Mon Jun 8 22:41:25 UTC 2020 I: starting to build ergo/buster/armhf on jenkins on '2020-06-08 22:41' Mon Jun 8 22:41:25 UTC 2020 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/armhf_49/1953/console.log Mon Jun 8 22:41:25 UTC 2020 I: Downloading source for buster/ergo=3.5-1 --2020-06-08 22:41:26-- http://deb.debian.org/debian/pool/main/e/ergo/ergo_3.5-1.dsc Connecting to 78.137.99.97:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 1914 (1.9K) Saving to: ‘ergo_3.5-1.dsc’ 0K . 100% 90.7M=0s 2020-06-08 22:41:26 (90.7 MB/s) - ‘ergo_3.5-1.dsc’ saved [1914/1914] Mon Jun 8 22:41:26 UTC 2020 I: ergo_3.5-1.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA1 Format: 3.0 (quilt) Source: ergo Binary: ergo Architecture: any Version: 3.5-1 Maintainer: Debichem Team Uploaders: Michael Banck Homepage: http://ergoscf.org/ Standards-Version: 3.9.4 Vcs-Browser: http://anonscm.debian.org/viewvc/debichem/unstable/ergo/ Vcs-Svn: svn://anonscm.debian.org/debichem/unstable/ergo/ Build-Depends: autotools-dev (>> 20100122.1~), bc, debhelper (>= 7.0.50~), libatlas-base-dev, libblas-dev, liblapack-dev Package-List: ergo deb science optional arch=any Checksums-Sha1: 0c330a9ec9ae4734eb5fef49689393c85f9028d4 3384935 ergo_3.5.orig.tar.gz b877fa757db702d2789e6e13671e3383bbeb714f 3196 ergo_3.5-1.debian.tar.xz Checksums-Sha256: a912633545d3450c1f4370bab552a6436777d77df53365f53911d56bc6a4bf51 3384935 ergo_3.5.orig.tar.gz a9e93a5d6b2bd9e6da2133972fc6d2573f4ce3b2dc0893f3e4e9f79c4f59610f 3196 ergo_3.5-1.debian.tar.xz Files: cc21afe1a5efe6198e2cfcca72805ec1 3384935 ergo_3.5.orig.tar.gz 8277ff606805deec1d8814001b5f1a10 3196 ergo_3.5-1.debian.tar.xz -----BEGIN PGP SIGNATURE----- Version: GnuPG v1 iQIcBAEBAgAGBQJX5YUbAAoJENxoaie0NIGwiUgP/2g0+EFpLAYFCVeJaOqyTkfH t5zO7bgmF/uS7IxkS8Z59iBoWKW5n4Ni/sSnuzLS39OCKe3vNXbhoBvYRZ/VPlLi yMkWZqtbSRFGiajurEDjycv/W5W/2kFsXxjmrpxL4bxVnruR+zjfATOBVbp9mhjd BGqJSav86++cPT/drINQmAI5PCDhKDJqPn6761QaRTGfT+9WXzr3tCWjFsAXQong M0l/WEMg+C96s5OkhYWTtuEqM8Dij06q5eQUmlWUkfHq8HjvQX7e21sHPV68AqCo yUZX4eospqcRfmvifRTUJn9kfg8YEK+wvRXDZ46LWZl8s0ULskS48Y5WKn2HvpWN pq9f/a6u0Mpo4NZgOS1IioIl2wf2fLyM85eszOgzg62EsM7Q6QrTdXWUnSylNz/X tdM39qqW6gSfq3n0/9+qelnYt2H29Vc5YENXQjsQm+nvHhwj9wG30vhbbxgtLiBu OWFzw8dovzzOF8HH8F/YFp564tJDYn9uQCUzHKmPnFDupJZzJzV33npKG1hr5m76 2r5GSe+fhgrqUwRb/oB65sW4eT96Ra89NJTPo9a91/xLU+KTIZM3a2CKx0SHra/D Ru+403oZYUK6WrM3zE96oBwCzomEzE7yNXgFph4jm/rXhInAX3L7GHYiZoqtjE87 dGDS4X0jsAMgEc/dtbzJ =pela -----END PGP SIGNATURE----- Mon Jun 8 22:41:26 UTC 2020 I: Checking whether the package is not for us Mon Jun 8 22:41:26 UTC 2020 I: Starting 1st build on remote node jtx1b-armhf-rb.debian.net. Mon Jun 8 22:41:26 UTC 2020 I: Preparing to do remote build '1' on jtx1b-armhf-rb.debian.net. Tue Jun 9 00:20:36 UTC 2020 I: Deleting $TMPDIR on jtx1b-armhf-rb.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Mon Jun 8 10:41:47 -12 2020 I: pbuilder-time-stamp: 1591656107 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/buster-reproducible-base.tgz] I: copying local configuration I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [ergo_3.5-1.dsc] I: copying [./ergo_3.5.orig.tar.gz] I: copying [./ergo_3.5-1.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/root/.gnupg/trustedkeys.kbx': General error gpgv: Signature made Fri Sep 23 07:40:11 2016 -12 gpgv: using RSA key DC686A27B43481B0 gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./ergo_3.5-1.dsc dpkg-source: info: extracting ergo in ergo-3.5 dpkg-source: info: unpacking ergo_3.5.orig.tar.gz dpkg-source: info: unpacking ergo_3.5-1.debian.tar.xz I: using fakeroot in build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/30873/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='armhf' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=3' DISTRIBUTION='' HOME='/root' HOST_ARCH='armhf' IFS=' ' INVOCATION_ID='9b03c7b665f340a18bf150965c952a9b' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='30873' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.zYGVb3PbTL/pbuilderrc_sPs1 --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/buster-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.zYGVb3PbTL/b1 --logfile b1/build.log ergo_3.5-1.dsc' SUDO_GID='114' SUDO_UID='110' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://10.0.0.15:8000/' I: uname -a Linux jtx1b 4.19.0-9-arm64 #1 SMP Debian 4.19.118-2 (2020-04-29) aarch64 GNU/Linux I: ls -l /bin total 3328 -rwxr-xr-x 1 root root 767656 Apr 17 2019 bash -rwxr-xr-x 3 root root 26052 Jul 10 2019 bunzip2 -rwxr-xr-x 3 root root 26052 Jul 10 2019 bzcat lrwxrwxrwx 1 root root 6 Jul 10 2019 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2227 Jul 10 2019 bzdiff lrwxrwxrwx 1 root root 6 Jul 10 2019 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4877 Jun 24 2019 bzexe lrwxrwxrwx 1 root root 6 Jul 10 2019 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3641 Jul 10 2019 bzgrep -rwxr-xr-x 3 root root 26052 Jul 10 2019 bzip2 -rwxr-xr-x 1 root root 9636 Jul 10 2019 bzip2recover lrwxrwxrwx 1 root root 6 Jul 10 2019 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Jul 10 2019 bzmore -rwxr-xr-x 1 root root 22432 Feb 28 2019 cat -rwxr-xr-x 1 root root 38868 Feb 28 2019 chgrp -rwxr-xr-x 1 root root 38836 Feb 28 2019 chmod -rwxr-xr-x 1 root root 42972 Feb 28 2019 chown -rwxr-xr-x 1 root root 88376 Feb 28 2019 cp -rwxr-xr-x 1 root root 75516 Jan 17 2019 dash -rwxr-xr-x 1 root root 71648 Feb 28 2019 date -rwxr-xr-x 1 root root 51212 Feb 28 2019 dd -rwxr-xr-x 1 root root 55672 Feb 28 2019 df -rwxr-xr-x 1 root root 88444 Feb 28 2019 dir -rwxr-xr-x 1 root root 54872 Jan 9 2019 dmesg lrwxrwxrwx 1 root root 8 Sep 26 2018 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Sep 26 2018 domainname -> hostname -rwxr-xr-x 1 root root 22364 Feb 28 2019 echo -rwxr-xr-x 1 root root 28 Jan 7 2019 egrep -rwxr-xr-x 1 root root 18260 Feb 28 2019 false -rwxr-xr-x 1 root root 28 Jan 7 2019 fgrep -rwxr-xr-x 1 root root 47356 Jan 9 2019 findmnt -rwsr-xr-x 1 root root 21980 Apr 22 07:38 fusermount -rwxr-xr-x 1 root root 124508 Jan 7 2019 grep -rwxr-xr-x 2 root root 2345 Jan 5 2019 gunzip -rwxr-xr-x 1 root root 6375 Jan 5 2019 gzexe -rwxr-xr-x 1 root root 64232 Jan 5 2019 gzip -rwxr-xr-x 1 root root 13784 Sep 26 2018 hostname -rwxr-xr-x 1 root root 43044 Feb 28 2019 ln -rwxr-xr-x 1 root root 34932 Jul 26 2018 login -rwxr-xr-x 1 root root 88444 Feb 28 2019 ls -rwxr-xr-x 1 root root 67036 Jan 9 2019 lsblk -rwxr-xr-x 1 root root 47168 Feb 28 2019 mkdir -rwxr-xr-x 1 root root 43040 Feb 28 2019 mknod -rwxr-xr-x 1 root root 26552 Feb 28 2019 mktemp -rwxr-xr-x 1 root root 26024 Jan 9 2019 more -rwsr-xr-x 1 root root 34268 Jan 9 2019 mount -rwxr-xr-x 1 root root 9688 Jan 9 2019 mountpoint -rwxr-xr-x 1 root root 84284 Feb 28 2019 mv lrwxrwxrwx 1 root root 8 Sep 26 2018 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Feb 14 2019 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 22416 Feb 28 2019 pwd lrwxrwxrwx 1 root root 4 Apr 17 2019 rbash -> bash -rwxr-xr-x 1 root root 26504 Feb 28 2019 readlink -rwxr-xr-x 1 root root 42968 Feb 28 2019 rm -rwxr-xr-x 1 root root 26496 Feb 28 2019 rmdir -rwxr-xr-x 1 root root 14136 Jan 21 2019 run-parts -rwxr-xr-x 1 root root 76012 Dec 22 2018 sed lrwxrwxrwx 1 root root 4 Jun 6 20:26 sh -> dash -rwxr-xr-x 1 root root 22384 Feb 28 2019 sleep -rwxr-xr-x 1 root root 51124 Feb 28 2019 stty -rwsr-xr-x 1 root root 42472 Jan 9 2019 su -rwxr-xr-x 1 root root 22392 Feb 28 2019 sync -rwxr-xr-x 1 root root 283324 Apr 23 2019 tar -rwxr-xr-x 1 root root 9808 Jan 21 2019 tempfile -rwxr-xr-x 1 root root 63464 Feb 28 2019 touch -rwxr-xr-x 1 root root 18260 Feb 28 2019 true -rwxr-xr-x 1 root root 9636 Apr 22 07:38 ulockmgr_server -rwsr-xr-x 1 root root 21976 Jan 9 2019 umount -rwxr-xr-x 1 root root 22380 Feb 28 2019 uname -rwxr-xr-x 2 root root 2345 Jan 5 2019 uncompress -rwxr-xr-x 1 root root 88444 Feb 28 2019 vdir -rwxr-xr-x 1 root root 21980 Jan 9 2019 wdctl -rwxr-xr-x 1 root root 946 Jan 21 2019 which lrwxrwxrwx 1 root root 8 Sep 26 2018 ypdomainname -> hostname -rwxr-xr-x 1 root root 1983 Jan 5 2019 zcat -rwxr-xr-x 1 root root 1677 Jan 5 2019 zcmp -rwxr-xr-x 1 root root 5879 Jan 5 2019 zdiff -rwxr-xr-x 1 root root 29 Jan 5 2019 zegrep -rwxr-xr-x 1 root root 29 Jan 5 2019 zfgrep -rwxr-xr-x 1 root root 2080 Jan 5 2019 zforce -rwxr-xr-x 1 root root 7584 Jan 5 2019 zgrep -rwxr-xr-x 1 root root 2205 Jan 5 2019 zless -rwxr-xr-x 1 root root 1841 Jan 5 2019 zmore -rwxr-xr-x 1 root root 4552 Jan 5 2019 znew I: user script /srv/workspace/pbuilder/30873/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: armhf Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: autotools-dev (>> 20100122.1~), bc, debhelper (>= 7.0.50~), libatlas-base-dev, libblas-dev, liblapack-dev dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 18932 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on autotools-dev (>> 20100122.1~); however: Package autotools-dev is not installed. pbuilder-satisfydepends-dummy depends on bc; however: Package bc is not installed. pbuilder-satisfydepends-dummy depends on debhelper (>= 7.0.50~); however: Package debhelper is not installed. pbuilder-satisfydepends-dummy depends on libatlas-base-dev; however: Package libatlas-base-dev is not installed. pbuilder-satisfydepends-dummy depends on libblas-dev; however: Package libblas-dev is not installed. pbuilder-satisfydepends-dummy depends on liblapack-dev; however: Package liblapack-dev is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bc{a} bsdmainutils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libatlas-base-dev{a} libatlas3-base{a} libblas-dev{a} libblas3{a} libbsd0{a} libcroco3{a} libelf1{a} libfile-stripnondeterminism-perl{a} libgfortran5{a} libglib2.0-0{a} libicu63{a} liblapack-dev{a} liblapack3{a} libmagic-mgc{a} libmagic1{a} libncurses6{a} libpipeline1{a} libreadline7{a} libsigsegv2{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} po-debconf{a} readline-common{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libglib2.0-data libgpm2 libltdl-dev libmail-sendmail-perl lynx shared-mime-info wget xdg-user-dirs 0 packages upgraded, 43 newly installed, 0 to remove and 0 not upgraded. Need to get 27.5 MB of archives. After unpacking 102 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian buster/main armhf libbsd0 armhf 0.9.1-2 [103 kB] Get: 2 http://deb.debian.org/debian buster/main armhf bsdmainutils armhf 11.1.2+b1 [186 kB] Get: 3 http://deb.debian.org/debian buster/main armhf libuchardet0 armhf 0.0.6-3 [62.2 kB] Get: 4 http://deb.debian.org/debian buster/main armhf groff-base armhf 1.22.4-3 [828 kB] Get: 5 http://deb.debian.org/debian buster/main armhf libpipeline1 armhf 1.5.1-2 [26.8 kB] Get: 6 http://deb.debian.org/debian buster/main armhf man-db armhf 2.8.5-2 [1240 kB] Get: 7 http://deb.debian.org/debian buster/main armhf readline-common all 7.0-5 [70.6 kB] Get: 8 http://deb.debian.org/debian buster/main armhf sensible-utils all 0.0.12 [15.8 kB] Get: 9 http://deb.debian.org/debian buster/main armhf libmagic-mgc armhf 1:5.35-4+deb10u1 [242 kB] Get: 10 http://deb.debian.org/debian buster/main armhf libmagic1 armhf 1:5.35-4+deb10u1 [110 kB] Get: 11 http://deb.debian.org/debian buster/main armhf file armhf 1:5.35-4+deb10u1 [65.5 kB] Get: 12 http://deb.debian.org/debian buster/main armhf gettext-base armhf 0.19.8.1-9 [118 kB] Get: 13 http://deb.debian.org/debian buster/main armhf libsigsegv2 armhf 2.12-2 [32.1 kB] Get: 14 http://deb.debian.org/debian buster/main armhf m4 armhf 1.4.18-2 [190 kB] Get: 15 http://deb.debian.org/debian buster/main armhf autoconf all 2.69-11 [341 kB] Get: 16 http://deb.debian.org/debian buster/main armhf autotools-dev all 20180224.1 [77.0 kB] Get: 17 http://deb.debian.org/debian buster/main armhf automake all 1:1.16.1-4 [771 kB] Get: 18 http://deb.debian.org/debian buster/main armhf autopoint all 0.19.8.1-9 [434 kB] Get: 19 http://deb.debian.org/debian buster/main armhf libncurses6 armhf 6.1+20181013-2+deb10u2 [79.8 kB] Get: 20 http://deb.debian.org/debian buster/main armhf libreadline7 armhf 7.0-5 [131 kB] Get: 21 http://deb.debian.org/debian buster/main armhf bc armhf 1.07.1-2+b1 [104 kB] Get: 22 http://deb.debian.org/debian buster/main armhf libtool all 2.4.6-9 [547 kB] Get: 23 http://deb.debian.org/debian buster/main armhf dh-autoreconf all 19 [16.9 kB] Get: 24 http://deb.debian.org/debian buster/main armhf libarchive-zip-perl all 1.64-1 [96.8 kB] Get: 25 http://deb.debian.org/debian buster/main armhf libfile-stripnondeterminism-perl all 1.1.2-1 [19.8 kB] Get: 26 http://deb.debian.org/debian buster/main armhf dh-strip-nondeterminism all 1.1.2-1 [13.0 kB] Get: 27 http://deb.debian.org/debian buster/main armhf libelf1 armhf 0.176-1.1 [158 kB] Get: 28 http://deb.debian.org/debian buster/main armhf dwz armhf 0.12-3 [72.0 kB] Get: 29 http://deb.debian.org/debian buster/main armhf libglib2.0-0 armhf 2.58.3-2+deb10u2 [1101 kB] Get: 30 http://deb.debian.org/debian buster/main armhf libicu63 armhf 63.1-6+deb10u1 [8005 kB] Get: 31 http://deb.debian.org/debian buster/main armhf libxml2 armhf 2.9.4+dfsg1-7+b3 [595 kB] Get: 32 http://deb.debian.org/debian buster/main armhf libcroco3 armhf 0.6.12-3 [133 kB] Get: 33 http://deb.debian.org/debian buster/main armhf gettext armhf 0.19.8.1-9 [1242 kB] Get: 34 http://deb.debian.org/debian buster/main armhf intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get: 35 http://deb.debian.org/debian buster/main armhf po-debconf all 1.0.21 [248 kB] Get: 36 http://deb.debian.org/debian buster/main armhf debhelper all 12.1.1 [1016 kB] Get: 37 http://deb.debian.org/debian buster/main armhf libgfortran5 armhf 8.3.0-6 [213 kB] Get: 38 http://deb.debian.org/debian buster/main armhf libatlas3-base armhf 3.10.3-8 [2343 kB] Get: 39 http://deb.debian.org/debian buster/main armhf libatlas-base-dev armhf 3.10.3-8 [2920 kB] Get: 40 http://deb.debian.org/debian buster/main armhf libblas3 armhf 3.8.0-2 [109 kB] Get: 41 http://deb.debian.org/debian buster/main armhf libblas-dev armhf 3.8.0-2 [117 kB] Get: 42 http://deb.debian.org/debian buster/main armhf liblapack3 armhf 3.8.0-2 [1631 kB] Get: 43 http://deb.debian.org/debian buster/main armhf liblapack-dev armhf 3.8.0-2 [1680 kB] Fetched 27.5 MB in 3s (8156 kB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libbsd0:armhf. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 18932 files and directories currently installed.) Preparing to unpack .../00-libbsd0_0.9.1-2_armhf.deb ... Unpacking libbsd0:armhf (0.9.1-2) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../01-bsdmainutils_11.1.2+b1_armhf.deb ... Unpacking bsdmainutils (11.1.2+b1) ... Selecting previously unselected package libuchardet0:armhf. Preparing to unpack .../02-libuchardet0_0.0.6-3_armhf.deb ... Unpacking libuchardet0:armhf (0.0.6-3) ... Selecting previously unselected package groff-base. Preparing to unpack .../03-groff-base_1.22.4-3_armhf.deb ... Unpacking groff-base (1.22.4-3) ... Selecting previously unselected package libpipeline1:armhf. Preparing to unpack .../04-libpipeline1_1.5.1-2_armhf.deb ... Unpacking libpipeline1:armhf (1.5.1-2) ... Selecting previously unselected package man-db. Preparing to unpack .../05-man-db_2.8.5-2_armhf.deb ... Unpacking man-db (2.8.5-2) ... Selecting previously unselected package readline-common. Preparing to unpack .../06-readline-common_7.0-5_all.deb ... Unpacking readline-common (7.0-5) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../07-sensible-utils_0.0.12_all.deb ... Unpacking sensible-utils (0.0.12) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../08-libmagic-mgc_1%3a5.35-4+deb10u1_armhf.deb ... Unpacking libmagic-mgc (1:5.35-4+deb10u1) ... Selecting previously unselected package libmagic1:armhf. Preparing to unpack .../09-libmagic1_1%3a5.35-4+deb10u1_armhf.deb ... Unpacking libmagic1:armhf (1:5.35-4+deb10u1) ... Selecting previously unselected package file. Preparing to unpack .../10-file_1%3a5.35-4+deb10u1_armhf.deb ... Unpacking file (1:5.35-4+deb10u1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../11-gettext-base_0.19.8.1-9_armhf.deb ... Unpacking gettext-base (0.19.8.1-9) ... Selecting previously unselected package libsigsegv2:armhf. Preparing to unpack .../12-libsigsegv2_2.12-2_armhf.deb ... Unpacking libsigsegv2:armhf (2.12-2) ... Selecting previously unselected package m4. Preparing to unpack .../13-m4_1.4.18-2_armhf.deb ... Unpacking m4 (1.4.18-2) ... Selecting previously unselected package autoconf. Preparing to unpack .../14-autoconf_2.69-11_all.deb ... Unpacking autoconf (2.69-11) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../15-autotools-dev_20180224.1_all.deb ... Unpacking autotools-dev (20180224.1) ... Selecting previously unselected package automake. Preparing to unpack .../16-automake_1%3a1.16.1-4_all.deb ... Unpacking automake (1:1.16.1-4) ... Selecting previously unselected package autopoint. Preparing to unpack .../17-autopoint_0.19.8.1-9_all.deb ... Unpacking autopoint (0.19.8.1-9) ... Selecting previously unselected package libncurses6:armhf. Preparing to unpack .../18-libncurses6_6.1+20181013-2+deb10u2_armhf.deb ... Unpacking libncurses6:armhf (6.1+20181013-2+deb10u2) ... Selecting previously unselected package libreadline7:armhf. Preparing to unpack .../19-libreadline7_7.0-5_armhf.deb ... Unpacking libreadline7:armhf (7.0-5) ... Selecting previously unselected package bc. Preparing to unpack .../20-bc_1.07.1-2+b1_armhf.deb ... Unpacking bc (1.07.1-2+b1) ... Selecting previously unselected package libtool. Preparing to unpack .../21-libtool_2.4.6-9_all.deb ... 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Setting up libncurses6:armhf (6.1+20181013-2+deb10u2) ... Setting up libsigsegv2:armhf (2.12-2) ... Setting up autopoint (0.19.8.1-9) ... Setting up libgfortran5:armhf (8.3.0-6) ... Setting up sensible-utils (0.0.12) ... Setting up libuchardet0:armhf (0.0.6-3) ... Setting up libbsd0:armhf (0.9.1-2) ... Setting up libelf1:armhf (0.176-1.1) ... Setting up readline-common (7.0-5) ... Setting up libxml2:armhf (2.9.4+dfsg1-7+b3) ... Setting up libreadline7:armhf (7.0-5) ... Setting up libfile-stripnondeterminism-perl (1.1.2-1) ... Setting up libatlas3-base:armhf (3.10.3-8) ... update-alternatives: using /usr/lib/arm-linux-gnueabihf/atlas/libblas.so.3 to provide /usr/lib/arm-linux-gnueabihf/libblas.so.3 (libblas.so.3-arm-linux-gnueabihf) in auto mode update-alternatives: using /usr/lib/arm-linux-gnueabihf/atlas/liblapack.so.3 to provide /usr/lib/arm-linux-gnueabihf/liblapack.so.3 (liblapack.so.3-arm-linux-gnueabihf) in auto mode Setting up libtool (2.4.6-9) ... Setting up bc (1.07.1-2+b1) ... Setting up m4 (1.4.18-2) ... Setting up libatlas-base-dev:armhf (3.10.3-8) ... update-alternatives: using /usr/lib/arm-linux-gnueabihf/atlas/libblas.so to provide /usr/lib/arm-linux-gnueabihf/libblas.so (libblas.so-arm-linux-gnueabihf) in auto mode update-alternatives: using /usr/lib/arm-linux-gnueabihf/atlas/liblapack.so to provide /usr/lib/arm-linux-gnueabihf/liblapack.so (liblapack.so-arm-linux-gnueabihf) in auto mode Setting up libblas3:armhf (3.8.0-2) ... Setting up bsdmainutils (11.1.2+b1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libcroco3:armhf (0.6.12-3) ... Setting up autoconf (2.69-11) ... Setting up dwz (0.12-3) ... Setting up groff-base (1.22.4-3) ... Setting up libblas-dev:armhf (3.8.0-2) ... Setting up automake (1:1.16.1-4) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up liblapack3:armhf (3.8.0-2) ... Setting up gettext (0.19.8.1-9) ... Setting up man-db (2.8.5-2) ... Not building database; man-db/auto-update is not 'true'. Setting up intltool-debian (0.35.0+20060710.5) ... Setting up liblapack-dev:armhf (3.8.0-2) ... Setting up po-debconf (1.0.21) ... Setting up debhelper (12.1.1) ... Setting up dh-autoreconf (19) ... Setting up dh-strip-nondeterminism (1.1.2-1) ... Processing triggers for libc-bin (2.28-10) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps Reading package lists... Building dependency tree... Reading state information... fakeroot is already the newest version (1.23-1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package I: Running cd /build/ergo-3.5/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b dpkg-buildpackage: info: source package ergo dpkg-buildpackage: info: source version 3.5-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Michael Banck dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf fakeroot debian/rules clean dh clean --with autotools_dev dh: Compatibility levels before 9 are deprecated (level 7 in use) dh: The autotools-dev sequence is deprecated and replaced by dh in debhelper (>= 9.20160115) dh: This feature will be removed in compat 12. debian/rules override_dh_auto_clean make[1]: Entering directory '/build/ergo-3.5' dh_auto_clean dh_auto_clean: Compatibility levels before 9 are deprecated (level 7 in use) rm -f test/*.bin test/ergoscf.out* make[1]: Leaving directory '/build/ergo-3.5' dh_autotools-dev_restoreconfig dh_autotools-dev_restoreconfig: Compatibility levels before 9 are deprecated (level 7 in use) dh_autotools-dev_restoreconfig: dh_autotools-dev_restoreconfig is deprecated; please see dh_autotools-dev_restoreconfig(1) for a replacement dh_autotools-dev_restoreconfig: This feature will be removed in compat 12. dh_clean dh_clean: Compatibility levels before 9 are deprecated (level 7 in use) debian/rules build dh build --with autotools_dev dh: Compatibility levels before 9 are deprecated (level 7 in use) dh: The autotools-dev sequence is deprecated and replaced by dh in debhelper (>= 9.20160115) dh: This feature will be removed in compat 12. dh_update_autotools_config dh_autotools-dev_updateconfig dh_autotools-dev_updateconfig: Compatibility levels before 9 are deprecated (level 7 in use) dh_autotools-dev_updateconfig: dh_autotools-dev_updateconfig is deprecated; please see dh_autotools-dev_updateconfig(1) for a replacement dh_autotools-dev_updateconfig: This feature will be removed in compat 12. dh_auto_configure dh_auto_configure: Compatibility levels before 9 are deprecated (level 7 in use) ./configure --build=arm-linux-gnueabihf --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-silent-rules --libexecdir=\${prefix}/lib/ergo --disable-maintainer-mode --disable-dependency-tracking configure: WARNING: unrecognized options: --disable-maintainer-mode checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether make supports nested variables... (cached) yes checking which precision to use... DOUBLE checking whether to use internal linear algebra template library... no checking whether to use SSE intrinsics to generate efficient computational kernels... no checking for icc... no checking for pgcc... no checking for cc... cc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether cc accepts -g... yes checking for cc option to accept ISO C89... none needed checking whether cc understands -c and -o together... yes checking for style of include used by make... GNU checking dependency style of cc... none checking for icpc... no checking for pgcpp... no checking for c++... c++ checking whether we are using the GNU C++ compiler... yes checking whether c++ accepts -g... yes checking dependency style of c++... none checking for ranlib... ranlib checking for flex... no checking for lex... no checking for bison... no checking for byacc... no checking how to run the C preprocessor... cc -E checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking limits.h usability... yes checking limits.h presence... yes checking for limits.h... yes checking for memory.h... (cached) yes checking stddef.h usability... yes checking stddef.h presence... yes checking for stddef.h... yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for strings.h... (cached) yes checking sys/time.h usability... yes checking sys/time.h presence... yes checking for sys/time.h... yes checking for unistd.h... (cached) yes checking for C/C++ restrict keyword... __restrict checking for working volatile... yes checking for size_t... yes checking for stdlib.h... (cached) yes checking for GNU libc compatible malloc... yes checking for stdlib.h... (cached) yes checking for GNU libc compatible realloc... yes checking for vprintf... yes checking for _doprnt... no checking for atexit... yes checking for floor... no checking for memset... yes checking for rint... no checking for strcasecmp... yes checking for strchr... yes checking for strdup... yes checking for strncasecmp... yes checking for exp in -lm... yes checking for pow... yes checking for powf... yes checking for powl... yes checking for sqrt... yes checking for sqrtf... yes checking for sqrtl... yes checking for fabs... yes checking for fabsf... yes checking for fabsl... yes checking for exp... yes checking for expf... yes checking for expl... yes checking for log... yes checking for logf... yes checking for logl... yes checking for erf... yes checking for erff... yes checking for erfl... yes checking for erfc... yes checking for erfcf... yes checking for erfcl... yes checking for pthread_create in -lpthread... yes checking for dposv_... no checking for main in -lacml... no checking for main in -lmkl... no checking for main in -lessl... no checking for main in -latlas... yes checking for dswap_ in -lf77blas... yes checking for main in -lmkl_lapack... no checking for dposv_ in -llapack... yes checking for 10.0 icpc bug... ok checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating source/Makefile config.status: creating source/basisset/Makefile config.status: creating source/ci/Makefile config.status: creating source/dft/Makefile config.status: creating source/electron_dynamics/Makefile config.status: creating source/integrals/Makefile config.status: creating source/matrix/Makefile config.status: creating source/matrix/template_lapack/Makefile config.status: creating source/matrix/template_lapack/blas/Makefile config.status: creating source/matrix/template_lapack/lapack/Makefile config.status: creating source/densfromf/Makefile config.status: creating source/densfromf/recursive_expansion/Makefile config.status: creating source/densfromf/recursive_expansion/src/Makefile config.status: creating source/matrix_wrapper/Makefile config.status: creating source/matrix_wrapper/ErgoMatrix/Makefile config.status: creating source/matrix_wrapper/ErgoMatrix/src/Makefile config.status: creating source/matrix_wrapper/ErgoMatrix/test/Makefile config.status: creating source/matrix_wrapper/file_tools/Makefile config.status: creating source/matrix_wrapper/file_tools/src/Makefile config.status: creating source/matrix_wrapper/file_tools/test/Makefile config.status: creating source/scf/Makefile config.status: creating source/tddft/Makefile config.status: creating source/test/Makefile config.status: creating source/utilities/Makefile config.status: creating source/utilities_basic/Makefile config.status: creating basis/Makefile config.status: creating documentation/source/Makefile config.status: creating params/Makefile config.status: creating mol/Makefile config.status: creating test/Makefile config.status: creating source/config.h config.status: executing depfiles commands configure: WARNING: unrecognized options: --disable-maintainer-mode Selected precision : DOUBLE Critical warnings : no Linear Algebra Lib : ATLAS dh_auto_build dh_auto_build: Compatibility levels before 9 are deprecated (level 7 in use) make -j1 make[1]: Entering directory '/build/ergo-3.5' Making all in source make[2]: Entering directory '/build/ergo-3.5/source' make all-recursive make[3]: Entering directory '/build/ergo-3.5/source' Making all in basisset make[4]: Entering directory '/build/ergo-3.5/source/basisset' c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/utilities -I../../source/utilities_basic -I../../source/integrals -I../../source/matrix -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o basisinfo.o basisinfo.cc c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/utilities -I../../source/utilities_basic -I../../source/integrals -I../../source/matrix -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o basisset.o basisset.cc rm -f libbasisset.a ar cru libbasisset.a basisinfo.o basisset.o ar: `u' modifier ignored since `D' is the default (see `U') ranlib libbasisset.a make[4]: Leaving directory '/build/ergo-3.5/source/basisset' Making all in ci make[4]: Entering directory '/build/ergo-3.5/source/ci' c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/basisset -I../../source/densfromf -I../../source/utilities -I../../source/utilities_basic -I../../source/integrals -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o ci.o ci.cc In file included from ../../source/matrix/Matrix.h:69, from ../../source/matrix_typedefs.h:41, from ../../source/utilities/dipole_moment.h:29, from ci.cc:48: ../../source/matrix/sort.h:37:5: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(std::exception){ ^~~~~ rm -f libci.a ar cru libci.a ci.o ar: `u' modifier ignored since `D' is the default (see `U') ranlib libci.a make[4]: Leaving directory '/build/ergo-3.5/source/ci' Making all in utilities make[4]: Entering directory '/build/ergo-3.5/source/utilities' c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/densfromf -I../../source/basisset -I../../source/integrals -I../../source/utilities_basic -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o integral_matrix_wrappers.o integral_matrix_wrappers.cc In file included from ../../source/matrix/Matrix.h:69, from ../../source/matrix_typedefs.h:41, from integral_matrix_wrappers.h:33, from integral_matrix_wrappers.cc:31: ../../source/matrix/sort.h:37:5: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(std::exception){ ^~~~~ In file included from /usr/include/c++/8/vector:69, from ../../source/utilities_basic/molecule.h:33, from ../../source/basisset/basisinfo.h:38, from integral_matrix_wrappers.h:32, from integral_matrix_wrappers.cc:31: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:64, from ../../source/utilities_basic/molecule.h:33, from ../../source/basisset/basisinfo.h:38, from integral_matrix_wrappers.h:32, from integral_matrix_wrappers.cc:31: /usr/include/c++/8/bits/stl_vector.h: In member function 'void mat::Matrix::getValues(const std::vector&, const std::vector&, std::vector&) const [with Treal = double; Telement = mat::Matrix > > >]': /usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_fill_insert(end(), __new_size - size(), __x); ^~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from ../../source/utilities_basic/molecule.h:33, from ../../source/basisset/basisinfo.h:38, from integral_matrix_wrappers.h:32, from integral_matrix_wrappers.cc:31: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from ../../source/utilities_basic/molecule.h:33, from ../../source/basisset/basisinfo.h:38, from integral_matrix_wrappers.h:32, from integral_matrix_wrappers.cc:31: /usr/include/c++/8/bits/stl_vector.h: In member function 'void mat::Matrix::getAllValues(std::vector&, std::vector&, std::vector&) const [with Treal = double]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In function 'int compute_K_by_boxes_sparse(const BasisInfoStruct&, const IntegralInfo&, const JK::ExchWeights&, const JK::Params&, symmMatrix&, symmMatrix&, const std::vector&, const std::vector&)': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/densfromf -I../../source/basisset -I../../source/integrals -I../../source/utilities_basic -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o matrix_utilities.o matrix_utilities.cc In file included from ../../source/matrix/Matrix.h:69, from ../../source/matrix_typedefs.h:41, from matrix_utilities.h:32, from matrix_utilities.cc:34: ../../source/matrix/sort.h:37:5: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(std::exception){ ^~~~~ matrix_utilities.cc:76:30: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] TIndexIterator last) throw(std::exception) { ^~~~~ In file included from /usr/include/c++/8/vector:69, from matrix_utilities.cc:32: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from matrix_utilities.cc:32: /usr/include/c++/8/bits/stl_vector.h: In member function 'void mat::Matrix::getAllValues(std::vector&, std::vector&, std::vector&) const [with Treal = double]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In function 'bool check_if_matrix_contains_strange_elements(const symmMatrix&, const std::vector&)': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/densfromf -I../../source/basisset -I../../source/integrals -I../../source/utilities_basic -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o matrix_utilities_gao.o matrix_utilities_gao.cc In file included from ../../source/matrix/Matrix.h:69, from ../../source/matrix_typedefs.h:41, from matrix_utilities.h:32, from matrix_utilities_gao.cc:32: ../../source/matrix/sort.h:37:5: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(std::exception){ ^~~~~ c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/densfromf -I../../source/basisset -I../../source/integrals -I../../source/utilities_basic -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o simple_lanczos.o simple_lanczos.cc c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/densfromf -I../../source/basisset -I../../source/integrals -I../../source/utilities_basic -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o density_description_file.o density_description_file.cc c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/densfromf -I../../source/basisset -I../../source/integrals -I../../source/utilities_basic -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o density_projection.o density_projection.cc In file included from ../../source/matrix/Matrix.h:69, from ../../source/matrix_typedefs.h:41, from density_projection.h:33, from density_projection.cc:38: ../../source/matrix/sort.h:37:5: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(std::exception){ ^~~~~ In file included from /usr/include/c++/8/algorithm:62, from ../../source/matrix/Matrix.h:64, from ../../source/matrix_typedefs.h:41, from density_projection.h:33, from density_projection.cc:38: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1880:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __final_insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1880:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from ../../source/matrix/Matrix.h:64, from ../../source/matrix_typedefs.h:41, from density_projection.h:33, from density_projection.cc:38: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = double; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from ../../source/matrix/Matrix.h:64, from ../../source/matrix_typedefs.h:41, from density_projection.h:33, from density_projection.cc:38: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'Treal mat::EuclTruncationBase::run(Treal) [with Tmatrix = mat::MatrixGeneral > > > > >; Treal = double]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1971:31: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__final_insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'Treal mat::EuclTruncationBase::run(Treal) [with Tmatrix = mat::MatrixSymmetric > > > > >; Treal = double]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1971:31: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__final_insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/densfromf -I../../source/basisset -I../../source/integrals -I../../source/utilities_basic -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o densitymanager.o densitymanager.cc c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/densfromf -I../../source/basisset -I../../source/integrals -I../../source/utilities_basic -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o dipole_moment.o dipole_moment.cc In file included from ../../source/matrix/Matrix.h:69, from ../../source/matrix_typedefs.h:41, from dipole_moment.h:29, from dipole_moment.cc:29: ../../source/matrix/sort.h:37:5: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(std::exception){ ^~~~~ rm -f libutilities.a ar cru libutilities.a integral_matrix_wrappers.o matrix_utilities.o matrix_utilities_gao.o simple_lanczos.o density_description_file.o density_projection.o densitymanager.o dipole_moment.o ar: `u' modifier ignored since `D' is the default (see `U') ranlib libutilities.a make[4]: Leaving directory '/build/ergo-3.5/source/utilities' Making all in utilities_basic make[4]: Entering directory '/build/ergo-3.5/source/utilities_basic' c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o atom_labels.o atom_labels.cc cc -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o barrier.o barrier.c c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o csr_matrix.o csr_matrix.cc c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o ergo_math.o ergo_math.cc c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o machine_epsilon.o machine_epsilon.cc c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o matrix_algebra.o matrix_algebra.cc c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o memorymanag.o memorymanag.cc c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o molecule.o molecule.cc c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o output.o output.cc c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o solve_lin_eq_syst.o solve_lin_eq_syst.cc c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o utilities.o utilities.cc utilities.cc: In function 'int get_memory_usage_by_ps(double*, double*)': utilities.cc:144:22: warning: '%s' directive writing up to 887 bytes into a region of size between 843 and 853 [-Wformat-overflow=] sprintf(cmdString, "ps -p %i -o vsize,rss | tail -n 1 > %s", pid, fileName); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~ In file included from /usr/include/stdio.h:873, from utilities.cc:32: /usr/include/arm-linux-gnueabihf/bits/stdio2.h:36:34: note: '__builtin___sprintf_chk' output between 36 and 933 bytes into a destination of size 888 return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __bos (__s), __fmt, __va_arg_pack ()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ utilities.cc:174:22: warning: '%s' directive writing up to 887 bytes into a region of size 885 [-Wformat-overflow=] sprintf(cmdString, "rm %s", fileName); ^~~~~~~ ~~~~~~~~ In file included from /usr/include/stdio.h:873, from utilities.cc:32: /usr/include/arm-linux-gnueabihf/bits/stdio2.h:36:34: note: '__builtin___sprintf_chk' output between 4 and 891 bytes into a destination of size 888 return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __bos (__s), __fmt, __va_arg_pack ()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o xyz_file_parser.o xyz_file_parser.cc rm -f libutilities_basic.a ar cru libutilities_basic.a atom_labels.o barrier.o csr_matrix.o ergo_math.o machine_epsilon.o matrix_algebra.o memorymanag.o molecule.o output.o solve_lin_eq_syst.o utilities.o xyz_file_parser.o ar: `u' modifier ignored since `D' is the default (see `U') ranlib libutilities_basic.a make[4]: Leaving directory '/build/ergo-3.5/source/utilities_basic' Making all in matrix make[4]: Entering directory '/build/ergo-3.5/source/matrix' Making all in template_lapack make[5]: Entering directory '/build/ergo-3.5/source/matrix/template_lapack' Making all in blas make[6]: Entering directory '/build/ergo-3.5/source/matrix/template_lapack/blas' c++ -DHAVE_CONFIG_H -I. -I../../../../source -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o template_blas_basicmath.o template_blas_basicmath.cc c++ -DHAVE_CONFIG_H -I. -I../../../../source -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o template_blas_common.o template_blas_common.cc c++ -DHAVE_CONFIG_H -I. -I../../../../source -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o template_blas_test.o template_blas_test.cc rm -f libtemplateblas.a ar cru libtemplateblas.a template_blas_basicmath.o template_blas_common.o template_blas_test.o ar: `u' modifier ignored since `D' is the default (see `U') ranlib libtemplateblas.a c++ -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -fopenmp -Wl,-z,relro -Wl,--as-needed -o templateblastest template_blas_test.o libtemplateblas.a -llapack -lpthread -lm -lf77blas -latlas c++ -DHAVE_CONFIG_H -I. -I../../../../source -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o template_blas_test_threaded.o template_blas_test_threaded.cc c++ -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -fopenmp -Wl,-z,relro -Wl,--as-needed -o templateblastest_threaded template_blas_test_threaded.o libtemplateblas.a -llapack -lpthread -lm -lf77blas -latlas make[6]: Leaving directory '/build/ergo-3.5/source/matrix/template_lapack/blas' Making all in lapack make[6]: Entering directory '/build/ergo-3.5/source/matrix/template_lapack/lapack' c++ -DHAVE_CONFIG_H -I. -I../../../../source -I../../../../source/matrix/template_lapack/blas -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o template_lapack_common.o template_lapack_common.cc c++ -DHAVE_CONFIG_H -I. -I../../../../source -I../../../../source/matrix/template_lapack/blas -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o template_lapack_test.o template_lapack_test.cc rm -f libtemplatelapack.a ar cru libtemplatelapack.a template_lapack_common.o template_lapack_test.o ar: `u' modifier ignored since `D' is the default (see `U') ranlib libtemplatelapack.a c++ -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -fopenmp -Wl,-z,relro -Wl,--as-needed -o templatelapacktest template_lapack_test.o libtemplatelapack.a ../../../../source/matrix/template_lapack/blas/libtemplateblas.a -llapack -lpthread -lm -lf77blas -latlas c++ -DHAVE_CONFIG_H -I. -I../../../../source -I../../../../source/matrix/template_lapack/blas -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o template_lapack_test_threaded.o template_lapack_test_threaded.cc c++ -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -fopenmp -Wl,-z,relro -Wl,--as-needed -o templatelapacktest_threaded template_lapack_test_threaded.o libtemplatelapack.a ../../../../source/matrix/template_lapack/blas/libtemplateblas.a -llapack -lpthread -lm -lf77blas -latlas make[6]: Leaving directory '/build/ergo-3.5/source/matrix/template_lapack/lapack' make[6]: Entering directory '/build/ergo-3.5/source/matrix/template_lapack' make[6]: Nothing to be done for 'all-am'. make[6]: Leaving directory '/build/ergo-3.5/source/matrix/template_lapack' make[5]: Leaving directory '/build/ergo-3.5/source/matrix/template_lapack' make[5]: Entering directory '/build/ergo-3.5/source/matrix' c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o SizesAndBlocks.o SizesAndBlocks.cc c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o mat_gblas.o mat_gblas.cc c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o FileWritable.o FileWritable.cc In file included from /usr/include/c++/8/map:60, from FileWritable.h:42, from FileWritable.cc:48: /usr/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, double>; _KeyOfValue = std::_Select1st, double> >; _Compare = std::less >; _Alloc = std::allocator, double> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, double>, std::_Select1st, double> >, std::less >, std::allocator, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, double> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from FileWritable.h:42, from FileWritable.cc:48: /usr/include/c++/8/bits/stl_map.h: In member function 'void mat::FileWritable::readFromFile()': /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, double>, std::_Select1st, double> >, std::less >, std::allocator, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, double> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h: In member function 'mat::FileWritable& mat::FileWritable::operator=(const mat::FileWritable&)': /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, double>, std::_Select1st, double> >, std::less >, std::allocator, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, double> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h: In copy constructor 'mat::FileWritable::FileWritable(const mat::FileWritable&)': /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, double>, std::_Select1st, double> >, std::less >, std::allocator, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, double> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h: In member function 'void mat::FileWritable::writeToFile()': /usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, double>, std::_Select1st, double> >, std::less >, std::allocator, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, double> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o matInclude.o matInclude.cc c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o AllocatorManager.o AllocatorManager.cc c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o allocate.o allocate.cc c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o Memory_buffer_thread.o Memory_buffer_thread.cc rm -f libmat.a ar cru libmat.a SizesAndBlocks.o mat_gblas.o FileWritable.o matInclude.o AllocatorManager.o allocate.o Memory_buffer_thread.o ar: `u' modifier ignored since `D' is the default (see `U') ranlib libmat.a c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o API_test.o API_test.cc In file included from Matrix.h:69, from API_test.cc:44: sort.h:37:5: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(std::exception){ ^~~~~ In file included from /usr/include/c++/8/vector:69, from matInclude.h:40, from SizesAndBlocks.h:31, from API_test.cc:43: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector >::iterator' {aka '__gnu_cxx::__normal_iterator > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector >::iterator' {aka '__gnu_cxx::__normal_iterator > >'} changed in GCC 7.1 In file included from /usr/include/c++/8/vector:64, from matInclude.h:40, from SizesAndBlocks.h:31, from API_test.cc:43: /usr/include/c++/8/bits/stl_vector.h: In member function 'void mat::Matrix::getValues(const std::vector&, const std::vector&, std::vector&) const [with Treal = double; Telement = mat::Matrix >]': /usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 _M_fill_insert(end(), __new_size - size(), __x); ^~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from matInclude.h:40, from SizesAndBlocks.h:31, from API_test.cc:43: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector >::iterator' {aka '__gnu_cxx::__normal_iterator > >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from matInclude.h:40, from SizesAndBlocks.h:31, from API_test.cc:43: /usr/include/c++/8/bits/stl_vector.h: In member function 'void mat::Matrix::getAllValues(std::vector&, std::vector&, std::vector&) const [with Treal = double]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In member function 'void mat::Matrix::syGetAllValues(std::vector&, std::vector&, std::vector&) const [with Treal = double; Telement = mat::Matrix >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from Matrix.h:64, from API_test.cc:44: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from Matrix.h:64, from API_test.cc:44: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Distance = int; _Tp = double; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from Matrix.h:64, from API_test.cc:44: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator > >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1963:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 __sort(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~ /usr/include/c++/8/bits/stl_algo.h:1963:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'Treal mat::EuclTruncationBase::run(Treal) [with Tmatrix = mat::MatrixSymmetric > > >; Treal = double]': /usr/include/c++/8/bits/stl_algo.h:4834:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_less_iter()); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'Treal mat::EuclTruncationBase::run(Treal) [with Tmatrix = mat::MatrixSymmetric > >; Treal = double]': /usr/include/c++/8/bits/stl_algo.h:4834:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_less_iter()); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'Treal mat::EuclTruncationBase::run(Treal) [with Tmatrix = mat::MatrixTriangular > > >; Treal = double]': /usr/include/c++/8/bits/stl_algo.h:4834:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_less_iter()); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'Treal mat::EuclTruncationBase::run(Treal) [with Tmatrix = mat::MatrixGeneral > > >; Treal = double]': /usr/include/c++/8/bits/stl_algo.h:4834:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_less_iter()); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'int mainFun(int, char**) [with real = double]': /usr/include/c++/8/bits/stl_algo.h:4834:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator > >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_less_iter()); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ c++ -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -fopenmp -Wl,-z,relro -Wl,--as-needed -o mattest API_test.o libmat.a ../../source/matrix/template_lapack/blas/libtemplateblas.a ../../source/matrix/template_lapack/lapack/libtemplatelapack.a -llapack -lpthread -lm -lf77blas -latlas c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o test_LanczosSeveralLargestEig.o test_LanczosSeveralLargestEig.cc In file included from Matrix.h:69, from test_LanczosSeveralLargestEig.cc:34: sort.h:37:5: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(std::exception){ ^~~~~ c++ -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -fopenmp -Wl,-z,relro -Wl,--as-needed -o mattest_lan test_LanczosSeveralLargestEig.o libmat.a ../../source/matrix/template_lapack/blas/libtemplateblas.a ../../source/matrix/template_lapack/lapack/libtemplatelapack.a -llapack -lpthread -lm -lf77blas -latlas c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o test_vector.o test_vector.cc In file included from Matrix.h:69, from test_vector.cc:34: sort.h:37:5: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(std::exception){ ^~~~~ c++ -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -fopenmp -Wl,-z,relro -Wl,--as-needed -o test_vector test_vector.o libmat.a ../../source/matrix/template_lapack/blas/libtemplateblas.a ../../source/matrix/template_lapack/lapack/libtemplatelapack.a -llapack -lpthread -lm -lf77blas -latlas c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o testOmpFail.o testOmpFail.cc c++ -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -fopenmp -Wl,-z,relro -Wl,--as-needed -o omptest testOmpFail.o -llapack -lpthread -lm -lf77blas -latlas c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o bench.o bench.cc In file included from Matrix.h:69, from bench.cc:43: sort.h:37:5: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(std::exception){ ^~~~~ c++ -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -fopenmp -Wl,-z,relro -Wl,--as-needed -o matbench bench.o libmat.a ../../source/matrix/template_lapack/blas/libtemplateblas.a ../../source/matrix/template_lapack/lapack/libtemplatelapack.a -llapack -lpthread -lm -lf77blas -latlas c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o bench_gemm_only.o bench_gemm_only.cc In file included from Matrix.h:69, from bench_gemm_only.cc:39: sort.h:37:5: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(std::exception){ ^~~~~ c++ -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -fopenmp -Wl,-z,relro -Wl,--as-needed -o matbenchgemm bench_gemm_only.o libmat.a ../../source/matrix/template_lapack/blas/libtemplateblas.a ../../source/matrix/template_lapack/lapack/libtemplatelapack.a -llapack -lpthread -lm -lf77blas -latlas c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o blastime.o blastime.cc c++ -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -fopenmp -Wl,-z,relro -Wl,--as-needed -o blastime blastime.o libmat.a ../../source/matrix/template_lapack/blas/libtemplateblas.a ../../source/matrix/template_lapack/lapack/libtemplatelapack.a -llapack -lpthread -lm -lf77blas -latlas c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o Perturb_Test.o Perturb_Test.cc In file included from Matrix.h:69, from Perturb_Test.cc:44: sort.h:37:5: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(std::exception){ ^~~~~ c++ -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -fopenmp -Wl,-z,relro -Wl,--as-needed -o perturbtest Perturb_Test.o libmat.a ../../source/matrix/template_lapack/blas/libtemplateblas.a ../../source/matrix/template_lapack/lapack/libtemplatelapack.a -llapack -lpthread -lm -lf77blas -latlas make[5]: Leaving directory '/build/ergo-3.5/source/matrix' make[4]: Leaving directory '/build/ergo-3.5/source/matrix' Making all in matrix_wrapper make[4]: Entering directory '/build/ergo-3.5/source/matrix_wrapper' Making all in file_tools make[5]: Entering directory '/build/ergo-3.5/source/matrix_wrapper/file_tools' Making all in src make[6]: Entering directory '/build/ergo-3.5/source/matrix_wrapper/file_tools/src' c++ -DHAVE_CONFIG_H -I. -I../../../../source -I../../../../source/utilities_basic -I../../../../source/densfromf/new_purification/file_tools/src -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o files_dense.o files_dense.cc c++ -DHAVE_CONFIG_H -I. -I../../../../source -I../../../../source/utilities_basic -I../../../../source/densfromf/new_purification/file_tools/src -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o files_sparse.o files_sparse.cc cc -DHAVE_CONFIG_H -I. -I../../../../source -I../../../../source/utilities_basic -I../../../../source/densfromf/new_purification/file_tools/src -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o mmio.o mmio.c rm -f libfiles.a ar cru libfiles.a files_dense.o files_sparse.o mmio.o ar: `u' modifier ignored since `D' is the default (see `U') ranlib libfiles.a make[6]: Leaving directory '/build/ergo-3.5/source/matrix_wrapper/file_tools/src' Making all in test make[6]: Entering directory '/build/ergo-3.5/source/matrix_wrapper/file_tools/test' c++ -DHAVE_CONFIG_H -I. -I../../../../source -I../../../../source/utilities_basic -I../../../../source/matrix_wrapper/file_tools/src -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o test.o test.cc c++ -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -fopenmp -Wl,-z,relro -Wl,--as-needed -o test test.o ../../../../source/matrix_wrapper/file_tools/src/libfiles.a -llapack -lpthread -lm -lf77blas -latlas make[6]: Leaving directory '/build/ergo-3.5/source/matrix_wrapper/file_tools/test' make[6]: Entering directory '/build/ergo-3.5/source/matrix_wrapper/file_tools' make[6]: Nothing to be done for 'all-am'. make[6]: Leaving directory '/build/ergo-3.5/source/matrix_wrapper/file_tools' make[5]: Leaving directory '/build/ergo-3.5/source/matrix_wrapper/file_tools' Making all in ErgoMatrix make[5]: Entering directory '/build/ergo-3.5/source/matrix_wrapper/ErgoMatrix' Making all in src make[6]: Entering directory '/build/ergo-3.5/source/matrix_wrapper/ErgoMatrix/src' make[6]: Nothing to be done for 'all'. make[6]: Leaving directory '/build/ergo-3.5/source/matrix_wrapper/ErgoMatrix/src' Making all in test make[6]: Entering directory '/build/ergo-3.5/source/matrix_wrapper/ErgoMatrix/test' c++ -DHAVE_CONFIG_H -I. -I../../../../source -I../../../../source -I../../../../source/basisset -I../../../../source/integrals -I../../../../source/utilities -I../../../../source/utilities_basic -I../../../../source/matrix -I../../../../source/matrix/template_lapack/blas -I../../../../source/matrix/template_lapack/lapack -I../../../../source/matrix_wrapper/ErgoMatrix/src -I../../../../source/matrix_wrapper/file_tools/src -I../../../../source/densfromf/new_purification -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o test.o test.cc In file included from ../../../../source/matrix/Matrix.h:69, from ../../../../source/matrix_typedefs.h:41, from test.cc:28: ../../../../source/matrix/sort.h:37:5: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(std::exception){ ^~~~~ In file included from /usr/include/c++/8/vector:69, from ../../../../source/matrix/matInclude.h:40, from ../../../../source/matrix/MatrixHierarchicBase.h:41, from ../../../../source/matrix/Matrix.h:66, from ../../../../source/matrix_typedefs.h:41, from test.cc:28: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from ../../../../source/matrix/matInclude.h:40, from ../../../../source/matrix/MatrixHierarchicBase.h:41, from ../../../../source/matrix/Matrix.h:66, from ../../../../source/matrix_typedefs.h:41, from test.cc:28: /usr/include/c++/8/bits/stl_vector.h: In member function 'void mat::Matrix::getAllValues(std::vector&, std::vector&, std::vector&) const [with Treal = double]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In function 'void print_elements(MatrixType&)': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from ../../../../source/matrix/Matrix.h:64, from ../../../../source/matrix_typedefs.h:41, from test.cc:28: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from ../../../../source/matrix/Matrix.h:64, from ../../../../source/matrix_typedefs.h:41, from test.cc:28: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = double; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from ../../../../source/matrix/Matrix.h:64, from ../../../../source/matrix_typedefs.h:41, from test.cc:28: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'Treal mat::EuclTruncationBase::run(Treal) [with Tmatrix = mat::MatrixSymmetric > > > > >; Treal = double]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ c++ -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -fopenmp -Wl,-z,relro -Wl,--as-needed -o test test.o ../../../../source/matrix/template_lapack/blas/libtemplateblas.a ../../../../source/matrix/template_lapack/lapack/libtemplatelapack.a ../../../../source/matrix/libmat.a ../../../../source/matrix_wrapper/file_tools/src/libfiles.a -llapack -lpthread -lm -lf77blas -latlas c++ -DHAVE_CONFIG_H -I. -I../../../../source -I../../../../source -I../../../../source/basisset -I../../../../source/integrals -I../../../../source/utilities -I../../../../source/utilities_basic -I../../../../source/matrix -I../../../../source/matrix/template_lapack/blas -I../../../../source/matrix/template_lapack/lapack -I../../../../source/matrix_wrapper/ErgoMatrix/src -I../../../../source/matrix_wrapper/file_tools/src -I../../../../source/densfromf/new_purification -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o test_lan.o test_lan.cc In file included from ../../../../source/matrix/Matrix.h:69, from ../../../../source/matrix_typedefs.h:41, from test_lan.cc:28: ../../../../source/matrix/sort.h:37:5: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(std::exception){ ^~~~~ In file included from /usr/include/c++/8/vector:69, from ../../../../source/matrix/matInclude.h:40, from ../../../../source/matrix/MatrixHierarchicBase.h:41, from ../../../../source/matrix/Matrix.h:66, from ../../../../source/matrix_typedefs.h:41, from test_lan.cc:28: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from ../../../../source/matrix/matInclude.h:40, from ../../../../source/matrix/MatrixHierarchicBase.h:41, from ../../../../source/matrix/Matrix.h:66, from ../../../../source/matrix_typedefs.h:41, from test_lan.cc:28: /usr/include/c++/8/bits/stl_vector.h: In member function 'void mat::Matrix::getAllValues(std::vector&, std::vector&, std::vector&) const [with Treal = double]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In function 'void print_elements(MatrixType&)': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ c++ -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -fopenmp -Wl,-z,relro -Wl,--as-needed -o test_lan test_lan.o ../../../../source/matrix/template_lapack/blas/libtemplateblas.a ../../../../source/matrix/template_lapack/lapack/libtemplatelapack.a ../../../../source/matrix/libmat.a ../../../../source/matrix_wrapper/file_tools/src/libfiles.a -llapack -lpthread -lm -lf77blas -latlas make[6]: Leaving directory '/build/ergo-3.5/source/matrix_wrapper/ErgoMatrix/test' make[6]: Entering directory '/build/ergo-3.5/source/matrix_wrapper/ErgoMatrix' make[6]: Nothing to be done for 'all-am'. make[6]: Leaving directory '/build/ergo-3.5/source/matrix_wrapper/ErgoMatrix' make[5]: Leaving directory '/build/ergo-3.5/source/matrix_wrapper/ErgoMatrix' make[5]: Entering directory '/build/ergo-3.5/source/matrix_wrapper' make[5]: Nothing to be done for 'all-am'. make[5]: Leaving directory '/build/ergo-3.5/source/matrix_wrapper' make[4]: Leaving directory '/build/ergo-3.5/source/matrix_wrapper' Making all in densfromf make[4]: Entering directory '/build/ergo-3.5/source/densfromf' Making all in recursive_expansion make[5]: Entering directory '/build/ergo-3.5/source/densfromf/recursive_expansion' Making all in src make[6]: Entering directory '/build/ergo-3.5/source/densfromf/recursive_expansion/src' c++ -DHAVE_CONFIG_H -I. -I../../../../source -I../../../../source -I../../../../source/basisset -I../../../../source/integrals -I../../../../source/utilities -I../../../../source/utilities_basic -I../../../../source/matrix -I../../../../source/matrix/template_lapack/blas -I../../../../source/matrix/template_lapack/lapack -I../../../../source/matrix_wrapper/ErgoMatrix/src -I../../../../source/matrix_wrapper/file_tools/src -I../../../../source/densfromf/new_purification -I../../../../source/densfromf/new_purification/src -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o purification_general.o purification_general.cc In file included from ../../../../source/matrix/Matrix.h:69, from ../../../../source/matrix_typedefs.h:41, from purification_general.h:38, from purification_general.cc:39: ../../../../source/matrix/sort.h:37:5: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(std::exception){ ^~~~~ c++ -DHAVE_CONFIG_H -I. -I../../../../source -I../../../../source -I../../../../source/basisset -I../../../../source/integrals -I../../../../source/utilities -I../../../../source/utilities_basic -I../../../../source/matrix -I../../../../source/matrix/template_lapack/blas -I../../../../source/matrix/template_lapack/lapack -I../../../../source/matrix_wrapper/ErgoMatrix/src -I../../../../source/matrix_wrapper/file_tools/src -I../../../../source/densfromf/new_purification -I../../../../source/densfromf/new_purification/src -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o puri_info.o puri_info.cc In file included from ../../../../source/matrix/Matrix.h:69, from ../../../../source/matrix_typedefs.h:41, from puri_info.h:32, from puri_info.cc:28: ../../../../source/matrix/sort.h:37:5: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(std::exception){ ^~~~~ c++ -DHAVE_CONFIG_H -I. -I../../../../source -I../../../../source -I../../../../source/basisset -I../../../../source/integrals -I../../../../source/utilities -I../../../../source/utilities_basic -I../../../../source/matrix -I../../../../source/matrix/template_lapack/blas -I../../../../source/matrix/template_lapack/lapack -I../../../../source/matrix_wrapper/ErgoMatrix/src -I../../../../source/matrix_wrapper/file_tools/src -I../../../../source/densfromf/new_purification -I../../../../source/densfromf/new_purification/src -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o random_matrices.o random_matrices.cc In file included from ../../../../source/matrix/Matrix.h:69, from ../../../../source/matrix_typedefs.h:41, from random_matrices.h:28, from random_matrices.cc:28: ../../../../source/matrix/sort.h:37:5: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(std::exception){ ^~~~~ In file included from /usr/include/c++/8/vector:69, from ../../../../source/matrix/matInclude.h:40, from ../../../../source/matrix/MatrixHierarchicBase.h:41, from ../../../../source/matrix/Matrix.h:66, from ../../../../source/matrix_typedefs.h:41, from random_matrices.h:28, from random_matrices.cc:28: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from ../../../../source/matrix/matInclude.h:40, from ../../../../source/matrix/MatrixHierarchicBase.h:41, from ../../../../source/matrix/Matrix.h:66, from ../../../../source/matrix_typedefs.h:41, from random_matrices.h:28, from random_matrices.cc:28: /usr/include/c++/8/bits/stl_vector.h: In member function 'void mat::Matrix::getValues(const std::vector&, const std::vector&, std::vector&) const [with Treal = double; Telement = mat::Matrix > > >]': /usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_fill_insert(end(), __new_size - size(), __x); ^~~~~~~~~~~~~~ rm -f libpurification.a ar cru libpurification.a purification_general.o puri_info.o random_matrices.o ar: `u' modifier ignored since `D' is the default (see `U') ranlib libpurification.a make[6]: Leaving directory '/build/ergo-3.5/source/densfromf/recursive_expansion/src' make[6]: Entering directory '/build/ergo-3.5/source/densfromf/recursive_expansion' make[6]: Nothing to be done for 'all-am'. make[6]: Leaving directory '/build/ergo-3.5/source/densfromf/recursive_expansion' make[5]: Leaving directory '/build/ergo-3.5/source/densfromf/recursive_expansion' make[5]: Entering directory '/build/ergo-3.5/source/densfromf' c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/basisset -I../../source/integrals -I../../source/utilities -I../../source/utilities_basic -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -I../../source/densfromf/recursive_expansion -I../../source/densfromf/recursive_expansion/src -I../../source/matrix_wrapper -I../../source/matrix_wrapper/ErgoMatrix/src -I../../source/matrix_wrapper/file_tools/src -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o densfromf_full.o densfromf_full.cc c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/basisset -I../../source/integrals -I../../source/utilities -I../../source/utilities_basic -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -I../../source/densfromf/recursive_expansion -I../../source/densfromf/recursive_expansion/src -I../../source/matrix_wrapper -I../../source/matrix_wrapper/ErgoMatrix/src -I../../source/matrix_wrapper/file_tools/src -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o densfromf_stochastic.o densfromf_stochastic.cc In file included from ../../source/matrix/Matrix.h:69, from ../../source/matrix_typedefs.h:41, from densfromf_stochastic.h:33, from densfromf_stochastic.cc:35: ../../source/matrix/sort.h:37:5: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(std::exception){ ^~~~~ c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/basisset -I../../source/integrals -I../../source/utilities -I../../source/utilities_basic -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -I../../source/densfromf/recursive_expansion -I../../source/densfromf/recursive_expansion/src -I../../source/matrix_wrapper -I../../source/matrix_wrapper/ErgoMatrix/src -I../../source/matrix_wrapper/file_tools/src -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o puri_mmul_tests.o puri_mmul_tests.cc In file included from ../../source/matrix/Matrix.h:69, from ../../source/matrix_typedefs.h:41, from puri_mmul_tests.h:33, from puri_mmul_tests.cc:31: ../../source/matrix/sort.h:37:5: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(std::exception){ ^~~~~ In file included from /usr/include/c++/8/algorithm:62, from ../../source/matrix/Matrix.h:64, from ../../source/matrix_typedefs.h:41, from puri_mmul_tests.h:33, from puri_mmul_tests.cc:31: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from ../../source/matrix/Matrix.h:64, from ../../source/matrix_typedefs.h:41, from puri_mmul_tests.h:33, from puri_mmul_tests.cc:31: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = double; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from ../../source/matrix/Matrix.h:64, from ../../source/matrix_typedefs.h:41, from puri_mmul_tests.h:33, from puri_mmul_tests.cc:31: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'Treal mat::EuclTruncationBase::run(Treal) [with Tmatrix = mat::MatrixSymmetric > > > > >; Treal = double]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from ../../source/matrix/matInclude.h:40, from ../../source/matrix/MatrixHierarchicBase.h:41, from ../../source/matrix/Matrix.h:66, from ../../source/matrix_typedefs.h:41, from puri_mmul_tests.h:33, from puri_mmul_tests.cc:31: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 /usr/include/c++/8/bits/vector.tcc: In member function 'void mat::EuclTruncationSymm::getFrobSqNorms(std::vector&) [with Tmatrix = mat::MatrixSymmetric > > > > >; Treal = double]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/basisset -I../../source/integrals -I../../source/utilities -I../../source/utilities_basic -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -I../../source/densfromf/recursive_expansion -I../../source/densfromf/recursive_expansion/src -I../../source/matrix_wrapper -I../../source/matrix_wrapper/ErgoMatrix/src -I../../source/matrix_wrapper/file_tools/src -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o simple_purification.o simple_purification.cc In file included from ../../source/matrix/Matrix.h:69, from ../../source/matrix_typedefs.h:41, from simple_purification.h:33, from simple_purification.cc:31: ../../source/matrix/sort.h:37:5: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(std::exception){ ^~~~~ c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/basisset -I../../source/integrals -I../../source/utilities -I../../source/utilities_basic -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -I../../source/densfromf/recursive_expansion -I../../source/densfromf/recursive_expansion/src -I../../source/matrix_wrapper -I../../source/matrix_wrapper/ErgoMatrix/src -I../../source/matrix_wrapper/file_tools/src -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o GetDensFromFock.o GetDensFromFock.cc In file included from ../../source/matrix/Matrix.h:69, from ../../source/matrix_typedefs.h:41, from ../../source/utilities/matrix_utilities.h:32, from GetDensFromFock.cc:48: ../../source/matrix/sort.h:37:5: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(std::exception){ ^~~~~ In file included from /usr/include/c++/8/vector:69, from ../../source/matrix/matInclude.h:40, from ../../source/matrix/MatrixHierarchicBase.h:41, from ../../source/matrix/Matrix.h:66, from ../../source/matrix_typedefs.h:41, from ../../source/utilities/matrix_utilities.h:32, from GetDensFromFock.cc:48: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from ../../source/matrix/matInclude.h:40, from ../../source/matrix/MatrixHierarchicBase.h:41, from ../../source/matrix/Matrix.h:66, from ../../source/matrix_typedefs.h:41, from ../../source/utilities/matrix_utilities.h:32, from GetDensFromFock.cc:48: /usr/include/c++/8/bits/stl_vector.h: In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from ../../source/matrix/matInclude.h:40, from ../../source/matrix/MatrixHierarchicBase.h:41, from ../../source/matrix/Matrix.h:66, from ../../source/matrix_typedefs.h:41, from ../../source/utilities/matrix_utilities.h:32, from GetDensFromFock.cc:48: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const IterationInfo&}; _Tp = IterationInfo; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from ../../source/matrix/Matrix.h:64, from ../../source/matrix_typedefs.h:41, from ../../source/utilities/matrix_utilities.h:32, from GetDensFromFock.cc:48: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1880:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __final_insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1880:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from ../../source/matrix/matInclude.h:40, from ../../source/matrix/MatrixHierarchicBase.h:41, from ../../source/matrix/Matrix.h:66, from ../../source/matrix_typedefs.h:41, from ../../source/utilities/matrix_utilities.h:32, from GetDensFromFock.cc:48: /usr/include/c++/8/bits/stl_vector.h: In member function 'void mat::Matrix::getAllValues(std::vector&, std::vector&, std::vector&) const [with Treal = double]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In function 'void output_magnitude_histogram(const Tmatrix&, std::__cxx11::string, int) [with Tmatrix = mat::MatrixSymmetric > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from ../../source/matrix/Matrix.h:64, from ../../source/matrix_typedefs.h:41, from ../../source/utilities/matrix_utilities.h:32, from GetDensFromFock.cc:48: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = double; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from ../../source/matrix/Matrix.h:64, from ../../source/matrix_typedefs.h:41, from ../../source/utilities/matrix_utilities.h:32, from GetDensFromFock.cc:48: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'Treal mat::EuclTruncationBase::run(Treal) [with Tmatrix = mat::MatrixSymmetric > > > > >; Treal = double]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1971:31: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__final_insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'Treal mat::EuclTruncationBase::run(Treal) [with Tmatrix = mat::MatrixSymmetric > > > >; Treal = double]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1971:31: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__final_insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from ../../source/matrix/matInclude.h:40, from ../../source/matrix/MatrixHierarchicBase.h:41, from ../../source/matrix/Matrix.h:66, from ../../source/matrix_typedefs.h:41, from ../../source/utilities/matrix_utilities.h:32, from GetDensFromFock.cc:48: /usr/include/c++/8/bits/stl_vector.h: In member function 'void PurificationGeneral::purification_process() [with MatrixType = ErgoMatrix > > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from ../../source/matrix/Matrix.h:64, from ../../source/matrix_typedefs.h:41, from ../../source/utilities/matrix_utilities.h:32, from GetDensFromFock.cc:48: /usr/include/c++/8/bits/stl_algo.h: In member function 'Treal mat::MatrixSymmetric::thresh(Treal, mat::normType) [with Treal = double; Tmatrix = mat::Matrix > > > >]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1971:31: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__final_insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from ../../source/matrix/matInclude.h:40, from ../../source/matrix/MatrixHierarchicBase.h:41, from ../../source/matrix/Matrix.h:66, from ../../source/matrix_typedefs.h:41, from ../../source/utilities/matrix_utilities.h:32, from GetDensFromFock.cc:48: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from ../../source/matrix/matInclude.h:40, from ../../source/matrix/MatrixHierarchicBase.h:41, from ../../source/matrix/Matrix.h:66, from ../../source/matrix_typedefs.h:41, from ../../source/utilities/matrix_utilities.h:32, from GetDensFromFock.cc:48: /usr/include/c++/8/bits/stl_vector.h: In member function 'void std::vector<_Tp, _Alloc>::resize(std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator]': /usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_fill_insert(end(), __new_size - size(), __x); ^~~~~~~~~~~~~~ rm -f libdensfromf.a ar cru libdensfromf.a densfromf_full.o densfromf_stochastic.o puri_mmul_tests.o simple_purification.o GetDensFromFock.o ar: `u' modifier ignored since `D' is the default (see `U') ranlib libdensfromf.a make[5]: Leaving directory '/build/ergo-3.5/source/densfromf' make[4]: Leaving directory '/build/ergo-3.5/source/densfromf' Making all in dft make[4]: Entering directory '/build/ergo-3.5/source/dft' c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/basisset -I../../source/utilities -I../../source/utilities_basic -I../../source/integrals -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o aos.o aos.cc c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/basisset -I../../source/utilities -I../../source/utilities_basic -I../../source/integrals -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o cubature_rules.o cubature_rules.cc c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/basisset -I../../source/utilities -I../../source/utilities_basic -I../../source/integrals -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o dft_common.o dft_common.cc In file included from ../../source/matrix/Matrix.h:69, from ../../source/matrix_typedefs.h:41, from dft_common.h:43, from dft_common.cc:52: ../../source/matrix/sort.h:37:5: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(std::exception){ ^~~~~ cc -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/basisset -I../../source/utilities -I../../source/utilities_basic -I../../source/integrals -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o fun-becke.o fun-becke.c cc -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/basisset -I../../source/utilities -I../../source/utilities_basic -I../../source/integrals -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o fun-cam.o fun-cam.c cc -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/basisset -I../../source/utilities -I../../source/utilities_basic -I../../source/integrals -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o fun-gga.o fun-gga.c cc -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/basisset -I../../source/utilities -I../../source/utilities_basic -I../../source/integrals -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o fun-kt.o fun-kt.c cc -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/basisset -I../../source/utilities -I../../source/utilities_basic -I../../source/integrals -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o fun-lb94.o fun-lb94.c cc -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/basisset -I../../source/utilities -I../../source/utilities_basic -I../../source/integrals -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o fun-lyp.o fun-lyp.c cc -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/basisset -I../../source/utilities -I../../source/utilities_basic -I../../source/integrals -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o fun-optx.o fun-optx.c cc -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/basisset -I../../source/utilities -I../../source/utilities_basic -I../../source/integrals -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o fun-p86c.o fun-p86c.c cc -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/basisset -I../../source/utilities -I../../source/utilities_basic -I../../source/integrals -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o fun-pbec.o fun-pbec.c cc -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/basisset -I../../source/utilities -I../../source/utilities_basic -I../../source/integrals -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o fun-pbex.o fun-pbex.c cc -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/basisset -I../../source/utilities -I../../source/utilities_basic -I../../source/integrals -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o fun-pw86x.o fun-pw86x.c cc -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/basisset -I../../source/utilities -I../../source/utilities_basic -I../../source/integrals -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o fun-pw91c.o fun-pw91c.c cc -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/basisset -I../../source/utilities -I../../source/utilities_basic -I../../source/integrals -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o fun-pw91x.o fun-pw91x.c cc -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/basisset -I../../source/utilities -I../../source/utilities_basic -I../../source/integrals -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o fun-pw92c.o fun-pw92c.c cc -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/basisset -I../../source/utilities -I../../source/utilities_basic -I../../source/integrals -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o fun-pz81.o fun-pz81.c cc -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/basisset -I../../source/utilities -I../../source/utilities_basic -I../../source/integrals -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o fun-slater.o fun-slater.c c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/basisset -I../../source/utilities -I../../source/utilities_basic -I../../source/integrals -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o fun-tester.o fun-tester.cc In file included from ../../source/matrix/Matrix.h:69, from ../../source/matrix_typedefs.h:41, from dft_common.h:43, from fun-tester.cc:54: ../../source/matrix/sort.h:37:5: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(std::exception){ ^~~~~ cc -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/basisset -I../../source/utilities -I../../source/utilities_basic -I../../source/integrals -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o fun-vwn.o fun-vwn.c cc -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/basisset -I../../source/utilities -I../../source/utilities_basic -I../../source/integrals -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o functionals.o functionals.c c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/basisset -I../../source/utilities -I../../source/utilities_basic -I../../source/integrals -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o grid_atomic.o grid_atomic.cc In file included from ../../source/matrix/Matrix.h:69, from ../../source/matrix_typedefs.h:41, from grid_atomic.h:37, from grid_atomic.cc:35: ../../source/matrix/sort.h:37:5: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(std::exception){ ^~~~~ c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/basisset -I../../source/utilities -I../../source/utilities_basic -I../../source/integrals -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o grid_hicu.o grid_hicu.cc In file included from ../../source/matrix/Matrix.h:69, from ../../source/matrix_typedefs.h:41, from sparse_matrix.h:43, from grid_matrix.h:31, from grid_hicu.h:32, from grid_hicu.cc:50: ../../source/matrix/sort.h:37:5: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(std::exception){ ^~~~~ c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/basisset -I../../source/utilities -I../../source/utilities_basic -I../../source/integrals -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o grid_reader.o grid_reader.cc In file included from ../../source/matrix/Matrix.h:69, from ../../source/matrix_typedefs.h:41, from dft_common.h:43, from grid_reader.cc:35: ../../source/matrix/sort.h:37:5: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(std::exception){ ^~~~~ c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/basisset -I../../source/utilities -I../../source/utilities_basic -I../../source/integrals -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o grid_stream.o grid_stream.cc In file included from ../../source/matrix/Matrix.h:69, from ../../source/matrix_typedefs.h:41, from dft_common.h:43, from grid_stream.cc:50: ../../source/matrix/sort.h:37:5: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(std::exception){ ^~~~~ In file included from /usr/include/c++/8/vector:69, from grid_stream.cc:48: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {Grid::AtomicGrid}; _Tp = Grid::AtomicGrid; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {Grid::AtomicGrid}; _Tp = Grid::AtomicGrid; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/basisset -I../../source/utilities -I../../source/utilities_basic -I../../source/integrals -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o integrator.o integrator.cc In file included from ../../source/matrix/Matrix.h:69, from ../../source/matrix_typedefs.h:41, from integrator.h:37, from integrator.cc:65: ../../source/matrix/sort.h:37:5: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(std::exception){ ^~~~~ c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/basisset -I../../source/utilities -I../../source/utilities_basic -I../../source/integrals -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o lebedev_laikov.o lebedev_laikov.cc c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/basisset -I../../source/utilities -I../../source/utilities_basic -I../../source/integrals -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o lin_trans.o lin_trans.cc In file included from ../../source/matrix/Matrix.h:69, from ../../source/matrix_typedefs.h:41, from dft_common.h:43, from lin_trans.cc:45: ../../source/matrix/sort.h:37:5: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(std::exception){ ^~~~~ c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/basisset -I../../source/utilities -I../../source/utilities_basic -I../../source/integrals -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o rho-mat.o rho-mat.cc In file included from ../../source/matrix/Matrix.h:69, from ../../source/matrix_typedefs.h:41, from sparse_matrix.h:43, from grid_matrix.h:31, from rho-mat.h:32, from rho-mat.cc:44: ../../source/matrix/sort.h:37:5: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(std::exception){ ^~~~~ c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/basisset -I../../source/utilities -I../../source/utilities_basic -I../../source/integrals -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o sparse_matrix.o sparse_matrix.cc In file included from ../../source/matrix/Matrix.h:69, from ../../source/matrix_typedefs.h:41, from dft_common.h:43, from sparse_matrix.cc:46: ../../source/matrix/sort.h:37:5: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(std::exception){ ^~~~~ In file included from /usr/include/c++/8/vector:69, from sparse_matrix.cc:42: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from sparse_matrix.cc:42: /usr/include/c++/8/bits/stl_vector.h: In member function 'void mat::Matrix::getValues(const std::vector&, const std::vector&, std::vector&) const [with Treal = double; Telement = mat::Matrix > > >]': /usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_fill_insert(end(), __new_size - size(), __x); ^~~~~~~~~~~~~~ c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/basisset -I../../source/utilities -I../../source/utilities_basic -I../../source/integrals -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o sparse_pattern.o sparse_pattern.cc In file included from ../../source/matrix/Matrix.h:69, from ../../source/matrix_typedefs.h:41, from dft_common.h:43, from sparse_pattern.cc:30: ../../source/matrix/sort.h:37:5: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(std::exception){ ^~~~~ c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/basisset -I../../source/utilities -I../../source/utilities_basic -I../../source/integrals -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o xc_matrix.o xc_matrix.cc In file included from ../../source/matrix/Matrix.h:69, from ../../source/matrix_typedefs.h:41, from integrator.h:37, from xc_matrix.cc:57: ../../source/matrix/sort.h:37:5: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(std::exception){ ^~~~~ c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/basisset -I../../source/utilities -I../../source/utilities_basic -I../../source/integrals -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o xc_matrix_sparse.o xc_matrix_sparse.cc In file included from ../../source/matrix/Matrix.h:69, from ../../source/matrix_typedefs.h:41, from integrator.h:37, from xc_matrix_sparse.cc:45: ../../source/matrix/sort.h:37:5: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(std::exception){ ^~~~~ rm -f libdft.a ar cru libdft.a aos.o cubature_rules.o dft_common.o fun-becke.o fun-cam.o fun-gga.o fun-kt.o fun-lb94.o fun-lyp.o fun-optx.o fun-p86c.o fun-pbec.o fun-pbex.o fun-pw86x.o fun-pw91c.o fun-pw91x.o fun-pw92c.o fun-pz81.o fun-slater.o fun-tester.o fun-vwn.o functionals.o grid_atomic.o grid_hicu.o grid_reader.o grid_stream.o integrator.o lebedev_laikov.o lin_trans.o rho-mat.o sparse_matrix.o sparse_pattern.o xc_matrix.o xc_matrix_sparse.o ar: `u' modifier ignored since `D' is the default (see `U') ranlib libdft.a make[4]: Leaving directory '/build/ergo-3.5/source/dft' Making all in electron_dynamics make[4]: Entering directory '/build/ergo-3.5/source/electron_dynamics' c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/utilities -I../../source/utilities_basic -I../../source/basisset -I../../source/integrals -I../../source/scf -I../../source/dft -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o tdhf_dynamics.o tdhf_dynamics.cc In file included from ../../source/matrix/Matrix.h:69, from ../../source/matrix_typedefs.h:41, from tdhf_dynamics.h:33, from tdhf_dynamics.cc:44: ../../source/matrix/sort.h:37:5: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(std::exception){ ^~~~~ rm -f libelectron_dynamics.a ar cru libelectron_dynamics.a tdhf_dynamics.o ar: `u' modifier ignored since `D' is the default (see `U') ranlib libelectron_dynamics.a make[4]: Leaving directory '/build/ergo-3.5/source/electron_dynamics' Making all in integrals make[4]: Entering directory '/build/ergo-3.5/source/integrals' c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/utilities -I../../source/utilities_basic -I../../source/basisset -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o basis_func_extent.o basis_func_extent.cc c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/utilities -I../../source/utilities_basic -I../../source/basisset -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o basis_func_extent_1el.o basis_func_extent_1el.cc c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/utilities -I../../source/utilities_basic -I../../source/basisset -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o basis_func_pair_list.o basis_func_pair_list.cc c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/utilities -I../../source/utilities_basic -I../../source/basisset -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o basis_func_pair_list_1el.o basis_func_pair_list_1el.cc c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/utilities -I../../source/utilities_basic -I../../source/basisset -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o box_system.o box_system.cc c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/utilities -I../../source/utilities_basic -I../../source/basisset -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o boysfunction.o boysfunction.cc c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/utilities -I../../source/utilities_basic -I../../source/basisset -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o densityfitting.o densityfitting.cc c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/utilities -I../../source/utilities_basic -I../../source/basisset -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o exponent_list.o exponent_list.cc c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/utilities -I../../source/utilities_basic -I../../source/basisset -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o hermite_conversion_explicit.o hermite_conversion_explicit.cc c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/utilities -I../../source/utilities_basic -I../../source/basisset -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o hermite_conversion_prep.o hermite_conversion_prep.cc c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/utilities -I../../source/utilities_basic -I../../source/basisset -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o hermite_conversion_symb.o hermite_conversion_symb.cc c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/utilities -I../../source/utilities_basic -I../../source/basisset -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o integral_info.o integral_info.cc c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/utilities -I../../source/utilities_basic -I../../source/basisset -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o integrals_1el.o integrals_1el.cc c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/utilities -I../../source/utilities_basic -I../../source/basisset -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o integrals_1el_kinetic.o integrals_1el_kinetic.cc c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/utilities -I../../source/utilities_basic -I../../source/basisset -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o integrals_1el_potential.o integrals_1el_potential.cc c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/utilities -I../../source/utilities_basic -I../../source/basisset -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o integrals_1el_single.o integrals_1el_single.cc c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/utilities -I../../source/utilities_basic -I../../source/basisset -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o integrals_2el_boxed.o integrals_2el_boxed.cc c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/utilities -I../../source/utilities_basic -I../../source/basisset -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o integrals_2el_coulomb.o integrals_2el_coulomb.cc c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/utilities -I../../source/utilities_basic -I../../source/basisset -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o integrals_2el_exchange.o integrals_2el_exchange.cc c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/utilities -I../../source/utilities_basic -I../../source/basisset -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o integrals_2el_exchange_prep.o integrals_2el_exchange_prep.cc c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/utilities -I../../source/utilities_basic -I../../source/basisset -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o integrals_2el_explicit.o integrals_2el_explicit.cc c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/utilities -I../../source/utilities_basic -I../../source/basisset -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o integrals_2el_layer.o integrals_2el_layer.cc c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/utilities -I../../source/utilities_basic -I../../source/basisset -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o integrals_2el_repeating.o integrals_2el_repeating.cc c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/utilities -I../../source/utilities_basic -I../../source/basisset -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o integrals_2el_single.o integrals_2el_single.cc c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/utilities -I../../source/utilities_basic -I../../source/basisset -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o integrals_2el_util_funcs.o integrals_2el_util_funcs.cc c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/utilities -I../../source/utilities_basic -I../../source/basisset -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o integrals_2el_utils.o integrals_2el_utils.cc c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/utilities -I../../source/utilities_basic -I../../source/basisset -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o integrals_general.o integrals_general.cc c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/utilities -I../../source/utilities_basic -I../../source/basisset -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o integrals_hermite.o integrals_hermite.cc c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/utilities -I../../source/utilities_basic -I../../source/basisset -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o matrix_norm.o matrix_norm.cc c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/utilities -I../../source/utilities_basic -I../../source/basisset -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o mm_limit_table.o mm_limit_table.cc c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/utilities -I../../source/utilities_basic -I../../source/basisset -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o monomial_info.o monomial_info.cc c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/utilities -I../../source/utilities_basic -I../../source/basisset -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o multipole.o multipole.cc c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/utilities -I../../source/utilities_basic -I../../source/basisset -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o operator_matrix.o operator_matrix.cc c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/utilities -I../../source/utilities_basic -I../../source/basisset -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o organize_distrs.o organize_distrs.cc c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/utilities -I../../source/utilities_basic -I../../source/basisset -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o simple_sparse_mat.o simple_sparse_mat.cc rm -f libintegrals.a ar cru libintegrals.a basis_func_extent.o basis_func_extent_1el.o basis_func_pair_list.o basis_func_pair_list_1el.o box_system.o boysfunction.o densityfitting.o exponent_list.o hermite_conversion_explicit.o hermite_conversion_prep.o hermite_conversion_symb.o integral_info.o integrals_1el.o integrals_1el_kinetic.o integrals_1el_potential.o integrals_1el_single.o integrals_2el_boxed.o integrals_2el_coulomb.o integrals_2el_exchange.o integrals_2el_exchange_prep.o integrals_2el_explicit.o integrals_2el_layer.o integrals_2el_repeating.o integrals_2el_single.o integrals_2el_util_funcs.o integrals_2el_utils.o integrals_general.o integrals_hermite.o matrix_norm.o mm_limit_table.o monomial_info.o multipole.o operator_matrix.o organize_distrs.o simple_sparse_mat.o ar: `u' modifier ignored since `D' is the default (see `U') ranlib libintegrals.a make[4]: Leaving directory '/build/ergo-3.5/source/integrals' Making all in scf make[4]: Entering directory '/build/ergo-3.5/source/scf' c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/basisset -I../../source/dft -I../../source/matrix -I../../source/matrix_wrapper -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -I../../source/densfromf -I../../source/utilities -I../../source/utilities_basic -I../../source/integrals -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o diis_general.o diis_general.cc In file included from ../../source/matrix/Matrix.h:69, from ../../source/matrix_typedefs.h:41, from diis_general.h:33, from diis_general.cc:31: ../../source/matrix/sort.h:37:5: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(std::exception){ ^~~~~ c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/basisset -I../../source/dft -I../../source/matrix -I../../source/matrix_wrapper -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -I../../source/densfromf -I../../source/utilities -I../../source/utilities_basic -I../../source/integrals -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o diis_restricted.o diis_restricted.cc In file included from ../../source/matrix/Matrix.h:69, from ../../source/matrix_typedefs.h:41, from diis_general.h:33, from diis_restricted.h:32, from diis_restricted.cc:31: ../../source/matrix/sort.h:37:5: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(std::exception){ ^~~~~ c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/basisset -I../../source/dft -I../../source/matrix -I../../source/matrix_wrapper -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -I../../source/densfromf -I../../source/utilities -I../../source/utilities_basic -I../../source/integrals -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o diis_unrestricted.o diis_unrestricted.cc In file included from ../../source/matrix/Matrix.h:69, from ../../source/matrix_typedefs.h:41, from diis_general.h:33, from diis_unrestricted.h:32, from diis_unrestricted.cc:31: ../../source/matrix/sort.h:37:5: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(std::exception){ ^~~~~ c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/basisset -I../../source/dft -I../../source/matrix -I../../source/matrix_wrapper -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -I../../source/densfromf -I../../source/utilities -I../../source/utilities_basic -I../../source/integrals -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o scf_utils.o scf_utils.cc In file included from ../../source/matrix/Matrix.h:69, from ../../source/matrix_typedefs.h:41, from scf_utils.h:35, from scf_utils.cc:41: ../../source/matrix/sort.h:37:5: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(std::exception){ ^~~~~ In file included from /usr/include/c++/8/vector:69, from ../../source/utilities_basic/molecule.h:33, from scf_utils.h:32, from scf_utils.cc:41: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from ../../source/matrix/Matrix.h:64, from ../../source/matrix_typedefs.h:41, from scf_utils.h:35, from scf_utils.cc:41: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:64, from ../../source/utilities_basic/molecule.h:33, from scf_utils.h:32, from scf_utils.cc:41: /usr/include/c++/8/bits/stl_vector.h: In member function 'void mat::Matrix::getValues(const std::vector&, const std::vector&, std::vector&) const [with Treal = double; Telement = mat::Matrix > > >]': /usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_fill_insert(end(), __new_size - size(), __x); ^~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In member function 'void mat::Matrix::getAllValues(std::vector&, std::vector&, std::vector&) const [with Treal = double]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In member function 'void mat::Matrix::syGetAllValues(std::vector&, std::vector&, std::vector&) const [with Treal = double; Telement = mat::Matrix > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In function 'void get_all_nonzeros(const Tmatrix&, const std::vector&, std::vector&, std::vector&, std::vector&) [with Tmatrix = mat::MatrixSymmetric > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from ../../source/matrix/Matrix.h:64, from ../../source/matrix_typedefs.h:41, from scf_utils.h:35, from scf_utils.cc:41: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = double; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from ../../source/matrix/Matrix.h:64, from ../../source/matrix_typedefs.h:41, from scf_utils.h:35, from scf_utils.cc:41: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'Treal mat::EuclTruncationBase::run(Treal) [with Tmatrix = mat::MatrixGeneral > > > > >; Treal = double]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/basisset -I../../source/dft -I../../source/matrix -I../../source/matrix_wrapper -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -I../../source/densfromf -I../../source/utilities -I../../source/utilities_basic -I../../source/integrals -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o SCF_general.o SCF_general.cc In file included from ../../source/matrix/Matrix.h:69, from ../../source/matrix_typedefs.h:41, from ../../source/dft/sparse_matrix.h:43, from ../../source/dft/grid_stream.h:34, from SCF_general.h:35, from SCF_general.cc:32: ../../source/matrix/sort.h:37:5: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(std::exception){ ^~~~~ In file included from /usr/include/c++/8/vector:69, from ../../source/utilities_basic/molecule.h:33, from SCF_general.h:32, from SCF_general.cc:32: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from ../../source/utilities_basic/molecule.h:33, from SCF_general.h:32, from SCF_general.cc:32: /usr/include/c++/8/bits/stl_vector.h: In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from ../../source/dft/sparse_matrix.h:39, from ../../source/dft/grid_stream.h:34, from SCF_general.h:35, from SCF_general.cc:32: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from ../../source/dft/sparse_matrix.h:39, from ../../source/dft/grid_stream.h:34, from SCF_general.h:35, from SCF_general.cc:32: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = double; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from ../../source/dft/sparse_matrix.h:39, from ../../source/dft/grid_stream.h:34, from SCF_general.h:35, from SCF_general.cc:32: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1963:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __sort(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~ /usr/include/c++/8/bits/stl_algo.h:1963:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'Treal mat::EuclTruncationBase::run(Treal) [with Tmatrix = mat::MatrixTriangular > > > > >; Treal = double]': /usr/include/c++/8/bits/stl_algo.h:4834:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_less_iter()); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'Treal mat::EuclTruncationBase::run(Treal) [with Tmatrix = mat::MatrixGeneral > > > > >; Treal = double]': /usr/include/c++/8/bits/stl_algo.h:4834:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_less_iter()); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'Treal mat::EuclTruncationBase::run(Treal) [with Tmatrix = mat::MatrixSymmetric > > > > >; Treal = double]': /usr/include/c++/8/bits/stl_algo.h:4834:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_less_iter()); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In static member function 'static void mat::Matrix::syInch(const mat::Matrix&, mat::Matrix&, Treal, mat::side, mat::inchversion) [with Treal = double; Telement = mat::Matrix >]': /usr/include/c++/8/bits/stl_algo.h:4834:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_less_iter()); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from ../../source/utilities_basic/molecule.h:33, from SCF_general.h:32, from SCF_general.cc:32: /usr/include/c++/8/bits/stl_vector.h: In member function 'void mat::Matrix::getAllValues(std::vector&, std::vector&, std::vector&) const [with Treal = double]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In member function 'void mat::Matrix::syGetAllValues(std::vector&, std::vector&, std::vector&) const [with Treal = double; Telement = mat::Matrix > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In function 'void get_all_nonzeros(const Tmatrix&, const std::vector&, std::vector&, std::vector&, std::vector&) [with Tmatrix = mat::MatrixSymmetric > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from ../../source/dft/sparse_matrix.h:39, from ../../source/dft/grid_stream.h:34, from SCF_general.h:35, from SCF_general.cc:32: /usr/include/c++/8/bits/stl_algo.h: In constructor 'SCF_general::SCF_general(const Molecule&, const Molecule&, const BasisInfoStruct&, const BasisInfoStruct&, const IntegralInfo&, const char*, const JK::Params&, const Dft::GridParams&, const SCF::Options&, const SCF::MatOptions&, ergo_real)': /usr/include/c++/8/bits/stl_algo.h:4834:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_less_iter()); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:4834:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_less_iter()); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/basisset -I../../source/dft -I../../source/matrix -I../../source/matrix_wrapper -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -I../../source/densfromf -I../../source/utilities -I../../source/utilities_basic -I../../source/integrals -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o SCF_restricted.o SCF_restricted.cc In file included from ../../source/matrix/Matrix.h:69, from ../../source/matrix_typedefs.h:41, from ../../source/dft/sparse_matrix.h:43, from ../../source/dft/grid_stream.h:34, from SCF_general.h:35, from SCF_restricted.h:32, from SCF_restricted.cc:30: ../../source/matrix/sort.h:37:5: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(std::exception){ ^~~~~ In file included from /usr/include/c++/8/vector:69, from ../../source/utilities_basic/molecule.h:33, from SCF_general.h:32, from SCF_restricted.h:32, from SCF_restricted.cc:30: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from ../../source/dft/sparse_matrix.h:39, from ../../source/dft/grid_stream.h:34, from SCF_general.h:35, from SCF_restricted.h:32, from SCF_restricted.cc:30: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:64, from ../../source/utilities_basic/molecule.h:33, from SCF_general.h:32, from SCF_restricted.h:32, from SCF_restricted.cc:30: /usr/include/c++/8/bits/stl_vector.h: In member function 'void mat::Matrix::getAllValues(std::vector&, std::vector&, std::vector&) const [with Treal = double]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In member function 'void mat::Matrix::syGetAllValues(std::vector&, std::vector&, std::vector&) const [with Treal = double; Telement = mat::Matrix > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In function 'void get_all_nonzeros(const Tmatrix&, const std::vector&, std::vector&, std::vector&, std::vector&) [with Tmatrix = mat::MatrixSymmetric > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In function 'void output_distance_vs_magnitude(const BasisInfoStruct&, const Tmatrix&, const std::vector&, std::__cxx11::string, int, int) [with Tmatrix = mat::MatrixSymmetric > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from ../../source/dft/sparse_matrix.h:39, from ../../source/dft/grid_stream.h:34, from SCF_general.h:35, from SCF_restricted.h:32, from SCF_restricted.cc:30: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = double; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from ../../source/dft/sparse_matrix.h:39, from ../../source/dft/grid_stream.h:34, from SCF_general.h:35, from SCF_restricted.h:32, from SCF_restricted.cc:30: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'Treal mat::EuclTruncationBase::run(Treal) [with Tmatrix = mat::MatrixSymmetric > > > > >; Treal = double]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/basisset -I../../source/dft -I../../source/matrix -I../../source/matrix_wrapper -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -I../../source/densfromf -I../../source/utilities -I../../source/utilities_basic -I../../source/integrals -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o SCF_unrestricted.o SCF_unrestricted.cc In file included from ../../source/matrix/Matrix.h:69, from ../../source/matrix_typedefs.h:41, from ../../source/dft/sparse_matrix.h:43, from ../../source/dft/grid_stream.h:34, from SCF_general.h:35, from SCF_unrestricted.h:32, from SCF_unrestricted.cc:30: ../../source/matrix/sort.h:37:5: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(std::exception){ ^~~~~ In file included from /usr/include/c++/8/vector:69, from ../../source/utilities_basic/molecule.h:33, from SCF_general.h:32, from SCF_unrestricted.h:32, from SCF_unrestricted.cc:30: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from ../../source/dft/sparse_matrix.h:39, from ../../source/dft/grid_stream.h:34, from SCF_general.h:35, from SCF_unrestricted.h:32, from SCF_unrestricted.cc:30: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:64, from ../../source/utilities_basic/molecule.h:33, from SCF_general.h:32, from SCF_unrestricted.h:32, from SCF_unrestricted.cc:30: /usr/include/c++/8/bits/stl_vector.h: In member function 'void mat::Matrix::getAllValues(std::vector&, std::vector&, std::vector&) const [with Treal = double]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In member function 'void mat::Matrix::syGetAllValues(std::vector&, std::vector&, std::vector&) const [with Treal = double; Telement = mat::Matrix > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In function 'void get_all_nonzeros(const Tmatrix&, const std::vector&, std::vector&, std::vector&, std::vector&) [with Tmatrix = mat::MatrixSymmetric > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from ../../source/dft/sparse_matrix.h:39, from ../../source/dft/grid_stream.h:34, from SCF_general.h:35, from SCF_unrestricted.h:32, from SCF_unrestricted.cc:30: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = double; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from ../../source/dft/sparse_matrix.h:39, from ../../source/dft/grid_stream.h:34, from SCF_general.h:35, from SCF_unrestricted.h:32, from SCF_unrestricted.cc:30: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'Treal mat::Matrix::frob_squared_thresh(Treal, mat::Matrix*) [with Treal = double; Telement = mat::Matrix > > >]': /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/basisset -I../../source/dft -I../../source/matrix -I../../source/matrix_wrapper -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -I../../source/densfromf -I../../source/utilities -I../../source/utilities_basic -I../../source/integrals -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o SCF_statistics.o SCF_statistics.cc In file included from /usr/include/c++/8/map:60, from SCF_statistics.h:31, from SCF_statistics.cc:31: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, SCF_timer>; _KeyOfValue = std::_Select1st, SCF_timer> >; _Compare = std::less >; _Alloc = std::allocator, SCF_timer> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, SCF_timer>, std::_Select1st, SCF_timer> >, std::less >, std::allocator, SCF_timer> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, SCF_timer> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from SCF_statistics.h:31, from SCF_statistics.cc:31: /usr/include/c++/8/bits/stl_map.h: In member function 'void SCF_statistics::stop_timer(std::__cxx11::string)': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, SCF_timer>, std::_Select1st, SCF_timer> >, std::less >, std::allocator, SCF_timer> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, SCF_timer> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h: In member function 'void SCF_statistics::start_timer(std::__cxx11::string)': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, SCF_timer>, std::_Select1st, SCF_timer> >, std::less >, std::allocator, SCF_timer> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, SCF_timer> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, In file included from /usr/include/c++/8/map:60, from SCF_statistics.h:31, from SCF_statistics.cc:31: /usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple, std::allocator >&>, std::tuple<>}; _Key = std::__cxx11::basic_string; _Val = std::pair, double>; _KeyOfValue = std::_Select1st, double> >; _Compare = std::less >; _Alloc = std::allocator, double> >]': /usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, double>, std::_Select1st, double> >, std::less >, std::allocator, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, double> >'} changed in GCC 7.1 _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>:: ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/map:61, from SCF_statistics.h:31, from SCF_statistics.cc:31: /usr/include/c++/8/bits/stl_map.h: In member function 'void SCF_statistics::add_value(std::__cxx11::string, double)': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, double>, std::_Select1st, double> >, std::less >, std::allocator, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, double> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, /usr/include/c++/8/bits/stl_map.h: In member function 'void SCF_statistics::add_values(SCF_statistics::ValueMap&)': /usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree, std::pair, double>, std::_Select1st, double> >, std::less >, std::allocator, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator, double> >'} changed in GCC 7.1 __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct, c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/basisset -I../../source/dft -I../../source/matrix -I../../source/matrix_wrapper -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -I../../source/densfromf -I../../source/utilities -I../../source/utilities_basic -I../../source/integrals -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o scf.o scf.cc In file included from ../../source/matrix/Matrix.h:69, from ../../source/matrix_typedefs.h:41, from scf.h:37, from scf.cc:34: ../../source/matrix/sort.h:37:5: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(std::exception){ ^~~~~ rm -f libscf.a ar cru libscf.a diis_general.o diis_restricted.o diis_unrestricted.o scf_utils.o SCF_general.o SCF_restricted.o SCF_unrestricted.o SCF_statistics.o scf.o ar: `u' modifier ignored since `D' is the default (see `U') ranlib libscf.a make[4]: Leaving directory '/build/ergo-3.5/source/scf' Making all in . make[4]: Entering directory '/build/ergo-3.5/source' cc -DHAVE_CONFIG_H -I. -I../source/utilities -I../source/utilities_basic -I../source/dft -I../source/basisset -I../source/integrals -I../source/electron_dynamics -I../source/scf -I../source/ci -I../source/densfromf -I../source/matrix_wrapper/file_tools/src -I../source/matrix -I../source/matrix/template_lapack/blas -I../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o ergo_input_processor.o ergo_input_processor.c cc -DHAVE_CONFIG_H -I. -I../source/utilities -I../source/utilities_basic -I../source/dft -I../source/basisset -I../source/integrals -I../source/electron_dynamics -I../source/scf -I../source/ci -I../source/densfromf -I../source/matrix_wrapper/file_tools/src -I../source/matrix -I../source/matrix/template_lapack/blas -I../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o ergo_input_parser.o ergo_input_parser.c c++ -DHAVE_CONFIG_H -I. -I../source/utilities -I../source/utilities_basic -I../source/dft -I../source/basisset -I../source/integrals -I../source/electron_dynamics -I../source/scf -I../source/ci -I../source/densfromf -I../source/matrix_wrapper/file_tools/src -I../source/matrix -I../source/matrix/template_lapack/blas -I../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o ergo_scripted.o ergo_scripted.cc In file included from ../source/matrix/Matrix.h:69, from ./matrix_typedefs.h:41, from ../source/dft/sparse_matrix.h:43, from ../source/dft/grid_stream.h:34, from ../source/dft/grid_reader.h:38, from ergo_scripted.cc:63: ../source/matrix/sort.h:37:5: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(std::exception){ ^~~~~ In file included from /usr/include/c++/8/vector:69, from ../source/utilities_basic/molecule.h:33, from ../source/basisset/basisinfo.h:38, from ../source/utilities/density_description_file.h:32, from ergo_scripted.cc:61: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from ../source/utilities_basic/molecule.h:33, from ../source/basisset/basisinfo.h:38, from ../source/utilities/density_description_file.h:32, from ergo_scripted.cc:61: /usr/include/c++/8/bits/stl_vector.h: In member function 'void mat::Matrix::getAllValues(std::vector&, std::vector&, std::vector&) const [with Treal = double]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In member function 'void mat::MatrixSymmetric::fullMatrix(std::vector&, const std::vector&, const std::vector&) const [with Treal = double; Tmatrix = mat::Matrix > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ c++ -DHAVE_CONFIG_H -I. -I../source/utilities -I../source/utilities_basic -I../source/dft -I../source/basisset -I../source/integrals -I../source/electron_dynamics -I../source/scf -I../source/ci -I../source/densfromf -I../source/matrix_wrapper/file_tools/src -I../source/matrix -I../source/matrix/template_lapack/blas -I../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o slr.o slr.cc c++ -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -fopenmp -Wl,-z,relro -Wl,--as-needed -o ergo ergo_input_processor.o ergo_input_parser.o ergo_scripted.o slr.o ../source/scf/libscf.a ../source/ci/libci.a ../source/densfromf/libdensfromf.a ../source/dft/libdft.a ../source/utilities/libutilities.a ../source/utilities_basic/libutilities_basic.a ../source/integrals/libintegrals.a ../source/electron_dynamics/libelectron_dynamics.a ../source/matrix/libmat.a ../source/matrix/template_lapack/blas/libtemplateblas.a ../source/matrix/template_lapack/lapack/libtemplatelapack.a ../source/basisset/libbasisset.a ../source/densfromf/recursive_expansion/src/libpurification.a ../source/matrix_wrapper/file_tools/src/libfiles.a -llapack -lpthread -lm -lf77blas -latlas c++ -DHAVE_CONFIG_H -I. -I../source/utilities -I../source/utilities_basic -I../source/dft -I../source/basisset -I../source/integrals -I../source/electron_dynamics -I../source/scf -I../source/ci -I../source/densfromf -I../source/matrix_wrapper/file_tools/src -I../source/matrix -I../source/matrix/template_lapack/blas -I../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o fermi_contact.o fermi_contact.cc In file included from ../source/matrix/Matrix.h:69, from fermi_contact.cc:41: ../source/matrix/sort.h:37:5: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(std::exception){ ^~~~~ c++ -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -fopenmp -Wl,-z,relro -Wl,--as-needed -o fermi_contact fermi_contact.o ../source/dft/libdft.a ../source/utilities/libutilities.a ../source/matrix/libmat.a ../source/matrix/template_lapack/blas/libtemplateblas.a ../source/matrix/template_lapack/lapack/libtemplatelapack.a ../source/basisset/libbasisset.a ../source/integrals/libintegrals.a ../source/utilities_basic/libutilities_basic.a -llapack -lpthread -lm -lf77blas -latlas c++ -DHAVE_CONFIG_H -I. -I../source/utilities -I../source/utilities_basic -I../source/dft -I../source/basisset -I../source/integrals -I../source/electron_dynamics -I../source/scf -I../source/ci -I../source/densfromf -I../source/matrix_wrapper/file_tools/src -I../source/matrix -I../source/matrix/template_lapack/blas -I../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o bin2m.o bin2m.cc c++ -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -fopenmp -Wl,-z,relro -Wl,--as-needed -o bin2m bin2m.o ../source/utilities/libutilities.a ../source/basisset/libbasisset.a ../source/integrals/libintegrals.a ../source/utilities_basic/libutilities_basic.a -llapack -lpthread -lm -lf77blas -latlas make[4]: Leaving directory '/build/ergo-3.5/source' Making all in tddft make[4]: Entering directory '/build/ergo-3.5/source/tddft' c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/basisset -I../../source/dft -I../../source/integrals -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -I../../source/scf -I../../source/utilities -I../../source/utilities_basic -I../../source/densfromf -I../../source/matrix_wrapper/file_tools/src -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o tddft.o tddft.cc In file included from ../../source/matrix/Matrix.h:69, from ../../source/matrix_typedefs.h:41, from ../../source/dft/dft_common.h:43, from tddft.cc:33: ../../source/matrix/sort.h:37:5: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(std::exception){ ^~~~~ c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/basisset -I../../source/dft -I../../source/integrals -I../../source/matrix -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -I../../source/scf -I../../source/utilities -I../../source/utilities_basic -I../../source/densfromf -I../../source/matrix_wrapper/file_tools/src -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o tddft_test.o tddft_test.cc In file included from ../../source/matrix/Matrix.h:69, from tddft_test.cc:47: ../../source/matrix/sort.h:37:5: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(std::exception){ ^~~~~ c++ -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -fopenmp -Wl,-z,relro -Wl,--as-needed -o tddft_test tddft.o tddft_test.o ../../source/scf/libscf.a ../../source/dft/libdft.a ../../source/densfromf/libdensfromf.a ../../source/utilities/libutilities.a ../../source/utilities_basic/libutilities_basic.a ../../source/integrals/libintegrals.a ../../source/matrix/libmat.a ../../source/matrix/template_lapack/blas/libtemplateblas.a ../../source/matrix/template_lapack/lapack/libtemplatelapack.a ../../source/basisset/libbasisset.a ../../source/densfromf/recursive_expansion/src/libpurification.a ../../source/matrix_wrapper/file_tools/src/libfiles.a -llapack -lpthread -lm -lf77blas -latlas make[4]: Leaving directory '/build/ergo-3.5/source/tddft' Making all in test make[4]: Entering directory '/build/ergo-3.5/source/test' c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/basisset -I../../source/dft -I../../source/scf -I../../source/densfromf -I../../source/densfromf/recursive_expansion/src -I../../source/matrix_wrapper/file_tools/src/ -I../../source/matrix_wrapper/ErgoMatrix/src/ -I../../source/integrals -I../../source/matrix -I../../source/utilities -I../../source/utilities_basic -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o basicmath_test.o basicmath_test.cc c++ -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -fopenmp -Wl,-z,relro -Wl,--as-needed -o basicmath_test basicmath_test.o ../../source/matrix/libmat.a ../../source/matrix/template_lapack/blas/libtemplateblas.a -llapack -lpthread -lm -lf77blas -latlas c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/basisset -I../../source/dft -I../../source/scf -I../../source/densfromf -I../../source/densfromf/recursive_expansion/src -I../../source/matrix_wrapper/file_tools/src/ -I../../source/matrix_wrapper/ErgoMatrix/src/ -I../../source/integrals -I../../source/matrix -I../../source/utilities -I../../source/utilities_basic -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o lapack_test.o lapack_test.cc c++ -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -fopenmp -Wl,-z,relro -Wl,--as-needed -o lapack_test lapack_test.o ../../source/matrix/libmat.a ../../source/matrix/template_lapack/blas/libtemplateblas.a ../../source/matrix/template_lapack/lapack/libtemplatelapack.a -llapack -lpthread -lm -lf77blas -latlas c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/basisset -I../../source/dft -I../../source/scf -I../../source/densfromf -I../../source/densfromf/recursive_expansion/src -I../../source/matrix_wrapper/file_tools/src/ -I../../source/matrix_wrapper/ErgoMatrix/src/ -I../../source/integrals -I../../source/matrix -I../../source/utilities -I../../source/utilities_basic -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o grid_test.o grid_test.cc In file included from ../../source/matrix/Matrix.h:69, from ../../source/matrix_typedefs.h:41, from ../../source/dft/dft_common.h:43, from grid_test.cc:40: ../../source/matrix/sort.h:37:5: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(std::exception){ ^~~~~ c++ -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -fopenmp -Wl,-z,relro -Wl,--as-needed -o grid_test grid_test.o ../../source/dft/libdft.a ../../source/basisset/libbasisset.a ../../source/integrals/libintegrals.a ../../source/utilities/libutilities.a ../../source/utilities_basic/libutilities_basic.a ../../source/matrix/template_lapack/blas/libtemplateblas.a ../../source/matrix/template_lapack/lapack/libtemplatelapack.a ../../source/matrix/libmat.a -llapack -lpthread -lm -lf77blas -latlas c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/basisset -I../../source/dft -I../../source/scf -I../../source/densfromf -I../../source/densfromf/recursive_expansion/src -I../../source/matrix_wrapper/file_tools/src/ -I../../source/matrix_wrapper/ErgoMatrix/src/ -I../../source/integrals -I../../source/matrix -I../../source/utilities -I../../source/utilities_basic -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o stream_test.o stream_test.cc In file included from ../../source/matrix/Matrix.h:69, from ../../source/matrix_typedefs.h:41, from ../../source/dft/sparse_matrix.h:43, from ../../source/dft/grid_stream.h:34, from ../../source/dft/grid_reader.h:38, from stream_test.cc:36: ../../source/matrix/sort.h:37:5: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(std::exception){ ^~~~~ c++ -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -fopenmp -Wl,-z,relro -Wl,--as-needed -o stream_test stream_test.o ../../source/dft/libdft.a ../../source/basisset/libbasisset.a ../../source/integrals/libintegrals.a ../../source/utilities_basic/libutilities_basic.a ../../source/matrix/libmat.a -llapack -lpthread -lm -lf77blas -latlas c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/basisset -I../../source/dft -I../../source/scf -I../../source/densfromf -I../../source/densfromf/recursive_expansion/src -I../../source/matrix_wrapper/file_tools/src/ -I../../source/matrix_wrapper/ErgoMatrix/src/ -I../../source/integrals -I../../source/matrix -I../../source/utilities -I../../source/utilities_basic -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o tmat_test.o tmat_test.cc c++ -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -fopenmp -Wl,-z,relro -Wl,--as-needed -o tmat_test tmat_test.o ../../source/basisset/libbasisset.a ../../source/integrals/libintegrals.a ../../source/utilities_basic/libutilities_basic.a -llapack -lpthread -lm -lf77blas -latlas c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/basisset -I../../source/dft -I../../source/scf -I../../source/densfromf -I../../source/densfromf/recursive_expansion/src -I../../source/matrix_wrapper/file_tools/src/ -I../../source/matrix_wrapper/ErgoMatrix/src/ -I../../source/integrals -I../../source/matrix -I../../source/utilities -I../../source/utilities_basic -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o vmat_test.o vmat_test.cc In file included from ../../source/matrix/Matrix.h:69, from ../../source/matrix_typedefs.h:41, from vmat_test.cc:41: ../../source/matrix/sort.h:37:5: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(std::exception){ ^~~~~ In file included from /usr/include/c++/8/vector:69, from ../../source/utilities_basic/molecule.h:33, from ../../source/basisset/basisinfo.h:38, from ../../source/integrals/integrals_1el_potential.h:32, from vmat_test.cc:38: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from ../../source/utilities_basic/molecule.h:33, from ../../source/basisset/basisinfo.h:38, from ../../source/integrals/integrals_1el_potential.h:32, from vmat_test.cc:38: /usr/include/c++/8/bits/stl_vector.h: In member function 'void mat::Matrix::getAllValues(std::vector&, std::vector&, std::vector&) const [with Treal = double]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In member function 'void mat::MatrixSymmetric::fullMatrix(std::vector&, const std::vector&, const std::vector&) const [with Treal = double; Tmatrix = mat::Matrix > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ c++ -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -fopenmp -Wl,-z,relro -Wl,--as-needed -o vmat_test vmat_test.o ../../source/basisset/libbasisset.a ../../source/utilities/libutilities.a ../../source/integrals/libintegrals.a ../../source/utilities_basic/libutilities_basic.a ../../source/matrix/template_lapack/blas/libtemplateblas.a ../../source/matrix/template_lapack/lapack/libtemplatelapack.a ../../source/matrix/libmat.a -llapack -lpthread -lm -lf77blas -latlas c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/basisset -I../../source/dft -I../../source/scf -I../../source/densfromf -I../../source/densfromf/recursive_expansion/src -I../../source/matrix_wrapper/file_tools/src/ -I../../source/matrix_wrapper/ErgoMatrix/src/ -I../../source/integrals -I../../source/matrix -I../../source/utilities -I../../source/utilities_basic -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o gradient_test.o gradient_test.cc In file included from ../../source/matrix/Matrix.h:69, from ../../source/matrix_typedefs.h:41, from gradient_test.cc:34: ../../source/matrix/sort.h:37:5: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(std::exception){ ^~~~~ In file included from /usr/include/c++/8/vector:69, from ../../source/utilities_basic/molecule.h:33, from ../../source/basisset/basisinfo.h:38, from ../../source/integrals/integrals_1el_potential.h:32, from gradient_test.cc:31: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from ../../source/utilities_basic/molecule.h:33, from ../../source/basisset/basisinfo.h:38, from ../../source/integrals/integrals_1el_potential.h:32, from gradient_test.cc:31: /usr/include/c++/8/bits/stl_vector.h: In member function 'void mat::Matrix::getAllValues(std::vector&, std::vector&, std::vector&) const [with Treal = double]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In member function 'void mat::MatrixSymmetric::fullMatrix(std::vector&, const std::vector&, const std::vector&) const [with Treal = double; Tmatrix = mat::Matrix > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ c++ -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -fopenmp -Wl,-z,relro -Wl,--as-needed -o gradient_test gradient_test.o ../../source/basisset/libbasisset.a ../../source/utilities/libutilities.a ../../source/integrals/libintegrals.a ../../source/utilities_basic/libutilities_basic.a ../../source/matrix/template_lapack/blas/libtemplateblas.a ../../source/matrix/template_lapack/lapack/libtemplatelapack.a ../../source/matrix/libmat.a -llapack -lpthread -lm -lf77blas -latlas c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/basisset -I../../source/dft -I../../source/scf -I../../source/densfromf -I../../source/densfromf/recursive_expansion/src -I../../source/matrix_wrapper/file_tools/src/ -I../../source/matrix_wrapper/ErgoMatrix/src/ -I../../source/integrals -I../../source/matrix -I../../source/utilities -I../../source/utilities_basic -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o mat_thread_test.o mat_thread_test.cc In file included from ../../source/matrix/Matrix.h:69, from ../../source/matrix_typedefs.h:41, from mat_thread_test.cc:33: ../../source/matrix/sort.h:37:5: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(std::exception){ ^~~~~ In file included from /usr/include/c++/8/algorithm:62, from ../../source/matrix/Matrix.h:64, from ../../source/matrix_typedefs.h:41, from mat_thread_test.cc:33: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from ../../source/matrix/matInclude.h:40, from ../../source/matrix/MatrixHierarchicBase.h:41, from ../../source/matrix/Matrix.h:66, from ../../source/matrix_typedefs.h:41, from mat_thread_test.cc:33: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/vector.tcc: In function 'void mat::Matrix::getFrobSqLowestLevel(std::vector&) const [with Treal = double; Telement = mat::Matrix]': /usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), std::forward<_Args>(__args)...); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from ../../source/matrix/Matrix.h:64, from ../../source/matrix_typedefs.h:41, from mat_thread_test.cc:33: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = double; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from ../../source/matrix/Matrix.h:64, from ../../source/matrix_typedefs.h:41, from mat_thread_test.cc:33: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1963:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __sort(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~ /usr/include/c++/8/bits/stl_algo.h:1963:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In static member function 'static void mat::Matrix::syInch(const mat::Matrix&, mat::Matrix&, Treal, mat::side, mat::inchversion) [with Treal = double; Telement = mat::Matrix >]': /usr/include/c++/8/bits/stl_algo.h:4834:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_less_iter()); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ c++ -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -fopenmp -Wl,-z,relro -Wl,--as-needed -o mat_thread_test mat_thread_test.o ../../source/utilities/libutilities.a ../../source/utilities_basic/libutilities_basic.a ../../source/matrix/template_lapack/blas/libtemplateblas.a ../../source/matrix/template_lapack/lapack/libtemplatelapack.a ../../source/matrix/libmat.a -llapack -lpthread -lm -lf77blas -latlas c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/basisset -I../../source/dft -I../../source/scf -I../../source/densfromf -I../../source/densfromf/recursive_expansion/src -I../../source/matrix_wrapper/file_tools/src/ -I../../source/matrix_wrapper/ErgoMatrix/src/ -I../../source/integrals -I../../source/matrix -I../../source/utilities -I../../source/utilities_basic -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o mat_performance_test.o mat_performance_test.cc In file included from ../../source/matrix/Matrix.h:69, from ../../source/matrix_typedefs.h:41, from mat_performance_test.cc:33: ../../source/matrix/sort.h:37:5: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(std::exception){ ^~~~~ In file included from /usr/include/c++/8/vector:69, from ../../source/matrix/matInclude.h:40, from ../../source/matrix/MatrixHierarchicBase.h:41, from ../../source/matrix/Matrix.h:66, from ../../source/matrix_typedefs.h:41, from mat_performance_test.cc:33: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from ../../source/matrix/matInclude.h:40, from ../../source/matrix/MatrixHierarchicBase.h:41, from ../../source/matrix/Matrix.h:66, from ../../source/matrix_typedefs.h:41, from mat_performance_test.cc:33: /usr/include/c++/8/bits/stl_vector.h: In member function 'void mat::Matrix::getValues(const std::vector&, const std::vector&, std::vector&) const [with Treal = double; Telement = mat::Matrix > > >]': /usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_fill_insert(end(), __new_size - size(), __x); ^~~~~~~~~~~~~~ c++ -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -fopenmp -Wl,-z,relro -Wl,--as-needed -o mat_performance_test mat_performance_test.o ../../source/utilities/libutilities.a ../../source/utilities_basic/libutilities_basic.a ../../source/matrix/template_lapack/blas/libtemplateblas.a ../../source/matrix/template_lapack/lapack/libtemplatelapack.a ../../source/matrix/libmat.a -llapack -lpthread -lm -lf77blas -latlas c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/basisset -I../../source/dft -I../../source/scf -I../../source/densfromf -I../../source/densfromf/recursive_expansion/src -I../../source/matrix_wrapper/file_tools/src/ -I../../source/matrix_wrapper/ErgoMatrix/src/ -I../../source/integrals -I../../source/matrix -I../../source/utilities -I../../source/utilities_basic -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o jmat_test.o jmat_test.cc In file included from ../../source/matrix/Matrix.h:69, from ../../source/matrix_typedefs.h:41, from ../../source/utilities/matrix_utilities.h:32, from jmat_test.cc:37: ../../source/matrix/sort.h:37:5: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(std::exception){ ^~~~~ c++ -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -fopenmp -Wl,-z,relro -Wl,--as-needed -o jmat_test jmat_test.o ../../source/scf/libscf.a ../../source/dft/libdft.a ../../source/basisset/libbasisset.a ../../source/utilities/libutilities.a ../../source/integrals/libintegrals.a ../../source/utilities_basic/libutilities_basic.a ../../source/matrix/template_lapack/blas/libtemplateblas.a ../../source/matrix/template_lapack/lapack/libtemplatelapack.a ../../source/matrix/libmat.a -llapack -lpthread -lm -lf77blas -latlas c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/basisset -I../../source/dft -I../../source/scf -I../../source/densfromf -I../../source/densfromf/recursive_expansion/src -I../../source/matrix_wrapper/file_tools/src/ -I../../source/matrix_wrapper/ErgoMatrix/src/ -I../../source/integrals -I../../source/matrix -I../../source/utilities -I../../source/utilities_basic -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o jmat_extrapolate_test.o jmat_extrapolate_test.cc In file included from ../../source/matrix/Matrix.h:69, from ../../source/matrix_typedefs.h:41, from ../../source/scf/scf_utils.h:35, from jmat_extrapolate_test.cc:38: ../../source/matrix/sort.h:37:5: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(std::exception){ ^~~~~ c++ -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -fopenmp -Wl,-z,relro -Wl,--as-needed -o jmat_extrapolate_test jmat_extrapolate_test.o ../../source/scf/libscf.a ../../source/dft/libdft.a ../../source/basisset/libbasisset.a ../../source/utilities/libutilities.a ../../source/integrals/libintegrals.a ../../source/utilities_basic/libutilities_basic.a ../../source/matrix/template_lapack/blas/libtemplateblas.a ../../source/matrix/template_lapack/lapack/libtemplatelapack.a ../../source/matrix/libmat.a -llapack -lpthread -lm -lf77blas -latlas c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/basisset -I../../source/dft -I../../source/scf -I../../source/densfromf -I../../source/densfromf/recursive_expansion/src -I../../source/matrix_wrapper/file_tools/src/ -I../../source/matrix_wrapper/ErgoMatrix/src/ -I../../source/integrals -I../../source/matrix -I../../source/utilities -I../../source/utilities_basic -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o kmat_test.o kmat_test.cc In file included from ../../source/matrix/Matrix.h:69, from ../../source/matrix_typedefs.h:41, from ../../source/utilities/matrix_utilities.h:32, from kmat_test.cc:37: ../../source/matrix/sort.h:37:5: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(std::exception){ ^~~~~ c++ -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -fopenmp -Wl,-z,relro -Wl,--as-needed -o kmat_test kmat_test.o ../../source/scf/libscf.a ../../source/dft/libdft.a ../../source/basisset/libbasisset.a ../../source/utilities/libutilities.a ../../source/integrals/libintegrals.a ../../source/utilities_basic/libutilities_basic.a ../../source/matrix/template_lapack/blas/libtemplateblas.a ../../source/matrix/template_lapack/lapack/libtemplatelapack.a ../../source/matrix/libmat.a -llapack -lpthread -lm -lf77blas -latlas c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/basisset -I../../source/dft -I../../source/scf -I../../source/densfromf -I../../source/densfromf/recursive_expansion/src -I../../source/matrix_wrapper/file_tools/src/ -I../../source/matrix_wrapper/ErgoMatrix/src/ -I../../source/integrals -I../../source/matrix -I../../source/utilities -I../../source/utilities_basic -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o kmat_symm_test.o kmat_symm_test.cc In file included from ../../source/matrix/Matrix.h:69, from ../../source/matrix_typedefs.h:41, from ../../source/utilities/matrix_utilities.h:32, from kmat_symm_test.cc:38: ../../source/matrix/sort.h:37:5: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(std::exception){ ^~~~~ In file included from /usr/include/c++/8/vector:69, from kmat_symm_test.cc:36: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from kmat_symm_test.cc:36: /usr/include/c++/8/bits/stl_vector.h: In member function 'void mat::Matrix::getAllValues(std::vector&, std::vector&, std::vector&) const [with Treal = double]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In member function 'void mat::MatrixSymmetric::get_all_values(std::vector&, std::vector&, std::vector&, const std::vector&, const std::vector&) const [with Treal = double; Tmatrix = mat::Matrix > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ c++ -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -fopenmp -Wl,-z,relro -Wl,--as-needed -o kmat_symm_test kmat_symm_test.o ../../source/scf/libscf.a ../../source/dft/libdft.a ../../source/basisset/libbasisset.a ../../source/utilities/libutilities.a ../../source/integrals/libintegrals.a ../../source/utilities_basic/libutilities_basic.a ../../source/matrix/template_lapack/blas/libtemplateblas.a ../../source/matrix/template_lapack/lapack/libtemplatelapack.a ../../source/matrix/libmat.a -llapack -lpthread -lm -lf77blas -latlas c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/basisset -I../../source/dft -I../../source/scf -I../../source/densfromf -I../../source/densfromf/recursive_expansion/src -I../../source/matrix_wrapper/file_tools/src/ -I../../source/matrix_wrapper/ErgoMatrix/src/ -I../../source/integrals -I../../source/matrix -I../../source/utilities -I../../source/utilities_basic -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o kmat_nosymm_test.o kmat_nosymm_test.cc In file included from ../../source/matrix/Matrix.h:69, from ../../source/matrix_typedefs.h:41, from ../../source/utilities/matrix_utilities.h:32, from kmat_nosymm_test.cc:38: ../../source/matrix/sort.h:37:5: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(std::exception){ ^~~~~ c++ -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -fopenmp -Wl,-z,relro -Wl,--as-needed -o kmat_nosymm_test kmat_nosymm_test.o ../../source/scf/libscf.a ../../source/dft/libdft.a ../../source/basisset/libbasisset.a ../../source/utilities/libutilities.a ../../source/integrals/libintegrals.a ../../source/utilities_basic/libutilities_basic.a ../../source/matrix/template_lapack/blas/libtemplateblas.a ../../source/matrix/template_lapack/lapack/libtemplatelapack.a ../../source/matrix/libmat.a -llapack -lpthread -lm -lf77blas -latlas c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/basisset -I../../source/dft -I../../source/scf -I../../source/densfromf -I../../source/densfromf/recursive_expansion/src -I../../source/matrix_wrapper/file_tools/src/ -I../../source/matrix_wrapper/ErgoMatrix/src/ -I../../source/integrals -I../../source/matrix -I../../source/utilities -I../../source/utilities_basic -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o naive_response_test.o naive_response_test.cc In file included from ../../source/matrix/Matrix.h:69, from ../../source/matrix_typedefs.h:41, from ../../source/utilities/matrix_utilities.h:32, from naive_response_test.cc:35: ../../source/matrix/sort.h:37:5: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(std::exception){ ^~~~~ In file included from /usr/include/c++/8/algorithm:62, from ../../source/matrix/Matrix.h:64, from ../../source/matrix_typedefs.h:41, from ../../source/utilities/matrix_utilities.h:32, from naive_response_test.cc:35: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from ../../source/matrix/Matrix.h:64, from ../../source/matrix_typedefs.h:41, from ../../source/utilities/matrix_utilities.h:32, from naive_response_test.cc:35: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = double; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from ../../source/matrix/Matrix.h:64, from ../../source/matrix_typedefs.h:41, from ../../source/utilities/matrix_utilities.h:32, from naive_response_test.cc:35: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1963:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __sort(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~ /usr/include/c++/8/bits/stl_algo.h:1963:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In static member function 'static void mat::Matrix::syInch(const mat::Matrix&, mat::Matrix&, Treal, mat::side, mat::inchversion) [with Treal = double; Telement = mat::Matrix >]': /usr/include/c++/8/bits/stl_algo.h:4834:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_less_iter()); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from ../../source/utilities_basic/molecule.h:33, from ../../source/basisset/basisinfo.h:38, from naive_response_test.cc:33: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from ../../source/utilities_basic/molecule.h:33, from ../../source/basisset/basisinfo.h:38, from naive_response_test.cc:33: /usr/include/c++/8/bits/stl_vector.h: In member function 'void mat::Matrix::getAllValues(std::vector&, std::vector&, std::vector&) const [with Treal = double]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h: In member function 'void mat::MatrixSymmetric::fullMatrix(std::vector&, const std::vector&, const std::vector&) const [with Treal = double; Tmatrix = mat::Matrix > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from ../../source/matrix/Matrix.h:64, from ../../source/matrix_typedefs.h:41, from ../../source/utilities/matrix_utilities.h:32, from naive_response_test.cc:35: /usr/include/c++/8/bits/stl_algo.h: In function 'int main(int, char**)': /usr/include/c++/8/bits/stl_algo.h:4834:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_less_iter()); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ c++ -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -fopenmp -Wl,-z,relro -Wl,--as-needed -o naive_response_test naive_response_test.o ../../source/densfromf/libdensfromf.a ../../source/densfromf/recursive_expansion/src/libpurification.a ../../source/matrix_wrapper/file_tools/src/libfiles.a ../../source/basisset/libbasisset.a ../../source/utilities/libutilities.a ../../source/integrals/libintegrals.a ../../source/utilities_basic/libutilities_basic.a ../../source/matrix/template_lapack/blas/libtemplateblas.a ../../source/matrix/template_lapack/lapack/libtemplatelapack.a ../../source/matrix/libmat.a -llapack -lpthread -lm -lf77blas -latlas c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/basisset -I../../source/dft -I../../source/scf -I../../source/densfromf -I../../source/densfromf/recursive_expansion/src -I../../source/matrix_wrapper/file_tools/src/ -I../../source/matrix_wrapper/ErgoMatrix/src/ -I../../source/integrals -I../../source/matrix -I../../source/utilities -I../../source/utilities_basic -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o explicit_integral_test.o explicit_integral_test.cc c++ -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -fopenmp -Wl,-z,relro -Wl,--as-needed -o explicit_integral_test explicit_integral_test.o ../../source/basisset/libbasisset.a ../../source/utilities/libutilities.a ../../source/integrals/libintegrals.a ../../source/utilities_basic/libutilities_basic.a -llapack -lpthread -lm -lf77blas -latlas c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/basisset -I../../source/dft -I../../source/scf -I../../source/densfromf -I../../source/densfromf/recursive_expansion/src -I../../source/matrix_wrapper/file_tools/src/ -I../../source/matrix_wrapper/ErgoMatrix/src/ -I../../source/integrals -I../../source/matrix -I../../source/utilities -I../../source/utilities_basic -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o xcmat_test.o xcmat_test.cc In file included from ../../source/matrix/Matrix.h:69, from ../../source/matrix_typedefs.h:41, from ../../source/dft/sparse_matrix.h:43, from ../../source/dft/grid_stream.h:34, from ../../source/dft/grid_reader.h:38, from xcmat_test.cc:44: ../../source/matrix/sort.h:37:5: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(std::exception){ ^~~~~ c++ -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -fopenmp -Wl,-z,relro -Wl,--as-needed -o xcmat_test xcmat_test.o ../../source/dft/libdft.a ../../source/basisset/libbasisset.a ../../source/utilities/libutilities.a ../../source/integrals/libintegrals.a ../../source/utilities_basic/libutilities_basic.a ../../source/matrix/template_lapack/blas/libtemplateblas.a ../../source/matrix/template_lapack/lapack/libtemplatelapack.a ../../source/matrix/libmat.a -llapack -lpthread -lm -lf77blas -latlas c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/basisset -I../../source/dft -I../../source/scf -I../../source/densfromf -I../../source/densfromf/recursive_expansion/src -I../../source/matrix_wrapper/file_tools/src/ -I../../source/matrix_wrapper/ErgoMatrix/src/ -I../../source/integrals -I../../source/matrix -I../../source/utilities -I../../source/utilities_basic -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o xcmat_sparse_test.o xcmat_sparse_test.cc In file included from ../../source/matrix/Matrix.h:69, from ../../source/matrix_typedefs.h:41, from ../../source/dft/dft_common.h:43, from xcmat_sparse_test.cc:41: ../../source/matrix/sort.h:37:5: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(std::exception){ ^~~~~ In file included from /usr/include/c++/8/vector:69, from xcmat_sparse_test.cc:36: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from xcmat_sparse_test.cc:36: /usr/include/c++/8/bits/stl_vector.h: In member function 'void mat::Matrix::getValues(const std::vector&, const std::vector&, std::vector&) const [with Treal = double; Telement = mat::Matrix > > >]': /usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_fill_insert(end(), __new_size - size(), __x); ^~~~~~~~~~~~~~ c++ -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -fopenmp -Wl,-z,relro -Wl,--as-needed -o xcmat_sparse_test xcmat_sparse_test.o ../../source/dft/libdft.a ../../source/basisset/libbasisset.a ../../source/utilities/libutilities.a ../../source/integrals/libintegrals.a ../../source/utilities_basic/libutilities_basic.a ../../source/matrix/template_lapack/blas/libtemplateblas.a ../../source/matrix/template_lapack/lapack/libtemplatelapack.a ../../source/matrix/libmat.a -llapack -lpthread -lm -lf77blas -latlas c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/basisset -I../../source/dft -I../../source/scf -I../../source/densfromf -I../../source/densfromf/recursive_expansion/src -I../../source/matrix_wrapper/file_tools/src/ -I../../source/matrix_wrapper/ErgoMatrix/src/ -I../../source/integrals -I../../source/matrix -I../../source/utilities -I../../source/utilities_basic -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o xcmat_nan_inf_test.o xcmat_nan_inf_test.cc In file included from ../../source/matrix/Matrix.h:69, from ../../source/matrix_typedefs.h:41, from ../../source/dft/sparse_matrix.h:43, from ../../source/dft/grid_stream.h:34, from ../../source/dft/grid_reader.h:38, from xcmat_nan_inf_test.cc:40: ../../source/matrix/sort.h:37:5: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(std::exception){ ^~~~~ c++ -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -fopenmp -Wl,-z,relro -Wl,--as-needed -o xcmat_nan_inf_test xcmat_nan_inf_test.o ../../source/dft/libdft.a ../../source/basisset/libbasisset.a ../../source/utilities/libutilities.a ../../source/integrals/libintegrals.a ../../source/utilities_basic/libutilities_basic.a ../../source/matrix/template_lapack/blas/libtemplateblas.a ../../source/matrix/template_lapack/lapack/libtemplatelapack.a ../../source/matrix/libmat.a -llapack -lpthread -lm -lf77blas -latlas c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/basisset -I../../source/dft -I../../source/scf -I../../source/densfromf -I../../source/densfromf/recursive_expansion/src -I../../source/matrix_wrapper/file_tools/src/ -I../../source/matrix_wrapper/ErgoMatrix/src/ -I../../source/integrals -I../../source/matrix -I../../source/utilities -I../../source/utilities_basic -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o matmem_test.o matmem_test.cc In file included from ../../source/matrix/Matrix.h:69, from ../../source/matrix_typedefs.h:41, from ../../source/utilities/matrix_utilities.h:32, from matmem_test.cc:38: ../../source/matrix/sort.h:37:5: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(std::exception){ ^~~~~ c++ -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -fopenmp -Wl,-z,relro -Wl,--as-needed -o matmem_test matmem_test.o ../../source/scf/libscf.a ../../source/basisset/libbasisset.a ../../source/utilities/libutilities.a ../../source/integrals/libintegrals.a ../../source/utilities_basic/libutilities_basic.a ../../source/matrix/template_lapack/blas/libtemplateblas.a ../../source/matrix/template_lapack/lapack/libtemplatelapack.a ../../source/matrix/libmat.a -llapack -lpthread -lm -lf77blas -latlas c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/basisset -I../../source/dft -I../../source/scf -I../../source/densfromf -I../../source/densfromf/recursive_expansion/src -I../../source/matrix_wrapper/file_tools/src/ -I../../source/matrix_wrapper/ErgoMatrix/src/ -I../../source/integrals -I../../source/matrix -I../../source/utilities -I../../source/utilities_basic -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o mmul_simple_test.o mmul_simple_test.cc c++ -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -fopenmp -Wl,-z,relro -Wl,--as-needed -o mmul_simple_test mmul_simple_test.o ../../source/utilities/libutilities.a ../../source/utilities_basic/libutilities_basic.a ../../source/matrix/template_lapack/blas/libtemplateblas.a ../../source/matrix/template_lapack/lapack/libtemplatelapack.a ../../source/matrix/libmat.a -llapack -lpthread -lm -lf77blas -latlas c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/basisset -I../../source/dft -I../../source/scf -I../../source/densfromf -I../../source/densfromf/recursive_expansion/src -I../../source/matrix_wrapper/file_tools/src/ -I../../source/matrix_wrapper/ErgoMatrix/src/ -I../../source/integrals -I../../source/matrix -I../../source/utilities -I../../source/utilities_basic -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o mmul_simple_many_test.o mmul_simple_many_test.cc c++ -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -fopenmp -Wl,-z,relro -Wl,--as-needed -o mmul_simple_many_test mmul_simple_many_test.o ../../source/utilities/libutilities.a ../../source/utilities_basic/libutilities_basic.a ../../source/matrix/template_lapack/blas/libtemplateblas.a ../../source/matrix/template_lapack/lapack/libtemplatelapack.a ../../source/matrix/libmat.a -llapack -lpthread -lm -lf77blas -latlas c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/basisset -I../../source/dft -I../../source/scf -I../../source/densfromf -I../../source/densfromf/recursive_expansion/src -I../../source/matrix_wrapper/file_tools/src/ -I../../source/matrix_wrapper/ErgoMatrix/src/ -I../../source/integrals -I../../source/matrix -I../../source/utilities -I../../source/utilities_basic -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o mmul_rectangular_test.o mmul_rectangular_test.cc c++ -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -fopenmp -Wl,-z,relro -Wl,--as-needed -o mmul_rectangular_test mmul_rectangular_test.o ../../source/utilities/libutilities.a ../../source/utilities_basic/libutilities_basic.a ../../source/matrix/template_lapack/blas/libtemplateblas.a ../../source/matrix/template_lapack/lapack/libtemplatelapack.a ../../source/matrix/libmat.a -llapack -lpthread -lm -lf77blas -latlas c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/basisset -I../../source/dft -I../../source/scf -I../../source/densfromf -I../../source/densfromf/recursive_expansion/src -I../../source/matrix_wrapper/file_tools/src/ -I../../source/matrix_wrapper/ErgoMatrix/src/ -I../../source/integrals -I../../source/matrix -I../../source/utilities -I../../source/utilities_basic -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o recexp_diag_test.o recexp_diag_test.cc In file included from ../../source/matrix/Matrix.h:69, from ../../source/matrix_typedefs.h:41, from ../../source/densfromf/recursive_expansion/src/purification_general.h:38, from ../../source/densfromf/recursive_expansion/src/purification_sp2.h:33, from recexp_diag_test.cc:39: ../../source/matrix/sort.h:37:5: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(std::exception){ ^~~~~ In file included from /usr/include/c++/8/algorithm:62, from ../../source/matrix/Matrix.h:64, from ../../source/matrix_typedefs.h:41, from ../../source/densfromf/recursive_expansion/src/purification_general.h:38, from ../../source/densfromf/recursive_expansion/src/purification_sp2.h:33, from recexp_diag_test.cc:39: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 In file included from /usr/include/c++/8/vector:69, from ../../source/matrix/matInclude.h:40, from ../../source/matrix/MatrixHierarchicBase.h:41, from ../../source/matrix/Matrix.h:66, from ../../source/matrix_typedefs.h:41, from ../../source/densfromf/recursive_expansion/src/purification_general.h:38, from ../../source/densfromf/recursive_expansion/src/purification_sp2.h:33, from recexp_diag_test.cc:39: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const IterationInfo&}; _Tp = IterationInfo; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from ../../source/matrix/Matrix.h:64, from ../../source/matrix_typedefs.h:41, from ../../source/densfromf/recursive_expansion/src/purification_general.h:38, from ../../source/densfromf/recursive_expansion/src/purification_sp2.h:33, from recexp_diag_test.cc:39: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = double; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from ../../source/matrix/Matrix.h:64, from ../../source/matrix_typedefs.h:41, from ../../source/densfromf/recursive_expansion/src/purification_general.h:38, from ../../source/densfromf/recursive_expansion/src/purification_sp2.h:33, from recexp_diag_test.cc:39: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1963:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __sort(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~ /usr/include/c++/8/bits/stl_algo.h:1963:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'int main(int, char**)': /usr/include/c++/8/bits/stl_algo.h:4834:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_less_iter()); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from ../../source/matrix/matInclude.h:40, from ../../source/matrix/MatrixHierarchicBase.h:41, from ../../source/matrix/Matrix.h:66, from ../../source/matrix_typedefs.h:41, from ../../source/densfromf/recursive_expansion/src/purification_general.h:38, from ../../source/densfromf/recursive_expansion/src/purification_sp2.h:33, from recexp_diag_test.cc:39: /usr/include/c++/8/bits/stl_vector.h: In member function 'void PurificationGeneral::purification_process() [with MatrixType = ErgoMatrix > > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from ../../source/matrix/matInclude.h:40, from ../../source/matrix/MatrixHierarchicBase.h:41, from ../../source/matrix/Matrix.h:66, from ../../source/matrix_typedefs.h:41, from ../../source/densfromf/recursive_expansion/src/purification_general.h:38, from ../../source/densfromf/recursive_expansion/src/purification_sp2.h:33, from recexp_diag_test.cc:39: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from ../../source/matrix/matInclude.h:40, from ../../source/matrix/MatrixHierarchicBase.h:41, from ../../source/matrix/Matrix.h:66, from ../../source/matrix_typedefs.h:41, from ../../source/densfromf/recursive_expansion/src/purification_general.h:38, from ../../source/densfromf/recursive_expansion/src/purification_sp2.h:33, from recexp_diag_test.cc:39: /usr/include/c++/8/bits/stl_vector.h: In member function 'void std::vector<_Tp, _Alloc>::resize(std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator]': /usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_fill_insert(end(), __new_size - size(), __x); ^~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from ../../source/matrix/Matrix.h:64, from ../../source/matrix_typedefs.h:41, from ../../source/densfromf/recursive_expansion/src/purification_general.h:38, from ../../source/densfromf/recursive_expansion/src/purification_sp2.h:33, from recexp_diag_test.cc:39: /usr/include/c++/8/bits/stl_algo.h: In member function 'Treal mat::EuclTruncationBase::run(Treal) [with Tmatrix = mat::MatrixSymmetric > > > > >; Treal = double]': /usr/include/c++/8/bits/stl_algo.h:4834:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_less_iter()); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'Treal mat::EuclTruncationBase::run(Treal) [with Tmatrix = mat::MatrixSymmetric > > > >; Treal = double]': /usr/include/c++/8/bits/stl_algo.h:4834:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_less_iter()); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'Treal mat::MatrixSymmetric::thresh(Treal, mat::normType) [with Treal = double; Tmatrix = mat::Matrix > > > >]': /usr/include/c++/8/bits/stl_algo.h:4834:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_less_iter()); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ c++ -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -fopenmp -Wl,-z,relro -Wl,--as-needed -o recexp_diag_test recexp_diag_test.o ../../source/densfromf/libdensfromf.a ../../source/densfromf/recursive_expansion/src/libpurification.a ../../source/matrix_wrapper/file_tools/src/libfiles.a ../../source/utilities_basic/libutilities_basic.a ../../source/matrix/template_lapack/blas/libtemplateblas.a ../../source/matrix/template_lapack/lapack/libtemplatelapack.a ../../source/matrix/libmat.a -llapack -lpthread -lm -lf77blas -latlas c++ -DHAVE_CONFIG_H -I. -I../../source -I../../source -I../../source/basisset -I../../source/dft -I../../source/scf -I../../source/densfromf -I../../source/densfromf/recursive_expansion/src -I../../source/matrix_wrapper/file_tools/src/ -I../../source/matrix_wrapper/ErgoMatrix/src/ -I../../source/integrals -I../../source/matrix -I../../source/utilities -I../../source/utilities_basic -I../../source/matrix/template_lapack/blas -I../../source/matrix/template_lapack/lapack -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -c -o recexp_randsym_test.o recexp_randsym_test.cc In file included from ../../source/matrix/Matrix.h:69, from ../../source/matrix_typedefs.h:41, from ../../source/densfromf/recursive_expansion/src/purification_general.h:38, from ../../source/densfromf/recursive_expansion/src/purification_sp2acc.h:33, from recexp_randsym_test.cc:41: ../../source/matrix/sort.h:37:5: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] throw(std::exception){ ^~~~~ In file included from /usr/include/c++/8/vector:69, from ../../source/matrix/matInclude.h:40, from ../../source/matrix/MatrixHierarchicBase.h:41, from ../../source/matrix/Matrix.h:66, from ../../source/matrix_typedefs.h:41, from ../../source/densfromf/recursive_expansion/src/purification_general.h:38, from ../../source/densfromf/recursive_expansion/src/purification_sp2acc.h:33, from recexp_randsym_test.cc:41: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const IterationInfo&}; _Tp = IterationInfo; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from ../../source/matrix/matInclude.h:40, from ../../source/matrix/MatrixHierarchicBase.h:41, from ../../source/matrix/Matrix.h:66, from ../../source/matrix_typedefs.h:41, from ../../source/densfromf/recursive_expansion/src/purification_general.h:38, from ../../source/densfromf/recursive_expansion/src/purification_sp2acc.h:33, from recexp_randsym_test.cc:41: /usr/include/c++/8/bits/stl_vector.h: In member function 'void PurificationGeneral::purification_process() [with MatrixType = ErgoMatrix > > > > > >]': /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_realloc_insert(end(), __x); ^~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:69, from ../../source/matrix/matInclude.h:40, from ../../source/matrix/MatrixHierarchicBase.h:41, from ../../source/matrix/Matrix.h:66, from ../../source/matrix_typedefs.h:41, from ../../source/densfromf/recursive_expansion/src/purification_general.h:38, from ../../source/densfromf/recursive_expansion/src/purification_sp2acc.h:33, from recexp_randsym_test.cc:41: /usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator]': /usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector::iterator' {aka '__gnu_cxx::__normal_iterator >'} changed in GCC 7.1 vector<_Tp, _Alloc>:: ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/8/vector:64, from ../../source/matrix/matInclude.h:40, from ../../source/matrix/MatrixHierarchicBase.h:41, from ../../source/matrix/Matrix.h:66, from ../../source/matrix_typedefs.h:41, from ../../source/densfromf/recursive_expansion/src/purification_general.h:38, from ../../source/densfromf/recursive_expansion/src/purification_sp2acc.h:33, from recexp_randsym_test.cc:41: /usr/include/c++/8/bits/stl_vector.h: In member function 'void Purification_sp2::estimate_number_of_iterations(int&) [with MatrixType = ErgoMatrix > > > > > >]': /usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 _M_fill_insert(end(), __new_size - size(), __x); ^~~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from ../../source/matrix/Matrix.h:64, from ../../source/matrix_typedefs.h:41, from ../../source/densfromf/recursive_expansion/src/purification_general.h:38, from ../../source/densfromf/recursive_expansion/src/purification_sp2acc.h:33, from recexp_randsym_test.cc:41: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __insertion_sort(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 In file included from /usr/include/c++/8/bits/stl_algo.h:61, from /usr/include/c++/8/algorithm:62, from ../../source/matrix/Matrix.h:64, from ../../source/matrix_typedefs.h:41, from ../../source/densfromf/recursive_expansion/src/purification_general.h:38, from ../../source/densfromf/recursive_expansion/src/purification_sp2acc.h:33, from recexp_randsym_test.cc:41: /usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Distance = int; _Tp = double; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex, ^~~~~~~~~~~~~ In file included from /usr/include/c++/8/algorithm:62, from ../../source/matrix/Matrix.h:64, from ../../source/matrix_typedefs.h:41, from ../../source/densfromf/recursive_expansion/src/purification_general.h:38, from ../../source/densfromf/recursive_expansion/src/purification_sp2acc.h:33, from recexp_randsym_test.cc:41: /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __introsort_loop(_RandomAccessIterator __first, ^~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__cut, __last, __depth_limit, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]': /usr/include/c++/8/bits/stl_algo.h:1963:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 __sort(_RandomAccessIterator __first, _RandomAccessIterator __last, ^~~~~~ /usr/include/c++/8/bits/stl_algo.h:1963:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 /usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__introsort_loop(__first, __last, ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ std::__lg(__last - __first) * 2, ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __comp); ~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __first + int(_S_threshold), __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__insertion_sort(__first, __last, __comp); ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'Treal mat::EuclTruncationBase::run(Treal) [with Tmatrix = mat::MatrixSymmetric > > > > >; Treal = double]': /usr/include/c++/8/bits/stl_algo.h:4834:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_less_iter()); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'Treal mat::EuclTruncationBase::run(Treal) [with Tmatrix = mat::MatrixSymmetric > > > >; Treal = double]': /usr/include/c++/8/bits/stl_algo.h:4834:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_less_iter()); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/8/bits/stl_algo.h: In member function 'Treal mat::MatrixSymmetric::thresh(Treal, mat::normType) [with Treal = double; Tmatrix = mat::Matrix > > > >]': /usr/include/c++/8/bits/stl_algo.h:4834:18: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 std::__sort(__first, __last, __gnu_cxx::__ops::__iter_less_iter()); ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ c++ -g -O2 -ffile-prefix-map=/build/ergo-3.5=. -fstack-protector-strong -Wformat -Werror=format-security -fopenmp -fopenmp -Wl,-z,relro -Wl,--as-needed -o recexp_randsym_test recexp_randsym_test.o ../../source/densfromf/libdensfromf.a ../../source/densfromf/recursive_expansion/src/libpurification.a ../../source/matrix_wrapper/file_tools/src/libfiles.a ../../source/utilities_basic/libutilities_basic.a ../../source/matrix/template_lapack/blas/libtemplateblas.a ../../source/matrix/template_lapack/lapack/libtemplatelapack.a ../../source/matrix/libmat.a -llapack -lpthread -lm -lf77blas -latlas make[4]: Leaving directory '/build/ergo-3.5/source/test' make[3]: Leaving directory '/build/ergo-3.5/source' make[2]: Leaving directory '/build/ergo-3.5/source' Making all in basis make[2]: Entering directory '/build/ergo-3.5/basis' make[2]: Nothing to be done for 'all'. make[2]: Leaving directory '/build/ergo-3.5/basis' Making all in params make[2]: Entering directory '/build/ergo-3.5/params' make[2]: Nothing to be done for 'all'. make[2]: Leaving directory '/build/ergo-3.5/params' Making all in mol make[2]: Entering directory '/build/ergo-3.5/mol' make[2]: Nothing to be done for 'all'. make[2]: Leaving directory '/build/ergo-3.5/mol' Making all in test make[2]: Entering directory '/build/ergo-3.5/test' make[2]: Nothing to be done for 'all'. make[2]: Leaving directory '/build/ergo-3.5/test' Making all in documentation/source make[2]: Entering directory '/build/ergo-3.5/documentation/source' make[2]: Nothing to be done for 'all'. make[2]: Leaving directory '/build/ergo-3.5/documentation/source' make[2]: Entering directory '/build/ergo-3.5' make[2]: Nothing to be done for 'all-am'. make[2]: Leaving directory '/build/ergo-3.5' make[1]: Leaving directory '/build/ergo-3.5' debian/rules override_dh_auto_test make[1]: Entering directory '/build/ergo-3.5' dh_auto_test dh_auto_test: Compatibility levels before 9 are deprecated (level 7 in use) make -j1 check VERBOSE=1 make[2]: Entering directory '/build/ergo-3.5' Making check in source make[3]: Entering directory '/build/ergo-3.5/source' make check-recursive make[4]: Entering directory '/build/ergo-3.5/source' Making check in basisset make[5]: Entering directory '/build/ergo-3.5/source/basisset' make[5]: Nothing to be done for 'check'. make[5]: Leaving directory '/build/ergo-3.5/source/basisset' Making check in ci make[5]: Entering directory '/build/ergo-3.5/source/ci' make[5]: Nothing to be done for 'check'. make[5]: Leaving directory '/build/ergo-3.5/source/ci' Making check in utilities make[5]: Entering directory '/build/ergo-3.5/source/utilities' make[5]: Nothing to be done for 'check'. make[5]: Leaving directory '/build/ergo-3.5/source/utilities' Making check in utilities_basic make[5]: Entering directory '/build/ergo-3.5/source/utilities_basic' make[5]: Nothing to be done for 'check'. make[5]: Leaving directory '/build/ergo-3.5/source/utilities_basic' Making check in matrix make[5]: Entering directory '/build/ergo-3.5/source/matrix' Making check in template_lapack make[6]: Entering directory '/build/ergo-3.5/source/matrix/template_lapack' Making check in blas make[7]: Entering directory '/build/ergo-3.5/source/matrix/template_lapack/blas' make check-TESTS make[8]: Entering directory '/build/ergo-3.5/source/matrix/template_lapack/blas' make[9]: Entering directory '/build/ergo-3.5/source/matrix/template_lapack/blas' PASS: test.sh ============================================================================ Testsuite summary for ERGO 3.5 ============================================================================ # TOTAL: 1 # PASS: 1 # SKIP: 0 # XFAIL: 0 # FAIL: 0 # XPASS: 0 # ERROR: 0 ============================================================================ make[9]: Leaving directory '/build/ergo-3.5/source/matrix/template_lapack/blas' make[8]: Leaving directory '/build/ergo-3.5/source/matrix/template_lapack/blas' make[7]: Leaving directory '/build/ergo-3.5/source/matrix/template_lapack/blas' Making check in lapack make[7]: Entering directory '/build/ergo-3.5/source/matrix/template_lapack/lapack' make check-TESTS make[8]: Entering directory '/build/ergo-3.5/source/matrix/template_lapack/lapack' make[9]: Entering directory '/build/ergo-3.5/source/matrix/template_lapack/lapack' PASS: test.sh ============================================================================ Testsuite summary for ERGO 3.5 ============================================================================ # TOTAL: 1 # PASS: 1 # SKIP: 0 # XFAIL: 0 # FAIL: 0 # XPASS: 0 # ERROR: 0 ============================================================================ make[9]: Leaving directory '/build/ergo-3.5/source/matrix/template_lapack/lapack' make[8]: Leaving directory '/build/ergo-3.5/source/matrix/template_lapack/lapack' make[7]: Leaving directory '/build/ergo-3.5/source/matrix/template_lapack/lapack' make[7]: Entering directory '/build/ergo-3.5/source/matrix/template_lapack' make[7]: Nothing to be done for 'check-am'. make[7]: Leaving directory '/build/ergo-3.5/source/matrix/template_lapack' make[6]: Leaving directory '/build/ergo-3.5/source/matrix/template_lapack' make[6]: Entering directory '/build/ergo-3.5/source/matrix' make check-TESTS make[7]: Entering directory '/build/ergo-3.5/source/matrix' make[8]: Entering directory '/build/ergo-3.5/source/matrix' PASS: test.sh ============================================================================ Testsuite summary for ERGO 3.5 ============================================================================ # TOTAL: 1 # PASS: 1 # SKIP: 0 # XFAIL: 0 # FAIL: 0 # XPASS: 0 # ERROR: 0 ============================================================================ make[8]: Leaving directory '/build/ergo-3.5/source/matrix' make[7]: Leaving directory '/build/ergo-3.5/source/matrix' make[6]: Leaving directory '/build/ergo-3.5/source/matrix' make[5]: Leaving directory '/build/ergo-3.5/source/matrix' Making check in matrix_wrapper make[5]: Entering directory '/build/ergo-3.5/source/matrix_wrapper' Making check in file_tools make[6]: Entering directory '/build/ergo-3.5/source/matrix_wrapper/file_tools' Making check in src make[7]: Entering directory '/build/ergo-3.5/source/matrix_wrapper/file_tools/src' make[7]: Nothing to be done for 'check'. make[7]: Leaving directory '/build/ergo-3.5/source/matrix_wrapper/file_tools/src' Making check in test make[7]: Entering directory '/build/ergo-3.5/source/matrix_wrapper/file_tools/test' make[7]: Nothing to be done for 'check'. make[7]: Leaving directory '/build/ergo-3.5/source/matrix_wrapper/file_tools/test' make[7]: Entering directory '/build/ergo-3.5/source/matrix_wrapper/file_tools' make[7]: Nothing to be done for 'check-am'. make[7]: Leaving directory '/build/ergo-3.5/source/matrix_wrapper/file_tools' make[6]: Leaving directory '/build/ergo-3.5/source/matrix_wrapper/file_tools' Making check in ErgoMatrix make[6]: Entering directory '/build/ergo-3.5/source/matrix_wrapper/ErgoMatrix' Making check in src make[7]: Entering directory '/build/ergo-3.5/source/matrix_wrapper/ErgoMatrix/src' make[7]: Nothing to be done for 'check'. make[7]: Leaving directory '/build/ergo-3.5/source/matrix_wrapper/ErgoMatrix/src' Making check in test make[7]: Entering directory '/build/ergo-3.5/source/matrix_wrapper/ErgoMatrix/test' make[7]: Nothing to be done for 'check'. make[7]: Leaving directory '/build/ergo-3.5/source/matrix_wrapper/ErgoMatrix/test' make[7]: Entering directory '/build/ergo-3.5/source/matrix_wrapper/ErgoMatrix' make[7]: Nothing to be done for 'check-am'. make[7]: Leaving directory '/build/ergo-3.5/source/matrix_wrapper/ErgoMatrix' make[6]: Leaving directory '/build/ergo-3.5/source/matrix_wrapper/ErgoMatrix' make[6]: Entering directory '/build/ergo-3.5/source/matrix_wrapper' make[6]: Nothing to be done for 'check-am'. make[6]: Leaving directory '/build/ergo-3.5/source/matrix_wrapper' make[5]: Leaving directory '/build/ergo-3.5/source/matrix_wrapper' Making check in densfromf make[5]: Entering directory '/build/ergo-3.5/source/densfromf' Making check in recursive_expansion make[6]: Entering directory '/build/ergo-3.5/source/densfromf/recursive_expansion' Making check in src make[7]: Entering directory '/build/ergo-3.5/source/densfromf/recursive_expansion/src' make[7]: Nothing to be done for 'check'. make[7]: Leaving directory '/build/ergo-3.5/source/densfromf/recursive_expansion/src' make[7]: Entering directory '/build/ergo-3.5/source/densfromf/recursive_expansion' make[7]: Nothing to be done for 'check-am'. make[7]: Leaving directory '/build/ergo-3.5/source/densfromf/recursive_expansion' make[6]: Leaving directory '/build/ergo-3.5/source/densfromf/recursive_expansion' make[6]: Entering directory '/build/ergo-3.5/source/densfromf' make[6]: Nothing to be done for 'check-am'. make[6]: Leaving directory '/build/ergo-3.5/source/densfromf' make[5]: Leaving directory '/build/ergo-3.5/source/densfromf' Making check in dft make[5]: Entering directory '/build/ergo-3.5/source/dft' make[5]: Nothing to be done for 'check'. make[5]: Leaving directory '/build/ergo-3.5/source/dft' Making check in electron_dynamics make[5]: Entering directory '/build/ergo-3.5/source/electron_dynamics' make[5]: Nothing to be done for 'check'. make[5]: Leaving directory '/build/ergo-3.5/source/electron_dynamics' Making check in integrals make[5]: Entering directory '/build/ergo-3.5/source/integrals' make[5]: Nothing to be done for 'check'. make[5]: Leaving directory '/build/ergo-3.5/source/integrals' Making check in scf make[5]: Entering directory '/build/ergo-3.5/source/scf' make[5]: Nothing to be done for 'check'. make[5]: Leaving directory '/build/ergo-3.5/source/scf' Making check in . make[5]: Entering directory '/build/ergo-3.5/source' make[5]: Leaving directory '/build/ergo-3.5/source' Making check in tddft make[5]: Entering directory '/build/ergo-3.5/source/tddft' make[5]: Nothing to be done for 'check'. make[5]: Leaving directory '/build/ergo-3.5/source/tddft' Making check in test make[5]: Entering directory '/build/ergo-3.5/source/test' make check-TESTS make[6]: Entering directory '/build/ergo-3.5/source/test' make[7]: Entering directory '/build/ergo-3.5/source/test' PASS: basicmath_test PASS: lapack_test PASS: recexp_diag_test PASS: recexp_randsym_test PASS: grid_test PASS: stream_test PASS: xcmat_test PASS: xcmat_sparse_test PASS: xcmat_nan_inf_test PASS: tmat_test PASS: vmat_test PASS: gradient_test PASS: mat_thread_test PASS: mat_performance_test PASS: jmat_test PASS: jmat_extrapolate_test PASS: kmat_test PASS: kmat_symm_test PASS: kmat_nosymm_test PASS: naive_response_test PASS: explicit_integral_test PASS: matmem_test PASS: mmul_simple_test PASS: mmul_simple_many_test PASS: mmul_rectangular_test ============================================================================ Testsuite summary for ERGO 3.5 ============================================================================ # TOTAL: 25 # PASS: 25 # SKIP: 0 # XFAIL: 0 # FAIL: 0 # XPASS: 0 # ERROR: 0 ============================================================================ make[7]: Leaving directory '/build/ergo-3.5/source/test' make[6]: Leaving directory '/build/ergo-3.5/source/test' make[5]: Leaving directory '/build/ergo-3.5/source/test' make[4]: Leaving directory '/build/ergo-3.5/source' make[3]: Leaving directory '/build/ergo-3.5/source' Making check in basis make[3]: Entering directory '/build/ergo-3.5/basis' make[3]: Nothing to be done for 'check'. make[3]: Leaving directory '/build/ergo-3.5/basis' Making check in params make[3]: Entering directory '/build/ergo-3.5/params' make[3]: Nothing to be done for 'check'. make[3]: Leaving directory '/build/ergo-3.5/params' Making check in mol make[3]: Entering directory '/build/ergo-3.5/mol' make[3]: Nothing to be done for 'check'. make[3]: Leaving directory '/build/ergo-3.5/mol' Making check in test make[3]: Entering directory '/build/ergo-3.5/test' make check-TESTS make[4]: Entering directory '/build/ergo-3.5/test' make[5]: Entering directory '/build/ergo-3.5/test' PASS: test_tdhf_dynamics.sh PASS: test_lowacc.sh PASS: test_dft_hybrid.sh PASS: test_dft_pure.sh PASS: test_dft_hicu.sh PASS: test_dft_sparse.sh PASS: test_dipole_moment.sh PASS: test_ext_elec_field.sh PASS: test_extracharges.sh PASS: test_fmm.sh PASS: test_fmm_b3lyp.sh PASS: test_fmm_camb3lyp.sh PASS: test_ghost.sh PASS: test_gradient.sh PASS: test_input_args.sh PASS: test_hf.sh PASS: test_hf_acc.sh PASS: test_6_d_funcs.sh PASS: test_hf_blsz1.sh PASS: test_hf_blsz2.sh PASS: test_hf_fd.sh PASS: test_brh.sh PASS: test_lr_exc.sh PASS: test_lr_exc_hf.sh PASS: test_lr_pol.sh PASS: test_mixedbasis.sh PASS: test_roks.sh PASS: test_uhf.sh PASS: test_ci.sh ============================================================================ Testsuite summary for ERGO 3.5 ============================================================================ # TOTAL: 29 # PASS: 29 # SKIP: 0 # XFAIL: 0 # FAIL: 0 # XPASS: 0 # ERROR: 0 ============================================================================ make[5]: Leaving directory '/build/ergo-3.5/test' make[4]: Leaving directory '/build/ergo-3.5/test' make[3]: Leaving directory '/build/ergo-3.5/test' Making check in documentation/source make[3]: Entering directory '/build/ergo-3.5/documentation/source' make[3]: Nothing to be done for 'check'. make[3]: Leaving directory '/build/ergo-3.5/documentation/source' make[3]: Entering directory '/build/ergo-3.5' make[3]: Nothing to be done for 'check-am'. make[3]: Leaving directory '/build/ergo-3.5' make[2]: Leaving directory '/build/ergo-3.5' make[1]: Leaving directory '/build/ergo-3.5' fakeroot debian/rules binary dh binary --with autotools_dev dh: Compatibility levels before 9 are deprecated (level 7 in use) dh: The autotools-dev sequence is deprecated and replaced by dh in debhelper (>= 9.20160115) dh: This feature will be removed in compat 12. dh_testroot dh_prep debian/rules override_dh_auto_install make[1]: Entering directory '/build/ergo-3.5' dh_auto_install dh_auto_install: Compatibility levels before 9 are deprecated (level 7 in use) make -j1 install DESTDIR=/build/ergo-3.5/debian/ergo AM_UPDATE_INFO_DIR=no make[2]: Entering directory '/build/ergo-3.5' Making install in source make[3]: Entering directory '/build/ergo-3.5/source' make install-recursive make[4]: Entering directory '/build/ergo-3.5/source' Making install in basisset make[5]: Entering directory '/build/ergo-3.5/source/basisset' make[6]: Entering directory '/build/ergo-3.5/source/basisset' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/build/ergo-3.5/source/basisset' make[5]: Leaving directory '/build/ergo-3.5/source/basisset' Making install in ci make[5]: Entering directory '/build/ergo-3.5/source/ci' make[6]: Entering directory '/build/ergo-3.5/source/ci' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/build/ergo-3.5/source/ci' make[5]: Leaving directory '/build/ergo-3.5/source/ci' Making install in utilities make[5]: Entering directory '/build/ergo-3.5/source/utilities' make[6]: Entering directory '/build/ergo-3.5/source/utilities' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/build/ergo-3.5/source/utilities' make[5]: Leaving directory '/build/ergo-3.5/source/utilities' Making install in utilities_basic make[5]: Entering directory '/build/ergo-3.5/source/utilities_basic' make[6]: Entering directory '/build/ergo-3.5/source/utilities_basic' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/build/ergo-3.5/source/utilities_basic' make[5]: Leaving directory '/build/ergo-3.5/source/utilities_basic' Making install in matrix make[5]: Entering directory '/build/ergo-3.5/source/matrix' Making install in template_lapack make[6]: Entering directory '/build/ergo-3.5/source/matrix/template_lapack' Making install in blas make[7]: Entering directory '/build/ergo-3.5/source/matrix/template_lapack/blas' make[8]: Entering directory '/build/ergo-3.5/source/matrix/template_lapack/blas' make[8]: Nothing to be done for 'install-exec-am'. make[8]: Nothing to be done for 'install-data-am'. make[8]: Leaving directory '/build/ergo-3.5/source/matrix/template_lapack/blas' make[7]: Leaving directory '/build/ergo-3.5/source/matrix/template_lapack/blas' Making install in lapack make[7]: Entering directory '/build/ergo-3.5/source/matrix/template_lapack/lapack' make[8]: Entering directory '/build/ergo-3.5/source/matrix/template_lapack/lapack' make[8]: Nothing to be done for 'install-exec-am'. make[8]: Nothing to be done for 'install-data-am'. make[8]: Leaving directory '/build/ergo-3.5/source/matrix/template_lapack/lapack' make[7]: Leaving directory '/build/ergo-3.5/source/matrix/template_lapack/lapack' make[7]: Entering directory '/build/ergo-3.5/source/matrix/template_lapack' make[8]: Entering directory '/build/ergo-3.5/source/matrix/template_lapack' make[8]: Nothing to be done for 'install-exec-am'. make[8]: Nothing to be done for 'install-data-am'. make[8]: Leaving directory '/build/ergo-3.5/source/matrix/template_lapack' make[7]: Leaving directory '/build/ergo-3.5/source/matrix/template_lapack' make[6]: Leaving directory '/build/ergo-3.5/source/matrix/template_lapack' make[6]: Entering directory '/build/ergo-3.5/source/matrix' make[7]: Entering directory '/build/ergo-3.5/source/matrix' make[7]: Nothing to be done for 'install-exec-am'. make[7]: Nothing to be done for 'install-data-am'. make[7]: Leaving directory '/build/ergo-3.5/source/matrix' make[6]: Leaving directory '/build/ergo-3.5/source/matrix' make[5]: Leaving directory '/build/ergo-3.5/source/matrix' Making install in matrix_wrapper make[5]: Entering directory '/build/ergo-3.5/source/matrix_wrapper' Making install in file_tools make[6]: Entering directory '/build/ergo-3.5/source/matrix_wrapper/file_tools' Making install in src make[7]: Entering directory '/build/ergo-3.5/source/matrix_wrapper/file_tools/src' make[8]: Entering directory '/build/ergo-3.5/source/matrix_wrapper/file_tools/src' make[8]: Nothing to be done for 'install-exec-am'. make[8]: Nothing to be done for 'install-data-am'. make[8]: Leaving directory '/build/ergo-3.5/source/matrix_wrapper/file_tools/src' make[7]: Leaving directory '/build/ergo-3.5/source/matrix_wrapper/file_tools/src' Making install in test make[7]: Entering directory '/build/ergo-3.5/source/matrix_wrapper/file_tools/test' make[8]: Entering directory '/build/ergo-3.5/source/matrix_wrapper/file_tools/test' make[8]: Nothing to be done for 'install-exec-am'. make[8]: Nothing to be done for 'install-data-am'. make[8]: Leaving directory '/build/ergo-3.5/source/matrix_wrapper/file_tools/test' make[7]: Leaving directory '/build/ergo-3.5/source/matrix_wrapper/file_tools/test' make[7]: Entering directory '/build/ergo-3.5/source/matrix_wrapper/file_tools' make[8]: Entering directory '/build/ergo-3.5/source/matrix_wrapper/file_tools' make[8]: Nothing to be done for 'install-exec-am'. make[8]: Nothing to be done for 'install-data-am'. make[8]: Leaving directory '/build/ergo-3.5/source/matrix_wrapper/file_tools' make[7]: Leaving directory '/build/ergo-3.5/source/matrix_wrapper/file_tools' make[6]: Leaving directory '/build/ergo-3.5/source/matrix_wrapper/file_tools' Making install in ErgoMatrix make[6]: Entering directory '/build/ergo-3.5/source/matrix_wrapper/ErgoMatrix' Making install in src make[7]: Entering directory '/build/ergo-3.5/source/matrix_wrapper/ErgoMatrix/src' make[8]: Entering directory '/build/ergo-3.5/source/matrix_wrapper/ErgoMatrix/src' make[8]: Nothing to be done for 'install-exec-am'. make[8]: Nothing to be done for 'install-data-am'. make[8]: Leaving directory '/build/ergo-3.5/source/matrix_wrapper/ErgoMatrix/src' make[7]: Leaving directory '/build/ergo-3.5/source/matrix_wrapper/ErgoMatrix/src' Making install in test make[7]: Entering directory '/build/ergo-3.5/source/matrix_wrapper/ErgoMatrix/test' make[8]: Entering directory '/build/ergo-3.5/source/matrix_wrapper/ErgoMatrix/test' make[8]: Nothing to be done for 'install-exec-am'. make[8]: Nothing to be done for 'install-data-am'. make[8]: Leaving directory '/build/ergo-3.5/source/matrix_wrapper/ErgoMatrix/test' make[7]: Leaving directory '/build/ergo-3.5/source/matrix_wrapper/ErgoMatrix/test' make[7]: Entering directory '/build/ergo-3.5/source/matrix_wrapper/ErgoMatrix' make[8]: Entering directory '/build/ergo-3.5/source/matrix_wrapper/ErgoMatrix' make[8]: Nothing to be done for 'install-exec-am'. make[8]: Nothing to be done for 'install-data-am'. make[8]: Leaving directory '/build/ergo-3.5/source/matrix_wrapper/ErgoMatrix' make[7]: Leaving directory '/build/ergo-3.5/source/matrix_wrapper/ErgoMatrix' make[6]: Leaving directory '/build/ergo-3.5/source/matrix_wrapper/ErgoMatrix' make[6]: Entering directory '/build/ergo-3.5/source/matrix_wrapper' make[7]: Entering directory '/build/ergo-3.5/source/matrix_wrapper' make[7]: Nothing to be done for 'install-exec-am'. make[7]: Nothing to be done for 'install-data-am'. make[7]: Leaving directory '/build/ergo-3.5/source/matrix_wrapper' make[6]: Leaving directory '/build/ergo-3.5/source/matrix_wrapper' make[5]: Leaving directory '/build/ergo-3.5/source/matrix_wrapper' Making install in densfromf make[5]: Entering directory '/build/ergo-3.5/source/densfromf' Making install in recursive_expansion make[6]: Entering directory '/build/ergo-3.5/source/densfromf/recursive_expansion' Making install in src make[7]: Entering directory '/build/ergo-3.5/source/densfromf/recursive_expansion/src' make[8]: Entering directory '/build/ergo-3.5/source/densfromf/recursive_expansion/src' make[8]: Nothing to be done for 'install-exec-am'. make[8]: Nothing to be done for 'install-data-am'. make[8]: Leaving directory '/build/ergo-3.5/source/densfromf/recursive_expansion/src' make[7]: Leaving directory '/build/ergo-3.5/source/densfromf/recursive_expansion/src' make[7]: Entering directory '/build/ergo-3.5/source/densfromf/recursive_expansion' make[8]: Entering directory '/build/ergo-3.5/source/densfromf/recursive_expansion' make[8]: Nothing to be done for 'install-exec-am'. make[8]: Nothing to be done for 'install-data-am'. make[8]: Leaving directory '/build/ergo-3.5/source/densfromf/recursive_expansion' make[7]: Leaving directory '/build/ergo-3.5/source/densfromf/recursive_expansion' make[6]: Leaving directory '/build/ergo-3.5/source/densfromf/recursive_expansion' make[6]: Entering directory '/build/ergo-3.5/source/densfromf' make[7]: Entering directory '/build/ergo-3.5/source/densfromf' make[7]: Nothing to be done for 'install-exec-am'. make[7]: Nothing to be done for 'install-data-am'. make[7]: Leaving directory '/build/ergo-3.5/source/densfromf' make[6]: Leaving directory '/build/ergo-3.5/source/densfromf' make[5]: Leaving directory '/build/ergo-3.5/source/densfromf' Making install in dft make[5]: Entering directory '/build/ergo-3.5/source/dft' make[6]: Entering directory '/build/ergo-3.5/source/dft' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/build/ergo-3.5/source/dft' make[5]: Leaving directory '/build/ergo-3.5/source/dft' Making install in electron_dynamics make[5]: Entering directory '/build/ergo-3.5/source/electron_dynamics' make[6]: Entering directory '/build/ergo-3.5/source/electron_dynamics' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/build/ergo-3.5/source/electron_dynamics' make[5]: Leaving directory '/build/ergo-3.5/source/electron_dynamics' Making install in integrals make[5]: Entering directory '/build/ergo-3.5/source/integrals' make[6]: Entering directory '/build/ergo-3.5/source/integrals' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/build/ergo-3.5/source/integrals' make[5]: Leaving directory '/build/ergo-3.5/source/integrals' Making install in scf make[5]: Entering directory '/build/ergo-3.5/source/scf' make[6]: Entering directory '/build/ergo-3.5/source/scf' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/build/ergo-3.5/source/scf' make[5]: Leaving directory '/build/ergo-3.5/source/scf' Making install in . make[5]: Entering directory '/build/ergo-3.5/source' make[6]: Entering directory '/build/ergo-3.5/source' /bin/mkdir -p '/build/ergo-3.5/debian/ergo/usr/bin' /usr/bin/install -c ergo '/build/ergo-3.5/debian/ergo/usr/bin' make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/build/ergo-3.5/source' make[5]: Leaving directory '/build/ergo-3.5/source' Making install in tddft make[5]: Entering directory '/build/ergo-3.5/source/tddft' make[6]: Entering directory '/build/ergo-3.5/source/tddft' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/build/ergo-3.5/source/tddft' make[5]: Leaving directory '/build/ergo-3.5/source/tddft' Making install in test make[5]: Entering directory '/build/ergo-3.5/source/test' make[6]: Entering directory '/build/ergo-3.5/source/test' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/build/ergo-3.5/source/test' make[5]: Leaving directory '/build/ergo-3.5/source/test' make[4]: Leaving directory '/build/ergo-3.5/source' make[3]: Leaving directory '/build/ergo-3.5/source' Making install in basis make[3]: Entering directory '/build/ergo-3.5/basis' make[4]: Entering directory '/build/ergo-3.5/basis' make[4]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/build/ergo-3.5/debian/ergo/usr/share/ergo/basis' /usr/bin/install -c -m 644 hybrid-guess-basis 3-21G 3-21++G 3-21Gs 3-21++Gs 4-31G 6-311G 6-31G 6-31Gs 6-31Gss 6-31+G 6-31++G 6-31++Gs 6-31++Gss 6-311++Gss 6-311Gs 6-311+Gs 6-311Gss 6-31Gfixed Ahlrichs-Coulomb-Fit AhlrichsDenFit Ahlrichs-pVDZ Ahlrichs-TZV AhlrichsVDZ Ahlrichs-VDZ AhlrichsVTZ Ahlrichs-VTZ Almlof-Taylor-ANO ano-1 ano-2 ano-3 ano-4 ano-5 aug-cc-pCV5Z aug-cc-pCVDZ aug-cc-pCVQZ aug-cc-pCVTZ aug-cc-pCVTZ-CTOCD-uc aug-cc-pV(5+d)Z aug-cc-pV5Z '/build/ergo-3.5/debian/ergo/usr/share/ergo/basis' /usr/bin/install -c -m 644 aug-cc-pV(6+d)Z aug-cc-pV6Z aug-cc-pV(D+d)Z aug-cc-pVDZ aug-cc-pV(Q+d)Z aug-cc-pVQZ aug-cc-pV(T+d)Z aug-cc-pVTZ aug-cc-pVTZ-J aug-pV7Z cc-pCV5Z cc-pCVDZ cc-pCVQZ cc-pCVTZ cc-pV(5+d)Z cc-pV5Z cc-pV5Zdenfit cc-pV5Z-DK cc-pV(6+d)Z cc-pV6Z cc-pV(D+d)Z cc-pVDZ cc-pVDZ-DK cc-pV(Q+d)Z cc-pVQZ cc-pVQZdenfit cc-pVQZ-DK cc-pV(T+d)Z cc-pVTZ cc-pVTZdenfit cc-pVTZ-DK cc-pwCV5Z cc-pwCVDZ cc-pwCVQZ cc-pwCVTZ DunningDZ DunningTZ ECP ECP_pseudo ecp-sdd-DZ '/build/ergo-3.5/debian/ergo/usr/share/ergo/basis' /usr/bin/install -c -m 644 ecp-sdd-pseudo GAMESS-PVTZ GAMESS-VTZ Huckel Huz-II Huz-III Huz-IIIsu3 Huz-IIsu2 Huz-IV Huz-IVsu4 japrtano McLean-Chandler-VTZ MIDI NASA-Ames-ANO NQvD pV6Z pV7Z raf-r RoosAugDZANO sad-J sadlej Sadlej-pVTZ Sadlej-pVTZ-J STO-1G STO-2G STO-3G STO-6G Turbomole-DZ Turbomole-DZP Turbomole-QZV Turbomole-QZVP Turbomole-QZVPP Turbomole-SV Turbomole-SVP Turbomole-TZ Turbomole-TZP Turbomole-TZV Turbomole-TZVP Turbomole-TZVPP Turbomole-TZVPPP '/build/ergo-3.5/debian/ergo/usr/share/ergo/basis' /usr/bin/install -c -m 644 Wachtersa+f '/build/ergo-3.5/debian/ergo/usr/share/ergo/basis' make[4]: Leaving directory '/build/ergo-3.5/basis' make[3]: Leaving directory '/build/ergo-3.5/basis' Making install in params make[3]: Entering directory '/build/ergo-3.5/params' make[4]: Entering directory '/build/ergo-3.5/params' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/build/ergo-3.5/params' make[3]: Leaving directory '/build/ergo-3.5/params' Making install in mol make[3]: Entering directory '/build/ergo-3.5/mol' make[4]: Entering directory '/build/ergo-3.5/mol' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/build/ergo-3.5/mol' make[3]: Leaving directory '/build/ergo-3.5/mol' Making install in test make[3]: Entering directory '/build/ergo-3.5/test' make[4]: Entering directory '/build/ergo-3.5/test' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/build/ergo-3.5/test' make[3]: Leaving directory '/build/ergo-3.5/test' Making install in documentation/source make[3]: Entering directory '/build/ergo-3.5/documentation/source' make[4]: Entering directory '/build/ergo-3.5/documentation/source' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/build/ergo-3.5/documentation/source' make[3]: Leaving directory '/build/ergo-3.5/documentation/source' make[3]: Entering directory '/build/ergo-3.5' make[4]: Entering directory '/build/ergo-3.5' make[4]: Nothing to be done for 'install-exec-am'. make[4]: Nothing to be done for 'install-data-am'. make[4]: Leaving directory '/build/ergo-3.5' make[3]: Leaving directory '/build/ergo-3.5' make[2]: Leaving directory '/build/ergo-3.5' rm -f /build/ergo-3.5/debian/ergo/usr/bin/test make[1]: Leaving directory '/build/ergo-3.5' dh_installdocs dh_installdocs: Compatibility levels before 9 are deprecated (level 7 in use) debian/rules override_dh_installchangelogs make[1]: Entering directory '/build/ergo-3.5' dh_installchangelogs ergo_release_notes_*.txt make[1]: Leaving directory '/build/ergo-3.5' dh_perl dh_link dh_strip_nondeterminism dh_compress dh_compress: Compatibility levels before 9 are deprecated (level 7 in use) dh_fixperms dh_missing dh_missing: Compatibility levels before 9 are deprecated (level 7 in use) dh_strip dh_strip: Compatibility levels before 9 are deprecated (level 7 in use) dh_makeshlibs dh_shlibdeps dh_shlibdeps: Compatibility levels before 9 are deprecated (level 7 in use) dpkg-shlibdeps: warning: debian/ergo/usr/bin/ergo contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dh_installdeb dh_installdeb: Compatibility levels before 9 are deprecated (level 7 in use) dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'ergo-dbgsym' in '../ergo-dbgsym_3.5-1_armhf.deb'. dpkg-deb: building package 'ergo' in '../ergo_3.5-1_armhf.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../ergo_3.5-1_armhf.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/30873 and its subdirectories I: Current time: Mon Jun 8 12:20:14 -12 2020 I: pbuilder-time-stamp: 1591662014 Tue Jun 9 00:20:39 UTC 2020 I: 1st build successful. Starting 2nd build on remote node bbx15-armhf-rb.debian.net. Tue Jun 9 00:20:39 UTC 2020 I: Preparing to do remote build '2' on bbx15-armhf-rb.debian.net. Tue Jun 9 01:51:52 UTC 2020 I: Deleting $TMPDIR on bbx15-armhf-rb.debian.net. Tue Jun 9 01:51:54 UTC 2020 I: ergo_3.5-1_armhf.changes: Format: 1.8 Date: Fri, 23 Sep 2016 21:18:21 +0200 Source: ergo Binary: ergo ergo-dbgsym Architecture: armhf Version: 3.5-1 Distribution: unstable Urgency: medium Maintainer: Debichem Team Changed-By: Michael Banck Description: ergo - Quantum chemistry program for large-scale calculations Changes: ergo (3.5-1) unstable; urgency=medium . * New upstream release. Checksums-Sha1: 4bf8661131289b73936d40afc41340ee57c89c5f 8616792 ergo-dbgsym_3.5-1_armhf.deb 2834fe759b2c82a0760236fc38bc2496058305d5 4698 ergo_3.5-1_armhf.buildinfo 168b7fc822af4f5dd5c52724da492a990e291654 1296796 ergo_3.5-1_armhf.deb Checksums-Sha256: 3d387ffc100a4e9d6e079d03d22149572edddec6b4866d1d5768bdba6a0caaac 8616792 ergo-dbgsym_3.5-1_armhf.deb 5f4091d8f25a0d94b2dcfef4061b77cfa4f6e2864152166d0ca9f5ed5ba84954 4698 ergo_3.5-1_armhf.buildinfo 9b353daddf8f97603ab6f6d4b3e6be65251cdb5cbc6c440c17d902fdb0d120d2 1296796 ergo_3.5-1_armhf.deb Files: 07c6e985d9b174fdfc23c8ac4b12a6ed 8616792 debug optional ergo-dbgsym_3.5-1_armhf.deb 07d6f5e65c18be8e70ece467363254f5 4698 science optional ergo_3.5-1_armhf.buildinfo 8a062fbf95078534558bf6c18759d96c 1296796 science optional ergo_3.5-1_armhf.deb Tue Jun 9 01:51:56 UTC 2020 I: diffoscope 146 will be used to compare the two builds: # Profiling output for: /usr/bin/diffoscope --html /srv/reproducible-results/rbuild-debian/tmp.zYGVb3PbTL/ergo_3.5-1.diffoscope.html --text /srv/reproducible-results/rbuild-debian/tmp.zYGVb3PbTL/ergo_3.5-1.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/tmp.zYGVb3PbTL/ergo_3.5-1.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/tmp.zYGVb3PbTL/b1/ergo_3.5-1_armhf.changes /srv/reproducible-results/rbuild-debian/tmp.zYGVb3PbTL/b2/ergo_3.5-1_armhf.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.883s) 0.883s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.723s) 0.722s 10 calls diffoscope.comparators.binary.FilesystemFile 0.001s 8 calls abc.DotChangesFile Tue Jun 9 01:51:59 UTC 2020 I: diffoscope 146 found no differences in the changes files, and a .buildinfo file also exists. Tue Jun 9 01:51:59 UTC 2020 I: ergo from buster built successfully and reproducibly on armhf. Tue Jun 9 01:52:00 UTC 2020 I: Submitting .buildinfo files to external archives: Tue Jun 9 01:52:00 UTC 2020 I: Submitting 8.0K b1/ergo_3.5-1_armhf.buildinfo.asc Tue Jun 9 01:52:01 UTC 2020 I: Submitting 8.0K b2/ergo_3.5-1_armhf.buildinfo.asc Tue Jun 9 01:52:02 UTC 2020 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Tue Jun 9 01:52:02 UTC 2020 I: Done submitting .buildinfo files. Tue Jun 9 01:52:02 UTC 2020 I: Removing signed ergo_3.5-1_armhf.buildinfo.asc files: removed './b1/ergo_3.5-1_armhf.buildinfo.asc' removed './b2/ergo_3.5-1_armhf.buildinfo.asc'