Tue Sep 1 16:33:43 UTC 2020 I: starting to build libmpikmeans/buster/arm64 on jenkins on '2020-09-01 16:33' Tue Sep 1 16:33:43 UTC 2020 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/arm64_10/22301/console.log Tue Sep 1 16:33:43 UTC 2020 I: Downloading source for buster/libmpikmeans=1.5+dfsg-7 --2020-09-01 16:33:43-- http://deb.debian.org/debian/pool/main/libm/libmpikmeans/libmpikmeans_1.5+dfsg-7.dsc Connecting to 78.137.99.97:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2268 (2.2K) Saving to: ‘libmpikmeans_1.5+dfsg-7.dsc’ 0K .. 100% 14.8M=0s 2020-09-01 16:33:43 (14.8 MB/s) - ‘libmpikmeans_1.5+dfsg-7.dsc’ saved [2268/2268] Tue Sep 1 16:33:44 UTC 2020 I: libmpikmeans_1.5+dfsg-7.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: libmpikmeans Binary: libmpikmeans-dev, libmpikmeans1, mpikmeans-tools, python-mpikmeans Architecture: any Version: 1.5+dfsg-7 Maintainer: Christian Kastner Homepage: https://mloss.org/software/view/48/ Standards-Version: 4.3.0 Vcs-Browser: https://salsa.debian.org/science-team/libmpikmeans Vcs-Git: https://salsa.debian.org/science-team/libmpikmeans.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 12), dh-python, python-all-dev (>= 2.6.6-3~), cython, python-numpy, libboost-dev, libboost-filesystem-dev, libboost-program-options-dev Package-List: libmpikmeans-dev deb libdevel optional arch=any libmpikmeans1 deb libs optional arch=any mpikmeans-tools deb libs optional arch=any python-mpikmeans deb python optional arch=any Checksums-Sha1: e149b86aae77f13f144542c9f4924c79b5d4fa9e 29963 libmpikmeans_1.5+dfsg.orig.tar.gz b5815e250d12072a3ba779ac5b64cf7b0275f536 8632 libmpikmeans_1.5+dfsg-7.debian.tar.xz Checksums-Sha256: ccd51fec840369d9fedcbab2836ca66d29d4bb4ca597509988d019c15e3e28b4 29963 libmpikmeans_1.5+dfsg.orig.tar.gz 70735491ed3c52809af4fc9a3e136f2623a776adc377274659d3b133ffd2b901 8632 libmpikmeans_1.5+dfsg-7.debian.tar.xz Files: 8be8940d895d43442860c52c7b004564 29963 libmpikmeans_1.5+dfsg.orig.tar.gz e788ff07c1014d810e361421a31b3432 8632 libmpikmeans_1.5+dfsg-7.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJDBAEBCgAtFiEEQZ9+mkfDq5UZ8bCjOZU6N95Os2sFAlxq/kAPHGNra0BkZWJp YW4ub3JnAAoJEDmVOjfeTrNrV6MP/3CkXR1B+GGpaP7Yw1LIQU/bDrxidqHfdbVr jFMiolo9NN4Cxm9tLe24TpbAXC52AAL6Rzr/YGtmB7ETOrm8l/Kd6JIMDc1nY9WD h3g/cp5TrWyetEb7fv6DXQ6mEUQWCnuP+f8TuTheq8KGihfQhzwKTHbsnsLmYpx7 TV0l00T4XM2+urLlIwGk3B4huE3pHSeqGzfWaHQO31BoV284ytcWoioNTIhAbCVq zbr6ZE4nLLiQA/TFzDFGTb6tg2Dui+obJKxx0hf32iejr/PuMsSDP42psf3Lu/Ai wCRnA8kZW5YRwdEPhnLRBukVY/xgufjunLcTwrGk68L0RRfVcvH4Wh85Av3zf28t umzY+h9Vk9hnSBQhO/5Xg7mnDoyD754Tnwi3UOk75bXcer0B0HADRdsF6+f3ne7y daQhGiGo3tGszzo1vCqZoEWpHbFC2zPg4ohby7laTcWYCwYJuP9KKOU2Gyj1yIHc LyS7F1Or5luflHqxsZ+VR1EYgl9drMy+Ps/Vxo4/NBqR+m+PPayBf/QK7oRSDBTM YS97OxTcHBnRs/cYrrlhxbcZvOTU6i0HnXhk02kxmoYmNsmA43Dxeco1FcNB5LQs yi/u7rHUmXgVx9wIVZ7cuwAitoRalxk+tjHTs800WPbN5sNxb0oZulf0JpYQsqgz 9w0k3HQM =mScW -----END PGP SIGNATURE----- Tue Sep 1 16:33:44 UTC 2020 I: Checking whether the package is not for us Tue Sep 1 16:33:44 UTC 2020 I: Starting 1st build on remote node codethink-sled11-arm64.debian.net. Tue Sep 1 16:33:44 UTC 2020 I: Preparing to do remote build '1' on codethink-sled11-arm64.debian.net. Tue Sep 1 16:37:46 UTC 2020 I: Deleting $TMPDIR on codethink-sled11-arm64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Tue Sep 1 04:33:55 -12 2020 I: pbuilder-time-stamp: 1598978035 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/buster-reproducible-base.tgz] tar: ./bin/sh: time stamp 2021-10-03 02:48:38 is 34294482.35191908 s in the future tar: ./build: time stamp 2021-10-03 02:48:51 is 34294495.34238232 s in the future tar: ./dev/null: time stamp 2021-10-03 02:48:27 is 34294471.34110532 s in the future tar: ./dev/zero: time stamp 2021-10-03 02:48:27 is 34294471.3410408 s in the future tar: ./dev/full: time stamp 2021-10-03 02:48:27 is 34294471.34100694 s in the future tar: ./dev/random: time stamp 2021-10-03 02:48:27 is 34294471.34097304 s in the future tar: ./dev/urandom: time stamp 2021-10-03 02:48:27 is 34294471.3409364 s in the future tar: ./dev/tty: time stamp 2021-10-03 02:48:27 is 34294471.34090404 s in the future tar: ./dev/console: time stamp 2021-10-03 02:48:27 is 34294471.34087002 s 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stamp 2021-10-03 02:49:02 is 34294489.0631176 s in the future tar: ./usr/lib/locale/aa_ET/LC_MESSAGES: time stamp 2021-10-03 02:49:02 is 34294489.06309308 s in the future tar: ./usr/lib/locale/aa_ET: time stamp 2021-10-03 02:49:02 is 34294489.06306992 s in the future tar: ./usr/lib/locale/aa_ER@saaho/LC_MESSAGES: time stamp 2021-10-03 02:49:02 is 34294489.06304506 s in the future tar: ./usr/lib/locale/aa_ER@saaho: time stamp 2021-10-03 02:49:02 is 34294489.06302264 s in the future tar: ./usr/lib/locale/aa_ER/LC_MESSAGES: time stamp 2021-10-03 02:49:02 is 34294489.06299788 s in the future tar: ./usr/lib/locale/aa_ER: time stamp 2021-10-03 02:49:02 is 34294489.0629738 s in the future tar: ./usr/lib/locale: time stamp 2021-10-03 02:49:02 is 34294489.06295136 s in the future tar: ./usr/lib/gcc/aarch64-linux-gnu/8: time stamp 2021-10-03 02:48:48 is 34294475.062926 s in the future tar: ./usr/lib/apt/planners: time stamp 2021-10-03 02:48:30 is 34294457.06288284 s in the future tar: 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is 34294466.06261724 s in the future tar: ./etc/rc0.d: time stamp 2021-10-03 02:48:39 is 34294466.06259598 s in the future tar: ./etc/alternatives: time stamp 2021-10-03 02:49:02 is 34294489.06257232 s in the future tar: ./bin: time stamp 2021-10-03 02:48:58 is 34294485.06253488 s in the future I: copying local configuration I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [libmpikmeans_1.5+dfsg-7.dsc] I: copying [./libmpikmeans_1.5+dfsg.orig.tar.gz] I: copying [./libmpikmeans_1.5+dfsg-7.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/var/lib/jenkins/.gnupg/trustedkeys.kbx': General error gpgv: Signature made Mon Feb 18 06:49:36 2019 -12 gpgv: using RSA key 419F7E9A47C3AB9519F1B0A339953A37DE4EB36B gpgv: issuer "ckk@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./libmpikmeans_1.5+dfsg-7.dsc dpkg-source: info: extracting libmpikmeans in libmpikmeans-1.5+dfsg dpkg-source: info: unpacking libmpikmeans_1.5+dfsg.orig.tar.gz dpkg-source: info: unpacking libmpikmeans_1.5+dfsg-7.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying Properly-build-shared-and-static-libraries-programs.patch dpkg-source: info: applying Drop-unused-option.patch dpkg-source: info: applying Correct-command-name-in-help.patch I: using fakeroot in build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/8600/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='arm64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=8' DISTRIBUTION='' HOME='/var/lib/jenkins' HOST_ARCH='arm64' IFS=' ' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='8600' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.m3Bbw3ydaS/pbuilderrc_WrVG --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/buster-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.m3Bbw3ydaS/b1 --logfile b1/build.log libmpikmeans_1.5+dfsg-7.dsc' SUDO_GID='117' SUDO_UID='110' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' USERNAME='root' _='/usr/bin/systemd-run' http_proxy='http://192.168.101.16:3128' I: uname -a Linux codethink-sled11-arm64 4.4.0-189-generic #219-Ubuntu SMP Tue Aug 11 12:24:40 UTC 2020 aarch64 GNU/Linux I: ls -l /bin total 4928 -rwxr-xr-x 1 root root 1216928 Apr 17 2019 bash -rwxr-xr-x 3 root root 34808 Jul 10 2019 bunzip2 -rwxr-xr-x 3 root root 34808 Jul 10 2019 bzcat lrwxrwxrwx 1 root root 6 Jul 10 2019 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2227 Jul 10 2019 bzdiff lrwxrwxrwx 1 root root 6 Jul 10 2019 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4877 Jun 24 2019 bzexe lrwxrwxrwx 1 root root 6 Jul 10 2019 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3641 Jul 10 2019 bzgrep -rwxr-xr-x 3 root root 34808 Jul 10 2019 bzip2 -rwxr-xr-x 1 root root 14264 Jul 10 2019 bzip2recover lrwxrwxrwx 1 root root 6 Jul 10 2019 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Jul 10 2019 bzmore -rwxr-xr-x 1 root root 35576 Feb 28 2019 cat -rwxr-xr-x 1 root root 60256 Feb 28 2019 chgrp -rwxr-xr-x 1 root root 56096 Feb 28 2019 chmod -rwxr-xr-x 1 root root 64368 Feb 28 2019 chown -rwxr-xr-x 1 root root 134632 Feb 28 2019 cp -rwxr-xr-x 1 root root 129536 Jan 17 2019 dash -rwxr-xr-x 1 root root 97136 Feb 28 2019 date -rwxr-xr-x 1 root root 76736 Feb 28 2019 dd -rwxr-xr-x 1 root root 93752 Feb 28 2019 df -rwxr-xr-x 1 root root 138848 Feb 28 2019 dir -rwxr-xr-x 1 root root 75984 Jan 9 2019 dmesg lrwxrwxrwx 1 root root 8 Sep 26 2018 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Sep 26 2018 domainname -> hostname -rwxr-xr-x 1 root root 31368 Feb 28 2019 echo -rwxr-xr-x 1 root root 28 Jan 7 2019 egrep -rwxr-xr-x 1 root root 27256 Feb 28 2019 false -rwxr-xr-x 1 root root 28 Jan 7 2019 fgrep -rwxr-xr-x 1 root root 68792 Jan 9 2019 findmnt -rwsr-xr-x 1 root root 34824 Apr 22 07:38 fusermount -rwxr-xr-x 1 root root 174304 Jan 7 2019 grep -rwxr-xr-x 2 root root 2345 Jan 5 2019 gunzip -rwxr-xr-x 1 root root 6375 Jan 5 2019 gzexe -rwxr-xr-x 1 root root 89656 Jan 5 2019 gzip -rwxr-xr-x 1 root root 18440 Sep 26 2018 hostname -rwxr-xr-x 1 root root 64472 Feb 28 2019 ln -rwxr-xr-x 1 root root 52544 Jul 26 2018 login -rwxr-xr-x 1 root root 138848 Feb 28 2019 ls -rwxr-xr-x 1 root root 108552 Jan 9 2019 lsblk -rwxr-xr-x 1 root root 76840 Feb 28 2019 mkdir -rwxr-xr-x 1 root root 64480 Feb 28 2019 mknod -rwxr-xr-x 1 root root 39736 Feb 28 2019 mktemp -rwxr-xr-x 1 root root 38840 Jan 9 2019 more -rwsr-xr-x 1 root root 47112 Jan 9 2019 mount -rwxr-xr-x 1 root root 14344 Jan 9 2019 mountpoint -rwxr-xr-x 1 root root 138736 Feb 28 2019 mv lrwxrwxrwx 1 root root 8 Sep 26 2018 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Feb 14 2019 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 35560 Feb 28 2019 pwd lrwxrwxrwx 1 root root 4 Apr 17 2019 rbash -> bash -rwxr-xr-x 1 root root 43712 Feb 28 2019 readlink -rwxr-xr-x 1 root root 68440 Feb 28 2019 rm -rwxr-xr-x 1 root root 39624 Feb 28 2019 rmdir -rwxr-xr-x 1 root root 19144 Jan 21 2019 run-parts -rwxr-xr-x 1 root root 114016 Dec 22 2018 sed lrwxrwxrwx 1 root root 4 Oct 3 2021 sh -> dash -rwxr-xr-x 1 root root 31384 Feb 28 2019 sleep -rwxr-xr-x 1 root root 72480 Feb 28 2019 stty -rwsr-xr-x 1 root root 59424 Jan 9 2019 su -rwxr-xr-x 1 root root 31416 Feb 28 2019 sync -rwxr-xr-x 1 root root 449416 Apr 23 2019 tar -rwxr-xr-x 1 root root 10560 Jan 21 2019 tempfile -rwxr-xr-x 1 root root 88968 Feb 28 2019 touch -rwxr-xr-x 1 root root 27256 Feb 28 2019 true -rwxr-xr-x 1 root root 14264 Apr 22 07:38 ulockmgr_server -rwsr-xr-x 1 root root 30728 Jan 9 2019 umount -rwxr-xr-x 1 root root 31384 Feb 28 2019 uname -rwxr-xr-x 2 root root 2345 Jan 5 2019 uncompress -rwxr-xr-x 1 root root 138848 Feb 28 2019 vdir -rwxr-xr-x 1 root root 34824 Jan 9 2019 wdctl -rwxr-xr-x 1 root root 946 Jan 21 2019 which lrwxrwxrwx 1 root root 8 Sep 26 2018 ypdomainname -> hostname -rwxr-xr-x 1 root root 1983 Jan 5 2019 zcat -rwxr-xr-x 1 root root 1677 Jan 5 2019 zcmp -rwxr-xr-x 1 root root 5879 Jan 5 2019 zdiff -rwxr-xr-x 1 root root 29 Jan 5 2019 zegrep -rwxr-xr-x 1 root root 29 Jan 5 2019 zfgrep -rwxr-xr-x 1 root root 2080 Jan 5 2019 zforce -rwxr-xr-x 1 root root 7584 Jan 5 2019 zgrep -rwxr-xr-x 1 root root 2205 Jan 5 2019 zless -rwxr-xr-x 1 root root 1841 Jan 5 2019 zmore -rwxr-xr-x 1 root root 4552 Jan 5 2019 znew I: user script /srv/workspace/pbuilder/8600/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: arm64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 12), dh-python, python-all-dev (>= 2.6.6-3~), cython, python-numpy, libboost-dev, libboost-filesystem-dev, libboost-program-options-dev dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19168 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 12); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-python; however: Package dh-python is not installed. pbuilder-satisfydepends-dummy depends on python-all-dev (>= 2.6.6-3~); however: Package python-all-dev is not installed. pbuilder-satisfydepends-dummy depends on cython; however: Package cython is not installed. pbuilder-satisfydepends-dummy depends on python-numpy; however: Package python-numpy is not installed. pbuilder-satisfydepends-dummy depends on libboost-dev; however: Package libboost-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-filesystem-dev; however: Package libboost-filesystem-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-program-options-dev; however: Package libboost-program-options-dev is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdmainutils{a} cython{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libblas3{a} libboost-dev{a} libboost-filesystem-dev{a} libboost-filesystem1.67-dev{a} libboost-filesystem1.67.0{a} libboost-program-options-dev{a} libboost-program-options1.67-dev{a} libboost-program-options1.67.0{a} libboost-system1.67-dev{a} libboost1.67-dev{a} libbsd0{a} libcroco3{a} libelf1{a} libexpat1{a} libexpat1-dev{a} libfile-stripnondeterminism-perl{a} libgfortran5{a} libglib2.0-0{a} libicu63{a} liblapack3{a} libmagic-mgc{a} libmagic1{a} libmpdec2{a} libncurses6{a} libpipeline1{a} libpython-all-dev{a} libpython-dev{a} libpython-stdlib{a} libpython2-dev{a} libpython2-stdlib{a} libpython2.7{a} libpython2.7-dev{a} libpython2.7-minimal{a} libpython2.7-stdlib{a} libpython3-stdlib{a} libpython3.7-minimal{a} libpython3.7-stdlib{a} libreadline7{a} libsigsegv2{a} libssl1.1{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} mime-support{a} po-debconf{a} python{a} python-all{a} python-all-dev{a} python-dev{a} python-minimal{a} python-numpy{a} python-pkg-resources{a} python2{a} python2-dev{a} python2-minimal{a} python2.7{a} python2.7-dev{a} python2.7-minimal{a} python3{a} python3-distutils{a} python3-lib2to3{a} python3-minimal{a} python3.7{a} python3.7-minimal{a} readline-common{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libglib2.0-data libgpm2 libltdl-dev libmail-sendmail-perl lynx shared-mime-info wget xdg-user-dirs 0 packages upgraded, 85 newly installed, 0 to remove and 0 not upgraded. Need to get 76.9 MB of archives. After unpacking 343 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian buster/main arm64 libbsd0 arm64 0.9.1-2 [97.4 kB] Get: 2 http://deb.debian.org/debian buster/main arm64 bsdmainutils arm64 11.1.2+b1 [185 kB] Get: 3 http://deb.debian.org/debian buster/main arm64 libuchardet0 arm64 0.0.6-3 [65.0 kB] Get: 4 http://deb.debian.org/debian buster/main arm64 groff-base arm64 1.22.4-3 [869 kB] Get: 5 http://deb.debian.org/debian buster/main arm64 libpipeline1 arm64 1.5.1-2 [29.8 kB] Get: 6 http://deb.debian.org/debian buster/main arm64 man-db arm64 2.8.5-2 [1258 kB] Get: 7 http://deb.debian.org/debian buster/main arm64 libpython2.7-minimal arm64 2.7.16-2+deb10u1 [395 kB] Get: 8 http://deb.debian.org/debian buster/main arm64 python2.7-minimal arm64 2.7.16-2+deb10u1 [1292 kB] Get: 9 http://deb.debian.org/debian buster/main arm64 python2-minimal arm64 2.7.16-1 [41.4 kB] Get: 10 http://deb.debian.org/debian buster/main arm64 python-minimal arm64 2.7.16-1 [21.0 kB] Get: 11 http://deb.debian.org/debian buster/main arm64 libssl1.1 arm64 1.1.1d-0+deb10u3 [1382 kB] Get: 12 http://deb.debian.org/debian buster/main arm64 mime-support all 3.62 [37.2 kB] Get: 13 http://deb.debian.org/debian buster/main arm64 libexpat1 arm64 2.2.6-2+deb10u1 [85.4 kB] Get: 14 http://deb.debian.org/debian buster/main arm64 readline-common all 7.0-5 [70.6 kB] Get: 15 http://deb.debian.org/debian buster/main arm64 libreadline7 arm64 7.0-5 [134 kB] Get: 16 http://deb.debian.org/debian buster/main arm64 libpython2.7-stdlib arm64 2.7.16-2+deb10u1 [1890 kB] Get: 17 http://deb.debian.org/debian buster/main arm64 python2.7 arm64 2.7.16-2+deb10u1 [305 kB] Get: 18 http://deb.debian.org/debian buster/main arm64 libpython2-stdlib arm64 2.7.16-1 [20.8 kB] Get: 19 http://deb.debian.org/debian buster/main arm64 libpython-stdlib arm64 2.7.16-1 [20.8 kB] Get: 20 http://deb.debian.org/debian buster/main arm64 python2 arm64 2.7.16-1 [41.6 kB] Get: 21 http://deb.debian.org/debian buster/main arm64 python arm64 2.7.16-1 [22.8 kB] Get: 22 http://deb.debian.org/debian buster/main arm64 libpython3.7-minimal arm64 3.7.3-2+deb10u2 [588 kB] Get: 23 http://deb.debian.org/debian buster/main arm64 python3.7-minimal arm64 3.7.3-2+deb10u2 [1404 kB] Get: 24 http://deb.debian.org/debian buster/main arm64 python3-minimal arm64 3.7.3-1 [36.6 kB] Get: 25 http://deb.debian.org/debian buster/main arm64 libmpdec2 arm64 2.4.2-2 [77.7 kB] Get: 26 http://deb.debian.org/debian buster/main arm64 libpython3.7-stdlib arm64 3.7.3-2+deb10u2 [1641 kB] Get: 27 http://deb.debian.org/debian buster/main arm64 python3.7 arm64 3.7.3-2+deb10u2 [330 kB] Get: 28 http://deb.debian.org/debian buster/main arm64 libpython3-stdlib arm64 3.7.3-1 [20.0 kB] Get: 29 http://deb.debian.org/debian buster/main arm64 python3 arm64 3.7.3-1 [61.5 kB] Get: 30 http://deb.debian.org/debian buster/main arm64 sensible-utils all 0.0.12 [15.8 kB] Get: 31 http://deb.debian.org/debian buster/main arm64 libmagic-mgc arm64 1:5.35-4+deb10u1 [242 kB] Get: 32 http://deb.debian.org/debian buster/main arm64 libmagic1 arm64 1:5.35-4+deb10u1 [115 kB] Get: 33 http://deb.debian.org/debian buster/main arm64 file arm64 1:5.35-4+deb10u1 [66.4 kB] Get: 34 http://deb.debian.org/debian buster/main arm64 gettext-base arm64 0.19.8.1-9 [120 kB] Get: 35 http://deb.debian.org/debian buster/main arm64 libsigsegv2 arm64 2.12-2 [32.3 kB] Get: 36 http://deb.debian.org/debian buster/main arm64 m4 arm64 1.4.18-2 [198 kB] Get: 37 http://deb.debian.org/debian buster/main arm64 autoconf all 2.69-11 [341 kB] Get: 38 http://deb.debian.org/debian buster/main arm64 autotools-dev all 20180224.1 [77.0 kB] Get: 39 http://deb.debian.org/debian buster/main arm64 automake all 1:1.16.1-4 [771 kB] Get: 40 http://deb.debian.org/debian buster/main arm64 autopoint all 0.19.8.1-9 [434 kB] Get: 41 http://deb.debian.org/debian buster/main arm64 cython arm64 0.29.2-2 [1244 kB] Get: 42 http://deb.debian.org/debian buster/main arm64 libtool all 2.4.6-9 [547 kB] Get: 43 http://deb.debian.org/debian buster/main arm64 dh-autoreconf all 19 [16.9 kB] Get: 44 http://deb.debian.org/debian buster/main arm64 libarchive-zip-perl all 1.64-1 [96.8 kB] Get: 45 http://deb.debian.org/debian buster/main arm64 libfile-stripnondeterminism-perl all 1.1.2-1 [19.8 kB] Get: 46 http://deb.debian.org/debian buster/main arm64 dh-strip-nondeterminism all 1.1.2-1 [13.0 kB] Get: 47 http://deb.debian.org/debian buster/main arm64 libelf1 arm64 0.176-1.1 [160 kB] Get: 48 http://deb.debian.org/debian buster/main arm64 dwz arm64 0.12-3 [71.7 kB] Get: 49 http://deb.debian.org/debian buster/main arm64 libglib2.0-0 arm64 2.58.3-2+deb10u2 [1185 kB] Get: 50 http://deb.debian.org/debian buster/main arm64 libicu63 arm64 63.1-6+deb10u1 [8151 kB] Get: 51 http://deb.debian.org/debian buster/main arm64 libxml2 arm64 2.9.4+dfsg1-7+b3 [623 kB] Get: 52 http://deb.debian.org/debian buster/main arm64 libcroco3 arm64 0.6.12-3 [140 kB] Get: 53 http://deb.debian.org/debian buster/main arm64 libncurses6 arm64 6.1+20181013-2+deb10u2 [92.6 kB] Get: 54 http://deb.debian.org/debian buster/main arm64 gettext arm64 0.19.8.1-9 [1261 kB] Get: 55 http://deb.debian.org/debian buster/main arm64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get: 56 http://deb.debian.org/debian buster/main arm64 po-debconf all 1.0.21 [248 kB] Get: 57 http://deb.debian.org/debian buster/main arm64 debhelper all 12.1.1 [1016 kB] Get: 58 http://deb.debian.org/debian buster/main arm64 python3-lib2to3 all 3.7.3-1 [76.7 kB] Get: 59 http://deb.debian.org/debian buster/main arm64 python3-distutils all 3.7.3-1 [142 kB] Get: 60 http://deb.debian.org/debian buster/main arm64 dh-python all 3.20190308 [99.3 kB] Get: 61 http://deb.debian.org/debian buster/main arm64 libgfortran5 arm64 8.3.0-6 [298 kB] Get: 62 http://deb.debian.org/debian buster/main arm64 libblas3 arm64 3.8.0-2 [100 kB] Get: 63 http://deb.debian.org/debian buster/main arm64 libboost1.67-dev arm64 1.67.0-13+deb10u1 [8388 kB] Get: 64 http://deb.debian.org/debian buster/main arm64 libboost-dev arm64 1.67.0.1 [3864 B] Get: 65 http://deb.debian.org/debian buster/main arm64 libboost-filesystem1.67.0 arm64 1.67.0-13+deb10u1 [257 kB] Get: 66 http://deb.debian.org/debian buster/main arm64 libboost-system1.67-dev arm64 1.67.0-13+deb10u1 [231 kB] Get: 67 http://deb.debian.org/debian buster/main arm64 libboost-filesystem1.67-dev arm64 1.67.0-13+deb10u1 [267 kB] Get: 68 http://deb.debian.org/debian buster/main arm64 libboost-filesystem-dev arm64 1.67.0.1 [3684 B] Get: 69 http://deb.debian.org/debian buster/main arm64 libboost-program-options1.67.0 arm64 1.67.0-13+deb10u1 [346 kB] Get: 70 http://deb.debian.org/debian buster/main arm64 libboost-program-options1.67-dev arm64 1.67.0-13+deb10u1 [384 kB] Get: 71 http://deb.debian.org/debian buster/main arm64 libboost-program-options-dev arm64 1.67.0.1 [3656 B] Get: 72 http://deb.debian.org/debian buster/main arm64 libexpat1-dev arm64 2.2.6-2+deb10u1 [128 kB] Get: 73 http://deb.debian.org/debian buster/main arm64 liblapack3 arm64 3.8.0-2 [1489 kB] Get: 74 http://deb.debian.org/debian buster/main arm64 libpython2.7 arm64 2.7.16-2+deb10u1 [958 kB] Get: 75 http://deb.debian.org/debian buster/main arm64 libpython2.7-dev arm64 2.7.16-2+deb10u1 [31.5 MB] Get: 76 http://deb.debian.org/debian buster/main arm64 libpython2-dev arm64 2.7.16-1 [20.9 kB] Get: 77 http://deb.debian.org/debian buster/main arm64 libpython-dev arm64 2.7.16-1 [20.9 kB] Get: 78 http://deb.debian.org/debian buster/main arm64 libpython-all-dev arm64 2.7.16-1 [1064 B] Get: 79 http://deb.debian.org/debian buster/main arm64 python-all arm64 2.7.16-1 [1044 B] Get: 80 http://deb.debian.org/debian buster/main arm64 python2.7-dev arm64 2.7.16-2+deb10u1 [296 kB] Get: 81 http://deb.debian.org/debian buster/main arm64 python2-dev arm64 2.7.16-1 [1216 B] Get: 82 http://deb.debian.org/debian buster/main arm64 python-dev arm64 2.7.16-1 [1192 B] Get: 83 http://deb.debian.org/debian buster/main arm64 python-all-dev arm64 2.7.16-1 [1068 B] Get: 84 http://deb.debian.org/debian buster/main arm64 python-pkg-resources all 40.8.0-1 [182 kB] Get: 85 http://deb.debian.org/debian buster/main arm64 python-numpy arm64 1:1.16.2-1 [1975 kB] Fetched 76.9 MB in 9s (8959 kB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libbsd0:arm64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19168 files and directories currently installed.) Preparing to unpack .../00-libbsd0_0.9.1-2_arm64.deb ... Unpacking libbsd0:arm64 (0.9.1-2) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../01-bsdmainutils_11.1.2+b1_arm64.deb ... Unpacking bsdmainutils (11.1.2+b1) ... Selecting previously unselected package libuchardet0:arm64. Preparing to unpack .../02-libuchardet0_0.0.6-3_arm64.deb ... Unpacking libuchardet0:arm64 (0.0.6-3) ... Selecting previously unselected package groff-base. Preparing to unpack .../03-groff-base_1.22.4-3_arm64.deb ... Unpacking groff-base (1.22.4-3) ... Selecting previously unselected package libpipeline1:arm64. Preparing to unpack .../04-libpipeline1_1.5.1-2_arm64.deb ... Unpacking libpipeline1:arm64 (1.5.1-2) ... Selecting previously unselected package man-db. Preparing to unpack .../05-man-db_2.8.5-2_arm64.deb ... Unpacking man-db (2.8.5-2) ... Selecting previously unselected package libpython2.7-minimal:arm64. Preparing to unpack .../06-libpython2.7-minimal_2.7.16-2+deb10u1_arm64.deb ... Unpacking libpython2.7-minimal:arm64 (2.7.16-2+deb10u1) ... Selecting previously unselected package python2.7-minimal. Preparing to unpack .../07-python2.7-minimal_2.7.16-2+deb10u1_arm64.deb ... Unpacking python2.7-minimal (2.7.16-2+deb10u1) ... Selecting previously unselected package python2-minimal. 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Setting up libmagic1:arm64 (1:5.35-4+deb10u1) ... Setting up gettext-base (0.19.8.1-9) ... Setting up file (1:5.35-4+deb10u1) ... Setting up libicu63:arm64 (63.1-6+deb10u1) ... Setting up autotools-dev (20180224.1) ... Setting up libexpat1-dev:arm64 (2.2.6-2+deb10u1) ... Setting up libboost-program-options-dev:arm64 (1.67.0.1) ... Setting up libncurses6:arm64 (6.1+20181013-2+deb10u2) ... Setting up libsigsegv2:arm64 (2.12-2) ... Setting up autopoint (0.19.8.1-9) ... Setting up libgfortran5:arm64 (8.3.0-6) ... Setting up sensible-utils (0.0.12) ... Setting up libuchardet0:arm64 (0.0.6-3) ... Setting up libboost-filesystem1.67.0:arm64 (1.67.0-13+deb10u1) ... Setting up libboost-system1.67-dev:arm64 (1.67.0-13+deb10u1) ... Setting up libboost-dev:arm64 (1.67.0.1) ... Setting up libmpdec2:arm64 (2.4.2-2) ... Setting up libbsd0:arm64 (0.9.1-2) ... Setting up libelf1:arm64 (0.176-1.1) ... Setting up readline-common (7.0-5) ... Setting up libxml2:arm64 (2.9.4+dfsg1-7+b3) ... Setting up libreadline7:arm64 (7.0-5) ... Setting up libfile-stripnondeterminism-perl (1.1.2-1) ... Setting up libpython3.7-stdlib:arm64 (3.7.3-2+deb10u2) ... Setting up libboost-filesystem1.67-dev:arm64 (1.67.0-13+deb10u1) ... Setting up libtool (2.4.6-9) ... Setting up m4 (1.4.18-2) ... Setting up libpython2.7-stdlib:arm64 (2.7.16-2+deb10u1) ... Setting up libblas3:arm64 (3.8.0-2) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/aarch64-linux-gnu/libblas.so.3 (libblas.so.3-aarch64-linux-gnu) in auto mode Setting up bsdmainutils (11.1.2+b1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libcroco3:arm64 (0.6.12-3) ... Setting up autoconf (2.69-11) ... Setting up dwz (0.12-3) ... Setting up groff-base (1.22.4-3) ... Setting up libboost-filesystem-dev:arm64 (1.67.0.1) ... Setting up libpython3-stdlib:arm64 (3.7.3-1) ... Setting up automake (1:1.16.1-4) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up python3.7 (3.7.3-2+deb10u2) ... Setting up libpython2.7:arm64 (2.7.16-2+deb10u1) ... Setting up liblapack3:arm64 (3.8.0-2) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/aarch64-linux-gnu/liblapack.so.3 (liblapack.so.3-aarch64-linux-gnu) in auto mode Setting up libpython2.7-dev:arm64 (2.7.16-2+deb10u1) ... Setting up gettext (0.19.8.1-9) ... Setting up python2.7 (2.7.16-2+deb10u1) ... Setting up libpython2-stdlib:arm64 (2.7.16-1) ... Setting up python3 (3.7.3-1) ... Setting up man-db (2.8.5-2) ... Not building database; man-db/auto-update is not 'true'. Setting up python2 (2.7.16-1) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up libpython-stdlib:arm64 (2.7.16-1) ... Setting up libpython2-dev:arm64 (2.7.16-1) ... Setting up python3-lib2to3 (3.7.3-1) ... Setting up python (2.7.16-1) ... Setting up python2.7-dev (2.7.16-2+deb10u1) ... Setting up python3-distutils (3.7.3-1) ... Setting up dh-python (3.20190308) ... Setting up cython (0.29.2-2) ... Setting up python2-dev (2.7.16-1) ... Setting up python-pkg-resources (40.8.0-1) ... Setting up po-debconf (1.0.21) ... Setting up python-all (2.7.16-1) ... Setting up libpython-dev:arm64 (2.7.16-1) ... Setting up python-dev (2.7.16-1) ... Setting up libpython-all-dev:arm64 (2.7.16-1) ... Setting up python-numpy (1:1.16.2-1) ... Setting up python-all-dev (2.7.16-1) ... Setting up debhelper (12.1.1) ... Setting up dh-autoreconf (19) ... Setting up dh-strip-nondeterminism (1.1.2-1) ... Processing triggers for libc-bin (2.28-10) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps Reading package lists... Building dependency tree... Reading state information... fakeroot is already the newest version (1.23-1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package I: Running cd /build/libmpikmeans-1.5+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b dpkg-buildpackage: info: source package libmpikmeans dpkg-buildpackage: info: source version 1.5+dfsg-7 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Christian Kastner dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 fakeroot debian/rules clean dh clean --with python2 pyversions: missing X(S)-Python-Version in control file, fall back to debian/pyversions pyversions: missing debian/pyversions file, fall back to supported versions dh_auto_clean make -j8 clean make[1]: Entering directory '/build/libmpikmeans-1.5+dfsg' rm -f *.o rm -f *.mexglx rm -f *.mexa64 rm -f libmpikmeans.so* rm -f libmpikmeans.a rm -rf py_kmeans.c python-build rm -f mpi_assign mpi_kmeans make[1]: Leaving directory '/build/libmpikmeans-1.5+dfsg' dh_clean debian/rules build dh build --with python2 pyversions: missing X(S)-Python-Version in control file, fall back to debian/pyversions pyversions: missing debian/pyversions file, fall back to supported versions dh_update_autotools_config dh_autoreconf dh_auto_configure debian/rules override_dh_auto_build make[1]: Entering directory '/build/libmpikmeans-1.5+dfsg' pyversions: missing X(S)-Python-Version in control file, fall back to debian/pyversions pyversions: missing debian/pyversions file, fall back to supported versions make lib pyversions: missing X(S)-Python-Version in control file, fall back to debian/pyversions pyversions: missing debian/pyversions file, fall back to supported versions make[2]: Entering directory '/build/libmpikmeans-1.5+dfsg' g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libmpikmeans-1.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wno-unused -fPIC -Wl,-z,relro -Wl,-z,now -shared \ -Wl,-soname=libmpikmeans.so.1 \ -o libmpikmeans.so.1.5 \ mpi_kmeans.cxx ln -s libmpikmeans.so.1.5 libmpikmeans.so.1 ln -s libmpikmeans.so.1 libmpikmeans.so g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libmpikmeans-1.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wno-unused -Wl,-z,relro -Wl,-z,now -c -o libmpikmeans-static.o mpi_kmeans.cxx ar cru libmpikmeans.a libmpikmeans-static.o ar: `u' modifier ignored since `D' is the default (see `U') make[2]: Leaving directory '/build/libmpikmeans-1.5+dfsg' make standalone make[2]: Entering directory '/build/libmpikmeans-1.5+dfsg' g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libmpikmeans-1.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wno-unused -Wl,-z,relro -Wl,-z,now -L. -Wl,--as-needed -o mpi_kmeans mpi_kmeans_main.cxx -lmpikmeans -lboost_system -lboost_program_options -lboost_filesystem g++ -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/libmpikmeans-1.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wno-unused -Wl,-z,relro -Wl,-z,now -L. -Wl,--as-needed -o mpi_assign mpi_assign_main.cxx -lmpikmeans -lboost_system -lboost_program_options -lboost_filesystem mpi_assign_main.cxx: In function 'int main(int, char**)': mpi_assign_main.cxx:173:27: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare] for (unsigned int i=0; i < nof_points ; i++ ) { ~~^~~~~~~~~~~~ make[2]: Leaving directory '/build/libmpikmeans-1.5+dfsg' for py in 2.7; do \ PYVER=$py make python; \ done make[2]: Entering directory '/build/libmpikmeans-1.5+dfsg' cython py_kmeans.pyx /usr/lib/python2.7/dist-packages/Cython/Compiler/Main.py:367: FutureWarning: Cython directive 'language_level' not set, using 2 for now (Py2). This will change in a later release! File: /build/libmpikmeans-1.5+dfsg/py_kmeans.pyx tree = Parsing.p_module(s, pxd, full_module_name) mkdir -p python-build/python2.7 g++ -g -O2 -ffile-prefix-map=/build/libmpikmeans-1.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wno-unused -Wdate-time -D_FORTIFY_SOURCE=2 -c -I/usr/include/python2.7 \ -pthread -fPIC -o py_kmeans.o py_kmeans.c In file included from /usr/include/python2.7/numpy/ndarraytypes.h:1822, from /usr/include/python2.7/numpy/ndarrayobject.h:12, from /usr/include/python2.7/numpy/arrayobject.h:4, from py_kmeans.c:613: /usr/include/python2.7/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ In file included from /usr/include/python2.7/Python.h:83, from py_kmeans.c:4: py_kmeans.c: In function 'PyObject* __Pyx_PyBool_FromLong(long int)': /usr/include/python2.7/object.h:769:6: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] ((PyObject*)(op))->ob_refcnt++) ~^~~~~~~~~~~~~~~~ py_kmeans.c:701:28: note: in expansion of macro 'Py_INCREF' #define __Pyx_NewRef(obj) (Py_INCREF(obj), obj) ^~~~~~~~~ py_kmeans.c:9203:14: note: in expansion of macro '__Pyx_NewRef' return b ? __Pyx_NewRef(Py_True) : __Pyx_NewRef(Py_False); ^~~~~~~~~~~~ /usr/include/python2.7/object.h:769:6: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] ((PyObject*)(op))->ob_refcnt++) ~^~~~~~~~~~~~~~~~ py_kmeans.c:701:28: note: in expansion of macro 'Py_INCREF' #define __Pyx_NewRef(obj) (Py_INCREF(obj), obj) ^~~~~~~~~ py_kmeans.c:9203:38: note: in expansion of macro '__Pyx_NewRef' return b ? __Pyx_NewRef(Py_True) : __Pyx_NewRef(Py_False); ^~~~~~~~~~~~ g++ -g -O2 -ffile-prefix-map=/build/libmpikmeans-1.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wno-unused -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -pthread -shared -Wl,--as-needed \ -lpython2.7 -L. -lmpikmeans \ -o python-build/python2.7/py_kmeans.so py_kmeans.o make[2]: Leaving directory '/build/libmpikmeans-1.5+dfsg' make[1]: Leaving directory '/build/libmpikmeans-1.5+dfsg' dh_auto_test create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary dh binary --with python2 pyversions: missing X(S)-Python-Version in control file, fall back to debian/pyversions pyversions: missing debian/pyversions file, fall back to supported versions dh_testroot dh_prep debian/rules override_dh_auto_install make[1]: Entering directory '/build/libmpikmeans-1.5+dfsg' dh_auto_install -- libdir=/usr/lib/aarch64-linux-gnu/ pyversions: missing X(S)-Python-Version in control file, fall back to debian/pyversions pyversions: missing debian/pyversions file, fall back to supported versions make -j8 install DESTDIR=/build/libmpikmeans-1.5\+dfsg/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" libdir=/usr/lib/aarch64-linux-gnu/ make[2]: Entering directory '/build/libmpikmeans-1.5+dfsg' mkdir -p python-build/python2.7 g++ -g -O2 -ffile-prefix-map=/build/libmpikmeans-1.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wno-unused -Wdate-time -D_FORTIFY_SOURCE=2 -c -I/usr/include/python2.7 \ -pthread -fPIC -o py_kmeans.o py_kmeans.c In file included from /usr/include/python2.7/numpy/ndarraytypes.h:1822, from /usr/include/python2.7/numpy/ndarrayobject.h:12, from /usr/include/python2.7/numpy/arrayobject.h:4, from py_kmeans.c:613: /usr/include/python2.7/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp] #warning "Using deprecated NumPy API, disable it with " \ ^~~~~~~ In file included from /usr/include/python2.7/Python.h:83, from py_kmeans.c:4: py_kmeans.c: In function 'PyObject* __Pyx_PyBool_FromLong(long int)': /usr/include/python2.7/object.h:769:6: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] ((PyObject*)(op))->ob_refcnt++) ~^~~~~~~~~~~~~~~~ py_kmeans.c:701:28: note: in expansion of macro 'Py_INCREF' #define __Pyx_NewRef(obj) (Py_INCREF(obj), obj) ^~~~~~~~~ py_kmeans.c:9203:14: note: in expansion of macro '__Pyx_NewRef' return b ? __Pyx_NewRef(Py_True) : __Pyx_NewRef(Py_False); ^~~~~~~~~~~~ /usr/include/python2.7/object.h:769:6: warning: dereferencing type-punned pointer will break strict-aliasing rules [-Wstrict-aliasing] ((PyObject*)(op))->ob_refcnt++) ~^~~~~~~~~~~~~~~~ py_kmeans.c:701:28: note: in expansion of macro 'Py_INCREF' #define __Pyx_NewRef(obj) (Py_INCREF(obj), obj) ^~~~~~~~~ py_kmeans.c:9203:38: note: in expansion of macro '__Pyx_NewRef' return b ? __Pyx_NewRef(Py_True) : __Pyx_NewRef(Py_False); ^~~~~~~~~~~~ g++ -g -O2 -ffile-prefix-map=/build/libmpikmeans-1.5+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -Wno-unused -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -pthread -shared -Wl,--as-needed \ -lpython2.7 -L. -lmpikmeans \ -o python-build/python2.7/py_kmeans.so py_kmeans.o install -d /build/libmpikmeans-1.5+dfsg/debian/tmp/usr/bin/ /build/libmpikmeans-1.5+dfsg/debian/tmp/usr/lib/aarch64-linux-gnu/ install mpi_kmeans mpi_assign -m 755 /build/libmpikmeans-1.5+dfsg/debian/tmp/usr/bin/ install libmpikmeans.a -m 644 /build/libmpikmeans-1.5+dfsg/debian/tmp/usr/lib/aarch64-linux-gnu/ install libmpikmeans.so.1.5 -m 644 /build/libmpikmeans-1.5+dfsg/debian/tmp/usr/lib/aarch64-linux-gnu/ cd /build/libmpikmeans-1.5+dfsg/debian/tmp/usr/lib/aarch64-linux-gnu/ && ln -s libmpikmeans.so.1.5 libmpikmeans.so.1 cd /build/libmpikmeans-1.5+dfsg/debian/tmp/usr/lib/aarch64-linux-gnu/ && ln -s libmpikmeans.so.1 libmpikmeans.so make[2]: Leaving directory '/build/libmpikmeans-1.5+dfsg' make[1]: Leaving directory '/build/libmpikmeans-1.5+dfsg' dh_install dh_installdocs dh_installchangelogs dh_installexamples dh_installman dh_python2 dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_missing: usr/bin/mpi_assign exists in debian/tmp but is not installed to anywhere dh_missing: usr/bin/mpi_kmeans exists in debian/tmp but is not installed to anywhere The following debhelper tools have reported what they installed (with files per package) * dh_install: libmpikmeans-dev (3), libmpikmeans1 (2), mpikmeans-tools (2), python-mpikmeans (2) * dh_installdocs: libmpikmeans-dev (0), libmpikmeans1 (1), mpikmeans-tools (0), python-mpikmeans (0) * dh_installexamples: libmpikmeans-dev (0), libmpikmeans1 (0), mpikmeans-tools (1), python-mpikmeans (0) * dh_installman: libmpikmeans-dev (0), libmpikmeans1 (0), mpikmeans-tools (2), python-mpikmeans (0) If the missing files are installed by another tool, please file a bug against it. When filing the report, if the tool is not part of debhelper itself, please reference the "Logging helpers and dh_missing" section from the "PROGRAMMING" guide for debhelper (10.6.3+). (in the debhelper package: /usr/share/doc/debhelper/PROGRAMMING.gz) Be sure to test with dpkg-buildpackage -A/-B as the results may vary when only a subset is built For a short-term work-around: Add the files to debian/not-installed dh_dwz dh_strip dh_makeshlibs dh_shlibdeps dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/libmpikmeans1/usr/lib/aarch64-linux-gnu/libmpikmeans.so.1.5 was not linked against libstdc++.so.6 (it uses none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/libmpikmeans1/usr/lib/aarch64-linux-gnu/libmpikmeans.so.1.5 was not linked against libgcc_s.so.1 (it uses none of the library's symbols) dh_installdeb dh_gencontrol dpkg-gencontrol: warning: package python-mpikmeans: substitution variable ${python:Provides} unused, but is defined dpkg-gencontrol: warning: package python-mpikmeans: substitution variable ${python:Versions} unused, but is defined dpkg-gencontrol: warning: package python-mpikmeans: substitution variable ${python:Provides} unused, but is defined dpkg-gencontrol: warning: package python-mpikmeans: substitution variable ${python:Versions} unused, but is defined dh_md5sums dh_builddeb dpkg-deb: building package 'libmpikmeans1' in '../libmpikmeans1_1.5+dfsg-7_arm64.deb'. dpkg-deb: building package 'libmpikmeans-dev' in '../libmpikmeans-dev_1.5+dfsg-7_arm64.deb'. dpkg-deb: building package 'libmpikmeans1-dbgsym' in '../libmpikmeans1-dbgsym_1.5+dfsg-7_arm64.deb'. dpkg-deb: building package 'mpikmeans-tools' in '../mpikmeans-tools_1.5+dfsg-7_arm64.deb'. dpkg-deb: building package 'mpikmeans-tools-dbgsym' in '../mpikmeans-tools-dbgsym_1.5+dfsg-7_arm64.deb'. dpkg-deb: building package 'python-mpikmeans-dbgsym' in '../python-mpikmeans-dbgsym_1.5+dfsg-7_arm64.deb'. dpkg-deb: building package 'python-mpikmeans' in '../python-mpikmeans_1.5+dfsg-7_arm64.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../libmpikmeans_1.5+dfsg-7_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/8600 and its subdirectories I: Current time: Tue Sep 1 04:37:43 -12 2020 I: pbuilder-time-stamp: 1598978263 Tue Sep 1 16:37:48 UTC 2020 I: 1st build successful. Starting 2nd build on remote node codethink-sled12-arm64.debian.net. Tue Sep 1 16:37:48 UTC 2020 I: Preparing to do remote build '2' on codethink-sled12-arm64.debian.net. Tue Sep 1 16:39:36 UTC 2020 I: Deleting $TMPDIR on codethink-sled12-arm64.debian.net. Tue Sep 1 16:39:37 UTC 2020 I: libmpikmeans_1.5+dfsg-7_arm64.changes: Format: 1.8 Date: Mon, 18 Feb 2019 19:47:28 +0100 Source: libmpikmeans Binary: libmpikmeans-dev libmpikmeans1 libmpikmeans1-dbgsym mpikmeans-tools mpikmeans-tools-dbgsym python-mpikmeans python-mpikmeans-dbgsym Architecture: arm64 Version: 1.5+dfsg-7 Distribution: unstable Urgency: medium Maintainer: Christian Kastner Changed-By: Christian Kastner Description: libmpikmeans-dev - Development libraries and header files for MPIKmeans libmpikmeans1 - Fast Library for k-means Clustering mpikmeans-tools - Standalone applications for MPIKmeans python-mpikmeans - Python bindings for MPIKmeans Changes: libmpikmeans (1.5+dfsg-7) unstable; urgency=medium . * Correct broken Vcs-* fields (copy-pasta) * Drop d/*.dirs, the dh_* helpers create directories as needed * Move our custom manpages from d/ to d/man/ * d/source/lintian-overrides: - Fix syntax issue - Add tag debian-watch-file-is-missing Upstream only provides a link to the current, unversioned download * gbp.conf: Get rid of the 'dfsg' branch Until now, the original upstream source was on branch 'upstream' and the DFSG-cleaned source on branch 'dfsg'. This has little to no benefit, but many downsides: it departs from common Debian workflows, and also represents extra maintenance work Checksums-Sha1: 4c32f7d46693304a3892fd5156aa6057e255200e 10772 libmpikmeans-dev_1.5+dfsg-7_arm64.deb 0ed18e2880972b3cb9f0fb862bf911d2eab9ebd8 21884 libmpikmeans1-dbgsym_1.5+dfsg-7_arm64.deb 95fd741be57aee90d52a44e4c4dabbbdc3808d37 12328 libmpikmeans1_1.5+dfsg-7_arm64.deb a2dfebc0cf582bc1b2365d118f5351313b377983 7938 libmpikmeans_1.5+dfsg-7_arm64.buildinfo 8128492007382d65707189b3d9e973645c90c61e 574136 mpikmeans-tools-dbgsym_1.5+dfsg-7_arm64.deb 753b6032752ecfefbfbf55ea240c958586027800 42284 mpikmeans-tools_1.5+dfsg-7_arm64.deb 3d2a1eaea25aae26752dbbc8c322189a4e382dc5 102696 python-mpikmeans-dbgsym_1.5+dfsg-7_arm64.deb 3510ea6ec42e6186c48aa9987978f09d5879e850 29124 python-mpikmeans_1.5+dfsg-7_arm64.deb Checksums-Sha256: fbc0fc9d101d60ab4220623ce12353360d1521e5f27cfd44ee2d190d7156c663 10772 libmpikmeans-dev_1.5+dfsg-7_arm64.deb f02394b4e7c92b1ed2a1b488cffb46f2ba8c60d8efca5870e2cd9c0702e28150 21884 libmpikmeans1-dbgsym_1.5+dfsg-7_arm64.deb 1c5cf27219035684c2ef287503c5d81427fc0916df39d4827d39b1cd6c55e6a5 12328 libmpikmeans1_1.5+dfsg-7_arm64.deb a2b86799e76961694ec0d4de30d2a7faa96395a8b43382685d23a75ee30fbafa 7938 libmpikmeans_1.5+dfsg-7_arm64.buildinfo f97f571b0977a83a326d8110c93eadfa1bcd4f02f6f1d6fd15df0055bc0463db 574136 mpikmeans-tools-dbgsym_1.5+dfsg-7_arm64.deb fef07dc9641749479f7575f82f6e84419f706a592ba056df01774953c2f3b9e5 42284 mpikmeans-tools_1.5+dfsg-7_arm64.deb a084df1b86ede7d7c6ef511de78c5a0f3981ad80f407cb0556109f2907b924e0 102696 python-mpikmeans-dbgsym_1.5+dfsg-7_arm64.deb 5f888120bdcc32596610de518c54664b51945e1ddde6aee811da3cb8b142781f 29124 python-mpikmeans_1.5+dfsg-7_arm64.deb Files: 0efeaf58a7502a6acb3a7cf17e085599 10772 libdevel optional libmpikmeans-dev_1.5+dfsg-7_arm64.deb e18d26222ab9ad53ae7041a5776ba213 21884 debug optional libmpikmeans1-dbgsym_1.5+dfsg-7_arm64.deb a218cfc6b0de0ec55fdfc09d7b685f8a 12328 libs optional libmpikmeans1_1.5+dfsg-7_arm64.deb 8743987618637a8fee86a87069b124ec 7938 libs optional libmpikmeans_1.5+dfsg-7_arm64.buildinfo b88dff26e8d6e2e9a282b9929f6fe28f 574136 debug optional mpikmeans-tools-dbgsym_1.5+dfsg-7_arm64.deb d1bf075127841b5a1fb0661b887b5768 42284 libs optional mpikmeans-tools_1.5+dfsg-7_arm64.deb 0b915c323e2ffb4984e50684d370dfd1 102696 debug optional python-mpikmeans-dbgsym_1.5+dfsg-7_arm64.deb 6218337fa9a64a8e6589392022cf5e07 29124 python optional python-mpikmeans_1.5+dfsg-7_arm64.deb Tue Sep 1 16:39:48 UTC 2020 I: diffoscope 158 will be used to compare the two builds: # Profiling output for: /usr/bin/diffoscope --html /srv/reproducible-results/rbuild-debian/tmp.m3Bbw3ydaS/libmpikmeans_1.5+dfsg-7.diffoscope.html --text /srv/reproducible-results/rbuild-debian/tmp.m3Bbw3ydaS/libmpikmeans_1.5+dfsg-7.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/tmp.m3Bbw3ydaS/libmpikmeans_1.5+dfsg-7.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/tmp.m3Bbw3ydaS/b1/libmpikmeans_1.5+dfsg-7_arm64.changes /srv/reproducible-results/rbuild-debian/tmp.m3Bbw3ydaS/b2/libmpikmeans_1.5+dfsg-7_arm64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.262s) 0.262s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.050s) 0.050s 10 calls diffoscope.comparators.binary.FilesystemFile 0.000s 8 calls abc.DotChangesFile Tue Sep 1 16:40:11 UTC 2020 I: diffoscope 158 found no differences in the changes files, and a .buildinfo file also exists. Tue Sep 1 16:40:11 UTC 2020 I: libmpikmeans from buster built successfully and reproducibly on arm64. Tue Sep 1 16:40:12 UTC 2020 I: Submitting .buildinfo files to external archives: Tue Sep 1 16:40:12 UTC 2020 I: Submitting 12K b1/libmpikmeans_1.5+dfsg-7_arm64.buildinfo.asc Tue Sep 1 16:40:14 UTC 2020 I: Submitting 12K b2/libmpikmeans_1.5+dfsg-7_arm64.buildinfo.asc Tue Sep 1 16:40:15 UTC 2020 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Tue Sep 1 16:40:15 UTC 2020 I: Done submitting .buildinfo files. Tue Sep 1 16:40:15 UTC 2020 I: Removing signed libmpikmeans_1.5+dfsg-7_arm64.buildinfo.asc files: removed './b1/libmpikmeans_1.5+dfsg-7_arm64.buildinfo.asc' removed './b2/libmpikmeans_1.5+dfsg-7_arm64.buildinfo.asc'