Fri Oct 23 01:57:01 UTC 2020 I: starting to build librostlab/buster/armhf on jenkins on '2020-10-23 01:56' Fri Oct 23 01:57:01 UTC 2020 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/armhf_35/7677/console.log Fri Oct 23 01:57:01 UTC 2020 I: Downloading source for buster/librostlab=1.0.20-8 --2020-10-23 01:57:01-- http://deb.debian.org/debian/pool/main/libr/librostlab/librostlab_1.0.20-8.dsc Connecting to 78.137.99.97:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2297 (2.2K) Saving to: ‘librostlab_1.0.20-8.dsc’ 0K .. 100% 269M=0s 2020-10-23 01:57:01 (269 MB/s) - ‘librostlab_1.0.20-8.dsc’ saved [2297/2297] Fri Oct 23 01:57:01 UTC 2020 I: librostlab_1.0.20-8.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: librostlab Binary: librostlab3, librostlab3-dev, librostlab-doc Architecture: any all Version: 1.0.20-8 Maintainer: Debian Med Packaging Team Uploaders: Laszlo Kajan , Andreas Tille Homepage: http://rostlab.org/ Standards-Version: 4.2.1 Vcs-Browser: https://salsa.debian.org/med-team/librostlab Vcs-Git: https://salsa.debian.org/med-team/librostlab.git Testsuite: autopkgtest Testsuite-Triggers: build-essential Build-Depends: debhelper (>= 11~), d-shlibs, doxygen, graphviz, texlive-latex-recommended, texlive-fonts-recommended, texlive-latex-extra, dh-linktree, sphinx-common Package-List: librostlab-doc deb doc optional arch=all librostlab3 deb libs optional arch=any librostlab3-dev deb libdevel optional arch=any Checksums-Sha1: 03efd8b5399a0553bb834077f3bc214b22c7233b 354367 librostlab_1.0.20.orig.tar.gz 89e782c2951be66087b4c40473b44cd8e12c3c6f 5116 librostlab_1.0.20-8.debian.tar.xz Checksums-Sha256: db4295b8add574016048597216dc7d1fa95a719377b5ce962e39278198935efa 354367 librostlab_1.0.20.orig.tar.gz 80416e745daf08aded4e1ed870c6b2a2d67fbb27ec260e59d4e163faaf72a60b 5116 librostlab_1.0.20-8.debian.tar.xz Files: 3a3bfdba83ade5cede3f0d4197f41f1f 354367 librostlab_1.0.20.orig.tar.gz 7da43dcc7a40c229b0d61db89b160546 5116 librostlab_1.0.20-8.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAlujZGoRHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtGdjA//eovJ0zr+WNSRlGuLGRvNzzrx28RZuq5f WS5zzcrBpL/I8nWCVByptGl2CdMTJ0ZdrV098i1qo54wmOPfaLu/XrePhjFpVB4r LOE466awWip9eBt/SH9UjfrxQ9hpC+mwpbyStagUoIazIT5vB+dYk8UHtGhsaIej J3oi0/WYX/EIx2qPngFpsG8sFZ3TFhP5X/PJUI8EKpr758Rq4sdygUViW0201REj 9e2gKY9lhgumfKJKqoTzT+32fQ4zKQolQQpslBcTVdJ7pjq9/ubfrFlfBtiO4QBg LKhHKnfnzxHU6Ikld2NSX02STnnSB3D9VwHAVS30fH1knM4PSa7wCv7StFqZho+i BXljU9cpSldEoHoiUPY+b5+QVUKgwK5pw3MZorQsA6EJO1kDzxoUOdlyL3G9YTdy EAQFgkaW2q9ylnDLMc6x5iK8krWK2kz4wEV7RXmjv5xLsDSf1WLcK7mTUuXh1wew 3ZqEoHTeP38Xch7FaUYczuPRz36GLDzR1gLM7TGCbVaFMD9oqx0upDySLsZaRkPC 8r6ps6KZSQOrMVuGevHJPgaOmtGavJKpEAX9lN2JkXfebtRwA5MlPRzIv2KeeSr0 JBaGO31dLwUp/rHCYjaKS+eKcnourao+UVrzKYAWAbd0PnJbcRjsSTZC4wbnOtrq MiQiGl++cT4= =4X2b -----END PGP SIGNATURE----- Fri Oct 23 01:57:01 UTC 2020 I: Checking whether the package is not for us Fri Oct 23 01:57:01 UTC 2020 I: Starting 1st build on remote node p64b-armhf-rb.debian.net. Fri Oct 23 01:57:01 UTC 2020 I: Preparing to do remote build '1' on p64b-armhf-rb.debian.net. Fri Oct 23 02:06:19 UTC 2020 I: Deleting $TMPDIR on p64b-armhf-rb.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Thu Oct 22 13:57:11 -12 2020 I: pbuilder-time-stamp: 1603418231 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/buster-reproducible-base.tgz] I: copying local configuration I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [librostlab_1.0.20-8.dsc] I: copying [./librostlab_1.0.20.orig.tar.gz] I: copying [./librostlab_1.0.20-8.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/root/.gnupg/trustedkeys.kbx': General error gpgv: Signature made Wed Sep 19 21:12:10 2018 -12 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./librostlab_1.0.20-8.dsc dpkg-source: info: extracting librostlab in librostlab-1.0.20 dpkg-source: info: unpacking librostlab_1.0.20.orig.tar.gz dpkg-source: info: unpacking librostlab_1.0.20-8.debian.tar.xz I: using fakeroot in build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/32092/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='armhf' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=3' DISTRIBUTION='' HOME='/root' HOST_ARCH='armhf' IFS=' ' INVOCATION_ID='602a26a1640744a193e58870683c2248' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='32092' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.NHDPDEgc04/pbuilderrc_VAQy --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/buster-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.NHDPDEgc04/b1 --logfile b1/build.log librostlab_1.0.20-8.dsc' SUDO_GID='115' SUDO_UID='110' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://10.0.0.15:8000/' I: uname -a Linux p64b 4.19.0-12-arm64 #1 SMP Debian 4.19.152-1 (2020-10-18) aarch64 GNU/Linux I: ls -l /bin total 3328 -rwxr-xr-x 1 root root 767656 Apr 17 2019 bash -rwxr-xr-x 3 root root 26052 Jul 10 2019 bunzip2 -rwxr-xr-x 3 root root 26052 Jul 10 2019 bzcat lrwxrwxrwx 1 root root 6 Jul 10 2019 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2227 Jul 10 2019 bzdiff lrwxrwxrwx 1 root root 6 Jul 10 2019 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4877 Jun 24 2019 bzexe lrwxrwxrwx 1 root root 6 Jul 10 2019 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3641 Jul 10 2019 bzgrep -rwxr-xr-x 3 root root 26052 Jul 10 2019 bzip2 -rwxr-xr-x 1 root root 9636 Jul 10 2019 bzip2recover lrwxrwxrwx 1 root root 6 Jul 10 2019 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Jul 10 2019 bzmore -rwxr-xr-x 1 root root 22432 Feb 28 2019 cat -rwxr-xr-x 1 root root 38868 Feb 28 2019 chgrp -rwxr-xr-x 1 root root 38836 Feb 28 2019 chmod -rwxr-xr-x 1 root root 42972 Feb 28 2019 chown -rwxr-xr-x 1 root root 88376 Feb 28 2019 cp -rwxr-xr-x 1 root root 75516 Jan 17 2019 dash -rwxr-xr-x 1 root root 71648 Feb 28 2019 date -rwxr-xr-x 1 root root 51212 Feb 28 2019 dd -rwxr-xr-x 1 root root 55672 Feb 28 2019 df -rwxr-xr-x 1 root root 88444 Feb 28 2019 dir -rwxr-xr-x 1 root root 54872 Jan 9 2019 dmesg lrwxrwxrwx 1 root root 8 Sep 26 2018 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Sep 26 2018 domainname -> hostname -rwxr-xr-x 1 root root 22364 Feb 28 2019 echo -rwxr-xr-x 1 root root 28 Jan 7 2019 egrep -rwxr-xr-x 1 root root 18260 Feb 28 2019 false -rwxr-xr-x 1 root root 28 Jan 7 2019 fgrep -rwxr-xr-x 1 root root 47356 Jan 9 2019 findmnt -rwsr-xr-x 1 root root 21980 Apr 22 2020 fusermount -rwxr-xr-x 1 root root 124508 Jan 7 2019 grep -rwxr-xr-x 2 root root 2345 Jan 5 2019 gunzip -rwxr-xr-x 1 root root 6375 Jan 5 2019 gzexe -rwxr-xr-x 1 root root 64232 Jan 5 2019 gzip -rwxr-xr-x 1 root root 13784 Sep 26 2018 hostname -rwxr-xr-x 1 root root 43044 Feb 28 2019 ln -rwxr-xr-x 1 root root 34932 Jul 26 2018 login -rwxr-xr-x 1 root root 88444 Feb 28 2019 ls -rwxr-xr-x 1 root root 67036 Jan 9 2019 lsblk -rwxr-xr-x 1 root root 47168 Feb 28 2019 mkdir -rwxr-xr-x 1 root root 43040 Feb 28 2019 mknod -rwxr-xr-x 1 root root 26552 Feb 28 2019 mktemp -rwxr-xr-x 1 root root 26024 Jan 9 2019 more -rwsr-xr-x 1 root root 34268 Jan 9 2019 mount -rwxr-xr-x 1 root root 9688 Jan 9 2019 mountpoint -rwxr-xr-x 1 root root 84284 Feb 28 2019 mv lrwxrwxrwx 1 root root 8 Sep 26 2018 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Feb 14 2019 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 22416 Feb 28 2019 pwd lrwxrwxrwx 1 root root 4 Apr 17 2019 rbash -> bash -rwxr-xr-x 1 root root 26504 Feb 28 2019 readlink -rwxr-xr-x 1 root root 42968 Feb 28 2019 rm -rwxr-xr-x 1 root root 26496 Feb 28 2019 rmdir -rwxr-xr-x 1 root root 14136 Jan 21 2019 run-parts -rwxr-xr-x 1 root root 76012 Dec 22 2018 sed lrwxrwxrwx 1 root root 4 Oct 20 20:28 sh -> dash -rwxr-xr-x 1 root root 22384 Feb 28 2019 sleep -rwxr-xr-x 1 root root 51124 Feb 28 2019 stty -rwsr-xr-x 1 root root 42472 Jan 9 2019 su -rwxr-xr-x 1 root root 22392 Feb 28 2019 sync -rwxr-xr-x 1 root root 283324 Apr 23 2019 tar -rwxr-xr-x 1 root root 9808 Jan 21 2019 tempfile -rwxr-xr-x 1 root root 63464 Feb 28 2019 touch -rwxr-xr-x 1 root root 18260 Feb 28 2019 true -rwxr-xr-x 1 root root 9636 Apr 22 2020 ulockmgr_server -rwsr-xr-x 1 root root 21976 Jan 9 2019 umount -rwxr-xr-x 1 root root 22380 Feb 28 2019 uname -rwxr-xr-x 2 root root 2345 Jan 5 2019 uncompress -rwxr-xr-x 1 root root 88444 Feb 28 2019 vdir -rwxr-xr-x 1 root root 21980 Jan 9 2019 wdctl -rwxr-xr-x 1 root root 946 Jan 21 2019 which lrwxrwxrwx 1 root root 8 Sep 26 2018 ypdomainname -> hostname -rwxr-xr-x 1 root root 1983 Jan 5 2019 zcat -rwxr-xr-x 1 root root 1677 Jan 5 2019 zcmp -rwxr-xr-x 1 root root 5879 Jan 5 2019 zdiff -rwxr-xr-x 1 root root 29 Jan 5 2019 zegrep -rwxr-xr-x 1 root root 29 Jan 5 2019 zfgrep -rwxr-xr-x 1 root root 2080 Jan 5 2019 zforce -rwxr-xr-x 1 root root 7584 Jan 5 2019 zgrep -rwxr-xr-x 1 root root 2205 Jan 5 2019 zless -rwxr-xr-x 1 root root 1841 Jan 5 2019 zmore -rwxr-xr-x 1 root root 4552 Jan 5 2019 znew I: user script /srv/workspace/pbuilder/32092/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: armhf Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper (>= 11~), d-shlibs, doxygen, graphviz, texlive-latex-recommended, texlive-fonts-recommended, texlive-latex-extra, dh-linktree, sphinx-common dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 18932 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper (>= 11~); however: Package debhelper is not installed. pbuilder-satisfydepends-dummy depends on d-shlibs; however: Package d-shlibs is not installed. pbuilder-satisfydepends-dummy depends on doxygen; however: Package doxygen is not installed. pbuilder-satisfydepends-dummy depends on graphviz; however: Package graphviz is not installed. pbuilder-satisfydepends-dummy depends on texlive-latex-recommended; however: Package texlive-latex-recommended is not installed. pbuilder-satisfydepends-dummy depends on texlive-fonts-recommended; however: Package texlive-fonts-recommended is not installed. pbuilder-satisfydepends-dummy depends on texlive-latex-extra; however: Package texlive-latex-extra is not installed. pbuilder-satisfydepends-dummy depends on dh-linktree; however: Package dh-linktree is not installed. pbuilder-satisfydepends-dummy depends on sphinx-common; however: Package sphinx-common is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdmainutils{a} d-shlibs{a} debhelper{a} dh-autoreconf{a} dh-linktree{a} dh-strip-nondeterminism{a} doxygen{a} dwz{a} file{a} fontconfig{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-lmodern{a} gettext{a} gettext-base{a} graphviz{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libavahi-client3{a} libavahi-common-data{a} libavahi-common3{a} libbrotli1{a} libbsd0{a} libcairo2{a} libcdt5{a} libcgraph6{a} libclang1-6.0{a} libcroco3{a} libcups2{a} libcupsimage2{a} libdatrie1{a} libdbus-1-3{a} libedit2{a} libelf1{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libfontconfig1{a} libfreetype6{a} libfribidi0{a} libgd3{a} libglib2.0-0{a} libgraphite2-3{a} libgs9{a} libgs9-common{a} libgssapi-krb5-2{a} libgts-0.7-5{a} libgvc6{a} libgvpr2{a} libharfbuzz-icu0{a} libharfbuzz0b{a} libice6{a} libicu63{a} libidn11{a} libijs-0.35{a} libjbig0{a} libjbig2dec0{a} libjpeg62-turbo{a} libjs-jquery{a} libjs-sphinxdoc{a} libjs-underscore{a} libk5crypto3{a} libkeyutils1{a} libkpathsea6{a} libkrb5-3{a} libkrb5support0{a} liblab-gamut1{a} liblcms2-2{a} libllvm6.0{a} libltdl7{a} libmagic-mgc{a} libmagic1{a} libncurses6{a} libopenjp2-7{a} libpango-1.0-0{a} libpangocairo-1.0-0{a} libpangoft2-1.0-0{a} libpaper-utils{a} libpaper1{a} libpathplan4{a} libpipeline1{a} libpixman-1-0{a} libpng16-16{a} libpotrace0{a} libptexenc1{a} libpython-stdlib{a} libpython2-stdlib{a} libpython2.7-minimal{a} libpython2.7-stdlib{a} libreadline7{a} libsigsegv2{a} libsm6{a} libssl1.1{a} libsynctex2{a} libteckit0{a} libtexlua52{a} libtexlua53{a} libtexluajit2{a} libthai-data{a} libthai0{a} libtiff5{a} libtool{a} libuchardet0{a} libwebp6{a} libwoff1{a} libx11-6{a} libx11-data{a} libxau6{a} libxaw7{a} libxcb-render0{a} libxcb-shm0{a} libxcb1{a} libxdmcp6{a} libxdot4{a} libxext6{a} libxi6{a} libxml2{a} libxmu6{a} libxpm4{a} libxrender1{a} libxt6{a} libxxhash0{a} libzzip-0-13{a} lsb-base{a} m4{a} man-db{a} mime-support{a} po-debconf{a} poppler-data{a} preview-latex-style{a} python{a} python-minimal{a} python2{a} python2-minimal{a} python2.7{a} python2.7-minimal{a} readline-common{a} sensible-utils{a} sphinx-common{a} t1utils{a} tex-common{a} texlive-base{a} texlive-binaries{a} texlive-fonts-recommended{a} texlive-latex-base{a} texlive-latex-extra{a} texlive-latex-recommended{a} texlive-pictures{a} ucf{a} x11-common{a} xdg-utils{a} The following packages are RECOMMENDED but will NOT be installed: curl dbus fonts-droid-fallback fonts-liberation javascript-common krb5-locales libarchive-cpio-perl libcupsfilters1 libfile-mimeinfo-perl libglib2.0-data libgpm2 libgts-bin libltdl-dev libmail-sendmail-perl libnet-dbus-perl libx11-protocol-perl lmodern lynx python-sphinx python3-sphinx ruby shared-mime-info tex-gyre texlive-plain-generic tipa tk wget x11-utils x11-xserver-utils xdg-user-dirs 0 packages upgraded, 155 newly installed, 0 to remove and 0 not upgraded. Need to get 146 MB of archives. After unpacking 494 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian buster/main armhf libbsd0 armhf 0.9.1-2 [103 kB] Get: 2 http://deb.debian.org/debian buster/main armhf bsdmainutils armhf 11.1.2+b1 [186 kB] Get: 3 http://deb.debian.org/debian buster/main armhf libuchardet0 armhf 0.0.6-3 [62.2 kB] Get: 4 http://deb.debian.org/debian buster/main armhf groff-base armhf 1.22.4-3 [828 kB] Get: 5 http://deb.debian.org/debian buster/main armhf libpipeline1 armhf 1.5.1-2 [26.8 kB] Get: 6 http://deb.debian.org/debian buster/main armhf man-db armhf 2.8.5-2 [1240 kB] Get: 7 http://deb.debian.org/debian buster/main armhf libpython2.7-minimal armhf 2.7.16-2+deb10u1 [395 kB] Get: 8 http://deb.debian.org/debian buster/main armhf python2.7-minimal armhf 2.7.16-2+deb10u1 [1171 kB] Get: 9 http://deb.debian.org/debian buster/main armhf python2-minimal armhf 2.7.16-1 [41.4 kB] Get: 10 http://deb.debian.org/debian buster/main armhf python-minimal armhf 2.7.16-1 [21.0 kB] Get: 11 http://deb.debian.org/debian buster/main armhf libssl1.1 armhf 1.1.1d-0+deb10u3 [1299 kB] Get: 12 http://deb.debian.org/debian buster/main armhf mime-support all 3.62 [37.2 kB] Get: 13 http://deb.debian.org/debian buster/main armhf libexpat1 armhf 2.2.6-2+deb10u1 [78.0 kB] Get: 14 http://deb.debian.org/debian buster/main armhf readline-common all 7.0-5 [70.6 kB] Get: 15 http://deb.debian.org/debian buster/main armhf libreadline7 armhf 7.0-5 [131 kB] Get: 16 http://deb.debian.org/debian buster/main armhf libpython2.7-stdlib armhf 2.7.16-2+deb10u1 [1837 kB] Get: 17 http://deb.debian.org/debian buster/main armhf python2.7 armhf 2.7.16-2+deb10u1 [305 kB] Get: 18 http://deb.debian.org/debian buster/main armhf libpython2-stdlib armhf 2.7.16-1 [20.8 kB] Get: 19 http://deb.debian.org/debian buster/main armhf libpython-stdlib armhf 2.7.16-1 [20.8 kB] Get: 20 http://deb.debian.org/debian buster/main armhf python2 armhf 2.7.16-1 [41.6 kB] Get: 21 http://deb.debian.org/debian buster/main armhf python armhf 2.7.16-1 [22.8 kB] Get: 22 http://deb.debian.org/debian buster/main armhf poppler-data all 0.4.9-2 [1473 kB] Get: 23 http://deb.debian.org/debian buster/main armhf sensible-utils all 0.0.12 [15.8 kB] Get: 24 http://deb.debian.org/debian buster/main armhf ucf all 3.0038+nmu1 [69.0 kB] Get: 25 http://deb.debian.org/debian buster/main armhf tex-common all 6.11 [53.1 kB] Get: 26 http://deb.debian.org/debian buster/main armhf libmagic-mgc armhf 1:5.35-4+deb10u1 [242 kB] Get: 27 http://deb.debian.org/debian buster/main armhf libmagic1 armhf 1:5.35-4+deb10u1 [110 kB] Get: 28 http://deb.debian.org/debian buster/main armhf file armhf 1:5.35-4+deb10u1 [65.5 kB] Get: 29 http://deb.debian.org/debian buster/main armhf gettext-base armhf 0.19.8.1-9 [118 kB] Get: 30 http://deb.debian.org/debian buster/main armhf libsigsegv2 armhf 2.12-2 [32.1 kB] Get: 31 http://deb.debian.org/debian buster/main armhf m4 armhf 1.4.18-2 [190 kB] Get: 32 http://deb.debian.org/debian buster/main armhf autoconf all 2.69-11 [341 kB] Get: 33 http://deb.debian.org/debian buster/main armhf autotools-dev all 20180224.1 [77.0 kB] Get: 34 http://deb.debian.org/debian buster/main armhf automake all 1:1.16.1-4 [771 kB] Get: 35 http://deb.debian.org/debian buster/main armhf autopoint all 0.19.8.1-9 [434 kB] Get: 36 http://deb.debian.org/debian buster/main armhf d-shlibs all 0.84 [17.2 kB] Get: 37 http://deb.debian.org/debian buster/main armhf libtool all 2.4.6-9 [547 kB] Get: 38 http://deb.debian.org/debian buster/main armhf dh-autoreconf all 19 [16.9 kB] Get: 39 http://deb.debian.org/debian buster/main armhf libarchive-zip-perl all 1.64-1 [96.8 kB] Get: 40 http://deb.debian.org/debian buster/main armhf libfile-stripnondeterminism-perl all 1.1.2-1 [19.8 kB] Get: 41 http://deb.debian.org/debian buster/main armhf dh-strip-nondeterminism all 1.1.2-1 [13.0 kB] Get: 42 http://deb.debian.org/debian buster/main armhf libelf1 armhf 0.176-1.1 [158 kB] Get: 43 http://deb.debian.org/debian buster/main armhf dwz armhf 0.12-3 [72.0 kB] Get: 44 http://deb.debian.org/debian buster/main armhf libglib2.0-0 armhf 2.58.3-2+deb10u2 [1101 kB] Get: 45 http://deb.debian.org/debian buster/main armhf libicu63 armhf 63.1-6+deb10u1 [8005 kB] Get: 46 http://deb.debian.org/debian buster/main armhf libxml2 armhf 2.9.4+dfsg1-7+b3 [595 kB] Get: 47 http://deb.debian.org/debian buster/main armhf libcroco3 armhf 0.6.12-3 [133 kB] Get: 48 http://deb.debian.org/debian buster/main armhf libncurses6 armhf 6.1+20181013-2+deb10u2 [79.8 kB] Get: 49 http://deb.debian.org/debian buster/main armhf gettext armhf 0.19.8.1-9 [1242 kB] Get: 50 http://deb.debian.org/debian buster/main armhf intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get: 51 http://deb.debian.org/debian buster/main armhf po-debconf all 1.0.21 [248 kB] Get: 52 http://deb.debian.org/debian buster/main armhf debhelper all 12.1.1 [1016 kB] Get: 53 http://deb.debian.org/debian buster/main armhf dh-linktree all 0.6 [10.7 kB] Get: 54 http://deb.debian.org/debian buster/main armhf libedit2 armhf 3.1-20181209-1 [79.5 kB] Get: 55 http://deb.debian.org/debian buster/main armhf libllvm6.0 armhf 1:6.0.1-10 [13.1 MB] Get: 56 http://deb.debian.org/debian buster/main armhf libclang1-6.0 armhf 1:6.0.1-10 [6029 kB] Get: 57 http://deb.debian.org/debian buster/main armhf doxygen armhf 1.8.13-10 [3568 kB] Get: 58 http://deb.debian.org/debian buster/main armhf libpng16-16 armhf 1.6.36-6 [275 kB] Get: 59 http://deb.debian.org/debian buster/main armhf libfreetype6 armhf 2.9.1-3+deb10u1 [322 kB] Get: 60 http://deb.debian.org/debian buster/main armhf fonts-dejavu-core all 2.37-1 [1068 kB] Get: 61 http://deb.debian.org/debian buster/main armhf fontconfig-config all 2.13.1-2 [280 kB] Get: 62 http://deb.debian.org/debian buster/main armhf libfontconfig1 armhf 2.13.1-2 [328 kB] Get: 63 http://deb.debian.org/debian buster/main armhf fontconfig armhf 2.13.1-2 [404 kB] Get: 64 http://deb.debian.org/debian buster/main armhf fonts-lmodern all 2.004.5-6 [4539 kB] Get: 65 http://deb.debian.org/debian buster/main armhf libpixman-1-0 armhf 0.36.0-1 [465 kB] Get: 66 http://deb.debian.org/debian buster/main armhf libxau6 armhf 1:1.0.8-1+b2 [19.1 kB] Get: 67 http://deb.debian.org/debian buster/main armhf libxdmcp6 armhf 1:1.1.2-3 [24.9 kB] Get: 68 http://deb.debian.org/debian buster/main armhf libxcb1 armhf 1.13.1-2 [132 kB] Get: 69 http://deb.debian.org/debian buster/main armhf libx11-data all 2:1.6.7-1+deb10u1 [294 kB] Get: 70 http://deb.debian.org/debian buster/main armhf libx11-6 armhf 2:1.6.7-1+deb10u1 [698 kB] Get: 71 http://deb.debian.org/debian buster/main armhf libxcb-render0 armhf 1.13.1-2 [108 kB] Get: 72 http://deb.debian.org/debian buster/main armhf libxcb-shm0 armhf 1.13.1-2 [99.0 kB] Get: 73 http://deb.debian.org/debian buster/main armhf libxext6 armhf 2:1.3.3-1+b2 [48.1 kB] Get: 74 http://deb.debian.org/debian buster/main armhf libxrender1 armhf 1:0.9.10-1 [29.9 kB] Get: 75 http://deb.debian.org/debian buster/main armhf libcairo2 armhf 1.16.0-4 [616 kB] Get: 76 http://deb.debian.org/debian buster/main armhf libcdt5 armhf 2.40.1-6 [58.1 kB] Get: 77 http://deb.debian.org/debian buster/main armhf libcgraph6 armhf 2.40.1-6 [77.3 kB] Get: 78 http://deb.debian.org/debian buster/main armhf libjpeg62-turbo armhf 1:1.5.2-2+b1 [112 kB] Get: 79 http://deb.debian.org/debian buster/main armhf libjbig0 armhf 2.1-3.1+b2 [28.4 kB] Get: 80 http://deb.debian.org/debian buster/main armhf libwebp6 armhf 0.6.1-2 [229 kB] Get: 81 http://deb.debian.org/debian buster/main armhf libtiff5 armhf 4.1.0+git191117-2~deb10u1 [252 kB] Get: 82 http://deb.debian.org/debian buster/main armhf libxpm4 armhf 1:3.5.12-1 [44.0 kB] Get: 83 http://deb.debian.org/debian buster/main armhf libgd3 armhf 2.2.5-5.2 [117 kB] Get: 84 http://deb.debian.org/debian buster/main armhf libgts-0.7-5 armhf 0.7.6+darcs121130-4 [137 kB] Get: 85 http://deb.debian.org/debian buster/main armhf libltdl7 armhf 2.4.6-9 [387 kB] Get: 86 http://deb.debian.org/debian buster/main armhf libfribidi0 armhf 1.0.5-3.1+deb10u1 [61.7 kB] Get: 87 http://deb.debian.org/debian buster/main armhf libthai-data all 0.1.28-2 [170 kB] Get: 88 http://deb.debian.org/debian buster/main armhf libdatrie1 armhf 0.2.12-2 [35.8 kB] Get: 89 http://deb.debian.org/debian buster/main armhf libthai0 armhf 0.1.28-2 [50.7 kB] Get: 90 http://deb.debian.org/debian buster/main armhf libpango-1.0-0 armhf 1.42.4-8~deb10u1 [169 kB] Get: 91 http://deb.debian.org/debian buster/main armhf libgraphite2-3 armhf 1.3.13-7 [70.3 kB] Get: 92 http://deb.debian.org/debian buster/main armhf libharfbuzz0b armhf 2.3.1-1 [1151 kB] Get: 93 http://deb.debian.org/debian buster/main armhf libpangoft2-1.0-0 armhf 1.42.4-8~deb10u1 [62.7 kB] Get: 94 http://deb.debian.org/debian buster/main armhf libpangocairo-1.0-0 armhf 1.42.4-8~deb10u1 [52.2 kB] Get: 95 http://deb.debian.org/debian buster/main armhf libpathplan4 armhf 2.40.1-6 [61.3 kB] Get: 96 http://deb.debian.org/debian buster/main armhf libxdot4 armhf 2.40.1-6 [55.4 kB] Get: 97 http://deb.debian.org/debian buster/main armhf libgvc6 armhf 2.40.1-6 [556 kB] Get: 98 http://deb.debian.org/debian buster/main armhf libgvpr2 armhf 2.40.1-6 [189 kB] Get: 99 http://deb.debian.org/debian buster/main armhf lsb-base all 10.2019051400 [28.4 kB] Get: 100 http://deb.debian.org/debian buster/main armhf x11-common all 1:7.7+19 [251 kB] Get: 101 http://deb.debian.org/debian buster/main armhf libice6 armhf 2:1.0.9-2 [51.7 kB] Get: 102 http://deb.debian.org/debian buster/main armhf liblab-gamut1 armhf 2.40.1-6 [220 kB] Get: 103 http://deb.debian.org/debian buster/main armhf libsm6 armhf 2:1.2.3-1 [33.0 kB] Get: 104 http://deb.debian.org/debian buster/main armhf libxt6 armhf 1:1.1.5-1+b3 [159 kB] Get: 105 http://deb.debian.org/debian buster/main armhf libxmu6 armhf 2:1.1.2-2+b3 [52.7 kB] Get: 106 http://deb.debian.org/debian buster/main armhf libxaw7 armhf 2:1.0.13-1+b2 [167 kB] Get: 107 http://deb.debian.org/debian buster/main armhf graphviz armhf 2.40.1-6 [518 kB] Get: 108 http://deb.debian.org/debian buster/main armhf libavahi-common-data armhf 0.7-4+b1 [122 kB] Get: 109 http://deb.debian.org/debian buster/main armhf libavahi-common3 armhf 0.7-4+b1 [51.1 kB] Get: 110 http://deb.debian.org/debian buster/main armhf libdbus-1-3 armhf 1.12.20-0+deb10u1 [191 kB] Get: 111 http://deb.debian.org/debian buster/main armhf libavahi-client3 armhf 0.7-4+b1 [54.5 kB] Get: 112 http://deb.debian.org/debian buster/main armhf libbrotli1 armhf 1.0.7-2 [259 kB] Get: 113 http://deb.debian.org/debian buster/main armhf libkeyutils1 armhf 1.6-6 [13.9 kB] Get: 114 http://deb.debian.org/debian buster/main armhf libkrb5support0 armhf 1.17-3 [62.3 kB] Get: 115 http://deb.debian.org/debian buster/main armhf libk5crypto3 armhf 1.17-3 [119 kB] Get: 116 http://deb.debian.org/debian buster/main armhf libkrb5-3 armhf 1.17-3 [323 kB] Get: 117 http://deb.debian.org/debian buster/main armhf libgssapi-krb5-2 armhf 1.17-3 [137 kB] Get: 118 http://deb.debian.org/debian buster/main armhf libcups2 armhf 2.2.10-6+deb10u3 [291 kB] Get: 119 http://deb.debian.org/debian buster/main armhf libcupsimage2 armhf 2.2.10-6+deb10u3 [130 kB] Get: 120 http://deb.debian.org/debian buster/main armhf libgs9-common all 9.27~dfsg-2+deb10u4 [5136 kB] Get: 121 http://deb.debian.org/debian buster/main armhf libidn11 armhf 1.33-2.2 [113 kB] Get: 122 http://deb.debian.org/debian buster/main armhf libijs-0.35 armhf 0.35-14 [16.7 kB] Get: 123 http://deb.debian.org/debian buster/main armhf libjbig2dec0 armhf 0.16-1 [54.5 kB] Get: 124 http://deb.debian.org/debian buster/main armhf liblcms2-2 armhf 2.9-3 [119 kB] Get: 125 http://deb.debian.org/debian buster/main armhf libopenjp2-7 armhf 2.3.0-2+deb10u1 [143 kB] Get: 126 http://deb.debian.org/debian buster/main armhf libpaper1 armhf 1.1.28 [20.5 kB] Get: 127 http://deb.debian.org/debian buster/main armhf libgs9 armhf 9.27~dfsg-2+deb10u4 [1900 kB] Get: 128 http://deb.debian.org/debian buster/main armhf libharfbuzz-icu0 armhf 2.3.1-1 [833 kB] Get: 129 http://deb.debian.org/debian buster/main armhf libjs-jquery all 3.3.1~dfsg-3 [332 kB] Get: 130 http://deb.debian.org/debian buster/main armhf libjs-underscore all 1.9.1~dfsg-1 [99.4 kB] Get: 131 http://deb.debian.org/debian buster/main armhf libjs-sphinxdoc all 1.8.4-1 [95.9 kB] Get: 132 http://deb.debian.org/debian buster/main armhf libkpathsea6 armhf 2018.20181218.49446-1 [157 kB] Get: 133 http://deb.debian.org/debian buster/main armhf libpaper-utils armhf 1.1.28 [17.6 kB] Get: 134 http://deb.debian.org/debian buster/main armhf libpotrace0 armhf 1.15-1 [23.9 kB] Get: 135 http://deb.debian.org/debian buster/main armhf libptexenc1 armhf 2018.20181218.49446-1 [58.1 kB] Get: 136 http://deb.debian.org/debian buster/main armhf libsynctex2 armhf 2018.20181218.49446-1 [67.4 kB] Get: 137 http://deb.debian.org/debian buster/main armhf libteckit0 armhf 2.5.8+ds2-5 [246 kB] Get: 138 http://deb.debian.org/debian buster/main armhf libtexlua52 armhf 2018.20181218.49446-1 [86.7 kB] Get: 139 http://deb.debian.org/debian buster/main armhf libtexlua53 armhf 2018.20181218.49446-1 [97.8 kB] Get: 140 http://deb.debian.org/debian buster/main armhf libtexluajit2 armhf 2018.20181218.49446-1 [201 kB] Get: 141 http://deb.debian.org/debian buster/main armhf libwoff1 armhf 1.0.2-1 [35.8 kB] Get: 142 http://deb.debian.org/debian buster/main armhf libxi6 armhf 2:1.7.9-1 [78.4 kB] Get: 143 http://deb.debian.org/debian buster/main armhf libxxhash0 armhf 0.6.5-2 [10.2 kB] Get: 144 http://deb.debian.org/debian buster/main armhf libzzip-0-13 armhf 0.13.62-3.2 [51.6 kB] Get: 145 http://deb.debian.org/debian buster/main armhf preview-latex-style all 11.91-2 [201 kB] Get: 146 http://deb.debian.org/debian buster/main armhf sphinx-common all 1.8.4-1 [500 kB] Get: 147 http://deb.debian.org/debian buster/main armhf t1utils armhf 1.41-3 [54.4 kB] Get: 148 http://deb.debian.org/debian buster/main armhf texlive-binaries armhf 2018.20181218.49446-1 [8656 kB] Get: 149 http://deb.debian.org/debian buster/main armhf xdg-utils all 1.1.3-1+deb10u1 [73.7 kB] Get: 150 http://deb.debian.org/debian buster/main armhf texlive-base all 2018.20190227-2 [19.7 MB] Get: 151 http://deb.debian.org/debian buster/main armhf texlive-fonts-recommended all 2018.20190227-2 [5228 kB] Get: 152 http://deb.debian.org/debian buster/main armhf texlive-latex-base all 2018.20190227-2 [984 kB] Get: 153 http://deb.debian.org/debian buster/main armhf texlive-latex-recommended all 2018.20190227-2 [15.2 MB] Get: 154 http://deb.debian.org/debian buster/main armhf texlive-pictures all 2018.20190227-2 [8201 kB] Get: 155 http://deb.debian.org/debian buster/main armhf texlive-latex-extra all 2018.20190227-2 [12.3 MB] Fetched 146 MB in 20s (7450 kB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libbsd0:armhf. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 18932 files and directories currently installed.) Preparing to unpack .../00-libbsd0_0.9.1-2_armhf.deb ... Unpacking libbsd0:armhf (0.9.1-2) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../01-bsdmainutils_11.1.2+b1_armhf.deb ... Unpacking bsdmainutils (11.1.2+b1) ... Selecting previously unselected package libuchardet0:armhf. Preparing to unpack .../02-libuchardet0_0.0.6-3_armhf.deb ... Unpacking libuchardet0:armhf (0.0.6-3) ... Selecting previously unselected package groff-base. Preparing to unpack .../03-groff-base_1.22.4-3_armhf.deb ... Unpacking groff-base (1.22.4-3) ... Selecting previously unselected package libpipeline1:armhf. Preparing to unpack .../04-libpipeline1_1.5.1-2_armhf.deb ... Unpacking libpipeline1:armhf (1.5.1-2) ... Selecting previously unselected package man-db. Preparing to unpack .../05-man-db_2.8.5-2_armhf.deb ... Unpacking man-db (2.8.5-2) ... Selecting previously unselected package libpython2.7-minimal:armhf. Preparing to unpack .../06-libpython2.7-minimal_2.7.16-2+deb10u1_armhf.deb ... Unpacking libpython2.7-minimal:armhf (2.7.16-2+deb10u1) ... Selecting previously unselected package python2.7-minimal. Preparing to unpack .../07-python2.7-minimal_2.7.16-2+deb10u1_armhf.deb ... Unpacking python2.7-minimal (2.7.16-2+deb10u1) ... Selecting previously unselected package python2-minimal. Preparing to unpack .../08-python2-minimal_2.7.16-1_armhf.deb ... Unpacking python2-minimal (2.7.16-1) ... Selecting previously unselected package python-minimal. Preparing to unpack .../09-python-minimal_2.7.16-1_armhf.deb ... Unpacking python-minimal (2.7.16-1) ... Selecting previously unselected package libssl1.1:armhf. Preparing to unpack .../10-libssl1.1_1.1.1d-0+deb10u3_armhf.deb ... Unpacking libssl1.1:armhf (1.1.1d-0+deb10u3) ... Selecting previously unselected package mime-support. Preparing to unpack .../11-mime-support_3.62_all.deb ... Unpacking mime-support (3.62) ... Selecting previously unselected package libexpat1:armhf. Preparing to unpack .../12-libexpat1_2.2.6-2+deb10u1_armhf.deb ... Unpacking libexpat1:armhf (2.2.6-2+deb10u1) ... Selecting previously unselected package readline-common. Preparing to unpack .../13-readline-common_7.0-5_all.deb ... Unpacking readline-common (7.0-5) ... Selecting previously unselected package libreadline7:armhf. Preparing to unpack .../14-libreadline7_7.0-5_armhf.deb ... Unpacking libreadline7:armhf (7.0-5) ... Selecting previously unselected package libpython2.7-stdlib:armhf. Preparing to unpack .../15-libpython2.7-stdlib_2.7.16-2+deb10u1_armhf.deb ... Unpacking libpython2.7-stdlib:armhf (2.7.16-2+deb10u1) ... Selecting previously unselected package python2.7. Preparing to unpack .../16-python2.7_2.7.16-2+deb10u1_armhf.deb ... Unpacking python2.7 (2.7.16-2+deb10u1) ... Selecting previously unselected package libpython2-stdlib:armhf. Preparing to unpack .../17-libpython2-stdlib_2.7.16-1_armhf.deb ... Unpacking libpython2-stdlib:armhf (2.7.16-1) ... Selecting previously unselected package libpython-stdlib:armhf. Preparing to unpack .../18-libpython-stdlib_2.7.16-1_armhf.deb ... Unpacking libpython-stdlib:armhf (2.7.16-1) ... Setting up libpython2.7-minimal:armhf (2.7.16-2+deb10u1) ... Setting up python2.7-minimal (2.7.16-2+deb10u1) ... Setting up python2-minimal (2.7.16-1) ... Selecting previously unselected package python2. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20397 files and directories currently installed.) Preparing to unpack .../python2_2.7.16-1_armhf.deb ... Unpacking python2 (2.7.16-1) ... Setting up python-minimal (2.7.16-1) ... Selecting previously unselected package python. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20430 files and directories currently installed.) Preparing to unpack .../000-python_2.7.16-1_armhf.deb ... Unpacking python (2.7.16-1) ... Selecting previously unselected package poppler-data. Preparing to unpack .../001-poppler-data_0.4.9-2_all.deb ... Unpacking poppler-data (0.4.9-2) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../002-sensible-utils_0.0.12_all.deb ... Unpacking sensible-utils (0.0.12) ... Selecting previously unselected package ucf. Preparing to unpack .../003-ucf_3.0038+nmu1_all.deb ... Moving old data out of the way Unpacking ucf (3.0038+nmu1) ... Selecting previously unselected package tex-common. Preparing to unpack .../004-tex-common_6.11_all.deb ... Unpacking tex-common (6.11) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../005-libmagic-mgc_1%3a5.35-4+deb10u1_armhf.deb ... Unpacking libmagic-mgc (1:5.35-4+deb10u1) ... Selecting previously unselected package libmagic1:armhf. Preparing to unpack .../006-libmagic1_1%3a5.35-4+deb10u1_armhf.deb ... Unpacking libmagic1:armhf (1:5.35-4+deb10u1) ... Selecting previously unselected package file. Preparing to unpack .../007-file_1%3a5.35-4+deb10u1_armhf.deb ... Unpacking file (1:5.35-4+deb10u1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../008-gettext-base_0.19.8.1-9_armhf.deb ... Unpacking gettext-base (0.19.8.1-9) ... 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Setting up xdg-utils (1.1.3-1+deb10u1) ... Setting up libsynctex2:armhf (2018.20181218.49446-1) ... Setting up libreadline7:armhf (7.0-5) ... Setting up libjs-underscore (1.9.1~dfsg-1) ... Setting up libpotrace0:armhf (1.15-1) ... Setting up libfile-stripnondeterminism-perl (1.1.2-1) ... Setting up libice6:armhf (2:1.0.9-2) ... Setting up libxdmcp6:armhf (1:1.1.2-3) ... Setting up libxcb1:armhf (1.13.1-2) ... Setting up libwoff1:armhf (1.0.2-1) ... Setting up libtool (2.4.6-9) ... Setting up libxcb-render0:armhf (1.13.1-2) ... Setting up libedit2:armhf (3.1-20181209-1) ... Setting up libavahi-common3:armhf (0.7-4+b1) ... Setting up m4 (1.4.18-2) ... Setting up libxcb-shm0:armhf (1.13.1-2) ... Setting up libllvm6.0:armhf (1:6.0.1-10) ... Setting up libclang1-6.0:armhf (1:6.0.1-10) ... Setting up libpython2.7-stdlib:armhf (2.7.16-2+deb10u1) ... Setting up libthai0:armhf (0.1.28-2) ... Setting up doxygen (1.8.13-10) ... Setting up libptexenc1:armhf (2018.20181218.49446-1) ... Setting up libfreetype6:armhf (2.9.1-3+deb10u1) ... Setting up bsdmainutils (11.1.2+b1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libgssapi-krb5-2:armhf (1.17-3) ... Setting up libcroco3:armhf (0.6.12-3) ... Setting up ucf (3.0038+nmu1) ... Setting up libjs-sphinxdoc (1.8.4-1) ... Setting up autoconf (2.69-11) ... Setting up libgvpr2 (2.40.1-6) ... Setting up dwz (0.12-3) ... Setting up groff-base (1.22.4-3) ... Setting up libx11-6:armhf (2:1.6.7-1+deb10u1) ... Setting up libharfbuzz0b:armhf (2.3.1-1) ... Setting up libsm6:armhf (2:1.2.3-1) ... Setting up libavahi-client3:armhf (0.7-4+b1) ... Setting up automake (1:1.16.1-4) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libpaper1:armhf (1.1.28) ... Creating config file /etc/papersize with new version Setting up gettext (0.19.8.1-9) ... Setting up libharfbuzz-icu0:armhf (2.3.1-1) ... Setting up libxpm4:armhf (1:3.5.12-1) ... Setting up python2.7 (2.7.16-2+deb10u1) ... Setting up libxrender1:armhf (1:0.9.10-1) ... Setting up libpython2-stdlib:armhf (2.7.16-1) ... Setting up fontconfig-config (2.13.1-2) ... Setting up libxext6:armhf (2:1.3.3-1+b2) ... Setting up libpaper-utils (1.1.28) ... Setting up man-db (2.8.5-2) ... Not building database; man-db/auto-update is not 'true'. Setting up python2 (2.7.16-1) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up tex-common (6.11) ... update-language: texlive-base not installed and configured, doing nothing! Setting up libpython-stdlib:armhf (2.7.16-1) ... Setting up sphinx-common (1.8.4-1) ... Setting up libxt6:armhf (1:1.1.5-1+b3) ... Setting up libcups2:armhf (2.2.10-6+deb10u3) ... Setting up libfontconfig1:armhf (2.13.1-2) ... Setting up python (2.7.16-1) ... Setting up fontconfig (2.13.1-2) ... Regenerating fonts cache... done. Setting up libxmu6:armhf (2:1.1.2-2+b3) ... Setting up libxi6:armhf (2:1.7.9-1) ... Setting up po-debconf (1.0.21) ... Setting up preview-latex-style (11.91-2) ... Setting up libpango-1.0-0:armhf (1.42.4-8~deb10u1) ... Setting up libxaw7:armhf (2:1.0.13-1+b2) ... Setting up libcairo2:armhf (1.16.0-4) ... Setting up libcupsimage2:armhf (2.2.10-6+deb10u3) ... Setting up libgd3:armhf (2.2.5-5.2) ... Setting up libpangoft2-1.0-0:armhf (1.42.4-8~deb10u1) ... Setting up libpangocairo-1.0-0:armhf (1.42.4-8~deb10u1) ... Setting up libgs9:armhf (9.27~dfsg-2+deb10u4) ... Setting up libgvc6 (2.40.1-6) ... Setting up texlive-binaries (2018.20181218.49446-1) ... update-alternatives: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin (xdvi.bin) in auto mode update-alternatives: using /usr/bin/bibtex.original to provide /usr/bin/bibtex (bibtex) in auto mode Setting up texlive-base (2018.20190227-2) ... tl-paper: setting paper size for dvips to a4: /var/lib/texmf/dvips/config/config-paper.ps tl-paper: setting paper size for dvipdfmx to a4: /var/lib/texmf/dvipdfmx/dvipdfmx-paper.cfg tl-paper: setting paper size for xdvi to a4: /var/lib/texmf/xdvi/XDvi-paper tl-paper: setting paper size for pdftex to a4: /var/lib/texmf/tex/generic/config/pdftexconfig.tex Setting up graphviz (2.40.1-6) ... Setting up texlive-latex-base (2018.20190227-2) ... Setting up texlive-latex-recommended (2018.20190227-2) ... Setting up texlive-pictures (2018.20190227-2) ... Setting up texlive-fonts-recommended (2018.20190227-2) ... Setting up texlive-latex-extra (2018.20190227-2) ... Setting up dh-autoreconf (19) ... Setting up dh-strip-nondeterminism (1.1.2-1) ... Setting up debhelper (12.1.1) ... Setting up dh-linktree (0.6) ... Processing triggers for libc-bin (2.28-10) ... Processing triggers for tex-common (6.11) ... Running updmap-sys. This may take some time... done. Running mktexlsr /var/lib/texmf ... done. Building format(s) --all. This may take some time... done. Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps Reading package lists... Building dependency tree... Reading state information... fakeroot is already the newest version (1.23-1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package I: Running cd /build/librostlab-1.0.20/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b dpkg-buildpackage: info: source package librostlab dpkg-buildpackage: info: source version 1.0.20-8 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf fakeroot debian/rules clean dh clean --with linktree dh_clean debian/rules build dh build --with linktree dh_update_autotools_config dh_autoreconf configure.ac:9: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:193: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2672: _AC_LINK_IFELSE is expanded from... ../../lib/autoconf/general.m4:2689: AC_LINK_IFELSE is expanded from... m4/libtool.m4:1022: _LT_SYS_MODULE_PATH_AIX is expanded from... m4/libtool.m4:4170: _LT_LINKER_SHLIBS is expanded from... m4/libtool.m4:5253: _LT_LANG_C_CONFIG is expanded from... m4/libtool.m4:138: _LT_SETUP is expanded from... m4/libtool.m4:67: LT_INIT is expanded from... m4/libtool.m4:102: AC_PROG_LIBTOOL is expanded from... configure.ac:9: the top level configure.ac:9: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:193: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2672: _AC_LINK_IFELSE is expanded from... ../../lib/autoconf/general.m4:2689: AC_LINK_IFELSE is expanded from... m4/libtool.m4:4170: _LT_LINKER_SHLIBS is expanded from... m4/libtool.m4:5253: _LT_LANG_C_CONFIG is expanded from... m4/libtool.m4:138: _LT_SETUP is expanded from... m4/libtool.m4:67: LT_INIT is expanded from... m4/libtool.m4:102: AC_PROG_LIBTOOL is expanded from... configure.ac:9: the top level configure.ac:9: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:193: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2672: _AC_LINK_IFELSE is expanded from... ../../lib/autoconf/general.m4:2689: AC_LINK_IFELSE is expanded from... m4/libtool.m4:1022: _LT_SYS_MODULE_PATH_AIX is expanded from... m4/libtool.m4:5360: _LT_LANG_CXX_CONFIG is expanded from... m4/libtool.m4:785: _LT_LANG is expanded from... m4/libtool.m4:768: LT_LANG is expanded from... m4/libtool.m4:796: _LT_LANG_DEFAULT_CONFIG is expanded from... m4/libtool.m4:138: _LT_SETUP is expanded from... m4/libtool.m4:67: LT_INIT is expanded from... m4/libtool.m4:102: AC_PROG_LIBTOOL is expanded from... configure.ac:9: the top level configure.ac:9: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:193: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2672: _AC_LINK_IFELSE is expanded from... ../../lib/autoconf/general.m4:2689: AC_LINK_IFELSE is expanded from... m4/libtool.m4:1022: _LT_SYS_MODULE_PATH_AIX is expanded from... m4/libtool.m4:4170: _LT_LINKER_SHLIBS is expanded from... m4/libtool.m4:5253: _LT_LANG_C_CONFIG is expanded from... m4/libtool.m4:138: _LT_SETUP is expanded from... m4/libtool.m4:67: LT_INIT is expanded from... m4/libtool.m4:102: AC_PROG_LIBTOOL is expanded from... configure.ac:9: the top level configure.ac:9: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:193: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2672: _AC_LINK_IFELSE is expanded from... ../../lib/autoconf/general.m4:2689: AC_LINK_IFELSE is expanded from... m4/libtool.m4:4170: _LT_LINKER_SHLIBS is expanded from... m4/libtool.m4:5253: _LT_LANG_C_CONFIG is expanded from... m4/libtool.m4:138: _LT_SETUP is expanded from... m4/libtool.m4:67: LT_INIT is expanded from... m4/libtool.m4:102: AC_PROG_LIBTOOL is expanded from... configure.ac:9: the top level configure.ac:9: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:193: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2672: _AC_LINK_IFELSE is expanded from... ../../lib/autoconf/general.m4:2689: AC_LINK_IFELSE is expanded from... m4/libtool.m4:1022: _LT_SYS_MODULE_PATH_AIX is expanded from... m4/libtool.m4:5360: _LT_LANG_CXX_CONFIG is expanded from... m4/libtool.m4:785: _LT_LANG is expanded from... m4/libtool.m4:768: LT_LANG is expanded from... m4/libtool.m4:796: _LT_LANG_DEFAULT_CONFIG is expanded from... m4/libtool.m4:138: _LT_SETUP is expanded from... m4/libtool.m4:67: LT_INIT is expanded from... m4/libtool.m4:102: AC_PROG_LIBTOOL is expanded from... configure.ac:9: the top level configure.ac:9: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:193: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2672: _AC_LINK_IFELSE is expanded from... ../../lib/autoconf/general.m4:2689: AC_LINK_IFELSE is expanded from... m4/libtool.m4:1022: _LT_SYS_MODULE_PATH_AIX is expanded from... m4/libtool.m4:4170: _LT_LINKER_SHLIBS is expanded from... m4/libtool.m4:5253: _LT_LANG_C_CONFIG is expanded from... m4/libtool.m4:138: _LT_SETUP is expanded from... m4/libtool.m4:67: LT_INIT is expanded from... m4/libtool.m4:102: AC_PROG_LIBTOOL is expanded from... configure.ac:9: the top level configure.ac:9: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:193: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2672: _AC_LINK_IFELSE is expanded from... ../../lib/autoconf/general.m4:2689: AC_LINK_IFELSE is expanded from... m4/libtool.m4:4170: _LT_LINKER_SHLIBS is expanded from... m4/libtool.m4:5253: _LT_LANG_C_CONFIG is expanded from... m4/libtool.m4:138: _LT_SETUP is expanded from... m4/libtool.m4:67: LT_INIT is expanded from... m4/libtool.m4:102: AC_PROG_LIBTOOL is expanded from... configure.ac:9: the top level configure.ac:9: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:193: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2672: _AC_LINK_IFELSE is expanded from... ../../lib/autoconf/general.m4:2689: AC_LINK_IFELSE is expanded from... m4/libtool.m4:1022: _LT_SYS_MODULE_PATH_AIX is expanded from... m4/libtool.m4:5360: _LT_LANG_CXX_CONFIG is expanded from... m4/libtool.m4:785: _LT_LANG is expanded from... m4/libtool.m4:768: LT_LANG is expanded from... m4/libtool.m4:796: _LT_LANG_DEFAULT_CONFIG is expanded from... m4/libtool.m4:138: _LT_SETUP is expanded from... m4/libtool.m4:67: LT_INIT is expanded from... m4/libtool.m4:102: AC_PROG_LIBTOOL is expanded from... configure.ac:9: the top level libtoolize: putting auxiliary files in '.'. libtoolize: copying file './ltmain.sh' libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'. libtoolize: copying file 'm4/libtool.m4' libtoolize: copying file 'm4/ltoptions.m4' libtoolize: copying file 'm4/ltsugar.m4' libtoolize: copying file 'm4/ltversion.m4' libtoolize: copying file 'm4/lt~obsolete.m4' configure.ac:7: installing './compile' configure.ac:5: installing './missing' lib/Makefile.am: installing './depcomp' debian/rules override_dh_auto_configure make[1]: Entering directory '/build/librostlab-1.0.20' dh_auto_configure -- --enable-doxygen-dot --enable-doxygen-pdf ./configure --build=arm-linux-gnueabihf --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-silent-rules --libdir=\${prefix}/lib/arm-linux-gnueabihf --libexecdir=\${prefix}/lib/arm-linux-gnueabihf --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking --enable-doxygen-dot --enable-doxygen-pdf configure: WARNING: unrecognized options: --disable-maintainer-mode checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking whether gcc understands -c and -o together... yes checking whether make supports the include directive... yes (GNU style) checking dependency style of gcc... none checking for g++... g++ checking whether we are using the GNU C++ compiler... yes checking whether g++ accepts -g... yes checking dependency style of g++... none checking build system type... arm-unknown-linux-gnueabihf checking host system type... arm-unknown-linux-gnueabihf checking how to print strings... printf checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert arm-unknown-linux-gnueabihf file names to arm-unknown-linux-gnueabihf format... func_convert_file_noop checking how to convert arm-unknown-linux-gnueabihf file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ar... ar checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for a working dd... /bin/dd checking how to truncate binary pipes... /bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... no checking how to run the C preprocessor... gcc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... yes checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking how to run the C++ preprocessor... g++ -E checking for ld used by g++... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes checking for g++ option to produce PIC... -fPIC -DPIC checking if g++ PIC flag -fPIC -DPIC works... yes checking if g++ static flag -static works... yes checking if g++ supports -c -o file.o... yes checking if g++ supports -c -o file.o... (cached) yes checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... 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Searching for files in directory /build/librostlab-1.0.20/lib/rostlab Reading and parsing tag files Parsing files Preprocessing /build/librostlab-1.0.20/lib/rostlab/aux_functions.h... Parsing file /build/librostlab-1.0.20/lib/rostlab/aux_functions.h... Preprocessing /build/librostlab-1.0.20/lib/rostlab/blosum62.h... Parsing file /build/librostlab-1.0.20/lib/rostlab/blosum62.h... Preprocessing /build/librostlab-1.0.20/lib/rostlab/cwd_resource.h... Parsing file /build/librostlab-1.0.20/lib/rostlab/cwd_resource.h... Preprocessing /build/librostlab-1.0.20/lib/rostlab/cxxgrp.h... Parsing file /build/librostlab-1.0.20/lib/rostlab/cxxgrp.h... Preprocessing /build/librostlab-1.0.20/lib/rostlab/cxxpwd.h... Parsing file /build/librostlab-1.0.20/lib/rostlab/cxxpwd.h... Preprocessing /build/librostlab-1.0.20/lib/rostlab/euid_egid_resource.h... Parsing file /build/librostlab-1.0.20/lib/rostlab/euid_egid_resource.h... Preprocessing /build/librostlab-1.0.20/lib/rostlab/file_lock_resource.h... 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Building file list... Building class list... Associating documentation with classes... Computing nesting relations for classes... Building example list... Searching for enumerations... Searching for documented typedefs... Searching for members imported via using declarations... Searching for included using directives... Searching for documented variables... Building interface member list... Building member list... Searching for friends... Searching for documented defines... Computing class inheritance relations... Computing class usage relations... Flushing cached template relations that have become invalid... Computing class relations... Add enum values to enums... Searching for member function documentation... Creating members for template instances... Building page list... Search for main page... Computing page relations... Determining the scope of groups... Sorting lists... Freeing entry tree Determining which enums are documented Computing member relations... Building full member lists recursively... Adding members to member groups. Computing member references... Inheriting documentation... Generating disk names... Adding source references... Adding xrefitems... Sorting member lists... Computing dependencies between directories... Generating citations page... Counting data structures... Resolving user defined references... Finding anchors and sections in the documentation... Transferring function references... Combining using relations... Adding members to index pages... Generating style sheet... Generating search indices... Generating example documentation... Generating file sources... Generating code for file rostlab/aux_functions.h... Generating code for file rostlab/blosum62.h... Generating code for file rostlab/cwd_resource.h... Generating code for file rostlab/cxxgrp.h... Generating code for file rostlab/cxxpwd.h... Generating code for file rostlab/euid_egid_resource.h... Generating code for file rostlab/file_lock_resource.h... 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LaTeX Warning: Reference `umask__resource_8h' on page 7 undefined on input line 15. ) [7] [8] Chapter 5. (./namespacerostlab.tex (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1phv.fd) [9] [10] (/usr/share/texlive/texmf-dist/tex/latex/psnfss/t1pcr.fd) LaTeX Font Warning: Font shape `T1/pcr/bc/n' undefined (Font) using `T1/pcr/m/n' instead on input line 157. [11] [12] [13] [14] [15] [16] [17]) (./namespacerostlab_1_1bio.tex [18]) (./namespacerostlab_1_1bio_1_1fmt.tex) [19] [20] Chapter 6. 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(./refman.aux) Package rerunfilecheck Warning: File `refman.out' has changed. (rerunfilecheck) Rerun to get outlines right (rerunfilecheck) or use package `bookmark'. LaTeX Font Warning: Some font shapes were not available, defaults substituted. LaTeX Warning: There were undefined references. LaTeX Warning: Label(s) may have changed. Rerun to get cross-references right. ){/usr/share/texlive/texmf-dist/fonts/enc/dvips/base/8r.enc} Output written on refman.pdf (58 pages, 391305 bytes). Transcript written on refman.log. This is makeindex, version 2.15 [TeX Live 2019/dev] (kpathsea + Thai support). Scanning input file refman.idx....done (200 entries accepted, 0 rejected). Sorting entries.....done (1542 comparisons). Generating output file refman.ind....done (280 lines written, 0 warnings). Output written in refman.ind. Transcript written in refman.ilg. 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(./aux__functions_8h.tex [45 <./aux__functions_8h__incl.pdf>]) (./blosum62_8h.tex) (./cwd__resource_8h.tex [46 <./cwd__resource_8h__incl.pdf>] ) (./cxxgrp_8h.tex) (./cxxpwd_8h.tex [47 <./cxxgrp_8h__incl.pdf>]) (./euid__egid__resource_8h.tex [48 <./cxxpwd_8h__incl.pdf>]) (./file__lock__resource_8h.tex) (./mapAA2int_8h.tex [49 <./euid__egid__resource _8h__incl.pdf> <./file__lock__resource_8h__incl.pdf pdfTeX warning: /usr/bin/pdflatex (file ./file__lock__resource_8h__incl.pdf): P DF inclusion: multiple pdfs with page group included in a single page >]) (./readFasta_8h.tex [50 <./mapAA2int_8h__incl.pdf> <./readFasta_8h__incl.pd f pdfTeX warning: /usr/bin/pdflatex (file ./readFasta_8h__incl.pdf): PDF inclusio n: multiple pdfs with page group included in a single page >]) (./rostlab__stdexcept_8h.tex) (./rostlab__stdio_8h.tex [51 <./rostlab__stde xcept_8h__incl.pdf> <./rostlab__stdexcept_8h__dep__incl.pdf pdfTeX warning: /usr/bin/pdflatex (file ./rostlab__stdexcept_8h__dep__incl.pdf) : PDF inclusion: multiple pdfs with page group included in a single page >]) (./rostlab__stdlib_8h.tex [52 <./rostlab__stdio_8h__incl.pdf>]) (./umask__resource_8h.tex [53 <./rostlab__stdlib_8h__incl.pdf>]) [54 <./umask__ resource_8h__incl.pdf>] (./refman.ind [55] [56] [57]) (./refman.aux) Package rerunfilecheck Warning: File `refman.out' has changed. (rerunfilecheck) Rerun to get outlines right (rerunfilecheck) or use package `bookmark'. LaTeX Font Warning: Some font shapes were not available, defaults substituted. ){/usr/share/texlive/texmf-dist/fonts/enc/dvips/base/8r.enc} Output written on refman.pdf (65 pages, 423280 bytes). Transcript written on refman.log. make[2]: Leaving directory '/build/librostlab-1.0.20/lib' make[1]: Leaving directory '/build/librostlab-1.0.20' dh_auto_test make -j3 check VERBOSE=1 make[1]: Entering directory '/build/librostlab-1.0.20' Making check in lib make[2]: Entering directory '/build/librostlab-1.0.20/lib' make check-am make[3]: Entering directory '/build/librostlab-1.0.20/lib' make[3]: Nothing to be done for 'check-am'. make[3]: Leaving directory '/build/librostlab-1.0.20/lib' make[2]: Leaving directory '/build/librostlab-1.0.20/lib' make[2]: Entering directory '/build/librostlab-1.0.20' make[2]: Leaving directory '/build/librostlab-1.0.20' make[1]: Leaving directory '/build/librostlab-1.0.20' create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary dh binary --with linktree dh_testroot dh_prep dh_auto_install make -j1 install DESTDIR=/build/librostlab-1.0.20/debian/tmp AM_UPDATE_INFO_DIR=no make[1]: Entering directory '/build/librostlab-1.0.20' Making install in lib make[2]: Entering directory '/build/librostlab-1.0.20/lib' make install-am make[3]: Entering directory '/build/librostlab-1.0.20/lib' make[4]: Entering directory '/build/librostlab-1.0.20/lib' /bin/mkdir -p '/build/librostlab-1.0.20/debian/tmp/usr/lib/arm-linux-gnueabihf' /bin/bash ../libtool --mode=install /usr/bin/install -c librostlab.la '/build/librostlab-1.0.20/debian/tmp/usr/lib/arm-linux-gnueabihf' libtool: install: /usr/bin/install -c .libs/librostlab.so.3.0.0 /build/librostlab-1.0.20/debian/tmp/usr/lib/arm-linux-gnueabihf/librostlab.so.3.0.0 libtool: install: (cd /build/librostlab-1.0.20/debian/tmp/usr/lib/arm-linux-gnueabihf && { ln -s -f librostlab.so.3.0.0 librostlab.so.3 || { rm -f librostlab.so.3 && ln -s librostlab.so.3.0.0 librostlab.so.3; }; }) libtool: install: (cd /build/librostlab-1.0.20/debian/tmp/usr/lib/arm-linux-gnueabihf && { ln -s -f librostlab.so.3.0.0 librostlab.so || { rm -f librostlab.so && ln -s librostlab.so.3.0.0 librostlab.so; }; }) libtool: install: /usr/bin/install -c .libs/librostlab.lai /build/librostlab-1.0.20/debian/tmp/usr/lib/arm-linux-gnueabihf/librostlab.la libtool: install: /usr/bin/install -c .libs/librostlab.a /build/librostlab-1.0.20/debian/tmp/usr/lib/arm-linux-gnueabihf/librostlab.a libtool: install: chmod 644 /build/librostlab-1.0.20/debian/tmp/usr/lib/arm-linux-gnueabihf/librostlab.a libtool: install: ranlib /build/librostlab-1.0.20/debian/tmp/usr/lib/arm-linux-gnueabihf/librostlab.a libtool: warning: remember to run 'libtool --finish /usr/lib/arm-linux-gnueabihf' /bin/mkdir -p '/build/librostlab-1.0.20/debian/tmp/usr/include/rostlab' /usr/bin/install -c -m 644 rostlab/aux_functions.h rostlab/blosum62.h rostlab/cwd_resource.h rostlab/cxxgrp.h rostlab/cxxpwd.h rostlab/euid_egid_resource.h rostlab/file_lock_resource.h rostlab/mapAA2int.h rostlab/readFasta.h rostlab/rostlab_stdexcept.h rostlab/rostlab_stdio.h rostlab/rostlab_stdlib.h rostlab/umask_resource.h '/build/librostlab-1.0.20/debian/tmp/usr/include/rostlab' make[4]: Leaving directory '/build/librostlab-1.0.20/lib' make[3]: Leaving directory '/build/librostlab-1.0.20/lib' make[2]: Leaving directory '/build/librostlab-1.0.20/lib' make[2]: Entering directory '/build/librostlab-1.0.20' make[3]: Entering directory '/build/librostlab-1.0.20' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/build/librostlab-1.0.20' make[2]: Leaving directory '/build/librostlab-1.0.20' make[1]: Leaving directory '/build/librostlab-1.0.20' debian/rules override_dh_install make[1]: Entering directory '/build/librostlab-1.0.20' dh_install d-shlibmove --commit \ --multiarch \ --exclude-la \ --movedev debian/tmp/usr/include/* usr/include \ debian/tmp/usr/lib/*/*.so Library package automatic movement utility set -e install -d -m 755 debian/librostlab3-dev/usr/lib/arm-linux-gnueabihf install -d -m 755 debian/librostlab3/usr/lib/arm-linux-gnueabihf mv debian/tmp/usr/lib/arm-linux-gnueabihf/librostlab.a debian/librostlab3-dev/usr/lib/arm-linux-gnueabihf mv debian/tmp/usr/lib/arm-linux-gnueabihf/librostlab.so debian/librostlab3-dev/usr/lib/arm-linux-gnueabihf mv /build/librostlab-1.0.20/debian/tmp/usr/lib/arm-linux-gnueabihf/librostlab.so.3 debian/librostlab3/usr/lib/arm-linux-gnueabihf mv /build/librostlab-1.0.20/debian/tmp/usr/lib/arm-linux-gnueabihf/librostlab.so.3.0.0 debian/librostlab3/usr/lib/arm-linux-gnueabihf PKGDEV=librostlab3-dev PKGSHL=librostlab3 install -d -m 755 debian/librostlab3-dev/usr/include mv debian/tmp/usr/include/rostlab debian/librostlab3-dev/usr/include make[1]: Leaving directory '/build/librostlab-1.0.20' debian/rules override_dh_installdocs make[1]: Entering directory '/build/librostlab-1.0.20' dh_installdocs dh_installdocs: Cannot auto-detect main package for librostlab-doc. If the default is wrong, please use --doc-main-package find debian -name "*_*.md5" -delete make[1]: Leaving directory '/build/librostlab-1.0.20' dh_installchangelogs dh_installexamples dh_perl dh_link dh_linktree dh_strip_nondeterminism debian/rules override_dh_compress make[1]: Entering directory '/build/librostlab-1.0.20' dh_compress -Xlibrostlab.tag make[1]: Leaving directory '/build/librostlab-1.0.20' dh_fixperms dh_missing dh_strip dh_makeshlibs dh_shlibdeps dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/librostlab3/usr/lib/arm-linux-gnueabihf/librostlab.so.3.0.0 was not linked against libgcc_s.so.1 (it uses none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/librostlab3/usr/lib/arm-linux-gnueabihf/librostlab.so.3.0.0 was not linked against libstdc++.so.6 (it uses none of the library's symbols) dh_installdeb dh_gencontrol dpkg-gencontrol: warning: Depends field of package librostlab-doc: substitution variable ${shlibs:Depends} used, but is not defined dpkg-gencontrol: warning: Depends field of package librostlab-doc: substitution variable ${js:Depends} used, but is not defined dh_md5sums dh_builddeb dpkg-deb: building package 'librostlab3' in '../librostlab3_1.0.20-8_armhf.deb'. dpkg-deb: building package 'librostlab3-dev' in '../librostlab3-dev_1.0.20-8_armhf.deb'. dpkg-deb: building package 'librostlab3-dbgsym' in '../librostlab3-dbgsym_1.0.20-8_armhf.deb'. dpkg-deb: building package 'librostlab-doc' in '../librostlab-doc_1.0.20-8_all.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../librostlab_1.0.20-8_armhf.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/32092 and its subdirectories I: Current time: Thu Oct 22 14:06:12 -12 2020 I: pbuilder-time-stamp: 1603418772 Fri Oct 23 02:06:22 UTC 2020 I: 1st build successful. Starting 2nd build on remote node ff2a-armhf-rb.debian.net. Fri Oct 23 02:06:22 UTC 2020 I: Preparing to do remote build '2' on ff2a-armhf-rb.debian.net. Fri Oct 23 02:15:21 UTC 2020 I: Deleting $TMPDIR on ff2a-armhf-rb.debian.net. Fri Oct 23 02:15:23 UTC 2020 I: librostlab_1.0.20-8_armhf.changes: Format: 1.8 Date: Thu, 20 Sep 2018 11:06:29 +0200 Source: librostlab Binary: librostlab-doc librostlab3 librostlab3-dbgsym librostlab3-dev Architecture: all armhf Version: 1.0.20-8 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: librostlab-doc - C++ library for computational biology (documentation) librostlab3 - C++ library for computational biology librostlab3-dev - C++ library for computational biology (development) Changes: librostlab (1.0.20-8) unstable; urgency=medium . * Drop unneeded get-orig-source target * Use d-shlibs * debhelper 11 * Point Vcs fields to salsa.debian.org * Standards-Version: 4.2.1 Checksums-Sha1: 1a34ed4e12d058e965de3261f6cfe0dd339440ff 787144 librostlab-doc_1.0.20-8_all.deb 4d3f9850f99ac7ab1ed056c3fc6793c41b7557f0 2624 librostlab3-dbgsym_1.0.20-8_armhf.deb c3ab6635d9b104c4ce762245873205b23e5f9bc2 13684 librostlab3-dev_1.0.20-8_armhf.deb 2ee5e7925de487196b771e5be6a88fa962dd0596 6160 librostlab3_1.0.20-8_armhf.deb 4cfb2b85bb3d3c75a4af13fff315fbbb7e5af85b 9309 librostlab_1.0.20-8_armhf.buildinfo Checksums-Sha256: a5e2c9f73e1a7a348c865453c38bd2e972e09186ee42802d3045196be21f4439 787144 librostlab-doc_1.0.20-8_all.deb 242c2c7b9229f26265835a866ff29c1275d8fa7d24a09ac67ca96501d1b147e3 2624 librostlab3-dbgsym_1.0.20-8_armhf.deb 28e9bc1ed1835061b800fb0fc3fa1fa5dee7642fe3bb6ce6b5b34ac21429a6c8 13684 librostlab3-dev_1.0.20-8_armhf.deb d5dff583686c2beebaab07291dd5d0c217419b011c0a8313f01c94ff95bd06f2 6160 librostlab3_1.0.20-8_armhf.deb 7304347d98842e1f6c94fdb667d42225817908a7f7227214b10b59a139c863de 9309 librostlab_1.0.20-8_armhf.buildinfo Files: d312fb2bc6d9ddb68e49f8cfc30fa634 787144 doc optional librostlab-doc_1.0.20-8_all.deb 4a3caabbd75efcbd6c3920aa8fb85ff4 2624 debug optional librostlab3-dbgsym_1.0.20-8_armhf.deb 8b5c218f4374485edfd2d653434b70ff 13684 libdevel optional librostlab3-dev_1.0.20-8_armhf.deb 1ab5850c7c4f2eec85d4422235e8dc48 6160 libs optional librostlab3_1.0.20-8_armhf.deb d7937ac2e10f9c6459c93d3ac37577fa 9309 science optional librostlab_1.0.20-8_armhf.buildinfo Fri Oct 23 02:15:25 UTC 2020 I: diffoscope 161 will be used to compare the two builds: # Profiling output for: /usr/bin/diffoscope --html /srv/reproducible-results/rbuild-debian/tmp.NHDPDEgc04/librostlab_1.0.20-8.diffoscope.html --text /srv/reproducible-results/rbuild-debian/tmp.NHDPDEgc04/librostlab_1.0.20-8.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/tmp.NHDPDEgc04/librostlab_1.0.20-8.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/tmp.NHDPDEgc04/b1/librostlab_1.0.20-8_armhf.changes /srv/reproducible-results/rbuild-debian/tmp.NHDPDEgc04/b2/librostlab_1.0.20-8_armhf.changes ## close_archive (total time: 0.000s) 0.000s 6 calls diffoscope.comparators.xz.XzContainer 0.000s 2 calls diffoscope.comparators.gzip.GzipContainer 0.000s 2 calls diffoscope.comparators.deb.DebContainer 0.000s 4 calls diffoscope.comparators.tar.TarContainer 0.000s 2 calls diffoscope.comparators.deb.DebTarContainer ## command (total time: 2.853s) 1.345s 36 calls diff 0.919s 10 calls xxd 0.247s 11 calls pdftotext 0.206s 6 calls xz 0.080s 6 calls cmp 0.056s 2 calls gzip 0.001s 10 calls cmp (internal) ## compare_files (cumulative) (total time: 21.650s) 4.274s 1 call abc.DotChangesFile 4.021s 1 call abc.DebFile 3.908s 2 calls abc.XzFile 3.525s 1 call abc.DebDataTarFile 2.942s 1 call abc.GzipFile 2.832s 1 call abc.PdfFile 0.119s 1 call abc.TarFile 0.029s 1 call abc.Md5sumsFile ## container_extract (total time: 0.405s) 0.207s 6 calls diffoscope.comparators.xz.XzContainer 0.126s 598 calls diffoscope.comparators.deb.DebTarContainer 0.057s 2 calls diffoscope.comparators.gzip.GzipContainer 0.011s 8 calls diffoscope.comparators.deb.DebContainer 0.004s 6 calls diffoscope.comparators.tar.TarContainer ## has_same_content_as (total time: 0.084s) 0.029s 4 calls abc.DebFile 0.019s 2 calls abc.XzFile 0.013s 1 call abc.DebDataTarFile 0.011s 1 call abc.GzipFile 0.010s 1 call abc.PdfFile 0.000s 2 calls abc.TextFile 0.000s 1 call diffoscope.comparators.utils.libarchive.LibarchiveSymlink 0.000s 2 calls abc.Md5sumsFile 0.000s 1 call abc.TarFile 0.000s 1 call abc.DotChangesFile ## main (total time: 2622.082s) 2621.931s 2 calls outputs 0.151s 1 call cleanup ## open_archive (total time: 0.000s) 0.000s 6 calls diffoscope.comparators.xz.XzContainer 0.000s 2 calls diffoscope.comparators.deb.DebContainer 0.000s 4 calls diffoscope.comparators.tar.TarContainer 0.000s 2 calls diffoscope.comparators.deb.DebTarContainer 0.000s 2 calls diffoscope.comparators.gzip.GzipContainer ## output (total time: 2616.710s) 2616.614s 1 call html 0.058s 1 call text 0.038s 1 call json ## recognizes (total time: 0.234s) 0.132s 508 calls diffoscope.comparators.utils.libarchive.LibarchiveMember 0.054s 320 calls diffoscope.comparators.utils.archive.ArchiveMember 0.033s 10 calls diffoscope.comparators.binary.FilesystemFile 0.014s 176 calls diffoscope.comparators.debian.DebControlMember 0.000s 14 calls abc.Md5sumsFile 0.000s 8 calls abc.DotChangesFile 0.000s 4 calls diffoscope.comparators.utils.libarchive.LibarchiveSymlink Fri Oct 23 02:59:09 UTC 2020 E: librostlab failed to build reproducibly in buster on armhf. Fri Oct 23 02:59:14 UTC 2020 I: Submitting .buildinfo files to external archives: Fri Oct 23 02:59:14 UTC 2020 I: Submitting 12K b1/librostlab_1.0.20-8_armhf.buildinfo.asc Fri Oct 23 02:59:15 UTC 2020 I: Submitting 12K b2/librostlab_1.0.20-8_armhf.buildinfo.asc Fri Oct 23 02:59:16 UTC 2020 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Fri Oct 23 02:59:16 UTC 2020 I: Done submitting .buildinfo files. Fri Oct 23 02:59:16 UTC 2020 I: Removing signed librostlab_1.0.20-8_armhf.buildinfo.asc files: removed './b1/librostlab_1.0.20-8_armhf.buildinfo.asc' removed './b2/librostlab_1.0.20-8_armhf.buildinfo.asc'