMoc warning --------------- "/build/gudhi-2.3.0+dfsg/GudhUI/gui/Menu_persistence.cpp" The file includes the moc file "Menu_persistence.moc", but does not contain a Q_OBJECT, Q_GADGET or Q_NAMESPACE macro. AutoMoc warning --------------- "/build/gudhi-2.3.0+dfsg/GudhUI/gui/Menu_edge_contraction.cpp" The file includes the moc file "Menu_edge_contraction.moc", but does not contain a Q_OBJECT, Q_GADGET or Q_NAMESPACE macro. AutoMoc warning --------------- "/build/gudhi-2.3.0+dfsg/GudhUI/gui/Menu_k_nearest_neighbors.cpp" The file includes the moc file "Menu_k_nearest_neighbors.moc", but does not contain a Q_OBJECT, Q_GADGET or Q_NAMESPACE macro. AutoMoc warning --------------- "/build/gudhi-2.3.0+dfsg/GudhUI/gui/Menu_uniform_neighbors.cpp" The file includes the moc file "Menu_uniform_neighbors.moc", but does not contain a Q_OBJECT, Q_GADGET or Q_NAMESPACE macro. AutoMoc warning --------------- "/build/gudhi-2.3.0+dfsg/GudhUI/view/Viewer_instructor.cpp" The file includes the moc file "Viewer_instructor.moc", but does not contain a Q_OBJECT, Q_GADGET or Q_NAMESPACE macro. AutoMoc warning --------------- "/build/gudhi-2.3.0+dfsg/GudhUI/view/Viewer.cpp" The file includes the moc file "Viewer.moc", but does not contain a Q_OBJECT, Q_GADGET or Q_NAMESPACE macro. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 93%] Built target GudhUI_autogen make -f GudhUI/CMakeFiles/GudhUI.dir/build.make GudhUI/CMakeFiles/GudhUI.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/GudhUI /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/GudhUI /build/gudhi-2.3.0+dfsg/build/GudhUI/CMakeFiles/GudhUI.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f GudhUI/CMakeFiles/GudhUI.dir/build.make GudhUI/CMakeFiles/GudhUI.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'GudhUI/CMakeFiles/GudhUI.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 98%] Built target GudhUI running build_ext /usr/lib/python3.7/distutils/dist.py:274: UserWarning: Unknown distribution option: 'install_requires' warnings.warn(msg) [100%] Do not forget to add /build/gudhi-2.3.0+dfsg/build/cython/ to your PYTHONPATH before using examples or tests make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [100%] Built target cython make[3]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' /usr/bin/cmake -E cmake_progress_start /build/gudhi-2.3.0+dfsg/build/CMakeFiles 0 make[2]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[1]: Leaving directory '/build/gudhi-2.3.0+dfsg' debian/rules override_dh_auto_test-arch make[1]: Entering directory '/build/gudhi-2.3.0+dfsg' dh_auto_test --no-parallel --builddirectory=build cd build && make -j1 test ARGS\+=-j1 make[2]: Entering directory '/build/gudhi-2.3.0+dfsg/build' Running tests... /usr/bin/ctest --force-new-ctest-process -j1 Test project /build/gudhi-2.3.0+dfsg/build Start 1: Common_example_vector_double_off_reader 1/133 Test #1: Common_example_vector_double_off_reader ..................................................... Passed 0.00 sec Start 2: Common_example_vector_double_off_reader_diff_files 2/133 Test #2: Common_example_vector_double_off_reader_diff_files .......................................... Passed 0.00 sec Start 3: Common_example_vector_cgal_3D_off_reader 3/133 Test #3: Common_example_vector_cgal_3D_off_reader .................................................... Passed 0.01 sec Start 4: Common_example_vector_cgal_off_reader 4/133 Test #4: Common_example_vector_cgal_off_reader ....................................................... Passed 0.00 sec Start 5: off_file_from_shape_generator_on_sphere_1000_3_15.2 5/133 Test #5: off_file_from_shape_generator_on_sphere_1000_3_15.2 ......................................... Passed 0.01 sec Start 6: off_file_from_shape_generator_in_sphere_100_2 6/133 Test #6: off_file_from_shape_generator_in_sphere_100_2 ............................................... Passed 0.01 sec Start 7: off_file_from_shape_generator_in_cube_10000_3_5.8 7/133 Test #7: off_file_from_shape_generator_in_cube_10000_3_5.8 ........................................... Passed 0.11 sec Start 8: Alpha_complex_example_from_points 8/133 Test #8: Alpha_complex_example_from_points ........................................................... Passed 0.02 sec Start 9: Alpha_complex_example_from_off_60 9/133 Test #9: Alpha_complex_example_from_off_60 ........................................................... Passed 0.02 sec Start 10: Alpha_complex_example_from_off_32 10/133 Test #10: Alpha_complex_example_from_off_32 ........................................................... Passed 0.02 sec Start 11: Alpha_complex_example_from_off_60_diff_files 11/133 Test #11: Alpha_complex_example_from_off_60_diff_files ................................................ Passed 0.02 sec Start 12: Alpha_complex_example_from_off_32_diff_files 12/133 Test #12: Alpha_complex_example_from_off_32_diff_files ................................................ Passed 0.01 sec Start 13: Alpha_complex_utilities_alpha_complex_3d_persistence 13/133 Test #13: Alpha_complex_utilities_alpha_complex_3d_persistence ........................................ Passed 0.11 sec Start 14: Alpha_complex_utilities_exact_alpha_complex_3d 14/133 Test #14: Alpha_complex_utilities_exact_alpha_complex_3d .............................................. Passed 1.07 sec Start 15: Alpha_complex_utilities_weighted_alpha_complex_3d 15/133 Test #15: Alpha_complex_utilities_weighted_alpha_complex_3d ........................................... Passed 0.18 sec Start 16: Alpha_complex_utilities_alpha_complex_persistence 16/133 Test #16: Alpha_complex_utilities_alpha_complex_persistence ........................................... Passed 0.36 sec Start 17: Alpha_complex_utilities_periodic_alpha_complex_3d_persistence 17/133 Test #17: Alpha_complex_utilities_periodic_alpha_complex_3d_persistence ............................... Passed 2.08 sec Start 18: Alpha_complex_utilities_weigted_periodic_alpha_complex_3d 18/133 Test #18: Alpha_complex_utilities_weigted_periodic_alpha_complex_3d ................................... Passed 3.29 sec Start 19: Bitmap_cubical_complex_example_random 19/133 Test #19: Bitmap_cubical_complex_example_random ....................................................... Passed 0.16 sec Start 20: Bitmap_cubical_complex_utility_persistence_one_sphere 20/133 Test #20: Bitmap_cubical_complex_utility_persistence_one_sphere ....................................... Passed 0.01 sec Start 21: Bitmap_cubical_complex_utility_persistence_two_sphere 21/133 Test #21: Bitmap_cubical_complex_utility_persistence_two_sphere ....................................... Passed 0.02 sec Start 22: Bitmap_cubical_complex_utility_periodic_boundary_conditions_2d_torus 22/133 Test #22: Bitmap_cubical_complex_utility_periodic_boundary_conditions_2d_torus ........................ Passed 0.02 sec Start 23: Bitmap_cubical_complex_utility_periodic_boundary_conditions_3d_torus 23/133 Test #23: Bitmap_cubical_complex_utility_periodic_boundary_conditions_3d_torus ........................ Passed 0.02 sec Start 24: Bottleneck_distance_example_basic 24/133 Test #24: Bottleneck_distance_example_basic ........................................................... Passed 0.02 sec Start 25: Bottleneck_distance_example_alpha_rips_persistence_bottleneck 25/133 Test #25: Bottleneck_distance_example_alpha_rips_persistence_bottleneck ............................... Passed 4.47 sec Start 26: Bottleneck_distance_utilities_Bottleneck_read_file 26/133 Test #26: Bottleneck_distance_utilities_Bottleneck_read_file .......................................... Passed 0.02 sec Start 27: Cech_complex_utility_from_rips_on_tore_3D 27/133 Test #27: Cech_complex_utility_from_rips_on_tore_3D ................................................... Passed 0.10 sec Start 28: Cech_complex_example_from_points 28/133 Test #28: Cech_complex_example_from_points ............................................................ Passed 0.02 sec Start 29: Cech_complex_utility_from_rips_on_tore_3D 29/133 Test #29: Cech_complex_utility_from_rips_on_tore_3D ................................................... Passed 0.04 sec Start 30: Contraction_example_tore3D_0.2 30/133 Test #30: Contraction_example_tore3D_0.2 .............................................................. Passed 1.70 sec Start 31: Persistence_representations_example_landscape_on_grid 31/133 Test #31: Persistence_representations_example_landscape_on_grid ....................................... Passed 0.00 sec Start 32: Persistence_representations_example_landscape 32/133 Test #32: Persistence_representations_example_landscape ............................................... Passed 0.00 sec Start 33: Persistence_representations_example_intervals 33/133 Test #33: Persistence_representations_example_intervals ............................................... Passed 0.00 sec Start 34: Persistence_representations_example_vectors 34/133 Test #34: Persistence_representations_example_vectors ................................................. Passed 0.00 sec Start 35: Persistence_representations_example_heat_maps 35/133 Test #35: Persistence_representations_example_heat_maps ............................................... Passed 0.00 sec Start 36: Persistence_representation_utilities_create_pssk 36/133 Test #36: Persistence_representation_utilities_create_pssk ............................................ Passed 0.00 sec Start 37: Persistence_representation_utilities_create_p_h_m_weighted_by_arctan_of_their_persistence 37/133 Test #37: Persistence_representation_utilities_create_p_h_m_weighted_by_arctan_of_their_persistence ... Passed 0.00 sec Start 38: Persistence_representation_utilities_create_p_h_m_weighted_by_distance_from_diagonal 38/133 Test #38: Persistence_representation_utilities_create_p_h_m_weighted_by_distance_from_diagonal ........ Passed 0.00 sec Start 39: Persistence_representation_utilities_create_p_h_m_weighted_by_squared_diag_distance 39/133 Test #39: Persistence_representation_utilities_create_p_h_m_weighted_by_squared_diag_distance ......... Passed 0.00 sec Start 40: Persistence_representation_utilities_create_persistence_heat_maps 40/133 Test #40: Persistence_representation_utilities_create_persistence_heat_maps ........................... Passed 0.00 sec Start 41: Persistence_representation_utilities_plot_persistence_heat_map_first 41/133 Test #41: Persistence_representation_utilities_plot_persistence_heat_map_first ........................ Passed 0.01 sec Start 42: Persistence_representation_utilities_average_persistence_heat_maps 42/133 Test #42: Persistence_representation_utilities_average_persistence_heat_maps .......................... Passed 0.00 sec Start 43: Persistence_representation_utilities_compute_distance_of_persistence_heat_maps 43/133 Test #43: Persistence_representation_utilities_compute_distance_of_persistence_heat_maps .............. Passed 0.00 sec Start 44: Persistence_representation_utilities_compute_scalar_product_of_persistence_heat_maps 44/133 Test #44: Persistence_representation_utilities_compute_scalar_product_of_persistence_heat_maps ........ Passed 0.01 sec Start 45: plot_histogram_of_intervals_lengths 45/133 Test #45: plot_histogram_of_intervals_lengths ......................................................... Passed 0.00 sec Start 46: Persistence_representation_utilities_plot_persistence_intervals_first 46/133 Test #46: Persistence_representation_utilities_plot_persistence_intervals_first ....................... Passed 0.01 sec Start 47: Persistence_representation_utilities_plot_persistence_Betti_numbers_first 47/133 Test #47: Persistence_representation_utilities_plot_persistence_Betti_numbers_first ................... Passed 0.00 sec Start 48: Persistence_representation_utilities_compute_birth_death_range_in_persistence_diagram 48/133 Test #48: Persistence_representation_utilities_compute_birth_death_range_in_persistence_diagram ....... Passed 0.00 sec Start 49: Persistence_representation_utilities_compute_number_of_dominant_intervals 49/133 Test #49: Persistence_representation_utilities_compute_number_of_dominant_intervals ................... Passed 0.00 sec Start 50: Persistence_representation_utilities_compute_bottleneck_distance 50/133 Test #50: Persistence_representation_utilities_compute_bottleneck_distance ............................ Passed 0.01 sec Start 51: Persistence_representation_utilities_create_landscapes 51/133 Test #51: Persistence_representation_utilities_create_landscapes ...................................... Passed 0.00 sec Start 52: Persistence_representation_utilities_plot_landscapes_first 52/133 Test #52: Persistence_representation_utilities_plot_landscapes_first .................................. Passed 0.00 sec Start 53: Persistence_representation_utilities_average_landscapes 53/133 Test #53: Persistence_representation_utilities_average_landscapes ..................................... Passed 0.01 sec Start 54: Persistence_representation_utilities_compute_distance_of_landscapes 54/133 Test #54: Persistence_representation_utilities_compute_distance_of_landscapes ......................... Passed 0.01 sec Start 55: Persistence_representation_utilities_compute_scalar_product_of_landscapes 55/133 Test #55: Persistence_representation_utilities_compute_scalar_product_of_landscapes ................... Passed 0.01 sec Start 56: Persistence_representation_utilities_create_landscapes_on_grid 56/133 Test #56: Persistence_representation_utilities_create_landscapes_on_grid .............................. Passed 0.01 sec Start 57: Persistence_representation_utilities_plot_landscapes_on_grid_first 57/133 Test #57: Persistence_representation_utilities_plot_landscapes_on_grid_first .......................... Passed 0.00 sec Start 58: Persistence_representation_utilities_average_landscapes_on_grid 58/133 Test #58: Persistence_representation_utilities_average_landscapes_on_grid ............................. Passed 0.00 sec Start 59: Persistence_representation_utilities_compute_distance_of_landscapes_on_grid 59/133 Test #59: Persistence_representation_utilities_compute_distance_of_landscapes_on_grid ................. Passed 0.00 sec Start 60: Persistence_representation_utilities_compute_scalar_product_of_landscapes_on_grid 60/133 Test #60: Persistence_representation_utilities_compute_scalar_product_of_landscapes_on_grid ........... Passed 0.00 sec Start 61: Persistence_representation_utilities_create_persistence_vectors 61/133 Test #61: Persistence_representation_utilities_create_persistence_vectors ............................. Passed 0.00 sec Start 62: Persistence_representation_utilities_plot_persistence_vectors_first 62/133 Test #62: Persistence_representation_utilities_plot_persistence_vectors_first ......................... Passed 0.00 sec Start 63: Persistence_representation_utilities_average_persistence_vectors 63/133 Test #63: Persistence_representation_utilities_average_persistence_vectors ............................ Passed 0.00 sec Start 64: Persistence_representation_utilities_compute_distance_of_persistence_vectors 64/133 Test #64: Persistence_representation_utilities_compute_distance_of_persistence_vectors ................ Passed 0.00 sec Start 65: Persistence_representation_utilities_compute_scalar_product_of_persistence_vectors 65/133 Test #65: Persistence_representation_utilities_compute_scalar_product_of_persistence_vectors .......... Passed 0.00 sec Start 66: Persistent_cohomology_example_plain_homology 66/133 Test #66: Persistent_cohomology_example_plain_homology ................................................ Passed 0.00 sec Start 67: Persistent_cohomology_example_from_simple_simplex_tree 67/133 Test #67: Persistent_cohomology_example_from_simple_simplex_tree ...................................... Passed 0.01 sec Start 68: Persistent_cohomology_example_from_rips_step_by_step_on_tore_3D 68/133 Test #68: Persistent_cohomology_example_from_rips_step_by_step_on_tore_3D ............................. Passed 0.43 sec Start 69: Persistent_cohomology_example_via_boundary_matrix 69/133 Test #69: Persistent_cohomology_example_via_boundary_matrix ........................................... Passed 6.25 sec Start 70: Persistent_cohomology_example_multifield_2_71 70/133 Test #70: Persistent_cohomology_example_multifield_2_71 ............................................... Passed 0.68 sec Start 71: Persistent_cohomology_example_custom_persistence_sort 71/133 Test #71: Persistent_cohomology_example_custom_persistence_sort ....................................... Passed 2.17 sec Start 72: Rips_complex_example_one_skeleton_from_points 72/133 Test #72: Rips_complex_example_one_skeleton_from_points ............................................... Passed 0.02 sec Start 73: Rips_complex_example_one_skeleton_from_distance_matrix 73/133 Test #73: Rips_complex_example_one_skeleton_from_distance_matrix ...................................... Passed 0.01 sec Start 74: Rips_complex_example_sparse 74/133 Test #74: Rips_complex_example_sparse ................................................................. Passed 0.00 sec Start 75: Rips_complex_example_one_skeleton_rips_from_correlation_matrix 75/133 Test #75: Rips_complex_example_one_skeleton_rips_from_correlation_matrix .............................. Passed 0.00 sec Start 76: Rips_complex_example_from_off_doc_12_1 76/133 Test #76: Rips_complex_example_from_off_doc_12_1 ...................................................... Passed 0.01 sec Start 77: Rips_complex_example_from_off_doc_12_3 77/133 Test #77: Rips_complex_example_from_off_doc_12_3 ...................................................... Passed 0.02 sec Start 78: Rips_complex_example_from_csv_distance_matrix_doc_12_1 78/133 Test #78: Rips_complex_example_from_csv_distance_matrix_doc_12_1 ...................................... Passed 0.02 sec Start 79: Rips_complex_example_from_csv_distance_matrix_doc_12_3 79/133 Test #79: Rips_complex_example_from_csv_distance_matrix_doc_12_3 ...................................... Passed 0.02 sec Start 80: Rips_complex_example_from_off_doc_12_1_diff_files 80/133 Test #80: Rips_complex_example_from_off_doc_12_1_diff_files ........................................... Passed 0.02 sec Start 81: Rips_complex_example_from_off_doc_12_3_diff_files 81/133 Test #81: Rips_complex_example_from_off_doc_12_3_diff_files ........................................... Passed 0.02 sec Start 82: Rips_complex_example_from_csv_distance_matrix_doc_12_1_diff_files 82/133 Test #82: Rips_complex_example_from_csv_distance_matrix_doc_12_1_diff_files ........................... Passed 0.02 sec Start 83: Rips_complex_example_from_csv_distance_matrix_doc_12_3_diff_files 83/133 Test #83: Rips_complex_example_from_csv_distance_matrix_doc_12_3_diff_files ........................... Passed 0.02 sec Start 84: Rips_complex_utility_from_rips_distance_matrix 84/133 Test #84: Rips_complex_utility_from_rips_distance_matrix .............................................. Passed 0.02 sec Start 85: Rips_complex_utility_from_rips_on_tore_3D 85/133 Test #85: Rips_complex_utility_from_rips_on_tore_3D ................................................... Passed 0.48 sec Start 86: Rips_complex_utility_from_rips_correlation_matrix 86/133 Test #86: Rips_complex_utility_from_rips_correlation_matrix ........................................... Passed 0.02 sec Start 87: Sparse_rips_complex_utility_on_tore_3D 87/133 Test #87: Sparse_rips_complex_utility_on_tore_3D ...................................................... Passed 1.78 sec Start 88: Simplex_tree_example_from_cliques_of_graph_2 88/133 Test #88: Simplex_tree_example_from_cliques_of_graph_2 ................................................ Passed 0.02 sec Start 89: Simplex_tree_example_from_cliques_of_graph_3 89/133 Test #89: Simplex_tree_example_from_cliques_of_graph_3 ................................................ Passed 0.02 sec Start 90: Simplex_tree_example_simple_simplex_tree 90/133 Test #90: Simplex_tree_example_simple_simplex_tree .................................................... Passed 0.02 sec Start 91: Simplex_tree_example_mini_simplex_tree 91/133 Test #91: Simplex_tree_example_mini_simplex_tree ...................................................... Passed 0.02 sec Start 92: Simplex_tree_example_cech_complex_cgal_mini_sphere_3d 92/133 Test #92: Simplex_tree_example_cech_complex_cgal_mini_sphere_3d ....................................... Passed 0.14 sec Start 93: Simplex_tree_example_graph_expansion_with_blocker 93/133 Test #93: Simplex_tree_example_graph_expansion_with_blocker ........................................... Passed 0.02 sec Start 94: Skeleton_blocker_example_from_simplices 94/133 Test #94: Skeleton_blocker_example_from_simplices ..................................................... Passed 0.01 sec Start 95: Skeleton_blocker_example_iteration 95/133 Test #95: Skeleton_blocker_example_iteration .......................................................... Passed 0.19 sec Start 96: Skeleton_blocker_example_link 96/133 Test #96: Skeleton_blocker_example_link ............................................................... Passed 0.02 sec Start 97: Spatial_searching_example_spatial_searching 97/133 Test #97: Spatial_searching_example_spatial_searching ................................................. Passed 0.02 sec Start 98: Subsampling_example_pick_n_random_points 98/133 Test #98: Subsampling_example_pick_n_random_points .................................................... Passed 0.01 sec Start 99: Subsampling_example_choose_n_farthest_points 99/133 Test #99: Subsampling_example_choose_n_farthest_points ................................................ Passed 0.02 sec Start 100: Subsampling_example_sparsify_point_set 100/133 Test #100: Subsampling_example_sparsify_point_set ...................................................... Passed 0.02 sec Start 101: Tangential_complex_example_basic 101/133 Test #101: Tangential_complex_example_basic ............................................................ Passed 0.80 sec Start 102: Tangential_complex_example_with_perturb 102/133 Test #102: Tangential_complex_example_with_perturb ..................................................... Passed 0.26 sec Start 103: Witness_complex_example_nearest_landmark_table 103/133 Test #103: Witness_complex_example_nearest_landmark_table .............................................. Passed 0.03 sec Start 104: Witness_complex_example_off_test_torus 104/133 Test #104: Witness_complex_example_off_test_torus ...................................................... Passed 0.33 sec Start 105: Witness_complex_example_test_sphere_10 105/133 Test #105: Witness_complex_example_test_sphere_10 ...................................................... Passed 2.00 sec Start 106: Witness_complex_example_strong_off_test_torus 106/133 Test #106: Witness_complex_example_strong_off_test_torus ............................................... Passed 0.19 sec Start 107: Witness_complex_strong_test_torus_persistence 107/133 Test #107: Witness_complex_strong_test_torus_persistence ............................................... Passed 0.05 sec Start 108: Witness_complex_weak_test_torus_persistence 108/133 Test #108: Witness_complex_weak_test_torus_persistence ................................................. Passed 0.18 sec Start 109: Nerve_GIC_example_CoordGIC 109/133 Test #109: Nerve_GIC_example_CoordGIC .................................................................. Passed 2.66 sec Start 110: alpha_rips_persistence_bottleneck_distance_py_test 110/133 Test #110: alpha_rips_persistence_bottleneck_distance_py_test .......................................... Passed 2.35 sec Start 111: tangential_complex_plain_homology_from_off_file_example_py_test 111/133 Test #111: tangential_complex_plain_homology_from_off_file_example_py_test ............................. Passed 2.07 sec Start 112: test_tangential_complex_py_test 112/133 Test #112: test_tangential_complex_py_test ............................................................. Passed 2.18 sec Start 113: euclidean_strong_witness_complex_diagram_persistence_from_off_file_example_py_test 113/133 Test #113: euclidean_strong_witness_complex_diagram_persistence_from_off_file_example_py_test .......... Passed 1.03 sec Start 114: euclidean_witness_complex_diagram_persistence_from_off_file_example_py_test 114/133 Test #114: euclidean_witness_complex_diagram_persistence_from_off_file_example_py_test ................. Passed 0.86 sec Start 115: test_subsampling_py_test 115/133 Test #115: test_subsampling_py_test .................................................................... Passed 1.14 sec Start 116: bottleneck_basic_example_py_test 116/133 Test #116: bottleneck_basic_example_py_test ............................................................ Passed 0.92 sec Start 117: test_bottleneck_distance_py_test 117/133 Test #117: test_bottleneck_distance_py_test ............................................................ Passed 3.17 sec Start 118: alpha_complex_from_points_example_py_test 118/133 Test #118: alpha_complex_from_points_example_py_test ................................................... Passed 1.72 sec Start 119: alpha_complex_diagram_persistence_from_off_file_example_py_test 119/133 Test #119: alpha_complex_diagram_persistence_from_off_file_example_py_test ............................. Passed 2.11 sec Start 120: test_alpha_complex_py_test 120/133 Test #120: test_alpha_complex_py_test .................................................................. Passed 2.40 sec Start 121: test_euclidean_witness_complex_py_test 121/133 Test #121: test_euclidean_witness_complex_py_test ...................................................... Passed 2.62 sec Start 122: periodic_cubical_complex_barcode_persistence_from_perseus_file_example_py_test 122/133 Test #122: periodic_cubical_complex_barcode_persistence_from_perseus_file_example_py_test .............. Passed 1.82 sec Start 123: random_cubical_complex_persistence_example_py_test 123/133 Test #123: random_cubical_complex_persistence_example_py_test .......................................... Passed 1.61 sec Start 124: test_cubical_complex_py_test 124/133 Test #124: test_cubical_complex_py_test ................................................................ Passed 2.29 sec Start 125: rips_complex_diagram_persistence_from_distance_matrix_file_example_py_test 125/133 Test #125: rips_complex_diagram_persistence_from_distance_matrix_file_example_py_test .................. Passed 1.70 sec Start 126: rips_complex_diagram_persistence_from_off_file_example_py_test 126/133 Test #126: rips_complex_diagram_persistence_from_off_file_example_py_test .............................. Passed 1.68 sec Start 127: rips_complex_from_points_example_py_test 127/133 Test #127: rips_complex_from_points_example_py_test .................................................... Passed 1.76 sec Start 128: test_rips_complex_py_test 128/133 Test #128: test_rips_complex_py_test ................................................................... Passed 2.53 sec Start 129: simplex_tree_example_py_test 129/133 Test #129: simplex_tree_example_py_test ................................................................ Passed 1.77 sec Start 130: test_simplex_tree_py_test 130/133 Test #130: test_simplex_tree_py_test ................................................................... Passed 2.55 sec Start 131: witness_complex_from_nearest_landmark_table_py_test 131/133 Test #131: witness_complex_from_nearest_landmark_table_py_test ......................................... Passed 2.03 sec Start 132: test_witness_complex_py_test 132/133 Test #132: test_witness_complex_py_test ................................................................ Passed 2.38 sec Start 133: test_reader_utils_py_test 133/133 Test #133: test_reader_utils_py_test ................................................................... Passed 2.34 sec 100% tests passed, 0 tests failed out of 133 Total Test time (real) = 80.16 sec make[2]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' for py3ver in ; do \ dh_auto_test --no-parallel --builddirectory=build$py3ver ; \ done make[1]: Leaving directory '/build/gudhi-2.3.0+dfsg' create-stamp debian/debhelper-build-stamp for py3ver in ; do \ dh build --with=python3 --builddirectory=build$py3ver ; \ done fakeroot debian/rules binary dh binary --with=python3 --builddirectory=build dh_testroot -O--builddirectory=build dh_prep -O--builddirectory=build debian/rules override_dh_auto_install make[1]: Entering directory '/build/gudhi-2.3.0+dfsg' find example -type f \( -name '*.cpp' -o \( -name '*.txt' -a ! -iname 'cmake*' \) \) -exec sh -c 'install -D -m 644 $0 debian/tmp/usr/share/doc/libgudhi-examples/$0' {} \; dh_auto_install --builddirectory=build cd build && make -j18 install DESTDIR=/build/gudhi-2.3.0\+dfsg/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[2]: Entering directory '/build/gudhi-2.3.0+dfsg/build' /usr/bin/cmake -S/build/gudhi-2.3.0+dfsg -B/build/gudhi-2.3.0+dfsg/build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/gudhi-2.3.0+dfsg/build/CMakeFiles /build/gudhi-2.3.0+dfsg/build/CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[3]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make -f example/common/CMakeFiles/cgal_3D_off_reader.dir/build.make example/common/CMakeFiles/cgal_3D_off_reader.dir/depend make -f example/common/CMakeFiles/vector_double_off_reader.dir/build.make example/common/CMakeFiles/vector_double_off_reader.dir/depend make -f example/common/CMakeFiles/cgal_off_reader.dir/build.make example/common/CMakeFiles/cgal_off_reader.dir/depend make -f utilities/common/CMakeFiles/off_file_from_shape_generator.dir/build.make utilities/common/CMakeFiles/off_file_from_shape_generator.dir/depend make -f example/Alpha_complex/CMakeFiles/Alpha_complex_example_from_off.dir/build.make example/Alpha_complex/CMakeFiles/Alpha_complex_example_from_off.dir/depend make -f example/Alpha_complex/CMakeFiles/Alpha_complex_example_from_points.dir/build.make example/Alpha_complex/CMakeFiles/Alpha_complex_example_from_points.dir/depend make -f utilities/Alpha_complex/CMakeFiles/exact_alpha_complex_3d_persistence.dir/build.make utilities/Alpha_complex/CMakeFiles/exact_alpha_complex_3d_persistence.dir/depend make -f utilities/Alpha_complex/CMakeFiles/alpha_complex_3d_persistence.dir/build.make utilities/Alpha_complex/CMakeFiles/alpha_complex_3d_persistence.dir/depend make -f utilities/Alpha_complex/CMakeFiles/weighted_alpha_complex_3d_persistence.dir/build.make utilities/Alpha_complex/CMakeFiles/weighted_alpha_complex_3d_persistence.dir/depend make -f utilities/Alpha_complex/CMakeFiles/alpha_complex_persistence.dir/build.make utilities/Alpha_complex/CMakeFiles/alpha_complex_persistence.dir/depend make -f utilities/Alpha_complex/CMakeFiles/periodic_alpha_complex_3d_persistence.dir/build.make utilities/Alpha_complex/CMakeFiles/periodic_alpha_complex_3d_persistence.dir/depend make -f utilities/Alpha_complex/CMakeFiles/weighted_periodic_alpha_complex_3d_persistence.dir/build.make utilities/Alpha_complex/CMakeFiles/weighted_periodic_alpha_complex_3d_persistence.dir/depend make -f example/Bitmap_cubical_complex/CMakeFiles/Random_bitmap_cubical_complex.dir/build.make example/Bitmap_cubical_complex/CMakeFiles/Random_bitmap_cubical_complex.dir/depend make -f utilities/Bitmap_cubical_complex/CMakeFiles/periodic_cubical_complex_persistence.dir/build.make utilities/Bitmap_cubical_complex/CMakeFiles/periodic_cubical_complex_persistence.dir/depend make -f utilities/Bitmap_cubical_complex/CMakeFiles/cubical_complex_persistence.dir/build.make utilities/Bitmap_cubical_complex/CMakeFiles/cubical_complex_persistence.dir/depend make -f example/Bottleneck_distance/CMakeFiles/alpha_rips_persistence_bottleneck_distance.dir/build.make example/Bottleneck_distance/CMakeFiles/alpha_rips_persistence_bottleneck_distance.dir/depend make -f example/Bottleneck_distance/CMakeFiles/bottleneck_basic_example.dir/build.make example/Bottleneck_distance/CMakeFiles/bottleneck_basic_example.dir/depend make -f utilities/Bottleneck_distance/CMakeFiles/bottleneck_distance.dir/build.make utilities/Bottleneck_distance/CMakeFiles/bottleneck_distance.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/common /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/common /build/gudhi-2.3.0+dfsg/build/example/common/CMakeFiles/cgal_3D_off_reader.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/common /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/common /build/gudhi-2.3.0+dfsg/build/example/common/CMakeFiles/vector_double_off_reader.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/common /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/common /build/gudhi-2.3.0+dfsg/build/example/common/CMakeFiles/cgal_off_reader.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/common /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/common /build/gudhi-2.3.0+dfsg/build/utilities/common/CMakeFiles/off_file_from_shape_generator.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Alpha_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Alpha_complex /build/gudhi-2.3.0+dfsg/build/example/Alpha_complex/CMakeFiles/Alpha_complex_example_from_off.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Alpha_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Alpha_complex /build/gudhi-2.3.0+dfsg/build/example/Alpha_complex/CMakeFiles/Alpha_complex_example_from_points.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Alpha_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Alpha_complex /build/gudhi-2.3.0+dfsg/build/utilities/Alpha_complex/CMakeFiles/exact_alpha_complex_3d_persistence.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Alpha_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Alpha_complex /build/gudhi-2.3.0+dfsg/build/utilities/Alpha_complex/CMakeFiles/alpha_complex_3d_persistence.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Alpha_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Alpha_complex /build/gudhi-2.3.0+dfsg/build/utilities/Alpha_complex/CMakeFiles/weighted_alpha_complex_3d_persistence.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Alpha_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Alpha_complex /build/gudhi-2.3.0+dfsg/build/utilities/Alpha_complex/CMakeFiles/alpha_complex_persistence.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Alpha_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Alpha_complex /build/gudhi-2.3.0+dfsg/build/utilities/Alpha_complex/CMakeFiles/periodic_alpha_complex_3d_persistence.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Alpha_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Alpha_complex /build/gudhi-2.3.0+dfsg/build/utilities/Alpha_complex/CMakeFiles/weighted_periodic_alpha_complex_3d_persistence.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Bitmap_cubical_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Bitmap_cubical_complex /build/gudhi-2.3.0+dfsg/build/example/Bitmap_cubical_complex/CMakeFiles/Random_bitmap_cubical_complex.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Bitmap_cubical_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Bitmap_cubical_complex /build/gudhi-2.3.0+dfsg/build/utilities/Bitmap_cubical_complex/CMakeFiles/periodic_cubical_complex_persistence.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Bitmap_cubical_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Bitmap_cubical_complex /build/gudhi-2.3.0+dfsg/build/utilities/Bitmap_cubical_complex/CMakeFiles/cubical_complex_persistence.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Bottleneck_distance /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Bottleneck_distance /build/gudhi-2.3.0+dfsg/build/example/Bottleneck_distance/CMakeFiles/alpha_rips_persistence_bottleneck_distance.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Bottleneck_distance /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Bottleneck_distance /build/gudhi-2.3.0+dfsg/build/example/Bottleneck_distance/CMakeFiles/bottleneck_basic_example.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Bottleneck_distance /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Bottleneck_distance /build/gudhi-2.3.0+dfsg/build/utilities/Bottleneck_distance/CMakeFiles/bottleneck_distance.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/common/CMakeFiles/off_file_from_shape_generator.dir/build.make utilities/common/CMakeFiles/off_file_from_shape_generator.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/common/CMakeFiles/vector_double_off_reader.dir/build.make example/common/CMakeFiles/vector_double_off_reader.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/common/CMakeFiles/cgal_3D_off_reader.dir/build.make example/common/CMakeFiles/cgal_3D_off_reader.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/common/CMakeFiles/cgal_off_reader.dir/build.make example/common/CMakeFiles/cgal_off_reader.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Bottleneck_distance/CMakeFiles/bottleneck_basic_example.dir/build.make example/Bottleneck_distance/CMakeFiles/bottleneck_basic_example.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Bottleneck_distance/CMakeFiles/bottleneck_distance.dir/build.make utilities/Bottleneck_distance/CMakeFiles/bottleneck_distance.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Alpha_complex/CMakeFiles/Alpha_complex_example_from_points.dir/build.make example/Alpha_complex/CMakeFiles/Alpha_complex_example_from_points.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Alpha_complex/CMakeFiles/Alpha_complex_example_from_off.dir/build.make example/Alpha_complex/CMakeFiles/Alpha_complex_example_from_off.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Bitmap_cubical_complex/CMakeFiles/Random_bitmap_cubical_complex.dir/build.make example/Bitmap_cubical_complex/CMakeFiles/Random_bitmap_cubical_complex.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Bitmap_cubical_complex/CMakeFiles/cubical_complex_persistence.dir/build.make utilities/Bitmap_cubical_complex/CMakeFiles/cubical_complex_persistence.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Bitmap_cubical_complex/CMakeFiles/periodic_cubical_complex_persistence.dir/build.make utilities/Bitmap_cubical_complex/CMakeFiles/periodic_cubical_complex_persistence.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Alpha_complex/CMakeFiles/alpha_complex_persistence.dir/build.make utilities/Alpha_complex/CMakeFiles/alpha_complex_persistence.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Alpha_complex/CMakeFiles/exact_alpha_complex_3d_persistence.dir/build.make utilities/Alpha_complex/CMakeFiles/exact_alpha_complex_3d_persistence.dir/build make -f utilities/Alpha_complex/CMakeFiles/alpha_complex_3d_persistence.dir/build.make utilities/Alpha_complex/CMakeFiles/alpha_complex_3d_persistence.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Alpha_complex/CMakeFiles/weighted_alpha_complex_3d_persistence.dir/build.make utilities/Alpha_complex/CMakeFiles/weighted_alpha_complex_3d_persistence.dir/build make -f utilities/Alpha_complex/CMakeFiles/periodic_alpha_complex_3d_persistence.dir/build.make utilities/Alpha_complex/CMakeFiles/periodic_alpha_complex_3d_persistence.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Alpha_complex/CMakeFiles/weighted_periodic_alpha_complex_3d_persistence.dir/build.make utilities/Alpha_complex/CMakeFiles/weighted_periodic_alpha_complex_3d_persistence.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/common/CMakeFiles/off_file_from_shape_generator.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/common/CMakeFiles/vector_double_off_reader.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/common/CMakeFiles/cgal_3D_off_reader.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Bottleneck_distance/CMakeFiles/alpha_rips_persistence_bottleneck_distance.dir/build.make example/Bottleneck_distance/CMakeFiles/alpha_rips_persistence_bottleneck_distance.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/common/CMakeFiles/cgal_off_reader.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 1%] Built target off_file_from_shape_generator make -f example/Cech_complex/CMakeFiles/Cech_complex_example_step_by_step.dir/build.make example/Cech_complex/CMakeFiles/Cech_complex_example_step_by_step.dir/depend [ 2%] Built target vector_double_off_reader make -f example/Cech_complex/CMakeFiles/Cech_complex_example_from_points.dir/build.make example/Cech_complex/CMakeFiles/Cech_complex_example_from_points.dir/depend [ 3%] Built target cgal_3D_off_reader make -f utilities/Cech_complex/CMakeFiles/cech_persistence.dir/build.make utilities/Cech_complex/CMakeFiles/cech_persistence.dir/depend [ 4%] Built target cgal_off_reader make -f example/Contraction/CMakeFiles/GarlandHeckbert.dir/build.make example/Contraction/CMakeFiles/GarlandHeckbert.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Bottleneck_distance/CMakeFiles/bottleneck_basic_example.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Cech_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Cech_complex /build/gudhi-2.3.0+dfsg/build/example/Cech_complex/CMakeFiles/Cech_complex_example_step_by_step.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Cech_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Cech_complex /build/gudhi-2.3.0+dfsg/build/example/Cech_complex/CMakeFiles/Cech_complex_example_from_points.dir/DependInfo.cmake --color= [ 5%] Built target bottleneck_basic_example make -f example/Contraction/CMakeFiles/RipsContraction.dir/build.make example/Contraction/CMakeFiles/RipsContraction.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Cech_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Cech_complex /build/gudhi-2.3.0+dfsg/build/utilities/Cech_complex/CMakeFiles/cech_persistence.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Contraction /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Contraction /build/gudhi-2.3.0+dfsg/build/example/Contraction/CMakeFiles/GarlandHeckbert.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Bottleneck_distance/CMakeFiles/bottleneck_distance.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 6%] Built target bottleneck_distance make -f example/Persistence_representations/CMakeFiles/Persistence_representations_example_landscape.dir/build.make example/Persistence_representations/CMakeFiles/Persistence_representations_example_landscape.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Contraction /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Contraction /build/gudhi-2.3.0+dfsg/build/example/Contraction/CMakeFiles/RipsContraction.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Alpha_complex/CMakeFiles/Alpha_complex_example_from_points.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Alpha_complex/CMakeFiles/Alpha_complex_example_from_off.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Bitmap_cubical_complex/CMakeFiles/Random_bitmap_cubical_complex.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Bitmap_cubical_complex/CMakeFiles/cubical_complex_persistence.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Bitmap_cubical_complex/CMakeFiles/periodic_cubical_complex_persistence.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 7%] Built target Alpha_complex_example_from_points make -f example/Persistence_representations/CMakeFiles/Persistence_representations_example_landscape_on_grid.dir/build.make example/Persistence_representations/CMakeFiles/Persistence_representations_example_landscape_on_grid.dir/depend [ 7%] Built target Alpha_complex_example_from_off make -f example/Persistence_representations/CMakeFiles/Persistence_representations_example_intervals.dir/build.make example/Persistence_representations/CMakeFiles/Persistence_representations_example_intervals.dir/depend [ 8%] Built target Random_bitmap_cubical_complex make -f example/Persistence_representations/CMakeFiles/Persistence_representations_example_vectors.dir/build.make example/Persistence_representations/CMakeFiles/Persistence_representations_example_vectors.dir/depend [ 9%] Built target cubical_complex_persistence make -f example/Persistence_representations/CMakeFiles/Persistence_representations_example_heat_maps.dir/build.make example/Persistence_representations/CMakeFiles/Persistence_representations_example_heat_maps.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Persistence_representations /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Persistence_representations /build/gudhi-2.3.0+dfsg/build/example/Persistence_representations/CMakeFiles/Persistence_representations_example_landscape.dir/DependInfo.cmake --color= [ 10%] Built target periodic_cubical_complex_persistence make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/compute_distance_of_persistence_heat_maps.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/compute_distance_of_persistence_heat_maps.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Alpha_complex/CMakeFiles/weighted_periodic_alpha_complex_3d_persistence.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Alpha_complex/CMakeFiles/alpha_complex_persistence.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Alpha_complex/CMakeFiles/exact_alpha_complex_3d_persistence.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Alpha_complex/CMakeFiles/alpha_complex_3d_persistence.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Alpha_complex/CMakeFiles/weighted_alpha_complex_3d_persistence.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Alpha_complex/CMakeFiles/periodic_alpha_complex_3d_persistence.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Cech_complex/CMakeFiles/Cech_complex_example_step_by_step.dir/build.make example/Cech_complex/CMakeFiles/Cech_complex_example_step_by_step.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Persistence_representations /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Persistence_representations /build/gudhi-2.3.0+dfsg/build/example/Persistence_representations/CMakeFiles/Persistence_representations_example_landscape_on_grid.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Cech_complex/CMakeFiles/Cech_complex_example_from_points.dir/build.make example/Cech_complex/CMakeFiles/Cech_complex_example_from_points.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Persistence_representations /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Persistence_representations /build/gudhi-2.3.0+dfsg/build/example/Persistence_representations/CMakeFiles/Persistence_representations_example_intervals.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Persistence_representations /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Persistence_representations /build/gudhi-2.3.0+dfsg/build/example/Persistence_representations/CMakeFiles/Persistence_representations_example_vectors.dir/DependInfo.cmake --color= [ 11%] Built target weighted_periodic_alpha_complex_3d_persistence make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_arctan_of_their_persistence.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_arctan_of_their_persistence.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Persistence_representations /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Persistence_representations /build/gudhi-2.3.0+dfsg/build/example/Persistence_representations/CMakeFiles/Persistence_representations_example_heat_maps.dir/DependInfo.cmake --color= [ 12%] Built target alpha_complex_persistence make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_pssk.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_pssk.dir/depend [ 12%] Built target exact_alpha_complex_3d_persistence make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/average_persistence_heat_maps.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/average_persistence_heat_maps.dir/depend [ 13%] Built target alpha_complex_3d_persistence make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_distance_from_diagonal.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_distance_from_diagonal.dir/depend [ 14%] Built target weighted_alpha_complex_3d_persistence make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_squared_diag_distance.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_squared_diag_distance.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/compute_distance_of_persistence_heat_maps.dir/DependInfo.cmake --color= [ 15%] Built target periodic_alpha_complex_3d_persistence make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/compute_scalar_product_of_persistence_heat_maps.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/compute_scalar_product_of_persistence_heat_maps.dir/depend make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Cech_complex/CMakeFiles/cech_persistence.dir/build.make utilities/Cech_complex/CMakeFiles/cech_persistence.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_arctan_of_their_persistence.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_pssk.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Persistence_representations/CMakeFiles/Persistence_representations_example_landscape.dir/build.make example/Persistence_representations/CMakeFiles/Persistence_representations_example_landscape.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/average_persistence_heat_maps.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_distance_from_diagonal.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_squared_diag_distance.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/compute_scalar_product_of_persistence_heat_maps.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Bottleneck_distance/CMakeFiles/alpha_rips_persistence_bottleneck_distance.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Persistence_representations/CMakeFiles/Persistence_representations_example_landscape_on_grid.dir/build.make example/Persistence_representations/CMakeFiles/Persistence_representations_example_landscape_on_grid.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Persistence_representations/CMakeFiles/Persistence_representations_example_intervals.dir/build.make example/Persistence_representations/CMakeFiles/Persistence_representations_example_intervals.dir/build [ 16%] Built target alpha_rips_persistence_bottleneck_distance make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_persistence_heat_maps.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_persistence_heat_maps.dir/depend make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Persistence_representations/CMakeFiles/Persistence_representations_example_heat_maps.dir/build.make example/Persistence_representations/CMakeFiles/Persistence_representations_example_heat_maps.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/compute_distance_of_persistence_heat_maps.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/compute_distance_of_persistence_heat_maps.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Persistence_representations/CMakeFiles/Persistence_representations_example_vectors.dir/build.make example/Persistence_representations/CMakeFiles/Persistence_representations_example_vectors.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_persistence_heat_maps.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Contraction/CMakeFiles/GarlandHeckbert.dir/build.make example/Contraction/CMakeFiles/GarlandHeckbert.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_arctan_of_their_persistence.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_arctan_of_their_persistence.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/average_persistence_heat_maps.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/average_persistence_heat_maps.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_distance_from_diagonal.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_distance_from_diagonal.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_squared_diag_distance.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_squared_diag_distance.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/compute_scalar_product_of_persistence_heat_maps.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/compute_scalar_product_of_persistence_heat_maps.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_pssk.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_pssk.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Contraction/CMakeFiles/RipsContraction.dir/build.make example/Contraction/CMakeFiles/RipsContraction.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Cech_complex/CMakeFiles/Cech_complex_example_step_by_step.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Cech_complex/CMakeFiles/Cech_complex_example_from_points.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Persistence_representations/CMakeFiles/Persistence_representations_example_landscape.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 17%] Built target Cech_complex_example_step_by_step make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/plot_persistence_heat_map.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/plot_persistence_heat_map.dir/depend [ 18%] Built target Cech_complex_example_from_points make -f utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_persistence_intervals.dir/build.make utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_persistence_intervals.dir/depend [ 19%] Built target Persistence_representations_example_landscape make -f utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_number_of_dominant_intervals.dir/build.make utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_number_of_dominant_intervals.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Persistence_representations/CMakeFiles/Persistence_representations_example_intervals.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Persistence_representations/CMakeFiles/Persistence_representations_example_landscape_on_grid.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Persistence_representations/CMakeFiles/Persistence_representations_example_heat_maps.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/compute_distance_of_persistence_heat_maps.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 20%] Built target Persistence_representations_example_intervals make -f utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_histogram_of_intervals_lengths.dir/build.make utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_histogram_of_intervals_lengths.dir/depend [ 21%] Built target Persistence_representations_example_landscape_on_grid make -f utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_persistence_Betti_numbers.dir/build.make utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_persistence_Betti_numbers.dir/depend make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_persistence_heat_maps.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_persistence_heat_maps.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/plot_persistence_heat_map.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_intervals /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_persistence_intervals.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Persistence_representations/CMakeFiles/Persistence_representations_example_vectors.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 22%] Built target Persistence_representations_example_heat_maps make -f utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_birth_death_range_in_persistence_diagram.dir/build.make utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_birth_death_range_in_persistence_diagram.dir/depend [ 23%] Built target compute_distance_of_persistence_heat_maps make -f utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_bottleneck_distance.dir/build.make utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_bottleneck_distance.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_intervals /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_number_of_dominant_intervals.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Cech_complex/CMakeFiles/cech_persistence.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 23%] Built target Persistence_representations_example_vectors make -f utilities/Persistence_representations/persistence_landscapes/CMakeFiles/plot_landscapes.dir/build.make utilities/Persistence_representations/persistence_landscapes/CMakeFiles/plot_landscapes.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_arctan_of_their_persistence.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/average_persistence_heat_maps.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_distance_from_diagonal.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/compute_scalar_product_of_persistence_heat_maps.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_p_h_m_weighted_by_squared_diag_distance.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_intervals /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_histogram_of_intervals_lengths.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_intervals /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_persistence_Betti_numbers.dir/DependInfo.cmake --color= [ 24%] Built target cech_persistence make -f utilities/Persistence_representations/persistence_landscapes/CMakeFiles/create_landscapes.dir/build.make utilities/Persistence_representations/persistence_landscapes/CMakeFiles/create_landscapes.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_pssk.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_intervals /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_birth_death_range_in_persistence_diagram.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_intervals /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_bottleneck_distance.dir/DependInfo.cmake --color= [ 25%] Built target create_p_h_m_weighted_by_arctan_of_their_persistence make -f utilities/Persistence_representations/persistence_landscapes/CMakeFiles/average_landscapes.dir/build.make utilities/Persistence_representations/persistence_landscapes/CMakeFiles/average_landscapes.dir/depend [ 25%] Built target average_persistence_heat_maps make -f utilities/Persistence_representations/persistence_landscapes/CMakeFiles/compute_distance_of_landscapes.dir/build.make utilities/Persistence_representations/persistence_landscapes/CMakeFiles/compute_distance_of_landscapes.dir/depend [ 26%] Built target create_p_h_m_weighted_by_distance_from_diagonal make -f utilities/Persistence_representations/persistence_landscapes/CMakeFiles/compute_scalar_product_of_landscapes.dir/build.make utilities/Persistence_representations/persistence_landscapes/CMakeFiles/compute_scalar_product_of_landscapes.dir/depend [ 27%] Built target compute_scalar_product_of_persistence_heat_maps make -f utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/plot_landscapes_on_grid.dir/build.make utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/plot_landscapes_on_grid.dir/depend [ 28%] Built target create_p_h_m_weighted_by_squared_diag_distance make -f utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/create_landscapes_on_grid.dir/build.make utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/create_landscapes_on_grid.dir/depend [ 29%] Built target create_pssk make -f utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/compute_distance_of_landscapes_on_grid.dir/build.make utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/compute_distance_of_landscapes_on_grid.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes/CMakeFiles/plot_landscapes.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_persistence_intervals.dir/build.make utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_persistence_intervals.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes/CMakeFiles/create_landscapes.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/plot_persistence_heat_map.dir/build.make utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/plot_persistence_heat_map.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes/CMakeFiles/average_landscapes.dir/DependInfo.cmake --color= make -f utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_number_of_dominant_intervals.dir/build.make utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_number_of_dominant_intervals.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes/CMakeFiles/compute_distance_of_landscapes.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes/CMakeFiles/compute_scalar_product_of_landscapes.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes_on_grid /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes_on_grid /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/plot_landscapes_on_grid.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes_on_grid /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes_on_grid /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/create_landscapes_on_grid.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes_on_grid /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes_on_grid /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/compute_distance_of_landscapes_on_grid.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_histogram_of_intervals_lengths.dir/build.make utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_histogram_of_intervals_lengths.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_persistence_Betti_numbers.dir/build.make utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_persistence_Betti_numbers.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_birth_death_range_in_persistence_diagram.dir/build.make utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_birth_death_range_in_persistence_diagram.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/create_persistence_heat_maps.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_landscapes/CMakeFiles/plot_landscapes.dir/build.make utilities/Persistence_representations/persistence_landscapes/CMakeFiles/plot_landscapes.dir/build [ 30%] Built target create_persistence_heat_maps make -f utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/compute_scalar_product_of_landscapes_on_grid.dir/build.make utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/compute_scalar_product_of_landscapes_on_grid.dir/depend make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_bottleneck_distance.dir/build.make utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_bottleneck_distance.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_landscapes/CMakeFiles/create_landscapes.dir/build.make utilities/Persistence_representations/persistence_landscapes/CMakeFiles/create_landscapes.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_landscapes/CMakeFiles/average_landscapes.dir/build.make utilities/Persistence_representations/persistence_landscapes/CMakeFiles/average_landscapes.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_landscapes/CMakeFiles/compute_distance_of_landscapes.dir/build.make utilities/Persistence_representations/persistence_landscapes/CMakeFiles/compute_distance_of_landscapes.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_landscapes/CMakeFiles/compute_scalar_product_of_landscapes.dir/build.make utilities/Persistence_representations/persistence_landscapes/CMakeFiles/compute_scalar_product_of_landscapes.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/plot_landscapes_on_grid.dir/build.make utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/plot_landscapes_on_grid.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/create_landscapes_on_grid.dir/build.make utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/create_landscapes_on_grid.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/compute_distance_of_landscapes_on_grid.dir/build.make utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/compute_distance_of_landscapes_on_grid.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes_on_grid /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes_on_grid /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/compute_scalar_product_of_landscapes_on_grid.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_persistence_intervals.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_heat_maps/CMakeFiles/plot_persistence_heat_map.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_number_of_dominant_intervals.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Contraction/CMakeFiles/GarlandHeckbert.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 30%] Built target plot_persistence_intervals make -f utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/average_landscapes_on_grid.dir/build.make utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/average_landscapes_on_grid.dir/depend [ 31%] Built target plot_persistence_heat_map make -f utilities/Persistence_representations/persistence_vectors/CMakeFiles/plot_persistence_vectors.dir/build.make utilities/Persistence_representations/persistence_vectors/CMakeFiles/plot_persistence_vectors.dir/depend [ 32%] Built target compute_number_of_dominant_intervals make -f utilities/Persistence_representations/persistence_vectors/CMakeFiles/create_persistence_vectors.dir/build.make utilities/Persistence_representations/persistence_vectors/CMakeFiles/create_persistence_vectors.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_histogram_of_intervals_lengths.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 33%] Built target GarlandHeckbert make -f utilities/Persistence_representations/persistence_vectors/CMakeFiles/average_persistence_vectors.dir/build.make utilities/Persistence_representations/persistence_vectors/CMakeFiles/average_persistence_vectors.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_intervals/CMakeFiles/plot_persistence_Betti_numbers.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Contraction/CMakeFiles/RipsContraction.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_birth_death_range_in_persistence_diagram.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 34%] Built target plot_histogram_of_intervals_lengths make -f utilities/Persistence_representations/persistence_vectors/CMakeFiles/compute_distance_of_persistence_vectors.dir/build.make utilities/Persistence_representations/persistence_vectors/CMakeFiles/compute_distance_of_persistence_vectors.dir/depend [ 35%] Built target plot_persistence_Betti_numbers make -f utilities/Persistence_representations/persistence_vectors/CMakeFiles/compute_scalar_product_of_persistence_vectors.dir/build.make utilities/Persistence_representations/persistence_vectors/CMakeFiles/compute_scalar_product_of_persistence_vectors.dir/depend [ 36%] Built target RipsContraction make -f example/Persistent_cohomology/CMakeFiles/custom_persistence_sort.dir/build.make example/Persistent_cohomology/CMakeFiles/custom_persistence_sort.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_landscapes_on_grid /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes_on_grid /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/average_landscapes_on_grid.dir/DependInfo.cmake --color= [ 37%] Built target compute_birth_death_range_in_persistence_diagram make -f example/Persistent_cohomology/CMakeFiles/persistence_from_simple_simplex_tree.dir/build.make example/Persistent_cohomology/CMakeFiles/persistence_from_simple_simplex_tree.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_vectors /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_vectors /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_vectors/CMakeFiles/plot_persistence_vectors.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/compute_scalar_product_of_landscapes_on_grid.dir/build.make utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/compute_scalar_product_of_landscapes_on_grid.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_vectors /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_vectors /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_vectors/CMakeFiles/create_persistence_vectors.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_vectors /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_vectors /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_vectors/CMakeFiles/average_persistence_vectors.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_landscapes/CMakeFiles/plot_landscapes.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_landscapes/CMakeFiles/create_landscapes.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_vectors /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_vectors /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_vectors/CMakeFiles/compute_distance_of_persistence_vectors.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Persistence_representations/persistence_vectors /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_vectors /build/gudhi-2.3.0+dfsg/build/utilities/Persistence_representations/persistence_vectors/CMakeFiles/compute_scalar_product_of_persistence_vectors.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_landscapes/CMakeFiles/average_landscapes.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 38%] Built target plot_landscapes make -f example/Persistent_cohomology/CMakeFiles/rips_persistence_step_by_step.dir/build.make example/Persistent_cohomology/CMakeFiles/rips_persistence_step_by_step.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_landscapes/CMakeFiles/compute_distance_of_landscapes.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Persistent_cohomology /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology/CMakeFiles/custom_persistence_sort.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_landscapes/CMakeFiles/compute_scalar_product_of_landscapes.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/plot_landscapes_on_grid.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/create_landscapes_on_grid.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Persistent_cohomology /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology/CMakeFiles/persistence_from_simple_simplex_tree.dir/DependInfo.cmake --color= [ 39%] Built target create_landscapes make -f example/Persistent_cohomology/CMakeFiles/rips_multifield_persistence.dir/build.make example/Persistent_cohomology/CMakeFiles/rips_multifield_persistence.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/compute_distance_of_landscapes_on_grid.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 40%] Built target average_landscapes make -f example/Persistent_cohomology/CMakeFiles/plain_homology.dir/build.make example/Persistent_cohomology/CMakeFiles/plain_homology.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_intervals/CMakeFiles/compute_bottleneck_distance.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 41%] Built target plot_landscapes_on_grid make -f example/Persistent_cohomology/CMakeFiles/rips_persistence_via_boundary_matrix.dir/build.make example/Persistent_cohomology/CMakeFiles/rips_persistence_via_boundary_matrix.dir/depend [ 42%] Built target compute_distance_of_landscapes make -f example/Persistent_cohomology/CMakeFiles/persistence_from_file.dir/build.make example/Persistent_cohomology/CMakeFiles/persistence_from_file.dir/depend [ 43%] Built target create_landscapes_on_grid make -f example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_from_points.dir/build.make example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_from_points.dir/depend [ 44%] Built target compute_scalar_product_of_landscapes make -f example/Rips_complex/CMakeFiles/Rips_complex_example_sparse.dir/build.make example/Rips_complex/CMakeFiles/Rips_complex_example_sparse.dir/depend [ 45%] Built target compute_distance_of_landscapes_on_grid make -f example/Rips_complex/CMakeFiles/Rips_complex_example_from_off.dir/build.make example/Rips_complex/CMakeFiles/Rips_complex_example_from_off.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Persistent_cohomology /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology/CMakeFiles/rips_persistence_step_by_step.dir/DependInfo.cmake --color= [ 46%] Built target compute_bottleneck_distance make -f example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_from_distance_matrix.dir/build.make example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_from_distance_matrix.dir/depend make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/average_landscapes_on_grid.dir/build.make utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/average_landscapes_on_grid.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Persistent_cohomology /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology/CMakeFiles/rips_multifield_persistence.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Persistent_cohomology /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology/CMakeFiles/plain_homology.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Persistent_cohomology /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology/CMakeFiles/rips_persistence_via_boundary_matrix.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_vectors/CMakeFiles/plot_persistence_vectors.dir/build.make utilities/Persistence_representations/persistence_vectors/CMakeFiles/plot_persistence_vectors.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Persistent_cohomology /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology /build/gudhi-2.3.0+dfsg/build/example/Persistent_cohomology/CMakeFiles/persistence_from_file.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Rips_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Rips_complex /build/gudhi-2.3.0+dfsg/build/example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_from_points.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Rips_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Rips_complex /build/gudhi-2.3.0+dfsg/build/example/Rips_complex/CMakeFiles/Rips_complex_example_sparse.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_vectors/CMakeFiles/create_persistence_vectors.dir/build.make utilities/Persistence_representations/persistence_vectors/CMakeFiles/create_persistence_vectors.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_vectors/CMakeFiles/average_persistence_vectors.dir/build.make utilities/Persistence_representations/persistence_vectors/CMakeFiles/average_persistence_vectors.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Rips_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Rips_complex /build/gudhi-2.3.0+dfsg/build/example/Rips_complex/CMakeFiles/Rips_complex_example_from_off.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Rips_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Rips_complex /build/gudhi-2.3.0+dfsg/build/example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_from_distance_matrix.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_vectors/CMakeFiles/compute_distance_of_persistence_vectors.dir/build.make utilities/Persistence_representations/persistence_vectors/CMakeFiles/compute_distance_of_persistence_vectors.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Persistence_representations/persistence_vectors/CMakeFiles/compute_scalar_product_of_persistence_vectors.dir/build.make utilities/Persistence_representations/persistence_vectors/CMakeFiles/compute_scalar_product_of_persistence_vectors.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/compute_scalar_product_of_landscapes_on_grid.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Persistent_cohomology/CMakeFiles/persistence_from_simple_simplex_tree.dir/build.make example/Persistent_cohomology/CMakeFiles/persistence_from_simple_simplex_tree.dir/build [ 47%] Built target compute_scalar_product_of_landscapes_on_grid make -f example/Rips_complex/CMakeFiles/Rips_complex_example_from_csv_distance_matrix.dir/build.make example/Rips_complex/CMakeFiles/Rips_complex_example_from_csv_distance_matrix.dir/depend make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Persistent_cohomology/CMakeFiles/custom_persistence_sort.dir/build.make example/Persistent_cohomology/CMakeFiles/custom_persistence_sort.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Rips_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Rips_complex /build/gudhi-2.3.0+dfsg/build/example/Rips_complex/CMakeFiles/Rips_complex_example_from_csv_distance_matrix.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_landscapes_on_grid/CMakeFiles/average_landscapes_on_grid.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Persistent_cohomology/CMakeFiles/plain_homology.dir/build.make example/Persistent_cohomology/CMakeFiles/plain_homology.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Persistent_cohomology/CMakeFiles/rips_persistence_step_by_step.dir/build.make example/Persistent_cohomology/CMakeFiles/rips_persistence_step_by_step.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_from_points.dir/build.make example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_from_points.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Rips_complex/CMakeFiles/Rips_complex_example_sparse.dir/build.make example/Rips_complex/CMakeFiles/Rips_complex_example_sparse.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Persistent_cohomology/CMakeFiles/persistence_from_file.dir/build.make example/Persistent_cohomology/CMakeFiles/persistence_from_file.dir/build [ 48%] Built target average_landscapes_on_grid make -f example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_rips_from_correlation_matrix.dir/build.make example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_rips_from_correlation_matrix.dir/depend make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_from_distance_matrix.dir/build.make example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_from_distance_matrix.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Persistent_cohomology/CMakeFiles/rips_multifield_persistence.dir/build.make example/Persistent_cohomology/CMakeFiles/rips_multifield_persistence.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Rips_complex/CMakeFiles/Rips_complex_example_from_off.dir/build.make example/Rips_complex/CMakeFiles/Rips_complex_example_from_off.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_vectors/CMakeFiles/plot_persistence_vectors.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_vectors/CMakeFiles/create_persistence_vectors.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_vectors/CMakeFiles/average_persistence_vectors.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Persistent_cohomology/CMakeFiles/rips_persistence_via_boundary_matrix.dir/build.make example/Persistent_cohomology/CMakeFiles/rips_persistence_via_boundary_matrix.dir/build [ 50%] Built target plot_persistence_vectors make -f utilities/Rips_complex/CMakeFiles/rips_distance_matrix_persistence.dir/build.make utilities/Rips_complex/CMakeFiles/rips_distance_matrix_persistence.dir/depend [ 50%] Built target create_persistence_vectors make -f utilities/Rips_complex/CMakeFiles/sparse_rips_persistence.dir/build.make utilities/Rips_complex/CMakeFiles/sparse_rips_persistence.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_vectors/CMakeFiles/compute_distance_of_persistence_vectors.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 51%] Built target average_persistence_vectors make -f utilities/Rips_complex/CMakeFiles/rips_persistence.dir/build.make utilities/Rips_complex/CMakeFiles/rips_persistence.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Persistence_representations/persistence_vectors/CMakeFiles/compute_scalar_product_of_persistence_vectors.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Rips_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Rips_complex /build/gudhi-2.3.0+dfsg/build/example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_rips_from_correlation_matrix.dir/DependInfo.cmake --color= [ 51%] Built target compute_distance_of_persistence_vectors make -f utilities/Rips_complex/CMakeFiles/rips_correlation_matrix_persistence.dir/build.make utilities/Rips_complex/CMakeFiles/rips_correlation_matrix_persistence.dir/depend [ 52%] Built target compute_scalar_product_of_persistence_vectors make -f example/Simplex_tree/CMakeFiles/Simplex_tree_example_from_cliques_of_graph.dir/build.make example/Simplex_tree/CMakeFiles/Simplex_tree_example_from_cliques_of_graph.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Rips_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Rips_complex /build/gudhi-2.3.0+dfsg/build/utilities/Rips_complex/CMakeFiles/rips_distance_matrix_persistence.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Rips_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Rips_complex /build/gudhi-2.3.0+dfsg/build/utilities/Rips_complex/CMakeFiles/sparse_rips_persistence.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Rips_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Rips_complex /build/gudhi-2.3.0+dfsg/build/utilities/Rips_complex/CMakeFiles/rips_persistence.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Rips_complex/CMakeFiles/Rips_complex_example_from_csv_distance_matrix.dir/build.make example/Rips_complex/CMakeFiles/Rips_complex_example_from_csv_distance_matrix.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Rips_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Rips_complex /build/gudhi-2.3.0+dfsg/build/utilities/Rips_complex/CMakeFiles/rips_correlation_matrix_persistence.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Simplex_tree /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree/CMakeFiles/Simplex_tree_example_from_cliques_of_graph.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Persistent_cohomology/CMakeFiles/persistence_from_simple_simplex_tree.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 53%] Built target persistence_from_simple_simplex_tree make -f example/Simplex_tree/CMakeFiles/Simplex_tree_example_simple_simplex_tree.dir/build.make example/Simplex_tree/CMakeFiles/Simplex_tree_example_simple_simplex_tree.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Persistent_cohomology/CMakeFiles/custom_persistence_sort.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_rips_from_correlation_matrix.dir/build.make example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_rips_from_correlation_matrix.dir/build [ 54%] Built target custom_persistence_sort make -f example/Simplex_tree/CMakeFiles/Simplex_tree_example_mini_simplex_tree.dir/build.make example/Simplex_tree/CMakeFiles/Simplex_tree_example_mini_simplex_tree.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_from_points.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Persistent_cohomology/CMakeFiles/plain_homology.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_from_distance_matrix.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Simplex_tree /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree/CMakeFiles/Simplex_tree_example_simple_simplex_tree.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Rips_complex/CMakeFiles/Rips_complex_example_sparse.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 55%] Built target Rips_complex_example_one_skeleton_from_points make -f example/Simplex_tree/CMakeFiles/Simplex_tree_example_graph_expansion_with_blocker.dir/build.make example/Simplex_tree/CMakeFiles/Simplex_tree_example_graph_expansion_with_blocker.dir/depend [ 56%] Built target plain_homology make -f example/Simplex_tree/CMakeFiles/Simplex_tree_example_alpha_shapes_3_from_off.dir/build.make example/Simplex_tree/CMakeFiles/Simplex_tree_example_alpha_shapes_3_from_off.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Persistent_cohomology/CMakeFiles/rips_persistence_step_by_step.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Rips_complex/CMakeFiles/Rips_complex_example_from_off.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Rips_complex/CMakeFiles/rips_distance_matrix_persistence.dir/build.make utilities/Rips_complex/CMakeFiles/rips_distance_matrix_persistence.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Persistent_cohomology/CMakeFiles/persistence_from_file.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 57%] Built target Rips_complex_example_one_skeleton_from_distance_matrix make -f example/Simplex_tree/CMakeFiles/Simplex_tree_example_cech_complex_cgal_mini_sphere_3d.dir/build.make example/Simplex_tree/CMakeFiles/Simplex_tree_example_cech_complex_cgal_mini_sphere_3d.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Simplex_tree /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree/CMakeFiles/Simplex_tree_example_mini_simplex_tree.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Simplex_tree/CMakeFiles/Simplex_tree_example_from_cliques_of_graph.dir/build.make example/Simplex_tree/CMakeFiles/Simplex_tree_example_from_cliques_of_graph.dir/build [ 58%] Built target Rips_complex_example_sparse make -f example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_from_simplices.dir/build.make example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_from_simplices.dir/depend [ 59%] Built target rips_persistence_step_by_step make -f example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_iteration.dir/build.make example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_iteration.dir/depend [ 60%] Built target Rips_complex_example_from_off make -f example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_link.dir/build.make example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_link.dir/depend make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Rips_complex/CMakeFiles/rips_persistence.dir/build.make utilities/Rips_complex/CMakeFiles/rips_persistence.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Persistent_cohomology/CMakeFiles/rips_multifield_persistence.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Simplex_tree /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree/CMakeFiles/Simplex_tree_example_graph_expansion_with_blocker.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Rips_complex/CMakeFiles/rips_correlation_matrix_persistence.dir/build.make utilities/Rips_complex/CMakeFiles/rips_correlation_matrix_persistence.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Simplex_tree /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree/CMakeFiles/Simplex_tree_example_alpha_shapes_3_from_off.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Rips_complex/CMakeFiles/sparse_rips_persistence.dir/build.make utilities/Rips_complex/CMakeFiles/sparse_rips_persistence.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Simplex_tree /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree /build/gudhi-2.3.0+dfsg/build/example/Simplex_tree/CMakeFiles/Simplex_tree_example_cech_complex_cgal_mini_sphere_3d.dir/DependInfo.cmake --color= [ 61%] Built target persistence_from_file make -f example/Spatial_searching/CMakeFiles/Spatial_searching_example_spatial_searching.dir/build.make example/Spatial_searching/CMakeFiles/Spatial_searching_example_spatial_searching.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Skeleton_blocker /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Skeleton_blocker /build/gudhi-2.3.0+dfsg/build/example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_from_simplices.dir/DependInfo.cmake --color= [ 62%] Built target rips_multifield_persistence make -f example/Subsampling/CMakeFiles/Subsampling_example_choose_n_farthest_points.dir/build.make example/Subsampling/CMakeFiles/Subsampling_example_choose_n_farthest_points.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Persistent_cohomology/CMakeFiles/rips_persistence_via_boundary_matrix.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Skeleton_blocker /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Skeleton_blocker /build/gudhi-2.3.0+dfsg/build/example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_iteration.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Skeleton_blocker /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Skeleton_blocker /build/gudhi-2.3.0+dfsg/build/example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_link.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Rips_complex/CMakeFiles/Rips_complex_example_from_csv_distance_matrix.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Simplex_tree/CMakeFiles/Simplex_tree_example_simple_simplex_tree.dir/build.make example/Simplex_tree/CMakeFiles/Simplex_tree_example_simple_simplex_tree.dir/build [ 63%] Built target rips_persistence_via_boundary_matrix make -f example/Subsampling/CMakeFiles/Subsampling_example_pick_n_random_points.dir/build.make example/Subsampling/CMakeFiles/Subsampling_example_pick_n_random_points.dir/depend [ 64%] Built target Rips_complex_example_from_csv_distance_matrix make -f example/Subsampling/CMakeFiles/Subsampling_example_custom_kernel.dir/build.make example/Subsampling/CMakeFiles/Subsampling_example_custom_kernel.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Spatial_searching /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Spatial_searching /build/gudhi-2.3.0+dfsg/build/example/Spatial_searching/CMakeFiles/Spatial_searching_example_spatial_searching.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Simplex_tree/CMakeFiles/Simplex_tree_example_mini_simplex_tree.dir/build.make example/Simplex_tree/CMakeFiles/Simplex_tree_example_mini_simplex_tree.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Subsampling /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Subsampling /build/gudhi-2.3.0+dfsg/build/example/Subsampling/CMakeFiles/Subsampling_example_choose_n_farthest_points.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Subsampling /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Subsampling /build/gudhi-2.3.0+dfsg/build/example/Subsampling/CMakeFiles/Subsampling_example_pick_n_random_points.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Subsampling /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Subsampling /build/gudhi-2.3.0+dfsg/build/example/Subsampling/CMakeFiles/Subsampling_example_custom_kernel.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Simplex_tree/CMakeFiles/Simplex_tree_example_graph_expansion_with_blocker.dir/build.make example/Simplex_tree/CMakeFiles/Simplex_tree_example_graph_expansion_with_blocker.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Rips_complex/CMakeFiles/Rips_complex_example_one_skeleton_rips_from_correlation_matrix.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Simplex_tree/CMakeFiles/Simplex_tree_example_alpha_shapes_3_from_off.dir/build.make example/Simplex_tree/CMakeFiles/Simplex_tree_example_alpha_shapes_3_from_off.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Spatial_searching/CMakeFiles/Spatial_searching_example_spatial_searching.dir/build.make example/Spatial_searching/CMakeFiles/Spatial_searching_example_spatial_searching.dir/build [ 65%] Built target Rips_complex_example_one_skeleton_rips_from_correlation_matrix make -f example/Subsampling/CMakeFiles/Subsampling_example_sparsify_point_set.dir/build.make example/Subsampling/CMakeFiles/Subsampling_example_sparsify_point_set.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Simplex_tree/CMakeFiles/Simplex_tree_example_from_cliques_of_graph.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Simplex_tree/CMakeFiles/Simplex_tree_example_cech_complex_cgal_mini_sphere_3d.dir/build.make example/Simplex_tree/CMakeFiles/Simplex_tree_example_cech_complex_cgal_mini_sphere_3d.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Subsampling/CMakeFiles/Subsampling_example_choose_n_farthest_points.dir/build.make example/Subsampling/CMakeFiles/Subsampling_example_choose_n_farthest_points.dir/build [ 66%] Built target Simplex_tree_example_from_cliques_of_graph make -f example/Tangential_complex/CMakeFiles/Tangential_complex_example_basic.dir/build.make example/Tangential_complex/CMakeFiles/Tangential_complex_example_basic.dir/depend make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Subsampling/CMakeFiles/Subsampling_example_pick_n_random_points.dir/build.make example/Subsampling/CMakeFiles/Subsampling_example_pick_n_random_points.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Subsampling/CMakeFiles/Subsampling_example_custom_kernel.dir/build.make example/Subsampling/CMakeFiles/Subsampling_example_custom_kernel.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Rips_complex/CMakeFiles/rips_distance_matrix_persistence.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Subsampling /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Subsampling /build/gudhi-2.3.0+dfsg/build/example/Subsampling/CMakeFiles/Subsampling_example_sparsify_point_set.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_from_simplices.dir/build.make example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_from_simplices.dir/build [ 67%] Built target rips_distance_matrix_persistence make -f example/Tangential_complex/CMakeFiles/Tangential_complex_example_with_perturb.dir/build.make example/Tangential_complex/CMakeFiles/Tangential_complex_example_with_perturb.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Tangential_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Tangential_complex /build/gudhi-2.3.0+dfsg/build/example/Tangential_complex/CMakeFiles/Tangential_complex_example_basic.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_link.dir/build.make example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_link.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_iteration.dir/build.make example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_iteration.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Simplex_tree/CMakeFiles/Simplex_tree_example_simple_simplex_tree.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Rips_complex/CMakeFiles/rips_correlation_matrix_persistence.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Rips_complex/CMakeFiles/rips_persistence.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Simplex_tree/CMakeFiles/Simplex_tree_example_mini_simplex_tree.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Spatial_searching/CMakeFiles/Spatial_searching_example_spatial_searching.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 68%] Built target Simplex_tree_example_simple_simplex_tree make -f example/Witness_complex/CMakeFiles/Witness_complex_example_off.dir/build.make example/Witness_complex/CMakeFiles/Witness_complex_example_off.dir/depend [ 69%] Built target rips_correlation_matrix_persistence make -f example/Witness_complex/CMakeFiles/Witness_complex_example_nearest_landmark_table.dir/build.make example/Witness_complex/CMakeFiles/Witness_complex_example_nearest_landmark_table.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Tangential_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Tangential_complex /build/gudhi-2.3.0+dfsg/build/example/Tangential_complex/CMakeFiles/Tangential_complex_example_with_perturb.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Rips_complex/CMakeFiles/sparse_rips_persistence.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 70%] Built target rips_persistence make -f example/Witness_complex/CMakeFiles/Witness_complex_example_sphere.dir/build.make example/Witness_complex/CMakeFiles/Witness_complex_example_sphere.dir/depend make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Subsampling/CMakeFiles/Subsampling_example_sparsify_point_set.dir/build.make example/Subsampling/CMakeFiles/Subsampling_example_sparsify_point_set.dir/build [ 71%] Built target Simplex_tree_example_mini_simplex_tree make -f example/Witness_complex/CMakeFiles/Witness_complex_example_strong_off.dir/build.make example/Witness_complex/CMakeFiles/Witness_complex_example_strong_off.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Subsampling/CMakeFiles/Subsampling_example_choose_n_farthest_points.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 72%] Built target Spatial_searching_example_spatial_searching make -f utilities/Witness_complex/CMakeFiles/Witness_complex_weak_witness_persistence.dir/build.make utilities/Witness_complex/CMakeFiles/Witness_complex_weak_witness_persistence.dir/depend [ 73%] Built target sparse_rips_persistence make -f utilities/Witness_complex/CMakeFiles/Witness_complex_strong_witness_persistence.dir/build.make utilities/Witness_complex/CMakeFiles/Witness_complex_strong_witness_persistence.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Simplex_tree/CMakeFiles/Simplex_tree_example_graph_expansion_with_blocker.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 74%] Built target Subsampling_example_choose_n_farthest_points make -f example/Nerve_GIC/CMakeFiles/FuncGIC.dir/build.make example/Nerve_GIC/CMakeFiles/FuncGIC.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Subsampling/CMakeFiles/Subsampling_example_pick_n_random_points.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Witness_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Witness_complex /build/gudhi-2.3.0+dfsg/build/example/Witness_complex/CMakeFiles/Witness_complex_example_off.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Subsampling/CMakeFiles/Subsampling_example_custom_kernel.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Witness_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Witness_complex /build/gudhi-2.3.0+dfsg/build/example/Witness_complex/CMakeFiles/Witness_complex_example_nearest_landmark_table.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Witness_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Witness_complex /build/gudhi-2.3.0+dfsg/build/example/Witness_complex/CMakeFiles/Witness_complex_example_sphere.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Simplex_tree/CMakeFiles/Simplex_tree_example_alpha_shapes_3_from_off.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Witness_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Witness_complex /build/gudhi-2.3.0+dfsg/build/example/Witness_complex/CMakeFiles/Witness_complex_example_strong_off.dir/DependInfo.cmake --color= [ 74%] Built target Simplex_tree_example_graph_expansion_with_blocker make -f example/Nerve_GIC/CMakeFiles/CoordGIC.dir/build.make example/Nerve_GIC/CMakeFiles/CoordGIC.dir/depend [ 75%] Built target Subsampling_example_pick_n_random_points make -f utilities/Nerve_GIC/CMakeFiles/VoronoiGIC.dir/build.make utilities/Nerve_GIC/CMakeFiles/VoronoiGIC.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Witness_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Witness_complex /build/gudhi-2.3.0+dfsg/build/utilities/Witness_complex/CMakeFiles/Witness_complex_weak_witness_persistence.dir/DependInfo.cmake --color= [ 76%] Built target Subsampling_example_custom_kernel make -f utilities/Nerve_GIC/CMakeFiles/Nerve.dir/build.make utilities/Nerve_GIC/CMakeFiles/Nerve.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Witness_complex /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Witness_complex /build/gudhi-2.3.0+dfsg/build/utilities/Witness_complex/CMakeFiles/Witness_complex_strong_witness_persistence.dir/DependInfo.cmake --color= [ 77%] Built target Simplex_tree_example_alpha_shapes_3_from_off make -f GudhUI/CMakeFiles/GudhUI_autogen.dir/build.make GudhUI/CMakeFiles/GudhUI_autogen.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Nerve_GIC /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Nerve_GIC /build/gudhi-2.3.0+dfsg/build/example/Nerve_GIC/CMakeFiles/FuncGIC.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Simplex_tree/CMakeFiles/Simplex_tree_example_cech_complex_cgal_mini_sphere_3d.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/example/Nerve_GIC /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/example/Nerve_GIC /build/gudhi-2.3.0+dfsg/build/example/Nerve_GIC/CMakeFiles/CoordGIC.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Nerve_GIC /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Nerve_GIC /build/gudhi-2.3.0+dfsg/build/utilities/Nerve_GIC/CMakeFiles/VoronoiGIC.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/GudhUI /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/GudhUI /build/gudhi-2.3.0+dfsg/build/GudhUI/CMakeFiles/GudhUI_autogen.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/utilities/Nerve_GIC /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/utilities/Nerve_GIC /build/gudhi-2.3.0+dfsg/build/utilities/Nerve_GIC/CMakeFiles/Nerve.dir/DependInfo.cmake --color= [ 78%] Built target Simplex_tree_example_cech_complex_cgal_mini_sphere_3d make -f cython/CMakeFiles/cython.dir/build.make cython/CMakeFiles/cython.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Subsampling/CMakeFiles/Subsampling_example_sparsify_point_set.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/cython /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/cython /build/gudhi-2.3.0+dfsg/build/cython/CMakeFiles/cython.dir/DependInfo.cmake --color= [ 79%] Built target Subsampling_example_sparsify_point_set make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f GudhUI/CMakeFiles/GudhUI_autogen.dir/build.make GudhUI/CMakeFiles/GudhUI_autogen.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Witness_complex/CMakeFiles/Witness_complex_example_nearest_landmark_table.dir/build.make example/Witness_complex/CMakeFiles/Witness_complex_example_nearest_landmark_table.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f cython/CMakeFiles/cython.dir/build.make cython/CMakeFiles/cython.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_from_simplices.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Witness_complex/CMakeFiles/Witness_complex_example_sphere.dir/build.make example/Witness_complex/CMakeFiles/Witness_complex_example_sphere.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_link.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 79%] Automatic MOC and UIC for target GudhUI cd /build/gudhi-2.3.0+dfsg/build/GudhUI && /usr/bin/cmake -E cmake_autogen /build/gudhi-2.3.0+dfsg/build/GudhUI/CMakeFiles/GudhUI_autogen.dir/AutogenInfo.cmake None make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Witness_complex/CMakeFiles/Witness_complex_example_strong_off.dir/build.make example/Witness_complex/CMakeFiles/Witness_complex_example_strong_off.dir/build [ 80%] Built target Skeleton_blocker_example_from_simplices make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Skeleton_blocker/CMakeFiles/Skeleton_blocker_example_iteration.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' [ 81%] Built target Skeleton_blocker_example_link [ 82%] Built target Skeleton_blocker_example_iteration [ 82%] Generating gudhi.so cd /build/gudhi-2.3.0+dfsg/build/cython && /usr/bin/python3.7 /build/gudhi-2.3.0+dfsg/build/cython/setup.py build_ext --inplace make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Witness_complex/CMakeFiles/Witness_complex_weak_witness_persistence.dir/build.make utilities/Witness_complex/CMakeFiles/Witness_complex_weak_witness_persistence.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Witness_complex/CMakeFiles/Witness_complex_strong_witness_persistence.dir/build.make utilities/Witness_complex/CMakeFiles/Witness_complex_strong_witness_persistence.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Nerve_GIC/CMakeFiles/FuncGIC.dir/build.make example/Nerve_GIC/CMakeFiles/FuncGIC.dir/build AutoMoc warning --------------- "/build/gudhi-2.3.0+dfsg/GudhUI/gui/Menu_edge_contraction.cpp" The file includes the moc file "Menu_edge_contraction.moc", but does not contain a Q_OBJECT, Q_GADGET or Q_NAMESPACE macro. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Nerve_GIC/CMakeFiles/CoordGIC.dir/build.make example/Nerve_GIC/CMakeFiles/CoordGIC.dir/build AutoMoc warning --------------- "/build/gudhi-2.3.0+dfsg/GudhUI/gui/Menu_persistence.cpp" The file includes the moc file "Menu_persistence.moc", but does not contain a Q_OBJECT, Q_GADGET or Q_NAMESPACE macro. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Nerve_GIC/CMakeFiles/VoronoiGIC.dir/build.make utilities/Nerve_GIC/CMakeFiles/VoronoiGIC.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f utilities/Nerve_GIC/CMakeFiles/Nerve.dir/build.make utilities/Nerve_GIC/CMakeFiles/Nerve.dir/build AutoMoc warning --------------- "/build/gudhi-2.3.0+dfsg/GudhUI/view/Viewer.cpp" The file includes the moc file "Viewer.moc", but does not contain a Q_OBJECT, Q_GADGET or Q_NAMESPACE macro. AutoMoc warning --------------- "/build/gudhi-2.3.0+dfsg/GudhUI/gui/Menu_uniform_neighbors.cpp" The file includes the moc file "Menu_uniform_neighbors.moc", but does not contain a Q_OBJECT, Q_GADGET or Q_NAMESPACE macro. AutoMoc warning --------------- "/build/gudhi-2.3.0+dfsg/GudhUI/gui/MainWindow.cpp" The file includes the moc file "MainWindow.moc", but does not contain a Q_OBJECT, Q_GADGET or Q_NAMESPACE macro. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Witness_complex/CMakeFiles/Witness_complex_example_off.dir/build.make example/Witness_complex/CMakeFiles/Witness_complex_example_off.dir/build AutoMoc warning --------------- "/build/gudhi-2.3.0+dfsg/GudhUI/gui/Menu_k_nearest_neighbors.cpp" The file includes the moc file "Menu_k_nearest_neighbors.moc", but does not contain a Q_OBJECT, Q_GADGET or Q_NAMESPACE macro. AutoMoc warning --------------- "/build/gudhi-2.3.0+dfsg/GudhUI/view/Viewer_instructor.cpp" The file includes the moc file "Viewer_instructor.moc", but does not contain a Q_OBJECT, Q_GADGET or Q_NAMESPACE macro. make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Witness_complex/CMakeFiles/Witness_complex_example_nearest_landmark_table.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Witness_complex/CMakeFiles/Witness_complex_example_strong_off.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Witness_complex/CMakeFiles/Witness_complex_example_sphere.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 83%] Built target Witness_complex_example_nearest_landmark_table [ 84%] Built target Witness_complex_example_strong_off [ 85%] Built target Witness_complex_example_sphere make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Witness_complex/CMakeFiles/Witness_complex_strong_witness_persistence.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Nerve_GIC/CMakeFiles/FuncGIC.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Witness_complex/CMakeFiles/Witness_complex_weak_witness_persistence.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Nerve_GIC/CMakeFiles/CoordGIC.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 86%] Built target Witness_complex_strong_witness_persistence make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Nerve_GIC/CMakeFiles/VoronoiGIC.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 87%] Built target FuncGIC make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'utilities/Nerve_GIC/CMakeFiles/Nerve.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 88%] Built target Witness_complex_weak_witness_persistence [ 89%] Built target CoordGIC [ 90%] Built target VoronoiGIC [ 91%] Built target Nerve make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Witness_complex/CMakeFiles/Witness_complex_example_off.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 92%] Built target Witness_complex_example_off make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 92%] Built target GudhUI_autogen make -f GudhUI/CMakeFiles/GudhUI.dir/build.make GudhUI/CMakeFiles/GudhUI.dir/depend make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' cd /build/gudhi-2.3.0+dfsg/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/gudhi-2.3.0+dfsg /build/gudhi-2.3.0+dfsg/GudhUI /build/gudhi-2.3.0+dfsg/build /build/gudhi-2.3.0+dfsg/build/GudhUI /build/gudhi-2.3.0+dfsg/build/GudhUI/CMakeFiles/GudhUI.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Tangential_complex/CMakeFiles/Tangential_complex_example_basic.dir/build.make example/Tangential_complex/CMakeFiles/Tangential_complex_example_basic.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f example/Tangential_complex/CMakeFiles/Tangential_complex_example_with_perturb.dir/build.make example/Tangential_complex/CMakeFiles/Tangential_complex_example_with_perturb.dir/build make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make -f GudhUI/CMakeFiles/GudhUI.dir/build.make GudhUI/CMakeFiles/GudhUI.dir/build make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Tangential_complex/CMakeFiles/Tangential_complex_example_basic.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'example/Tangential_complex/CMakeFiles/Tangential_complex_example_with_perturb.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 93%] Built target Tangential_complex_example_basic [ 93%] Built target Tangential_complex_example_with_perturb make[4]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[4]: Nothing to be done for 'GudhUI/CMakeFiles/GudhUI.dir/build'. make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [ 98%] Built target GudhUI running build_ext /usr/lib/python3.7/distutils/dist.py:274: UserWarning: Unknown distribution option: 'install_requires' warnings.warn(msg) [100%] Do not forget to add /build/gudhi-2.3.0+dfsg/build/cython/ to your PYTHONPATH before using examples or tests make[4]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' [100%] Built target cython make[3]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' /usr/bin/cmake -E cmake_progress_start /build/gudhi-2.3.0+dfsg/build/CMakeFiles 0 make -f CMakeFiles/Makefile2 preinstall make[3]: Entering directory '/build/gudhi-2.3.0+dfsg/build' make[3]: Nothing to be done for 'preinstall'. make[3]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "None" -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/share/gudhi/GUDHIConfig.cmake -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/share/gudhi/GUDHIConfigVersion.cmake -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Witness_complex -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Witness_complex/all_faces_in.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Tangential_complex -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Tangential_complex/Simplicial_complex.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Tangential_complex/config.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Tangential_complex/utilities.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/choose_n_farthest_points.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Strong_witness_complex.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Contraction -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Contraction/CGAL_queue -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Contraction/CGAL_queue/Modifiable_priority_queue.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Contraction/policies -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Contraction/policies/Placement_policy.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Contraction/policies/Cost_policy.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Contraction/policies/Valid_contraction_policy.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Contraction/policies/Contraction_visitor.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Contraction/policies/First_vertex_placement.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Contraction/policies/Edge_length_cost.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Contraction/policies/Dummy_valid_contraction.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Contraction/policies/Middle_placement.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Contraction/policies/Link_condition_valid_contraction.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Contraction/Edge_profile.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Persistence_landscape_on_grid.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Bitmap_cubical_complex -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Bitmap_cubical_complex/counter.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Persistence_intervals.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Skeleton_blocker_geometric_complex.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/GIC.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/graph_simplicial_complex.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Internal_point.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Miniball.hpp -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/sparsify_point_set.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Witness_complex.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/random_point_generators.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Persistence_heat_maps.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Bitmap_cubical_complex.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Persistent_cohomology.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Bottleneck.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/PSSK.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Off_reader.h -- Installing: 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/build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Miniball.README -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/console_color.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Persistent_cohomology -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Persistent_cohomology/Persistent_cohomology_column.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Persistent_cohomology/Multi_field.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Persistent_cohomology/Field_Zp.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Bitmap_cubical_complex_periodic_boundary_conditions_base.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Tangential_complex.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Simple_object_pool.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Euclidean_strong_witness_complex.h -- Installing: 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/build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/common_persistence_representations.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Skeleton_blocker -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Skeleton_blocker/Skeleton_blocker_complex_visitor.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Skeleton_blocker/Skeleton_blocker_simplex.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Skeleton_blocker/Skeleton_blocker_link_superior.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Skeleton_blocker/Skeleton_blocker_simple_traits.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Skeleton_blocker/Skeleton_blocker_sub_complex.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Skeleton_blocker/internal -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Skeleton_blocker/internal/Top_faces.h -- Installing: 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/build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Skeleton_blocker/Skeleton_blocker_simple_geometric_traits.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Skeleton_blocker/Skeleton_blocker_off_io.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Simplex_tree -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Simplex_tree/Simplex_tree_node_explicit_storage.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Simplex_tree/indexing_tag.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Simplex_tree/Simplex_tree_iterators.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Simplex_tree/Simplex_tree_siblings.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Persistence_intervals_with_distances.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Persistence_landscape.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Points_off_io.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Simplex_tree.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Bitmap_cubical_complex_base.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Clock.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Points_3D_off_io.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Euclidean_witness_complex.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Neighbors_finder.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Sparse_rips_complex.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Hasse_complex.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Point.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Persistence_vectors.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Skeleton_blocker_simplifiable_complex.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/read_persistence_from_file.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/Cech_complex.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/reader_utils.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/include/gudhi/allocator.h -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/vector_double_off_reader -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/cgal_3D_off_reader -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/cgal_off_reader -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/off_file_from_shape_generator -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/Alpha_complex_example_from_points -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/Alpha_complex_example_from_off -- Installing: 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/build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/plot_persistence_Betti_numbers -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/compute_birth_death_range_in_persistence_diagram -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/compute_number_of_dominant_intervals -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/compute_bottleneck_distance -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/create_landscapes -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/plot_landscapes -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/average_landscapes -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/compute_distance_of_landscapes -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/compute_scalar_product_of_landscapes -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/create_landscapes_on_grid -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/plot_landscapes_on_grid -- Installing: 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/build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/rips_persistence -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/rips_correlation_matrix_persistence -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/sparse_rips_persistence -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/Simplex_tree_example_from_cliques_of_graph -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/Simplex_tree_example_simple_simplex_tree -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/Simplex_tree_example_mini_simplex_tree -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/Simplex_tree_example_alpha_shapes_3_from_off -- Up-to-date: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/Simplex_tree_example_alpha_shapes_3_from_off -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/Simplex_tree_example_graph_expansion_with_blocker -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/Skeleton_blocker_example_from_simplices -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/Skeleton_blocker_example_iteration -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/Skeleton_blocker_example_link -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/Spatial_searching_example_spatial_searching -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/Subsampling_example_pick_n_random_points -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/Subsampling_example_choose_n_farthest_points -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/Subsampling_example_custom_kernel -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/Subsampling_example_sparsify_point_set -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/Tangential_complex_example_basic -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/Tangential_complex_example_with_perturb -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/Witness_complex_example_nearest_landmark_table -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/Witness_complex_example_off -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/Witness_complex_example_sphere -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/Witness_complex_example_strong_off -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/Witness_complex_strong_witness_persistence -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/Witness_complex_weak_witness_persistence -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/CoordGIC -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/FuncGIC -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/Nerve -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/VoronoiGIC -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/KeplerMapperVisuFromTxtFile.py -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/km.py -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/km.py.COPYRIGHT -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/bin/GudhUI -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/lib/python3/dist-packages//cython -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/lib/python3/dist-packages//cython/gudhi.cpython-37m-i386-linux-gnu.so -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/lib/python3/dist-packages//cython/build -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/lib/python3/dist-packages//cython/build/temp.linux-x86_64-3.7 -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/lib/python3/dist-packages//cython/build/temp.linux-x86_64-3.7/build -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/lib/python3/dist-packages//cython/build/temp.linux-x86_64-3.7/build/gudhi-2.3.0+dfsg -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/lib/python3/dist-packages//cython/build/temp.linux-x86_64-3.7/build/gudhi-2.3.0+dfsg/build -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/lib/python3/dist-packages//cython/build/temp.linux-x86_64-3.7/build/gudhi-2.3.0+dfsg/build/cython -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/lib/python3/dist-packages//cython/CMakeFiles -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/lib/python3/dist-packages//cython/CMakeFiles/sphinx.dir -- Installing: /build/gudhi-2.3.0+dfsg/debian/tmp/usr/lib/python3/dist-packages//cython/CMakeFiles/cython.dir make[2]: Leaving directory '/build/gudhi-2.3.0+dfsg/build' for py3ver in ; do \ dh_auto_install --builddirectory=build$py3ver ; \ done rm debian/tmp/usr/include/gudhi/Miniball.COPYRIGHT rm debian/tmp/usr/include/gudhi/Miniball.README mv debian/tmp/usr/bin/Nerve \ debian/tmp/usr/bin/gudhi-nerve mv debian/tmp/usr/bin/VoronoiGIC \ debian/tmp/usr/bin/gudhi-voronoi-gic mv debian/tmp/usr/bin/Witness_complex_strong_witness_persistence \ debian/tmp/usr/bin/gudhi-witness-complex-strong-witness-persistence mv debian/tmp/usr/bin/Witness_complex_weak_witness_persistence \ debian/tmp/usr/bin/gudhi-witness-complex-weak-witness-persistence mv debian/tmp/usr/bin/alpha_complex_3d_persistence \ debian/tmp/usr/bin/gudhi-alpha-complex-3d-persistence mv debian/tmp/usr/bin/alpha_complex_persistence \ debian/tmp/usr/bin/gudhi-alpha-complex-persistence mv debian/tmp/usr/bin/bottleneck_distance \ debian/tmp/usr/bin/gudhi-bottleneck-distance mv debian/tmp/usr/bin/cech_persistence \ debian/tmp/usr/bin/gudhi-cech-persistence mv debian/tmp/usr/bin/cubical_complex_persistence \ debian/tmp/usr/bin/gudhi-cubical-complex-persistence mv debian/tmp/usr/bin/exact_alpha_complex_3d_persistence \ debian/tmp/usr/bin/gudhi-exact-alpha-complex-3d-persistence mv debian/tmp/usr/bin/off_file_from_shape_generator \ debian/tmp/usr/bin/gudhi-off-file-from-shape-generator mv debian/tmp/usr/bin/periodic_alpha_complex_3d_persistence \ debian/tmp/usr/bin/gudhi-periodic-alpha-complex-3d-persistence mv debian/tmp/usr/bin/periodic_cubical_complex_persistence \ debian/tmp/usr/bin/gudhi-periodic-cubical-complex-persistence mv debian/tmp/usr/bin/rips_correlation_matrix_persistence \ debian/tmp/usr/bin/gudhi-rips-correlation-matrix-persistence mv debian/tmp/usr/bin/rips_distance_matrix_persistence \ debian/tmp/usr/bin/gudhi-rips-distance-matrix-persistence mv debian/tmp/usr/bin/rips_persistence \ debian/tmp/usr/bin/gudhi-rips-persistence mv debian/tmp/usr/bin/sparse_rips_persistence \ debian/tmp/usr/bin/gudhi-sparse-rips-persistence mv debian/tmp/usr/bin/weighted_alpha_complex_3d_persistence \ debian/tmp/usr/bin/gudhi-weighted-alpha-complex-3d-persistence mv debian/tmp/usr/bin/weighted_periodic_alpha_complex_3d_persistence \ debian/tmp/usr/bin/gudhi-weighted-periodic-alpha-complex-3d-persistence install -D build/GudhUI/GudhUI debian/tmp/usr/bin/gudhui make[1]: Leaving directory '/build/gudhi-2.3.0+dfsg' dh_install -O--builddirectory=build dh_installdocs -O--builddirectory=build dh_installchangelogs -O--builddirectory=build dh_installman -O--builddirectory=build dh_python3 -O--builddirectory=build dh_installinit -O--builddirectory=build dh_perl -O--builddirectory=build dh_link -O--builddirectory=build dh_strip_nondeterminism -O--builddirectory=build debian/rules override_dh_compress make[1]: Entering directory '/build/gudhi-2.3.0+dfsg' dh_compress -X.cpp make[1]: Leaving directory '/build/gudhi-2.3.0+dfsg' dh_fixperms -O--builddirectory=build dh_missing -O--builddirectory=build dh_strip -O--builddirectory=build dh_makeshlibs -O--builddirectory=build dh_shlibdeps -O--builddirectory=build dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/python3-gudhi/usr/lib/python3/dist-packages/gudhi.cpython-37m-i386-linux-gnu.so was not linked against libtbbmalloc.so.2 (it uses none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/python3-gudhi/usr/lib/python3/dist-packages/gudhi.cpython-37m-i386-linux-gnu.so was not linked against libboost_system.so.1.67.0 (it uses none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/python3-gudhi/usr/lib/python3/dist-packages/gudhi.cpython-37m-i386-linux-gnu.so was not linked against libgmpxx.so.4 (it uses none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/gudhui/usr/bin/gudhui was not linked against libtbbmalloc.so.2 (it uses none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/gudhui/usr/bin/gudhui was not linked against libGLU.so.1 (it uses none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/gudhui/usr/bin/gudhui was not linked against libmpfr.so.6 (it uses none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/gudhui/usr/bin/gudhui was not linked against libgmp.so.10 (it uses none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/gudhui/usr/bin/gudhui was not linked against libatomic.so.1 (it uses none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/gudhui/usr/bin/gudhui was not linked against libgmpxx.so.4 (it uses none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/gudhui/usr/bin/gudhui was not linked against libQt5Xml.so.5 (it uses none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/gudhi-utils/usr/bin/gudhi-periodic-cubical-complex-persistence debian/gudhi-utils/usr/bin/gudhi-alpha-complex-3d-persistence debian/gudhi-utils/usr/bin/gudhi-rips-persistence debian/gudhi-utils/usr/bin/gudhi-witness-complex-weak-witness-persistence debian/gudhi-utils/usr/bin/gudhi-nerve debian/gudhi-utils/usr/bin/gudhi-rips-distance-matrix-persistence debian/gudhi-utils/usr/bin/gudhi-periodic-alpha-complex-3d-persistence debian/gudhi-utils/usr/bin/gudhi-cubical-complex-persistence debian/gudhi-utils/usr/bin/gudhi-rips-correlation-matrix-persistence debian/gudhi-utils/usr/bin/gudhi-exact-alpha-complex-3d-persistence debian/gudhi-utils/usr/bin/gudhi-off-file-from-shape-generator debian/gudhi-utils/usr/bin/gudhi-voronoi-gic debian/gudhi-utils/usr/bin/gudhi-alpha-complex-persistence debian/gudhi-utils/usr/bin/gudhi-sparse-rips-persistence debian/gudhi-utils/usr/bin/gudhi-weighted-periodic-alpha-complex-3d-persistence debian/gudhi-utils/usr/bin/gudhi-bottleneck-distance debian/gudhi-utils/usr/bin/gudhi-witness-complex-strong-witness-persistence debian/gudhi-utils/usr/bin/gudhi-cech-persistence debian/gudhi-utils/usr/bin/gudhi-weighted-alpha-complex-3d-persistence were not linked against libgmpxx.so.4 (they use none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/gudhi-utils/usr/bin/gudhi-periodic-cubical-complex-persistence debian/gudhi-utils/usr/bin/gudhi-alpha-complex-3d-persistence debian/gudhi-utils/usr/bin/gudhi-rips-persistence debian/gudhi-utils/usr/bin/gudhi-witness-complex-weak-witness-persistence debian/gudhi-utils/usr/bin/gudhi-nerve debian/gudhi-utils/usr/bin/gudhi-rips-distance-matrix-persistence debian/gudhi-utils/usr/bin/gudhi-periodic-alpha-complex-3d-persistence debian/gudhi-utils/usr/bin/gudhi-cubical-complex-persistence debian/gudhi-utils/usr/bin/gudhi-rips-correlation-matrix-persistence debian/gudhi-utils/usr/bin/gudhi-exact-alpha-complex-3d-persistence debian/gudhi-utils/usr/bin/gudhi-voronoi-gic debian/gudhi-utils/usr/bin/gudhi-alpha-complex-persistence debian/gudhi-utils/usr/bin/gudhi-sparse-rips-persistence debian/gudhi-utils/usr/bin/gudhi-weighted-periodic-alpha-complex-3d-persistence debian/gudhi-utils/usr/bin/gudhi-bottleneck-distance debian/gudhi-utils/usr/bin/gudhi-witness-complex-strong-witness-persistence debian/gudhi-utils/usr/bin/gudhi-cech-persistence debian/gudhi-utils/usr/bin/gudhi-weighted-alpha-complex-3d-persistence were not linked against libtbbmalloc.so.2 (they use none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/gudhi-utils/usr/bin/gudhi-periodic-cubical-complex-persistence debian/gudhi-utils/usr/bin/gudhi-alpha-complex-3d-persistence debian/gudhi-utils/usr/bin/gudhi-rips-persistence debian/gudhi-utils/usr/bin/gudhi-witness-complex-weak-witness-persistence debian/gudhi-utils/usr/bin/gudhi-nerve debian/gudhi-utils/usr/bin/gudhi-rips-distance-matrix-persistence debian/gudhi-utils/usr/bin/gudhi-periodic-alpha-complex-3d-persistence debian/gudhi-utils/usr/bin/gudhi-cubical-complex-persistence debian/gudhi-utils/usr/bin/gudhi-rips-correlation-matrix-persistence debian/gudhi-utils/usr/bin/gudhi-exact-alpha-complex-3d-persistence debian/gudhi-utils/usr/bin/gudhi-voronoi-gic debian/gudhi-utils/usr/bin/gudhi-alpha-complex-persistence debian/gudhi-utils/usr/bin/gudhi-sparse-rips-persistence debian/gudhi-utils/usr/bin/gudhi-weighted-periodic-alpha-complex-3d-persistence debian/gudhi-utils/usr/bin/gudhi-bottleneck-distance debian/gudhi-utils/usr/bin/gudhi-witness-complex-strong-witness-persistence debian/gudhi-utils/usr/bin/gudhi-cech-persistence debian/gudhi-utils/usr/bin/gudhi-weighted-alpha-complex-3d-persistence were not linked against libatomic.so.1 (they use none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/gudhi-utils/usr/bin/gudhi-rips-correlation-matrix-persistence was not linked against libboost_system.so.1.67.0 (it uses none of the library's symbols) dh_installdeb -O--builddirectory=build dh_gencontrol -O--builddirectory=build dpkg-gencontrol: warning: package python3-gudhi: substitution variable ${python3:Provides} unused, but is defined dpkg-gencontrol: warning: package python3-gudhi: substitution variable ${python3:Versions} unused, but is defined dpkg-gencontrol: warning: package python3-gudhi: substitution variable ${python3:Provides} unused, but is defined dpkg-gencontrol: warning: package python3-gudhi: substitution variable ${python3:Versions} unused, but is defined dh_md5sums -O--builddirectory=build dh_builddeb -O--builddirectory=build dpkg-deb: building package 'gudhi-utils' in '../gudhi-utils_2.3.0+dfsg-2_i386.deb'. dpkg-deb: building package 'gudhui' in '../gudhui_2.3.0+dfsg-2_i386.deb'. dpkg-deb: building package 'libgudhi-doc' in '../libgudhi-doc_2.3.0+dfsg-2_all.deb'. dpkg-deb: building package 'libgudhi-examples' in '../libgudhi-examples_2.3.0+dfsg-2_all.deb'. dpkg-deb: building package 'python3-gudhi' in '../python3-gudhi_2.3.0+dfsg-2_i386.deb'. dpkg-deb: building package 'python3-gudhi-dbgsym' in '../python3-gudhi-dbgsym_2.3.0+dfsg-2_i386.deb'. dpkg-deb: building package 'gudhui-dbgsym' in '../gudhui-dbgsym_2.3.0+dfsg-2_i386.deb'. dpkg-deb: building package 'gudhi-utils-dbgsym' in '../gudhi-utils-dbgsym_2.3.0+dfsg-2_i386.deb'. dpkg-deb: building package 'libgudhi-dev' in '../libgudhi-dev_2.3.0+dfsg-2_all.deb'. for py3ver in ; do \ dh binary --with=python3 --builddirectory=build$py3ver ; \ done dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../gudhi_2.3.0+dfsg-2_i386.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/10476 and its subdirectories I: Current time: Mon Oct 18 07:56:42 -12 2021 I: pbuilder-time-stamp: 1634587002 Tue Sep 15 13:33:44 UTC 2020 I: 1st build successful. Starting 2nd build on remote node profitbricks-build2-i386.debian.net. Tue Sep 15 13:33:44 UTC 2020 I: Preparing to do remote build '2' on profitbricks-build2-i386.debian.net. Tue Sep 15 13:55:21 UTC 2020 I: Deleting $TMPDIR on profitbricks-build2-i386.debian.net. Tue Sep 15 13:55:22 UTC 2020 I: gudhi_2.3.0+dfsg-2_i386.changes: Format: 1.8 Date: Fri, 05 Oct 2018 17:05:03 +0200 Source: gudhi Binary: gudhi-utils gudhi-utils-dbgsym gudhui gudhui-dbgsym libgudhi-dev libgudhi-doc libgudhi-examples python3-gudhi python3-gudhi-dbgsym Architecture: i386 all Version: 2.3.0+dfsg-2 Distribution: unstable Urgency: medium Maintainer: Gard Spreemann Changed-By: Gard Spreemann Description: gudhi-utils - Utilities from the GUDHI library gudhui - GUI for some of the functionality of the GUDHI library libgudhi-dev - Generic open source C++ library for topological data analysis libgudhi-doc - Documentation for the GUDHI library libgudhi-examples - Example programs for the GUDHI library python3-gudhi - Python 3 interface to the GUDHI library Changes: gudhi (2.3.0+dfsg-2) unstable; urgency=medium . * Disable parallel building on certain architectures to avoid buildds running out of memory. * New patch to properly propagate CXXFLAGS when building the Python modules. Checksums-Sha1: 8476ee6ae243a8e3401a46ef9c07134d94ba0a71 33372108 gudhi-utils-dbgsym_2.3.0+dfsg-2_i386.deb e13df902452d17bc2e4fd38424854980021671ee 1054024 gudhi-utils_2.3.0+dfsg-2_i386.deb 76a1ae55d9b75dea169505bbaf40d59a892f87c2 16493 gudhi_2.3.0+dfsg-2_i386.buildinfo 5ea45bd4bece25ed8b2421b168ff96edc87d8d66 4252572 gudhui-dbgsym_2.3.0+dfsg-2_i386.deb ab5b7ef8a07c29b5212e50ec1830ae5ba75787a8 184104 gudhui_2.3.0+dfsg-2_i386.deb c6d466c2ea365ce4ed32456cf83630491cf86ba6 180824 libgudhi-dev_2.3.0+dfsg-2_all.deb dd866dd76088ece7ab3d5f0d7cb6a080396aac08 4093464 libgudhi-doc_2.3.0+dfsg-2_all.deb b973e350ced58c3ffd4af41fe475dac90e979dd8 30340 libgudhi-examples_2.3.0+dfsg-2_all.deb a10d47136244e7a7b752be4ec3baeaf54037b04c 10731116 python3-gudhi-dbgsym_2.3.0+dfsg-2_i386.deb 99f44b21321ad6abdda96fb167184091147cbae2 447884 python3-gudhi_2.3.0+dfsg-2_i386.deb Checksums-Sha256: dbaab15f8e871d868dd0845d7ab9c009bdda73cefb0feade71a255f8edb68386 33372108 gudhi-utils-dbgsym_2.3.0+dfsg-2_i386.deb 5d8b0d71a898ccbfd36ba5d3bb900dc0ea50f77003d4a87237c0a1a8942b455c 1054024 gudhi-utils_2.3.0+dfsg-2_i386.deb 5bd5b69b3fe8df1ea3d7020232b9c114aef1ae13bb57dc8467457b1e79c8a551 16493 gudhi_2.3.0+dfsg-2_i386.buildinfo 14394fb0948fb0b35f965f05f5d1310e4d641330d925226b784413160b780384 4252572 gudhui-dbgsym_2.3.0+dfsg-2_i386.deb 75639dfdbbb7f82319e464144014b3adc7ebab73474e5639642c1b1b045d6f3f 184104 gudhui_2.3.0+dfsg-2_i386.deb 974cbe119fcbc6f7aa763ca571184ed446b4c430a0cc32c9756772d1c4d65319 180824 libgudhi-dev_2.3.0+dfsg-2_all.deb 63707bde152a6accfde5ce582d2de9799f2317a10fb4f289d9a4a535484e581e 4093464 libgudhi-doc_2.3.0+dfsg-2_all.deb cf8dc356d2349e4f53b390e34da2d43ec515ff0a2c9347a8aabdc7108c506b7e 30340 libgudhi-examples_2.3.0+dfsg-2_all.deb 7032645dd1f02b3a84be6a1b55068254ae81ff786001e199a27a18713bdebb7c 10731116 python3-gudhi-dbgsym_2.3.0+dfsg-2_i386.deb df59da1bf9ccec81de2a04769762f563835a3c5ff6f84ab6258aacee99cfb8cd 447884 python3-gudhi_2.3.0+dfsg-2_i386.deb Files: 5f6a680cb38b002af648450fa418a2fc 33372108 debug optional gudhi-utils-dbgsym_2.3.0+dfsg-2_i386.deb d9676031a3ae83cb018b25ba4b16e814 1054024 math optional gudhi-utils_2.3.0+dfsg-2_i386.deb acc9ade5074e28470ad7779c5b9bec29 16493 math optional gudhi_2.3.0+dfsg-2_i386.buildinfo 86901cff2639c240090c3533ec18df8e 4252572 debug optional gudhui-dbgsym_2.3.0+dfsg-2_i386.deb b03e3abbabfe9b892518e24136d519b0 184104 math optional gudhui_2.3.0+dfsg-2_i386.deb 07ce91a7b3b6b35a81012fbcfcb16ae4 180824 libdevel optional libgudhi-dev_2.3.0+dfsg-2_all.deb 983189b5370a86fdcdd30692d7bc055a 4093464 doc optional libgudhi-doc_2.3.0+dfsg-2_all.deb 47ef9f960115ef642340828a462d07bd 30340 misc optional libgudhi-examples_2.3.0+dfsg-2_all.deb 68832cc7d6534b0a9f09bd888870f2e8 10731116 debug optional python3-gudhi-dbgsym_2.3.0+dfsg-2_i386.deb 9ea3b4c1f3d763bb9a39388c39a222f1 447884 python optional python3-gudhi_2.3.0+dfsg-2_i386.deb Tue Sep 15 13:55:26 UTC 2020 I: diffoscope 160 will be used to compare the two builds: W: /var/lib/schroot/session/jenkins-reproducible-bullseye-diffoscope-db67c0bb-0d26-4866-ab70-05fe6fb53a21: Failed to stat file: No such file or directory # Profiling output for: /usr/bin/diffoscope --html /srv/reproducible-results/rbuild-debian/tmp.NDDvDdIR6f/gudhi_2.3.0+dfsg-2.diffoscope.html --text /srv/reproducible-results/rbuild-debian/tmp.NDDvDdIR6f/gudhi_2.3.0+dfsg-2.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/tmp.NDDvDdIR6f/gudhi_2.3.0+dfsg-2.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/tmp.NDDvDdIR6f/b1/gudhi_2.3.0+dfsg-2_i386.changes /srv/reproducible-results/rbuild-debian/tmp.NDDvDdIR6f/b2/gudhi_2.3.0+dfsg-2_i386.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.823s) 0.823s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.618s) 0.617s 10 calls diffoscope.comparators.binary.FilesystemFile 0.000s 8 calls abc.DotChangesFile Tue Sep 15 13:55:34 UTC 2020 I: diffoscope 160 found no differences in the changes files, and a .buildinfo file also exists. Tue Sep 15 13:55:34 UTC 2020 I: gudhi from buster built successfully and reproducibly on i386. Tue Sep 15 13:55:36 UTC 2020 I: Submitting .buildinfo files to external archives: Tue Sep 15 13:55:36 UTC 2020 I: Submitting 20K b1/gudhi_2.3.0+dfsg-2_i386.buildinfo.asc Tue Sep 15 13:55:38 UTC 2020 I: Submitting 20K b2/gudhi_2.3.0+dfsg-2_i386.buildinfo.asc Tue Sep 15 13:55:38 UTC 2020 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Tue Sep 15 13:55:38 UTC 2020 I: Done submitting .buildinfo files. Tue Sep 15 13:55:38 UTC 2020 I: Removing signed gudhi_2.3.0+dfsg-2_i386.buildinfo.asc files: removed './b1/gudhi_2.3.0+dfsg-2_i386.buildinfo.asc' removed './b2/gudhi_2.3.0+dfsg-2_i386.buildinfo.asc'