Tue Jul 7 21:30:41 UTC 2020 I: starting to build pscan-tfbs/buster/armhf on jenkins on '2020-07-07 21:30' Tue Jul 7 21:30:41 UTC 2020 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/armhf_7/4849/console.log Tue Jul 7 21:30:42 UTC 2020 I: Downloading source for buster/pscan-tfbs=1.2.2-3 --2020-07-07 21:30:42-- http://deb.debian.org/debian/pool/main/p/pscan-tfbs/pscan-tfbs_1.2.2-3.dsc Connecting to 78.137.99.97:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 1960 (1.9K) Saving to: ‘pscan-tfbs_1.2.2-3.dsc’ 0K . 100% 255M=0s 2020-07-07 21:30:42 (255 MB/s) - ‘pscan-tfbs_1.2.2-3.dsc’ saved [1960/1960] Tue Jul 7 21:30:42 UTC 2020 I: pscan-tfbs_1.2.2-3.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: pscan-tfbs Binary: pscan-tfbs Architecture: any Version: 1.2.2-3 Maintainer: Debian Med Packaging Team Uploaders: Steffen Moeller Homepage: http://www.beaconlab.it/pscan Standards-Version: 4.3.0 Vcs-Browser: https://salsa.debian.org/med-team/pscan-tfbs Vcs-Git: https://salsa.debian.org/med-team/pscan-tfbs.git Build-Depends: debhelper (>= 10), libgsl-dev Package-List: pscan-tfbs deb science optional arch=any Checksums-Sha1: dc21000a65c639595f66fc4f53cab3a95b7646f6 42948 pscan-tfbs_1.2.2.orig.tar.gz 4868df89d3b56e5757f3f95cf26273885fa73af1 5800 pscan-tfbs_1.2.2-3.debian.tar.xz Checksums-Sha256: b59cac9effcad6ab286372a95e81a57a226ceb2a4a267ffa93bc084467fdf92b 42948 pscan-tfbs_1.2.2.orig.tar.gz 751f51cacf59cb9e5b9ae14976e907e235dfa50a8cd8a3b15810c71dbb8fb0fc 5800 pscan-tfbs_1.2.2-3.debian.tar.xz Files: 33d4f841fdcfadf63b238b61adc536a2 42948 pscan-tfbs_1.2.2.orig.tar.gz 85bb9b9dcf37221b62049892b2cf811c 5800 pscan-tfbs_1.2.2-3.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAlz/kVURHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtF+jw/8CmuNjr4KrW76qxf6Bi4RQFuRmjo8a+Fs wXR+yXgFQLrNNMW4qO4AidywLHyQxn9uTW/ziCOK0746angYn7HP3VhxGZGsB7eX rcDGGvroYsH1ZQJrBQU3R3PPq6aTf/FC9tdjB85qIOzyF01gJzVACasjNwGINQMl A3sDB9SQvuOXNaG0anWfZeS1p4dWskrIFbfmlUCBdi0iiF5iynY18x9AmIkSAmK/ KVGnvZgEarwmUHQHyn9ZnzvygpVWa4LSduXn1SPz30gOVDJU8YXI+ofKGclYQNwu xVBnEYNXEgCPegMXXtgNji47gwkMyVK6B9gM91Ge8J1ZU/bYcF5JeucbknOwRaY+ GACmCeuXMxINpRkV53QYT6F5gqiFUHCvVgKhLfckU+qQGr5HNAulD+x6eHltiDd8 ssZRGf/3OAE3GKfHR+/Q3ojQNv+WOJRTpyrhXVHUh/JdJNKkZYaXBRbQxG5W7IOD ejUMjTlYXobfj6mP8aT9OVNTE/FPFxnO8LnaVQ0RPGTodlQKJx6ZnVC8Lpmz+o2F QNh+qHuzO9fMmbTa2XAL6imcAir40lJ8eM81pO4gs2Txdm9sxFZ6E/7yaYSLMVKd G7Djl+MfAUsPyIkSatl8LApZOgd8K3xtViLwTqon4DHySP5soPus4BhHm4ukQS+G KrFSqoESxkQ= =6EVz -----END PGP SIGNATURE----- Tue Jul 7 21:30:42 UTC 2020 I: Checking whether the package is not for us Tue Jul 7 21:30:42 UTC 2020 I: Starting 1st build on remote node ff4a-armhf-rb.debian.net. Tue Jul 7 21:30:42 UTC 2020 I: Preparing to do remote build '1' on ff4a-armhf-rb.debian.net. Tue Jul 7 21:34:42 UTC 2020 I: Deleting $TMPDIR on ff4a-armhf-rb.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Tue Jul 7 09:30:51 -12 2020 I: pbuilder-time-stamp: 1594157451 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/buster-reproducible-base.tgz] I: copying local configuration I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [pscan-tfbs_1.2.2-3.dsc] I: copying [./pscan-tfbs_1.2.2.orig.tar.gz] I: copying [./pscan-tfbs_1.2.2-3.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/root/.gnupg/trustedkeys.kbx': General error gpgv: Signature made Mon Jun 10 23:32:37 2019 -12 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./pscan-tfbs_1.2.2-3.dsc dpkg-source: info: extracting pscan-tfbs in pscan-tfbs-1.2.2 dpkg-source: info: unpacking pscan-tfbs_1.2.2.orig.tar.gz dpkg-source: info: unpacking pscan-tfbs_1.2.2-3.debian.tar.xz I: using fakeroot in build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/16583/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='armhf' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=3' DISTRIBUTION='' HOME='/root' HOST_ARCH='armhf' IFS=' ' INVOCATION_ID='fab7fa9c82e04463903381ecac348105' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='16583' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.pfaFZDZM2V/pbuilderrc_A0UB --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/buster-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.pfaFZDZM2V/b1 --logfile b1/build.log pscan-tfbs_1.2.2-3.dsc' SUDO_GID='111' SUDO_UID='107' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://10.0.0.15:8000/' I: uname -a Linux ff4a 4.19.0-9-armmp-lpae #1 SMP Debian 4.19.118-2+deb10u1 (2020-06-07) armv7l GNU/Linux I: ls -l /bin total 3328 -rwxr-xr-x 1 root root 767656 Apr 17 2019 bash -rwxr-xr-x 3 root root 26052 Jul 10 2019 bunzip2 -rwxr-xr-x 3 root root 26052 Jul 10 2019 bzcat lrwxrwxrwx 1 root root 6 Jul 10 2019 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2227 Jul 10 2019 bzdiff lrwxrwxrwx 1 root root 6 Jul 10 2019 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4877 Jun 24 2019 bzexe lrwxrwxrwx 1 root root 6 Jul 10 2019 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3641 Jul 10 2019 bzgrep -rwxr-xr-x 3 root root 26052 Jul 10 2019 bzip2 -rwxr-xr-x 1 root root 9636 Jul 10 2019 bzip2recover lrwxrwxrwx 1 root root 6 Jul 10 2019 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Jul 10 2019 bzmore -rwxr-xr-x 1 root root 22432 Feb 28 2019 cat -rwxr-xr-x 1 root root 38868 Feb 28 2019 chgrp -rwxr-xr-x 1 root root 38836 Feb 28 2019 chmod -rwxr-xr-x 1 root root 42972 Feb 28 2019 chown -rwxr-xr-x 1 root root 88376 Feb 28 2019 cp -rwxr-xr-x 1 root root 75516 Jan 17 2019 dash -rwxr-xr-x 1 root root 71648 Feb 28 2019 date -rwxr-xr-x 1 root root 51212 Feb 28 2019 dd -rwxr-xr-x 1 root root 55672 Feb 28 2019 df -rwxr-xr-x 1 root root 88444 Feb 28 2019 dir -rwxr-xr-x 1 root root 54872 Jan 9 2019 dmesg lrwxrwxrwx 1 root root 8 Sep 26 2018 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Sep 26 2018 domainname -> hostname -rwxr-xr-x 1 root root 22364 Feb 28 2019 echo -rwxr-xr-x 1 root root 28 Jan 7 2019 egrep -rwxr-xr-x 1 root root 18260 Feb 28 2019 false -rwxr-xr-x 1 root root 28 Jan 7 2019 fgrep -rwxr-xr-x 1 root root 47356 Jan 9 2019 findmnt -rwsr-xr-x 1 root root 21980 Apr 22 07:38 fusermount -rwxr-xr-x 1 root root 124508 Jan 7 2019 grep -rwxr-xr-x 2 root root 2345 Jan 5 2019 gunzip -rwxr-xr-x 1 root root 6375 Jan 5 2019 gzexe -rwxr-xr-x 1 root root 64232 Jan 5 2019 gzip -rwxr-xr-x 1 root root 13784 Sep 26 2018 hostname -rwxr-xr-x 1 root root 43044 Feb 28 2019 ln -rwxr-xr-x 1 root root 34932 Jul 26 2018 login -rwxr-xr-x 1 root root 88444 Feb 28 2019 ls -rwxr-xr-x 1 root root 67036 Jan 9 2019 lsblk -rwxr-xr-x 1 root root 47168 Feb 28 2019 mkdir -rwxr-xr-x 1 root root 43040 Feb 28 2019 mknod -rwxr-xr-x 1 root root 26552 Feb 28 2019 mktemp -rwxr-xr-x 1 root root 26024 Jan 9 2019 more -rwsr-xr-x 1 root root 34268 Jan 9 2019 mount -rwxr-xr-x 1 root root 9688 Jan 9 2019 mountpoint -rwxr-xr-x 1 root root 84284 Feb 28 2019 mv lrwxrwxrwx 1 root root 8 Sep 26 2018 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Feb 14 2019 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 22416 Feb 28 2019 pwd lrwxrwxrwx 1 root root 4 Apr 17 2019 rbash -> bash -rwxr-xr-x 1 root root 26504 Feb 28 2019 readlink -rwxr-xr-x 1 root root 42968 Feb 28 2019 rm -rwxr-xr-x 1 root root 26496 Feb 28 2019 rmdir -rwxr-xr-x 1 root root 14136 Jan 21 2019 run-parts -rwxr-xr-x 1 root root 76012 Dec 22 2018 sed lrwxrwxrwx 1 root root 4 Jul 6 20:26 sh -> dash -rwxr-xr-x 1 root root 22384 Feb 28 2019 sleep -rwxr-xr-x 1 root root 51124 Feb 28 2019 stty -rwsr-xr-x 1 root root 42472 Jan 9 2019 su -rwxr-xr-x 1 root root 22392 Feb 28 2019 sync -rwxr-xr-x 1 root root 283324 Apr 23 2019 tar -rwxr-xr-x 1 root root 9808 Jan 21 2019 tempfile -rwxr-xr-x 1 root root 63464 Feb 28 2019 touch -rwxr-xr-x 1 root root 18260 Feb 28 2019 true -rwxr-xr-x 1 root root 9636 Apr 22 07:38 ulockmgr_server -rwsr-xr-x 1 root root 21976 Jan 9 2019 umount -rwxr-xr-x 1 root root 22380 Feb 28 2019 uname -rwxr-xr-x 2 root root 2345 Jan 5 2019 uncompress -rwxr-xr-x 1 root root 88444 Feb 28 2019 vdir -rwxr-xr-x 1 root root 21980 Jan 9 2019 wdctl -rwxr-xr-x 1 root root 946 Jan 21 2019 which lrwxrwxrwx 1 root root 8 Sep 26 2018 ypdomainname -> hostname -rwxr-xr-x 1 root root 1983 Jan 5 2019 zcat -rwxr-xr-x 1 root root 1677 Jan 5 2019 zcmp -rwxr-xr-x 1 root root 5879 Jan 5 2019 zdiff -rwxr-xr-x 1 root root 29 Jan 5 2019 zegrep -rwxr-xr-x 1 root root 29 Jan 5 2019 zfgrep -rwxr-xr-x 1 root root 2080 Jan 5 2019 zforce -rwxr-xr-x 1 root root 7584 Jan 5 2019 zgrep -rwxr-xr-x 1 root root 2205 Jan 5 2019 zless -rwxr-xr-x 1 root root 1841 Jan 5 2019 zmore -rwxr-xr-x 1 root root 4552 Jan 5 2019 znew I: user script /srv/workspace/pbuilder/16583/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: armhf Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper (>= 10), libgsl-dev dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 18932 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper (>= 10); however: Package debhelper is not installed. pbuilder-satisfydepends-dummy depends on libgsl-dev; however: Package libgsl-dev is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdmainutils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libbsd0{a} libcroco3{a} libelf1{a} libfile-stripnondeterminism-perl{a} libglib2.0-0{a} libgsl-dev{a} libgsl23{a} libgslcblas0{a} libicu63{a} libmagic-mgc{a} libmagic1{a} libncurses6{a} libpipeline1{a} libsigsegv2{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libglib2.0-data libgpm2 libltdl-dev libmail-sendmail-perl lynx shared-mime-info wget xdg-user-dirs 0 packages upgraded, 36 newly installed, 0 to remove and 0 not upgraded. Need to get 19.9 MB of archives. After unpacking 70.1 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian buster/main armhf libbsd0 armhf 0.9.1-2 [103 kB] Get: 2 http://deb.debian.org/debian buster/main armhf bsdmainutils armhf 11.1.2+b1 [186 kB] Get: 3 http://deb.debian.org/debian buster/main armhf libuchardet0 armhf 0.0.6-3 [62.2 kB] Get: 4 http://deb.debian.org/debian buster/main armhf groff-base armhf 1.22.4-3 [828 kB] Get: 5 http://deb.debian.org/debian buster/main armhf libpipeline1 armhf 1.5.1-2 [26.8 kB] Get: 6 http://deb.debian.org/debian buster/main armhf man-db armhf 2.8.5-2 [1240 kB] Get: 7 http://deb.debian.org/debian buster/main armhf sensible-utils all 0.0.12 [15.8 kB] Get: 8 http://deb.debian.org/debian buster/main armhf libmagic-mgc armhf 1:5.35-4+deb10u1 [242 kB] Get: 9 http://deb.debian.org/debian buster/main armhf libmagic1 armhf 1:5.35-4+deb10u1 [110 kB] Get: 10 http://deb.debian.org/debian buster/main armhf file armhf 1:5.35-4+deb10u1 [65.5 kB] Get: 11 http://deb.debian.org/debian buster/main armhf gettext-base armhf 0.19.8.1-9 [118 kB] Get: 12 http://deb.debian.org/debian buster/main armhf libsigsegv2 armhf 2.12-2 [32.1 kB] Get: 13 http://deb.debian.org/debian buster/main armhf m4 armhf 1.4.18-2 [190 kB] Get: 14 http://deb.debian.org/debian buster/main armhf autoconf all 2.69-11 [341 kB] Get: 15 http://deb.debian.org/debian buster/main armhf autotools-dev all 20180224.1 [77.0 kB] Get: 16 http://deb.debian.org/debian buster/main armhf automake all 1:1.16.1-4 [771 kB] Get: 17 http://deb.debian.org/debian buster/main armhf autopoint all 0.19.8.1-9 [434 kB] Get: 18 http://deb.debian.org/debian buster/main armhf libtool all 2.4.6-9 [547 kB] Get: 19 http://deb.debian.org/debian buster/main armhf dh-autoreconf all 19 [16.9 kB] Get: 20 http://deb.debian.org/debian buster/main armhf libarchive-zip-perl all 1.64-1 [96.8 kB] Get: 21 http://deb.debian.org/debian buster/main armhf libfile-stripnondeterminism-perl all 1.1.2-1 [19.8 kB] Get: 22 http://deb.debian.org/debian buster/main armhf dh-strip-nondeterminism all 1.1.2-1 [13.0 kB] Get: 23 http://deb.debian.org/debian buster/main armhf libelf1 armhf 0.176-1.1 [158 kB] Get: 24 http://deb.debian.org/debian buster/main armhf dwz armhf 0.12-3 [72.0 kB] Get: 25 http://deb.debian.org/debian buster/main armhf libglib2.0-0 armhf 2.58.3-2+deb10u2 [1101 kB] Get: 26 http://deb.debian.org/debian buster/main armhf libicu63 armhf 63.1-6+deb10u1 [8005 kB] Get: 27 http://deb.debian.org/debian buster/main armhf libxml2 armhf 2.9.4+dfsg1-7+b3 [595 kB] Get: 28 http://deb.debian.org/debian buster/main armhf libcroco3 armhf 0.6.12-3 [133 kB] Get: 29 http://deb.debian.org/debian buster/main armhf libncurses6 armhf 6.1+20181013-2+deb10u2 [79.8 kB] Get: 30 http://deb.debian.org/debian buster/main armhf gettext armhf 0.19.8.1-9 [1242 kB] Get: 31 http://deb.debian.org/debian buster/main armhf intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get: 32 http://deb.debian.org/debian buster/main armhf po-debconf all 1.0.21 [248 kB] Get: 33 http://deb.debian.org/debian buster/main armhf debhelper all 12.1.1 [1016 kB] Get: 34 http://deb.debian.org/debian buster/main armhf libgslcblas0 armhf 2.5+dfsg-6 [79.1 kB] Get: 35 http://deb.debian.org/debian buster/main armhf libgsl23 armhf 2.5+dfsg-6 [718 kB] Get: 36 http://deb.debian.org/debian buster/main armhf libgsl-dev armhf 2.5+dfsg-6 [903 kB] Fetched 19.9 MB in 3s (7244 kB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libbsd0:armhf. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 18932 files and directories currently installed.) Preparing to unpack .../00-libbsd0_0.9.1-2_armhf.deb ... Unpacking libbsd0:armhf (0.9.1-2) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../01-bsdmainutils_11.1.2+b1_armhf.deb ... Unpacking bsdmainutils (11.1.2+b1) ... Selecting previously unselected package libuchardet0:armhf. Preparing to unpack .../02-libuchardet0_0.0.6-3_armhf.deb ... Unpacking libuchardet0:armhf (0.0.6-3) ... Selecting previously unselected package groff-base. Preparing to unpack .../03-groff-base_1.22.4-3_armhf.deb ... Unpacking groff-base (1.22.4-3) ... Selecting previously unselected package libpipeline1:armhf. Preparing to unpack .../04-libpipeline1_1.5.1-2_armhf.deb ... Unpacking libpipeline1:armhf (1.5.1-2) ... Selecting previously unselected package man-db. Preparing to unpack .../05-man-db_2.8.5-2_armhf.deb ... Unpacking man-db (2.8.5-2) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../06-sensible-utils_0.0.12_all.deb ... Unpacking sensible-utils (0.0.12) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../07-libmagic-mgc_1%3a5.35-4+deb10u1_armhf.deb ... Unpacking libmagic-mgc (1:5.35-4+deb10u1) ... Selecting previously unselected package libmagic1:armhf. Preparing to unpack .../08-libmagic1_1%3a5.35-4+deb10u1_armhf.deb ... Unpacking libmagic1:armhf (1:5.35-4+deb10u1) ... Selecting previously unselected package file. Preparing to unpack .../09-file_1%3a5.35-4+deb10u1_armhf.deb ... Unpacking file (1:5.35-4+deb10u1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../10-gettext-base_0.19.8.1-9_armhf.deb ... Unpacking gettext-base (0.19.8.1-9) ... Selecting previously unselected package libsigsegv2:armhf. Preparing to unpack .../11-libsigsegv2_2.12-2_armhf.deb ... Unpacking libsigsegv2:armhf (2.12-2) ... Selecting previously unselected package m4. Preparing to unpack .../12-m4_1.4.18-2_armhf.deb ... Unpacking m4 (1.4.18-2) ... Selecting previously unselected package autoconf. Preparing to unpack .../13-autoconf_2.69-11_all.deb ... Unpacking autoconf (2.69-11) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../14-autotools-dev_20180224.1_all.deb ... Unpacking autotools-dev (20180224.1) ... Selecting previously unselected package automake. Preparing to unpack .../15-automake_1%3a1.16.1-4_all.deb ... Unpacking automake (1:1.16.1-4) ... Selecting previously unselected package autopoint. Preparing to unpack .../16-autopoint_0.19.8.1-9_all.deb ... Unpacking autopoint (0.19.8.1-9) ... Selecting previously unselected package libtool. Preparing to unpack .../17-libtool_2.4.6-9_all.deb ... Unpacking libtool (2.4.6-9) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../18-dh-autoreconf_19_all.deb ... Unpacking dh-autoreconf (19) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../19-libarchive-zip-perl_1.64-1_all.deb ... Unpacking libarchive-zip-perl (1.64-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../20-libfile-stripnondeterminism-perl_1.1.2-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.1.2-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../21-dh-strip-nondeterminism_1.1.2-1_all.deb ... Unpacking dh-strip-nondeterminism (1.1.2-1) ... Selecting previously unselected package libelf1:armhf. Preparing to unpack .../22-libelf1_0.176-1.1_armhf.deb ... Unpacking libelf1:armhf (0.176-1.1) ... Selecting previously unselected package dwz. Preparing to unpack .../23-dwz_0.12-3_armhf.deb ... Unpacking dwz (0.12-3) ... Selecting previously unselected package libglib2.0-0:armhf. Preparing to unpack .../24-libglib2.0-0_2.58.3-2+deb10u2_armhf.deb ... Unpacking libglib2.0-0:armhf (2.58.3-2+deb10u2) ... Selecting previously unselected package libicu63:armhf. Preparing to unpack .../25-libicu63_63.1-6+deb10u1_armhf.deb ... Unpacking libicu63:armhf (63.1-6+deb10u1) ... Selecting previously unselected package libxml2:armhf. Preparing to unpack .../26-libxml2_2.9.4+dfsg1-7+b3_armhf.deb ... Unpacking libxml2:armhf (2.9.4+dfsg1-7+b3) ... Selecting previously unselected package libcroco3:armhf. 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Setting up libncurses6:armhf (6.1+20181013-2+deb10u2) ... Setting up libsigsegv2:armhf (2.12-2) ... Setting up autopoint (0.19.8.1-9) ... Setting up sensible-utils (0.0.12) ... Setting up libuchardet0:armhf (0.0.6-3) ... Setting up libbsd0:armhf (0.9.1-2) ... Setting up libelf1:armhf (0.176-1.1) ... Setting up libxml2:armhf (2.9.4+dfsg1-7+b3) ... Setting up libfile-stripnondeterminism-perl (1.1.2-1) ... Setting up libgsl-dev (2.5+dfsg-6) ... Setting up libtool (2.4.6-9) ... Setting up m4 (1.4.18-2) ... Setting up bsdmainutils (11.1.2+b1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libcroco3:armhf (0.6.12-3) ... Setting up autoconf (2.69-11) ... Setting up dwz (0.12-3) ... Setting up groff-base (1.22.4-3) ... Setting up automake (1:1.16.1-4) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up gettext (0.19.8.1-9) ... Setting up man-db (2.8.5-2) ... Not building database; man-db/auto-update is not 'true'. Setting up intltool-debian (0.35.0+20060710.5) ... Setting up po-debconf (1.0.21) ... Setting up debhelper (12.1.1) ... Setting up dh-autoreconf (19) ... Setting up dh-strip-nondeterminism (1.1.2-1) ... Processing triggers for libc-bin (2.28-10) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps Reading package lists... Building dependency tree... Reading state information... fakeroot is already the newest version (1.23-1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package I: Running cd /build/pscan-tfbs-1.2.2/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b dpkg-buildpackage: info: source package pscan-tfbs dpkg-buildpackage: info: source version 1.2.2-3 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf fakeroot debian/rules clean dh clean debian/rules override_dh_auto_clean make[1]: Entering directory '/build/pscan-tfbs-1.2.2' dh_clean rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/pscan-tfbs.substvars debian/files rm -fr -- debian/pscan-tfbs/ debian/tmp/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a -name autom4te.cache -prune -exec rm -rf {} + \) \) rm -f pscan make[1]: Leaving directory '/build/pscan-tfbs-1.2.2' dh_clean rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/pscan-tfbs.substvars debian/files rm -fr -- debian/pscan-tfbs/ debian/tmp/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a -name autom4te.cache -prune -exec rm -rf {} + \) \) debian/rules build dh build dh_update_autotools_config dh_autoreconf debian/rules override_dh_auto_build make[1]: Entering directory '/build/pscan-tfbs-1.2.2' arm-linux-gnueabihf-g++ -g -O2 -ffile-prefix-map=/build/pscan-tfbs-1.2.2=. -fstack-protector-strong -Wformat -Werror=format-security -flto pscan.cpp -o pscan -Wl,-z,relro -Wl,-flto -lgslcblas -lgsl pscan.cpp: In member function 'char query::comp_char(char)': pscan.cpp:4877:1: warning: control reaches end of non-void function [-Wreturn-type] } ^ make[1]: Leaving directory '/build/pscan-tfbs-1.2.2' create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary dh binary dh_testroot dh_prep rm -f -- debian/pscan-tfbs.substvars rm -fr -- debian/.debhelper/generated/pscan-tfbs/ debian/pscan-tfbs/ debian/tmp/ dh_install install -d debian/pscan-tfbs/usr/lib/debian-med/bin/ cp --reflink=auto -a ./pscan debian/pscan-tfbs/usr/lib/debian-med/bin// install -d debian/.debhelper/generated/pscan-tfbs dh_installdocs install -d debian/pscan-tfbs/usr/share/doc/pscan-tfbs cp --reflink=auto -a ./HELP.txt debian/pscan-tfbs/usr/share/doc/pscan-tfbs cp --reflink=auto -a ./REFERENCE.txt debian/pscan-tfbs/usr/share/doc/pscan-tfbs chown -R 0:0 debian/pscan-tfbs/usr/share/doc chmod -R u\+rw,go=rX debian/pscan-tfbs/usr/share/doc install -p -m0644 debian/README.Debian debian/pscan-tfbs/usr/share/doc/pscan-tfbs/README.Debian install -p -m0644 debian/copyright debian/pscan-tfbs/usr/share/doc/pscan-tfbs/copyright dh_installchangelogs install -p -m0644 debian/changelog debian/pscan-tfbs/usr/share/doc/pscan-tfbs/changelog.Debian dh_installexamples install -d debian/pscan-tfbs/usr/share/doc/pscan-tfbs/examples cp --reflink=auto -a ./example_matrix_file.wil debian/pscan-tfbs/usr/share/doc/pscan-tfbs/examples dh_installman install -d debian/pscan-tfbs/usr/share/man/man1/ install -p -m0644 ./debian/pscan-tfbs.1 debian/pscan-tfbs/usr/share/man/man1/pscan-tfbs.1 man -l --recode UTF-8 ./debian/pscan-tfbs/usr/share/man/man1/pscan-tfbs.1 > debian/pscan-tfbs/usr/share/man/man1/pscan-tfbs.1.dh-new mv debian/pscan-tfbs/usr/share/man/man1/pscan-tfbs.1.dh-new debian/pscan-tfbs/usr/share/man/man1/pscan-tfbs.1 chmod 0644 -- debian/pscan-tfbs/usr/share/man/man1/pscan-tfbs.1 dh_perl dh_link install -d debian/pscan-tfbs/usr/lib/debian-med/share/man/man1 rm -f debian/pscan-tfbs/usr/lib/debian-med/share/man/man1/pscan.1.gz ln -s ../../../../../share/man/man1/pscan-tfbs.1.gz debian/pscan-tfbs/usr/lib/debian-med/share/man/man1/pscan.1.gz install -d debian/pscan-tfbs/usr/bin rm -f debian/pscan-tfbs/usr/bin/pscan-tfbs ln -s ../lib/debian-med/bin/pscan debian/pscan-tfbs/usr/bin/pscan-tfbs dh_strip_nondeterminism dh_compress cd debian/pscan-tfbs chmod a-x usr/share/doc/pscan-tfbs/HELP.txt usr/share/doc/pscan-tfbs/changelog.Debian usr/share/man/man1/pscan-tfbs.1 gzip -9nf usr/share/doc/pscan-tfbs/HELP.txt usr/share/doc/pscan-tfbs/changelog.Debian usr/share/man/man1/pscan-tfbs.1 cd '/build/pscan-tfbs-1.2.2' dh_fixperms find debian/pscan-tfbs -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/pscan-tfbs ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/pscan-tfbs/usr/share/doc -type f -a -true -a ! -regex 'debian/pscan-tfbs/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/pscan-tfbs/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/pscan-tfbs/usr/share/man -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/pscan-tfbs -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/pscan-tfbs/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x find debian/pscan-tfbs/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w dh_missing dh_strip install -d debian/.debhelper/pscan-tfbs/dbgsym-root/usr/lib/debug/.build-id/e4 objcopy --only-keep-debug --compress-debug-sections debian/pscan-tfbs/usr/lib/debian-med/bin/pscan debian/.debhelper/pscan-tfbs/dbgsym-root/usr/lib/debug/.build-id/e4/f0cac1c07f0bdd1d3f01b853e3f3a3f6300777.debug chmod 0644 -- debian/.debhelper/pscan-tfbs/dbgsym-root/usr/lib/debug/.build-id/e4/f0cac1c07f0bdd1d3f01b853e3f3a3f6300777.debug chown 0:0 -- debian/.debhelper/pscan-tfbs/dbgsym-root/usr/lib/debug/.build-id/e4/f0cac1c07f0bdd1d3f01b853e3f3a3f6300777.debug strip --remove-section=.comment --remove-section=.note debian/pscan-tfbs/usr/lib/debian-med/bin/pscan objcopy --add-gnu-debuglink debian/.debhelper/pscan-tfbs/dbgsym-root/usr/lib/debug/.build-id/e4/f0cac1c07f0bdd1d3f01b853e3f3a3f6300777.debug debian/pscan-tfbs/usr/lib/debian-med/bin/pscan install -d debian/.debhelper/pscan-tfbs/dbgsym-root/usr/share/doc ln -s pscan-tfbs debian/.debhelper/pscan-tfbs/dbgsym-root/usr/share/doc/pscan-tfbs-dbgsym dh_makeshlibs rm -f debian/pscan-tfbs/DEBIAN/shlibs dh_shlibdeps install -d debian/pscan-tfbs/DEBIAN dpkg-shlibdeps -Tdebian/pscan-tfbs.substvars debian/pscan-tfbs/usr/lib/debian-med/bin/pscan dpkg-shlibdeps: warning: debian/pscan-tfbs/usr/lib/debian-med/bin/pscan contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/pscan-tfbs/usr/lib/debian-med/bin/pscan was not linked against libgslcblas.so.0 (it uses none of the library's symbols) dh_installdeb dh_gencontrol echo misc:Depends= >> debian/pscan-tfbs.substvars echo misc:Pre-Depends= >> debian/pscan-tfbs.substvars install -d debian/.debhelper/pscan-tfbs/dbgsym-root/DEBIAN dpkg-gencontrol -ppscan-tfbs -ldebian/changelog -Tdebian/pscan-tfbs.substvars -Pdebian/.debhelper/pscan-tfbs/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -DAuto-Built-Package=debug-symbols -DPackage=pscan-tfbs-dbgsym "-DDepends=pscan-tfbs (= \${binary:Version})" "-DDescription=debug symbols for pscan-tfbs" -DBuild-Ids=e4f0cac1c07f0bdd1d3f01b853e3f3a3f6300777 -DSection=debug -UMulti-Arch -UReplaces -UBreaks chmod 0644 -- debian/.debhelper/pscan-tfbs/dbgsym-root/DEBIAN/control chown 0:0 -- debian/.debhelper/pscan-tfbs/dbgsym-root/DEBIAN/control dpkg-gencontrol -ppscan-tfbs -ldebian/changelog -Tdebian/pscan-tfbs.substvars -Pdebian/pscan-tfbs -UMulti-Arch chmod 0644 -- debian/pscan-tfbs/DEBIAN/control chown 0:0 -- debian/pscan-tfbs/DEBIAN/control dh_md5sums cd debian/pscan-tfbs >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/pscan-tfbs/DEBIAN/md5sums chown 0:0 -- debian/pscan-tfbs/DEBIAN/md5sums cd debian/.debhelper/pscan-tfbs/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/.debhelper/pscan-tfbs/dbgsym-root/DEBIAN/md5sums chown 0:0 -- debian/.debhelper/pscan-tfbs/dbgsym-root/DEBIAN/md5sums dh_builddeb dpkg-deb --build debian/pscan-tfbs .. dpkg-deb --build debian/.debhelper/pscan-tfbs/dbgsym-root .. dpkg-deb: building package 'pscan-tfbs' in '../pscan-tfbs_1.2.2-3_armhf.deb'. dpkg-deb: building package 'pscan-tfbs-dbgsym' in '../pscan-tfbs-dbgsym_1.2.2-3_armhf.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../pscan-tfbs_1.2.2-3_armhf.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/16583 and its subdirectories I: Current time: Tue Jul 7 09:34:33 -12 2020 I: pbuilder-time-stamp: 1594157673 Tue Jul 7 21:34:44 UTC 2020 I: 1st build successful. Starting 2nd build on remote node cbxi4b-armhf-rb.debian.net. Tue Jul 7 21:34:44 UTC 2020 I: Preparing to do remote build '2' on cbxi4b-armhf-rb.debian.net. Tue Jul 7 21:44:42 UTC 2020 I: Deleting $TMPDIR on cbxi4b-armhf-rb.debian.net. Tue Jul 7 21:44:44 UTC 2020 I: pscan-tfbs_1.2.2-3_armhf.changes: Format: 1.8 Date: Tue, 11 Jun 2019 13:28:34 +0200 Source: pscan-tfbs Binary: pscan-tfbs pscan-tfbs-dbgsym Architecture: armhf Version: 1.2.2-3 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: pscan-tfbs - search for transcription factor binding sites Closes: 930242 Changes: pscan-tfbs (1.2.2-3) unstable; urgency=medium . * Team upload. . [ Helmut Grohne ] * Fix FTCBFS: Let dpkg's buildtools.mk supply $(CXX). (Closes: #930242) . [ Andreas Tille ] * Standards-Version: 4.3.0 Checksums-Sha1: 3434f5c1ddfceb0281de630ba7b9c7e74ec0b2f8 743840 pscan-tfbs-dbgsym_1.2.2-3_armhf.deb e36c9a4da1b08fbb1124eeeee08ad742fb25e7ce 4590 pscan-tfbs_1.2.2-3_armhf.buildinfo 8d23c517523fa012245c00f88a95806a439692c9 60644 pscan-tfbs_1.2.2-3_armhf.deb Checksums-Sha256: 0a3f1dc78db2f1ddc24e3a116e98470641a1f4630901fc9127b166a504e20e13 743840 pscan-tfbs-dbgsym_1.2.2-3_armhf.deb 32dbb10e84a72ffc6cf466809825b542cfcd8328d71be48fff1de7659107cff2 4590 pscan-tfbs_1.2.2-3_armhf.buildinfo 0d65e51122b178d063c42972706f4bbf93b4fc431e7f939902766ded19a63242 60644 pscan-tfbs_1.2.2-3_armhf.deb Files: a0186e2d16b02300bbf929b927568bdf 743840 debug optional pscan-tfbs-dbgsym_1.2.2-3_armhf.deb 8867ab1b7b64afc740eeba2b7a644332 4590 science optional pscan-tfbs_1.2.2-3_armhf.buildinfo 552da40b73b19e6471ad5a6895ca43b3 60644 science optional pscan-tfbs_1.2.2-3_armhf.deb Tue Jul 7 21:44:54 UTC 2020 I: diffoscope 150 will be used to compare the two builds: # Profiling output for: /usr/bin/diffoscope --html /srv/reproducible-results/rbuild-debian/tmp.pfaFZDZM2V/pscan-tfbs_1.2.2-3.diffoscope.html --text /srv/reproducible-results/rbuild-debian/tmp.pfaFZDZM2V/pscan-tfbs_1.2.2-3.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/tmp.pfaFZDZM2V/pscan-tfbs_1.2.2-3.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/tmp.pfaFZDZM2V/b1/pscan-tfbs_1.2.2-3_armhf.changes /srv/reproducible-results/rbuild-debian/tmp.pfaFZDZM2V/b2/pscan-tfbs_1.2.2-3_armhf.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.284s) 0.284s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.031s) 0.031s 10 calls diffoscope.comparators.binary.FilesystemFile 0.000s 8 calls abc.DotChangesFile Tue Jul 7 21:45:16 UTC 2020 I: diffoscope 150 found no differences in the changes files, and a .buildinfo file also exists. Tue Jul 7 21:45:16 UTC 2020 I: pscan-tfbs from buster built successfully and reproducibly on armhf. Tue Jul 7 21:45:17 UTC 2020 I: Submitting .buildinfo files to external archives: Tue Jul 7 21:45:17 UTC 2020 I: Submitting 8.0K b1/pscan-tfbs_1.2.2-3_armhf.buildinfo.asc Tue Jul 7 21:45:19 UTC 2020 I: Submitting 8.0K b2/pscan-tfbs_1.2.2-3_armhf.buildinfo.asc Tue Jul 7 21:45:19 UTC 2020 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Tue Jul 7 21:45:19 UTC 2020 I: Done submitting .buildinfo files. Tue Jul 7 21:45:19 UTC 2020 I: Removing signed pscan-tfbs_1.2.2-3_armhf.buildinfo.asc files: removed './b1/pscan-tfbs_1.2.2-3_armhf.buildinfo.asc' removed './b2/pscan-tfbs_1.2.2-3_armhf.buildinfo.asc'