Thu Jul 30 02:21:15 UTC 2020 I: starting to build sigma-align/buster/armhf on jenkins on '2020-07-30 02:21' Thu Jul 30 02:21:15 UTC 2020 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/armhf_45/1113/console.log Thu Jul 30 02:21:15 UTC 2020 I: Downloading source for buster/sigma-align=1.1.3-6 --2020-07-30 02:21:15-- http://deb.debian.org/debian/pool/main/s/sigma-align/sigma-align_1.1.3-6.dsc Connecting to 78.137.99.97:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2018 (2.0K) Saving to: ‘sigma-align_1.1.3-6.dsc’ 0K . 100% 103M=0s 2020-07-30 02:21:15 (103 MB/s) - ‘sigma-align_1.1.3-6.dsc’ saved [2018/2018] Thu Jul 30 02:21:15 UTC 2020 I: sigma-align_1.1.3-6.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: sigma-align Binary: sigma-align Architecture: any Version: 1.1.3-6 Maintainer: Debian Med Packaging Team Uploaders: Charles Plessy , Andreas Tille Homepage: http://www.imsc.res.in/~rsidd/sigma/ Standards-Version: 4.2.1 Vcs-Browser: https://salsa.debian.org/med-team/sigma-align Vcs-Git: https://salsa.debian.org/med-team/sigma-align.git Build-Depends: debhelper (>= 11~), libglib2.0-dev Package-List: sigma-align deb science optional arch=any Checksums-Sha1: 38d77a438c2fd801144d78cd4418ded1f81438f3 129263 sigma-align_1.1.3.orig.tar.gz fe05d5faf0254b911532a1d8457d91d8bcf8e383 3204 sigma-align_1.1.3-6.debian.tar.xz Checksums-Sha256: e11deb2c184d96c263ed9129a063829d9872c47e6caa1675675faf1a02c44c91 129263 sigma-align_1.1.3.orig.tar.gz c34a6497bbc765cd4aa1a1f14ba891b7eb9d7aa4cd35921419bd126986d572c0 3204 sigma-align_1.1.3-6.debian.tar.xz Files: 36161cb7227b7c66e0c1a7a1b93aa81f 129263 sigma-align_1.1.3.orig.tar.gz 15dad3a6e6b9828c52c09c734a7b8b20 3204 sigma-align_1.1.3-6.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAlvJ2TMRHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtFsMQ//eaTj5H2hf8b/uxi8zjsVy8sGjZ88bEZX 9AA2bYMfgZtO8U+WPFD7haKOCgmfipVdbbPYKHoVcZihQYx2sDAlksGOaq4H9ysC ij/BTGpOF46TpInSnI4rycsJ3OZt03MW51lISxOm0yOGeiVdUKaEoPgebTQLagy4 vGrfa7flvVcH1ZLd1s/qixZUiLI40e0navra4T3dP4nSfQtbrvg5DUqxvWE0/etX e75KqGg0RHrNhNmUD2k0Tl2EY99fQOc+f9EdvEpEHy1GLV6UP7QvJWE1w1AdBvR8 xgOkF6mZQGIHy2h999eXe/msf8W+KVpRN4KRa544GNyuAJokSS09l1P9uD0OcUoy uroTS0NcYBk+89AlpG48Ywh5HS6bQSp40E6c2Rt5gq7Z6uwaTMaUQFQjKqvOAs4s O0V7obm9uZCgfkaNrUzaG4XlxpLI4V0vj5gJWInTpvHvOg747fTJ5nwrC2REwzXr vW2aRg6egvzwi6mkoN4KKn3DRWvFh0EPR/xf/5gOMVwTJAGAQUEoLx8GYN2eUQxn kBBq4OzuhAN86BKRvmfVTae16eoPZYkkmlVBD/63qfyovWOq2P4sSftehu/sPRvG iYcPOgFBEJ4w7fiD8q22XsdO/SQSCvKjesL9ObYdg65CCSvgS7iVnSq2DY3fwMyj u9ZFllqUffk= =uECo -----END PGP SIGNATURE----- Thu Jul 30 02:21:15 UTC 2020 I: Checking whether the package is not for us Thu Jul 30 02:21:15 UTC 2020 I: Starting 1st build on remote node ff4a-armhf-rb.debian.net. Thu Jul 30 02:21:15 UTC 2020 I: Preparing to do remote build '1' on ff4a-armhf-rb.debian.net. Thu Jul 30 02:22:51 UTC 2020 I: Deleting $TMPDIR on ff4a-armhf-rb.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Wed Jul 29 14:21:23 -12 2020 I: pbuilder-time-stamp: 1596075683 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/buster-reproducible-base.tgz] I: copying local configuration I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [sigma-align_1.1.3-6.dsc] I: copying [./sigma-align_1.1.3.orig.tar.gz] I: copying [./sigma-align_1.1.3-6.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/root/.gnupg/trustedkeys.kbx': General error gpgv: Signature made Fri Oct 19 01:16:35 2018 -12 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./sigma-align_1.1.3-6.dsc dpkg-source: info: extracting sigma-align in sigma-align-1.1.3 dpkg-source: info: unpacking sigma-align_1.1.3.orig.tar.gz dpkg-source: info: unpacking sigma-align_1.1.3-6.debian.tar.xz I: using fakeroot in build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/6829/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='armhf' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=3' DISTRIBUTION='' HOME='/root' HOST_ARCH='armhf' IFS=' ' INVOCATION_ID='2e79eac1eb174bb2a3d060e683a45e9f' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='6829' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.38NzuhswHi/pbuilderrc_RZGz --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/buster-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.38NzuhswHi/b1 --logfile b1/build.log sigma-align_1.1.3-6.dsc' SUDO_GID='111' SUDO_UID='107' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://10.0.0.15:8000/' I: uname -a Linux ff4a 4.19.0-9-armmp-lpae #1 SMP Debian 4.19.118-2+deb10u1 (2020-06-07) armv7l GNU/Linux I: ls -l /bin total 3328 -rwxr-xr-x 1 root root 767656 Apr 17 2019 bash -rwxr-xr-x 3 root root 26052 Jul 10 2019 bunzip2 -rwxr-xr-x 3 root root 26052 Jul 10 2019 bzcat lrwxrwxrwx 1 root root 6 Jul 10 2019 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2227 Jul 10 2019 bzdiff lrwxrwxrwx 1 root root 6 Jul 10 2019 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4877 Jun 24 2019 bzexe lrwxrwxrwx 1 root root 6 Jul 10 2019 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3641 Jul 10 2019 bzgrep -rwxr-xr-x 3 root root 26052 Jul 10 2019 bzip2 -rwxr-xr-x 1 root root 9636 Jul 10 2019 bzip2recover lrwxrwxrwx 1 root root 6 Jul 10 2019 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Jul 10 2019 bzmore -rwxr-xr-x 1 root root 22432 Feb 28 2019 cat -rwxr-xr-x 1 root root 38868 Feb 28 2019 chgrp -rwxr-xr-x 1 root root 38836 Feb 28 2019 chmod -rwxr-xr-x 1 root root 42972 Feb 28 2019 chown -rwxr-xr-x 1 root root 88376 Feb 28 2019 cp -rwxr-xr-x 1 root root 75516 Jan 17 2019 dash -rwxr-xr-x 1 root root 71648 Feb 28 2019 date -rwxr-xr-x 1 root root 51212 Feb 28 2019 dd -rwxr-xr-x 1 root root 55672 Feb 28 2019 df -rwxr-xr-x 1 root root 88444 Feb 28 2019 dir -rwxr-xr-x 1 root root 54872 Jan 9 2019 dmesg lrwxrwxrwx 1 root root 8 Sep 26 2018 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Sep 26 2018 domainname -> hostname -rwxr-xr-x 1 root root 22364 Feb 28 2019 echo -rwxr-xr-x 1 root root 28 Jan 7 2019 egrep -rwxr-xr-x 1 root root 18260 Feb 28 2019 false -rwxr-xr-x 1 root root 28 Jan 7 2019 fgrep -rwxr-xr-x 1 root root 47356 Jan 9 2019 findmnt -rwsr-xr-x 1 root root 21980 Apr 22 07:38 fusermount -rwxr-xr-x 1 root root 124508 Jan 7 2019 grep -rwxr-xr-x 2 root root 2345 Jan 5 2019 gunzip -rwxr-xr-x 1 root root 6375 Jan 5 2019 gzexe -rwxr-xr-x 1 root root 64232 Jan 5 2019 gzip -rwxr-xr-x 1 root root 13784 Sep 26 2018 hostname -rwxr-xr-x 1 root root 43044 Feb 28 2019 ln -rwxr-xr-x 1 root root 34932 Jul 26 2018 login -rwxr-xr-x 1 root root 88444 Feb 28 2019 ls -rwxr-xr-x 1 root root 67036 Jan 9 2019 lsblk -rwxr-xr-x 1 root root 47168 Feb 28 2019 mkdir -rwxr-xr-x 1 root root 43040 Feb 28 2019 mknod -rwxr-xr-x 1 root root 26552 Feb 28 2019 mktemp -rwxr-xr-x 1 root root 26024 Jan 9 2019 more -rwsr-xr-x 1 root root 34268 Jan 9 2019 mount -rwxr-xr-x 1 root root 9688 Jan 9 2019 mountpoint -rwxr-xr-x 1 root root 84284 Feb 28 2019 mv lrwxrwxrwx 1 root root 8 Sep 26 2018 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Feb 14 2019 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 22416 Feb 28 2019 pwd lrwxrwxrwx 1 root root 4 Apr 17 2019 rbash -> bash -rwxr-xr-x 1 root root 26504 Feb 28 2019 readlink -rwxr-xr-x 1 root root 42968 Feb 28 2019 rm -rwxr-xr-x 1 root root 26496 Feb 28 2019 rmdir -rwxr-xr-x 1 root root 14136 Jan 21 2019 run-parts -rwxr-xr-x 1 root root 76012 Dec 22 2018 sed lrwxrwxrwx 1 root root 4 Jul 28 20:25 sh -> dash -rwxr-xr-x 1 root root 22384 Feb 28 2019 sleep -rwxr-xr-x 1 root root 51124 Feb 28 2019 stty -rwsr-xr-x 1 root root 42472 Jan 9 2019 su -rwxr-xr-x 1 root root 22392 Feb 28 2019 sync -rwxr-xr-x 1 root root 283324 Apr 23 2019 tar -rwxr-xr-x 1 root root 9808 Jan 21 2019 tempfile -rwxr-xr-x 1 root root 63464 Feb 28 2019 touch -rwxr-xr-x 1 root root 18260 Feb 28 2019 true -rwxr-xr-x 1 root root 9636 Apr 22 07:38 ulockmgr_server -rwsr-xr-x 1 root root 21976 Jan 9 2019 umount -rwxr-xr-x 1 root root 22380 Feb 28 2019 uname -rwxr-xr-x 2 root root 2345 Jan 5 2019 uncompress -rwxr-xr-x 1 root root 88444 Feb 28 2019 vdir -rwxr-xr-x 1 root root 21980 Jan 9 2019 wdctl -rwxr-xr-x 1 root root 946 Jan 21 2019 which lrwxrwxrwx 1 root root 8 Sep 26 2018 ypdomainname -> hostname -rwxr-xr-x 1 root root 1983 Jan 5 2019 zcat -rwxr-xr-x 1 root root 1677 Jan 5 2019 zcmp -rwxr-xr-x 1 root root 5879 Jan 5 2019 zdiff -rwxr-xr-x 1 root root 29 Jan 5 2019 zegrep -rwxr-xr-x 1 root root 29 Jan 5 2019 zfgrep -rwxr-xr-x 1 root root 2080 Jan 5 2019 zforce -rwxr-xr-x 1 root root 7584 Jan 5 2019 zgrep -rwxr-xr-x 1 root root 2205 Jan 5 2019 zless -rwxr-xr-x 1 root root 1841 Jan 5 2019 zmore -rwxr-xr-x 1 root root 4552 Jan 5 2019 znew I: user script /srv/workspace/pbuilder/6829/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: armhf Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper (>= 11~), libglib2.0-dev dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 18932 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper (>= 11~); however: Package debhelper is not installed. pbuilder-satisfydepends-dummy depends on libglib2.0-dev; however: Package libglib2.0-dev is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdmainutils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libblkid-dev{a} libbsd0{a} libcroco3{a} libelf1{a} libexpat1{a} libffi-dev{a} libfile-stripnondeterminism-perl{a} libglib2.0-0{a} libglib2.0-bin{a} libglib2.0-data{a} libglib2.0-dev{a} libglib2.0-dev-bin{a} libicu63{a} libmagic-mgc{a} libmagic1{a} libmount-dev{a} libmpdec2{a} libncurses6{a} libpcre16-3{a} libpcre3-dev{a} libpcre32-3{a} libpcrecpp0v5{a} libpipeline1{a} libpython3-stdlib{a} libpython3.7-minimal{a} libpython3.7-stdlib{a} libreadline7{a} libselinux1-dev{a} libsepol1-dev{a} libsigsegv2{a} libssl1.1{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} mime-support{a} pkg-config{a} po-debconf{a} python3{a} python3-distutils{a} python3-lib2to3{a} python3-minimal{a} python3.7{a} python3.7-minimal{a} readline-common{a} sensible-utils{a} uuid-dev{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libgpm2 libltdl-dev libmail-sendmail-perl lynx shared-mime-info wget xdg-user-dirs 0 packages upgraded, 64 newly installed, 0 to remove and 0 not upgraded. Need to get 29.7 MB of archives. After unpacking 110 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian buster/main armhf libbsd0 armhf 0.9.1-2 [103 kB] Get: 2 http://deb.debian.org/debian buster/main armhf bsdmainutils armhf 11.1.2+b1 [186 kB] Get: 3 http://deb.debian.org/debian buster/main armhf libuchardet0 armhf 0.0.6-3 [62.2 kB] Get: 4 http://deb.debian.org/debian buster/main armhf groff-base armhf 1.22.4-3 [828 kB] Get: 5 http://deb.debian.org/debian buster/main armhf libpipeline1 armhf 1.5.1-2 [26.8 kB] Get: 6 http://deb.debian.org/debian buster/main armhf man-db armhf 2.8.5-2 [1240 kB] Get: 7 http://deb.debian.org/debian buster/main armhf libssl1.1 armhf 1.1.1d-0+deb10u3 [1299 kB] Get: 8 http://deb.debian.org/debian buster/main armhf libpython3.7-minimal armhf 3.7.3-2+deb10u1 [582 kB] Get: 9 http://deb.debian.org/debian buster/main armhf libexpat1 armhf 2.2.6-2+deb10u1 [78.0 kB] Get: 10 http://deb.debian.org/debian buster/main armhf python3.7-minimal armhf 3.7.3-2+deb10u1 [1465 kB] Get: 11 http://deb.debian.org/debian buster/main armhf python3-minimal armhf 3.7.3-1 [36.6 kB] Get: 12 http://deb.debian.org/debian buster/main armhf mime-support all 3.62 [37.2 kB] Get: 13 http://deb.debian.org/debian buster/main armhf libmpdec2 armhf 2.4.2-2 [69.3 kB] Get: 14 http://deb.debian.org/debian buster/main armhf readline-common all 7.0-5 [70.6 kB] Get: 15 http://deb.debian.org/debian buster/main armhf libreadline7 armhf 7.0-5 [131 kB] Get: 16 http://deb.debian.org/debian buster/main armhf libpython3.7-stdlib armhf 3.7.3-2+deb10u1 [1660 kB] Get: 17 http://deb.debian.org/debian buster/main armhf python3.7 armhf 3.7.3-2+deb10u1 [330 kB] Get: 18 http://deb.debian.org/debian buster/main armhf libpython3-stdlib armhf 3.7.3-1 [20.0 kB] Get: 19 http://deb.debian.org/debian buster/main armhf python3 armhf 3.7.3-1 [61.5 kB] Get: 20 http://deb.debian.org/debian buster/main armhf sensible-utils all 0.0.12 [15.8 kB] Get: 21 http://deb.debian.org/debian buster/main armhf libmagic-mgc armhf 1:5.35-4+deb10u1 [242 kB] Get: 22 http://deb.debian.org/debian buster/main armhf libmagic1 armhf 1:5.35-4+deb10u1 [110 kB] Get: 23 http://deb.debian.org/debian buster/main armhf file armhf 1:5.35-4+deb10u1 [65.5 kB] Get: 24 http://deb.debian.org/debian buster/main armhf gettext-base armhf 0.19.8.1-9 [118 kB] Get: 25 http://deb.debian.org/debian buster/main armhf libsigsegv2 armhf 2.12-2 [32.1 kB] Get: 26 http://deb.debian.org/debian buster/main armhf m4 armhf 1.4.18-2 [190 kB] Get: 27 http://deb.debian.org/debian buster/main armhf autoconf all 2.69-11 [341 kB] Get: 28 http://deb.debian.org/debian buster/main armhf autotools-dev all 20180224.1 [77.0 kB] Get: 29 http://deb.debian.org/debian buster/main armhf automake all 1:1.16.1-4 [771 kB] Get: 30 http://deb.debian.org/debian buster/main armhf autopoint all 0.19.8.1-9 [434 kB] Get: 31 http://deb.debian.org/debian buster/main armhf libtool all 2.4.6-9 [547 kB] Get: 32 http://deb.debian.org/debian buster/main armhf dh-autoreconf all 19 [16.9 kB] Get: 33 http://deb.debian.org/debian buster/main armhf libarchive-zip-perl all 1.64-1 [96.8 kB] Get: 34 http://deb.debian.org/debian buster/main armhf libfile-stripnondeterminism-perl all 1.1.2-1 [19.8 kB] Get: 35 http://deb.debian.org/debian buster/main armhf dh-strip-nondeterminism all 1.1.2-1 [13.0 kB] Get: 36 http://deb.debian.org/debian buster/main armhf libelf1 armhf 0.176-1.1 [158 kB] Get: 37 http://deb.debian.org/debian buster/main armhf dwz armhf 0.12-3 [72.0 kB] Get: 38 http://deb.debian.org/debian buster/main armhf libglib2.0-0 armhf 2.58.3-2+deb10u2 [1101 kB] Get: 39 http://deb.debian.org/debian buster/main armhf libicu63 armhf 63.1-6+deb10u1 [8005 kB] Get: 40 http://deb.debian.org/debian buster/main armhf libxml2 armhf 2.9.4+dfsg1-7+b3 [595 kB] Get: 41 http://deb.debian.org/debian buster/main armhf libcroco3 armhf 0.6.12-3 [133 kB] Get: 42 http://deb.debian.org/debian buster/main armhf libncurses6 armhf 6.1+20181013-2+deb10u2 [79.8 kB] Get: 43 http://deb.debian.org/debian buster/main armhf gettext armhf 0.19.8.1-9 [1242 kB] Get: 44 http://deb.debian.org/debian buster/main armhf intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get: 45 http://deb.debian.org/debian buster/main armhf po-debconf all 1.0.21 [248 kB] Get: 46 http://deb.debian.org/debian buster/main armhf debhelper all 12.1.1 [1016 kB] Get: 47 http://deb.debian.org/debian buster/main armhf uuid-dev armhf 2.33.1-0.1 [92.6 kB] Get: 48 http://deb.debian.org/debian buster/main armhf libblkid-dev armhf 2.33.1-0.1 [217 kB] Get: 49 http://deb.debian.org/debian buster/main armhf libffi-dev armhf 3.2.1-9 [154 kB] Get: 50 http://deb.debian.org/debian buster/main armhf libglib2.0-data all 2.58.3-2+deb10u2 [1110 kB] Get: 51 http://deb.debian.org/debian buster/main armhf libglib2.0-bin armhf 2.58.3-2+deb10u2 [119 kB] Get: 52 http://deb.debian.org/debian buster/main armhf python3-lib2to3 all 3.7.3-1 [76.7 kB] Get: 53 http://deb.debian.org/debian buster/main armhf python3-distutils all 3.7.3-1 [142 kB] Get: 54 http://deb.debian.org/debian buster/main armhf libglib2.0-dev-bin armhf 2.58.3-2+deb10u2 [155 kB] Get: 55 http://deb.debian.org/debian buster/main armhf libmount-dev armhf 2.33.1-0.1 [223 kB] Get: 56 http://deb.debian.org/debian buster/main armhf libpcre16-3 armhf 2:8.39-12 [238 kB] Get: 57 http://deb.debian.org/debian buster/main armhf libpcre32-3 armhf 2:8.39-12 [231 kB] Get: 58 http://deb.debian.org/debian buster/main armhf libpcrecpp0v5 armhf 2:8.39-12 [150 kB] Get: 59 http://deb.debian.org/debian buster/main armhf libpcre3-dev armhf 2:8.39-12 [585 kB] Get: 60 http://deb.debian.org/debian buster/main armhf libsepol1-dev armhf 2.8-1 [318 kB] Get: 61 http://deb.debian.org/debian buster/main armhf libselinux1-dev armhf 2.8-1+b1 [162 kB] Get: 62 http://deb.debian.org/debian buster/main armhf pkg-config armhf 0.29-6 [60.7 kB] Get: 63 http://deb.debian.org/debian buster/main armhf zlib1g-dev armhf 1:1.2.11.dfsg-1 [207 kB] Get: 64 http://deb.debian.org/debian buster/main armhf libglib2.0-dev armhf 2.58.3-2+deb10u2 [1386 kB] Fetched 29.7 MB in 3s (8918 kB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libbsd0:armhf. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 18932 files and directories currently installed.) Preparing to unpack .../0-libbsd0_0.9.1-2_armhf.deb ... Unpacking libbsd0:armhf (0.9.1-2) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../1-bsdmainutils_11.1.2+b1_armhf.deb ... Unpacking bsdmainutils (11.1.2+b1) ... Selecting previously unselected package libuchardet0:armhf. Preparing to unpack .../2-libuchardet0_0.0.6-3_armhf.deb ... 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Setting up libglib2.0-data (2.58.3-2+deb10u2) ... Setting up uuid-dev:armhf (2.33.1-0.1) ... Setting up libncurses6:armhf (6.1+20181013-2+deb10u2) ... Setting up libsigsegv2:armhf (2.12-2) ... Setting up libpcre32-3:armhf (2:8.39-12) ... Setting up autopoint (0.19.8.1-9) ... Setting up pkg-config (0.29-6) ... Setting up zlib1g-dev:armhf (1:1.2.11.dfsg-1) ... Setting up sensible-utils (0.0.12) ... Setting up libuchardet0:armhf (0.0.6-3) ... Setting up libmpdec2:armhf (2.4.2-2) ... Setting up libbsd0:armhf (0.9.1-2) ... Setting up libelf1:armhf (0.176-1.1) ... Setting up readline-common (7.0-5) ... Setting up libxml2:armhf (2.9.4+dfsg1-7+b3) ... Setting up libreadline7:armhf (7.0-5) ... Setting up libfile-stripnondeterminism-perl (1.1.2-1) ... Setting up libblkid-dev:armhf (2.33.1-0.1) ... Setting up libpython3.7-stdlib:armhf (3.7.3-2+deb10u1) ... Setting up libtool (2.4.6-9) ... Setting up libpcre3-dev:armhf (2:8.39-12) ... Setting up libglib2.0-bin (2.58.3-2+deb10u2) ... Setting up m4 (1.4.18-2) ... Setting up bsdmainutils (11.1.2+b1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libcroco3:armhf (0.6.12-3) ... Setting up autoconf (2.69-11) ... Setting up dwz (0.12-3) ... Setting up groff-base (1.22.4-3) ... Setting up libmount-dev:armhf (2.33.1-0.1) ... Setting up libpython3-stdlib:armhf (3.7.3-1) ... Setting up automake (1:1.16.1-4) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up python3.7 (3.7.3-2+deb10u1) ... Setting up gettext (0.19.8.1-9) ... Setting up libselinux1-dev:armhf (2.8-1+b1) ... Setting up python3 (3.7.3-1) ... Setting up man-db (2.8.5-2) ... Not building database; man-db/auto-update is not 'true'. Setting up intltool-debian (0.35.0+20060710.5) ... Setting up python3-lib2to3 (3.7.3-1) ... Setting up python3-distutils (3.7.3-1) ... Setting up libglib2.0-dev-bin (2.58.3-2+deb10u2) ... Setting up po-debconf (1.0.21) ... Setting up libglib2.0-dev:armhf (2.58.3-2+deb10u2) ... Setting up dh-autoreconf (19) ... Setting up debhelper (12.1.1) ... Setting up dh-strip-nondeterminism (1.1.2-1) ... Processing triggers for libc-bin (2.28-10) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps Reading package lists... Building dependency tree... Reading state information... fakeroot is already the newest version (1.23-1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package I: Running cd /build/sigma-align-1.1.3/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b dpkg-buildpackage: info: source package sigma-align dpkg-buildpackage: info: source version 1.1.3-6 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf fakeroot debian/rules clean dh clean dh_clean debian/rules build dh build dh_update_autotools_config dh_autoreconf configure.ac:6: warning: AM_INIT_AUTOMAKE: two- and three-arguments forms are deprecated. For more info, see: configure.ac:6: https://www.gnu.org/software/automake/manual/automake.html#Modernize-AM_005fINIT_005fAUTOMAKE-invocation configure.ac:9: installing './compile' dh_auto_configure ./configure --build=arm-linux-gnueabihf --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-silent-rules --libdir=\${prefix}/lib/arm-linux-gnueabihf --libexecdir=\${prefix}/lib/arm-linux-gnueabihf --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking configure: WARNING: unrecognized options: --disable-maintainer-mode checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking whether gcc understands -c and -o together... yes checking whether make supports the include directive... yes (GNU style) checking dependency style of gcc... none checking for main in -lm... yes checking for pkg-config... /usr/bin/pkg-config checking pkg-config is at least version 0.9.0... yes checking for DEPS... yes checking how to run the C preprocessor... gcc -E checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking sys/time.h usability... yes checking sys/time.h presence... yes checking for sys/time.h... yes checking glib.h usability... yes checking glib.h presence... yes checking for glib.h... yes checking for an ANSI C-conforming const... yes checking for size_t... yes checking whether time.h and sys/time.h may both be included... yes checking for stdlib.h... (cached) yes checking for GNU libc compatible malloc... yes checking for gettimeofday... yes checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating src/Makefile config.status: creating config.h config.status: executing depfiles commands configure: WARNING: unrecognized options: --disable-maintainer-mode dh_auto_build make -j3 make[1]: Entering directory '/build/sigma-align-1.1.3' make all-recursive make[2]: Entering directory '/build/sigma-align-1.1.3' Making all in src make[3]: Entering directory '/build/sigma-align-1.1.3/src' gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DDEBUG -O2 -g -g -O2 -ffile-prefix-map=/build/sigma-align-1.1.3=. -fstack-protector-strong -Wformat -Werror=format-security -c -o main.o main.c gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DDEBUG -O2 -g -g -O2 -ffile-prefix-map=/build/sigma-align-1.1.3=. -fstack-protector-strong -Wformat -Werror=format-security -c -o parseopts.o parseopts.c gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DDEBUG -O2 -g -g -O2 -ffile-prefix-map=/build/sigma-align-1.1.3=. -fstack-protector-strong -Wformat -Werror=format-security -c -o readfasta.o readfasta.c gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DDEBUG -O2 -g -g -O2 -ffile-prefix-map=/build/sigma-align-1.1.3=. -fstack-protector-strong -Wformat -Werror=format-security -c -o getbgprobs.o getbgprobs.c gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DDEBUG -O2 -g -g -O2 -ffile-prefix-map=/build/sigma-align-1.1.3=. -fstack-protector-strong -Wformat -Werror=format-security -c -o setbgprobs.o setbgprobs.c gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DDEBUG -O2 -g -g -O2 -ffile-prefix-map=/build/sigma-align-1.1.3=. -fstack-protector-strong -Wformat -Werror=format-security -c -o initseqfrags.o initseqfrags.c gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DDEBUG -O2 -g -g -O2 -ffile-prefix-map=/build/sigma-align-1.1.3=. -fstack-protector-strong -Wformat -Werror=format-security -c -o commonroutines.o commonroutines.c gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DDEBUG -O2 -g -g -O2 -ffile-prefix-map=/build/sigma-align-1.1.3=. -fstack-protector-strong -Wformat -Werror=format-security -c -o setbgw.o setbgw.c gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DDEBUG -O2 -g -g -O2 -ffile-prefix-map=/build/sigma-align-1.1.3=. -fstack-protector-strong -Wformat -Werror=format-security -c -o printhelp.o printhelp.c gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DDEBUG -O2 -g -g -O2 -ffile-prefix-map=/build/sigma-align-1.1.3=. -fstack-protector-strong -Wformat -Werror=format-security -c -o blockseq.o blockseq.c gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DDEBUG -O2 -g -g -O2 -ffile-prefix-map=/build/sigma-align-1.1.3=. -fstack-protector-strong -Wformat -Werror=format-security -c -o assemble_frags_to_seqs.o assemble_frags_to_seqs.c gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DDEBUG -O2 -g -g -O2 -ffile-prefix-map=/build/sigma-align-1.1.3=. -fstack-protector-strong -Wformat -Werror=format-security -c -o print_routines.o print_routines.c gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DDEBUG -O2 -g -g -O2 -ffile-prefix-map=/build/sigma-align-1.1.3=. -fstack-protector-strong -Wformat -Werror=format-security -c -o getopt_long.o getopt_long.c getopt_long.c: In function 'getopt_internal': getopt_long.c:295:4: warning: implicit declaration of function 'warnx' [-Wimplicit-function-declaration] warnx(illoptchar, optchar); ^~~~~ gcc -I/usr/include/glib-2.0 -I/usr/lib/arm-linux-gnueabihf/glib-2.0/include -DDEBUG -O2 -g -g -O2 -ffile-prefix-map=/build/sigma-align-1.1.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -o sigma main.o parseopts.o readfasta.o getbgprobs.o setbgprobs.o initseqfrags.o commonroutines.o setbgw.o printhelp.o blockseq.o assemble_frags_to_seqs.o print_routines.o getopt_long.o -lglib-2.0 -lm make[3]: Leaving directory '/build/sigma-align-1.1.3/src' make[3]: Entering directory '/build/sigma-align-1.1.3' make[3]: Leaving directory '/build/sigma-align-1.1.3' make[2]: Leaving directory '/build/sigma-align-1.1.3' make[1]: Leaving directory '/build/sigma-align-1.1.3' dh_auto_test make -j3 check VERBOSE=1 make[1]: Entering directory '/build/sigma-align-1.1.3' Making check in src make[2]: Entering directory '/build/sigma-align-1.1.3/src' make[2]: Nothing to be done for 'check'. make[2]: Leaving directory '/build/sigma-align-1.1.3/src' make[2]: Entering directory '/build/sigma-align-1.1.3' make[2]: Leaving directory '/build/sigma-align-1.1.3' make[1]: Leaving directory '/build/sigma-align-1.1.3' create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary dh binary dh_testroot dh_prep dh_auto_install make -j3 install DESTDIR=/build/sigma-align-1.1.3/debian/sigma-align AM_UPDATE_INFO_DIR=no make[1]: Entering directory '/build/sigma-align-1.1.3' Making install in src make[2]: Entering directory '/build/sigma-align-1.1.3/src' make[3]: Entering directory '/build/sigma-align-1.1.3/src' make[3]: Nothing to be done for 'install-data-am'. /bin/mkdir -p '/build/sigma-align-1.1.3/debian/sigma-align/usr/bin' /usr/bin/install -c sigma '/build/sigma-align-1.1.3/debian/sigma-align/usr/bin' make[3]: Leaving directory '/build/sigma-align-1.1.3/src' make[2]: Leaving directory '/build/sigma-align-1.1.3/src' make[2]: Entering directory '/build/sigma-align-1.1.3' make[3]: Entering directory '/build/sigma-align-1.1.3' make[3]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/build/sigma-align-1.1.3/debian/sigma-align/usr/share/man/man1' /usr/bin/install -c -m 644 sigma.1 '/build/sigma-align-1.1.3/debian/sigma-align/usr/share/man/man1' make[3]: Leaving directory '/build/sigma-align-1.1.3' make[2]: Leaving directory '/build/sigma-align-1.1.3' make[1]: Leaving directory '/build/sigma-align-1.1.3' dh_installdocs dh_installchangelogs dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_strip dh_makeshlibs dh_shlibdeps dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'sigma-align' in '../sigma-align_1.1.3-6_armhf.deb'. dpkg-deb: building package 'sigma-align-dbgsym' in '../sigma-align-dbgsym_1.1.3-6_armhf.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../sigma-align_1.1.3-6_armhf.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/6829 and its subdirectories I: Current time: Wed Jul 29 14:22:46 -12 2020 I: pbuilder-time-stamp: 1596075766 Thu Jul 30 02:22:53 UTC 2020 I: 1st build successful. Starting 2nd build on remote node jtk1a-armhf-rb.debian.net. Thu Jul 30 02:22:53 UTC 2020 I: Preparing to do remote build '2' on jtk1a-armhf-rb.debian.net. Thu Jul 30 02:28:01 UTC 2020 I: Deleting $TMPDIR on jtk1a-armhf-rb.debian.net. Thu Jul 30 02:28:03 UTC 2020 I: sigma-align_1.1.3-6_armhf.changes: Format: 1.8 Date: Fri, 19 Oct 2018 15:14:00 +0200 Source: sigma-align Binary: sigma-align sigma-align-dbgsym Architecture: armhf Version: 1.1.3-6 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: sigma-align - Simple greedy multiple alignment of non-coding DNA sequences Changes: sigma-align (1.1.3-6) unstable; urgency=medium . * debhelper 11 * Point Vcs fields to salsa.debian.org * Standards-Version: 4.2.1 Checksums-Sha1: df44fb53a60129f28d6cc947a2342951aea94d12 54716 sigma-align-dbgsym_1.1.3-6_armhf.deb dc00d9ea29b338746eb673ec2136ee05a9d098e3 5528 sigma-align_1.1.3-6_armhf.buildinfo 5a2fff0cdc5b521329fa2012046af37235485116 21156 sigma-align_1.1.3-6_armhf.deb Checksums-Sha256: 77f407ac6c5dcfe3826d639a3e64dfb9bac338b1c16131233fc8530bda5162bb 54716 sigma-align-dbgsym_1.1.3-6_armhf.deb 258a87ca6867166dca3ac4c93bccddd32a0d4812fc0e48b5c710c52e52f54462 5528 sigma-align_1.1.3-6_armhf.buildinfo 308abec6508c94615e079136a5b3a6ad30ab06b101c77e36895b57162c645759 21156 sigma-align_1.1.3-6_armhf.deb Files: 57f8207024960da1ca296c655f7dc1aa 54716 debug optional sigma-align-dbgsym_1.1.3-6_armhf.deb e783bc3142ecf3477c2573b3f55af283 5528 science optional sigma-align_1.1.3-6_armhf.buildinfo 53f5405ac35b8ba373a4b3ef9cf1af07 21156 science optional sigma-align_1.1.3-6_armhf.deb Thu Jul 30 02:28:06 UTC 2020 I: diffoscope 153 will be used to compare the two builds: # Profiling output for: /usr/bin/diffoscope --html /srv/reproducible-results/rbuild-debian/tmp.38NzuhswHi/sigma-align_1.1.3-6.diffoscope.html --text /srv/reproducible-results/rbuild-debian/tmp.38NzuhswHi/sigma-align_1.1.3-6.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/tmp.38NzuhswHi/sigma-align_1.1.3-6.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/tmp.38NzuhswHi/b1/sigma-align_1.1.3-6_armhf.changes /srv/reproducible-results/rbuild-debian/tmp.38NzuhswHi/b2/sigma-align_1.1.3-6_armhf.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.302s) 0.302s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.031s) 0.031s 10 calls diffoscope.comparators.binary.FilesystemFile 0.000s 8 calls abc.DotChangesFile Thu Jul 30 02:31:11 UTC 2020 I: diffoscope 153 found no differences in the changes files, and a .buildinfo file also exists. Thu Jul 30 02:31:11 UTC 2020 I: sigma-align from buster built successfully and reproducibly on armhf. Thu Jul 30 02:31:12 UTC 2020 I: Submitting .buildinfo files to external archives: Thu Jul 30 02:31:12 UTC 2020 I: Submitting 8.0K b1/sigma-align_1.1.3-6_armhf.buildinfo.asc Thu Jul 30 02:31:14 UTC 2020 I: Submitting 8.0K b2/sigma-align_1.1.3-6_armhf.buildinfo.asc Thu Jul 30 02:31:15 UTC 2020 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Thu Jul 30 02:31:15 UTC 2020 I: Done submitting .buildinfo files. Thu Jul 30 02:31:15 UTC 2020 I: Removing signed sigma-align_1.1.3-6_armhf.buildinfo.asc files: removed './b1/sigma-align_1.1.3-6_armhf.buildinfo.asc' removed './b2/sigma-align_1.1.3-6_armhf.buildinfo.asc'