Tue Oct 12 08:42:19 UTC 2021 I: starting to build transrate-tools/buster/amd64 on jenkins on '2021-10-12 08:41' Tue Oct 12 08:42:19 UTC 2021 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/amd64_11/89140/console.log Tue Oct 12 08:42:19 UTC 2021 I: Downloading source for buster/transrate-tools=1.0.0-2 --2021-10-12 08:42:19-- http://deb.debian.org/debian/pool/main/t/transrate-tools/transrate-tools_1.0.0-2.dsc Connecting to 78.137.99.97:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2075 (2.0K) Saving to: ‘transrate-tools_1.0.0-2.dsc’ 0K .. 100% 178M=0s 2021-10-12 08:42:19 (178 MB/s) - ‘transrate-tools_1.0.0-2.dsc’ saved [2075/2075] Tue Oct 12 08:42:20 UTC 2021 I: transrate-tools_1.0.0-2.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: transrate-tools Binary: transrate-tools Architecture: any Version: 1.0.0-2 Maintainer: Debian Med Packaging Team Uploaders: Michael R. Crusoe Homepage: http://hibberdlab.com/transrate/ Standards-Version: 4.1.4 Vcs-Browser: https://salsa.debian.org/med-team/transrate-tools Vcs-Git: https://salsa.debian.org/med-team/transrate-tools.git Build-Depends: debhelper (>= 11~), cmake, libbamtools-dev (>= 2.4+dfsg-1~), zlib1g-dev, help2man Package-List: transrate-tools deb science optional arch=any Checksums-Sha1: 84309a45a9770a22e4ef41a2930f9fb815c0b9fb 6167 transrate-tools_1.0.0.orig.tar.gz 073d5de62fd0fc69dc67ebd813d076a7add78a7a 3464 transrate-tools_1.0.0-2.debian.tar.xz Checksums-Sha256: cdaac24be4f9ad9caf36834e2bc464758afcb5e746c6e9851255c7ac92fad898 6167 transrate-tools_1.0.0.orig.tar.gz 7958959fba7fa84871435e877c16cc2e201d21397ae7dc31e2ea907acf8a4dd9 3464 transrate-tools_1.0.0-2.debian.tar.xz Files: 76344f9a81b1fb7b9387306c5d6f0c63 6167 transrate-tools_1.0.0.orig.tar.gz f33a93633b95d027b86180a2541bd4c4 3464 transrate-tools_1.0.0-2.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAls8YRoRHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtGD3A//bApX+Lcb+NtmEvHK1atZSsAHoP7rM1Q1 tWMQYwAABBBsxnyTmy7ByrjROwsRDnK0693N28pcm8qULX/h732SAp9vUBUQuU7r qWsdNI55o05LVmHkg0EdiZc1cvNdV5n/Yq4oJGCbdfCJ7Vf1eFiLW90pDfqZLW4I GOovsYyKbmF1BWOa2mFk0qOoF1aC8Kf/MYQZzlpC6q2eTDk8dNQQvqAk18Fy5rmZ kXjppxEviKZOoz2KPjqgAsqE7evSBO43KylWofSS7LKHiQ4j7Q+IrTL/mVWaFHSu UUrqgzTBohKLL2K2vLFtLZnC9xiwxXe01xBe2LESNUmPfJ3cW49Wt0py4an8sIuL +r+VHsruW3jcNstiVucJMLJL+JktXNSxGpVQduWceZUnwRmksXYP6gjDvUn88MjV JjZJEBycooqtbUFwo9t977quF5lK9S93jcfU9kzrs2446/ZOmRl+Nwq1e1ZniVw3 Zusht1An1nJ6vJrZ+i9hYY85DE0/xhM1+xMk0FIJTWWbSLSSh2Qq6w9JI0ZIOwp9 +1mz54iRGDc/fFyBoYYUq6FrTQ71q+Ix+AvxZL1DlqFJL5WAYZO+BB5x+LJHsDsZ q1vAEh1igA0HE3kpqFqsTKvNMD6pzqA8H4aDS5zr004SD9p6KfrSq1uetW0xmlcu SCWtWbYgBEc= =t+zP -----END PGP SIGNATURE----- Tue Oct 12 08:42:20 UTC 2021 I: Checking whether the package is not for us Tue Oct 12 08:42:20 UTC 2021 I: Starting 1st build on remote node ionos1-amd64.debian.net. Tue Oct 12 08:42:20 UTC 2021 I: Preparing to do remote build '1' on ionos1-amd64.debian.net. Tue Oct 12 08:42:59 UTC 2021 I: Deleting $TMPDIR on ionos1-amd64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Mon Oct 11 20:42:21 -12 2021 I: pbuilder-time-stamp: 1634028141 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/buster-reproducible-base.tgz] I: copying local configuration I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [transrate-tools_1.0.0-2.dsc] I: copying [./transrate-tools_1.0.0.orig.tar.gz] I: copying [./transrate-tools_1.0.0-2.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/root/.gnupg/trustedkeys.kbx': General error gpgv: Signature made Tue Jul 3 17:54:34 2018 -12 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./transrate-tools_1.0.0-2.dsc dpkg-source: info: extracting transrate-tools in transrate-tools-1.0.0 dpkg-source: info: unpacking transrate-tools_1.0.0.orig.tar.gz dpkg-source: info: unpacking transrate-tools_1.0.0-2.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying cmake-bamtools I: using fakeroot in build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/3880968/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='amd64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=15' DISTRIBUTION='' HOME='/root' HOST_ARCH='amd64' IFS=' ' INVOCATION_ID='be08c008679049afb0292cf5bca3ab78' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='3880968' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.AN1ClnktpN/pbuilderrc_f7Zy --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/buster-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.AN1ClnktpN/b1 --logfile b1/build.log transrate-tools_1.0.0-2.dsc' SUDO_GID='110' SUDO_UID='105' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://78.137.99.97:3128' I: uname -a Linux ionos1-amd64 5.10.0-9-amd64 #1 SMP Debian 5.10.70-1 (2021-09-30) x86_64 GNU/Linux I: ls -l /bin total 5116 -rwxr-xr-x 1 root root 1168776 Apr 17 2019 bash -rwxr-xr-x 3 root root 38984 Jul 10 2019 bunzip2 -rwxr-xr-x 3 root root 38984 Jul 10 2019 bzcat lrwxrwxrwx 1 root root 6 Jul 10 2019 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2227 Jul 10 2019 bzdiff lrwxrwxrwx 1 root root 6 Jul 10 2019 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4877 Jun 24 2019 bzexe lrwxrwxrwx 1 root root 6 Jul 10 2019 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3641 Jul 10 2019 bzgrep -rwxr-xr-x 3 root root 38984 Jul 10 2019 bzip2 -rwxr-xr-x 1 root root 14328 Jul 10 2019 bzip2recover lrwxrwxrwx 1 root root 6 Jul 10 2019 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Jul 10 2019 bzmore -rwxr-xr-x 1 root root 43744 Feb 28 2019 cat -rwxr-xr-x 1 root root 64320 Feb 28 2019 chgrp -rwxr-xr-x 1 root root 64288 Feb 28 2019 chmod -rwxr-xr-x 1 root root 72512 Feb 28 2019 chown -rwxr-xr-x 1 root root 146880 Feb 28 2019 cp -rwxr-xr-x 1 root root 121464 Jan 17 2019 dash -rwxr-xr-x 1 root root 109408 Feb 28 2019 date -rwxr-xr-x 1 root root 76712 Feb 28 2019 dd -rwxr-xr-x 1 root root 93744 Feb 28 2019 df -rwxr-xr-x 1 root root 138856 Feb 28 2019 dir -rwxr-xr-x 1 root root 84288 Jan 9 2019 dmesg lrwxrwxrwx 1 root root 8 Sep 26 2018 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Sep 26 2018 domainname -> hostname -rwxr-xr-x 1 root root 39520 Feb 28 2019 echo -rwxr-xr-x 1 root root 28 Jan 7 2019 egrep -rwxr-xr-x 1 root root 35424 Feb 28 2019 false -rwxr-xr-x 1 root root 28 Jan 7 2019 fgrep -rwxr-xr-x 1 root root 68880 Jan 9 2019 findmnt -rwsr-xr-x 1 root root 34896 Apr 22 2020 fusermount -rwxr-xr-x 1 root root 198976 Jan 7 2019 grep -rwxr-xr-x 2 root root 2345 Jan 5 2019 gunzip -rwxr-xr-x 1 root root 6375 Jan 5 2019 gzexe -rwxr-xr-x 1 root root 98048 Jan 5 2019 gzip -rwxr-xr-x 1 root root 26696 Sep 26 2018 hostname -rwxr-xr-x 1 root root 68552 Feb 28 2019 ln -rwxr-xr-x 1 root root 56760 Jul 26 2018 login -rwxr-xr-x 1 root root 138856 Feb 28 2019 ls -rwxr-xr-x 1 root root 108624 Jan 9 2019 lsblk -rwxr-xr-x 1 root root 89088 Feb 28 2019 mkdir -rwxr-xr-x 1 root root 68544 Feb 28 2019 mknod -rwxr-xr-x 1 root root 43808 Feb 28 2019 mktemp -rwxr-xr-x 1 root root 43008 Jan 9 2019 more -rwsr-xr-x 1 root root 51280 Jan 9 2019 mount -rwxr-xr-x 1 root root 14408 Jan 9 2019 mountpoint -rwxr-xr-x 1 root root 138728 Feb 28 2019 mv lrwxrwxrwx 1 root root 8 Sep 26 2018 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Feb 14 2019 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 39616 Feb 28 2019 pwd lrwxrwxrwx 1 root root 4 Apr 17 2019 rbash -> bash -rwxr-xr-x 1 root root 47776 Feb 28 2019 readlink -rwxr-xr-x 1 root root 68416 Feb 28 2019 rm -rwxr-xr-x 1 root root 47776 Feb 28 2019 rmdir -rwxr-xr-x 1 root root 23312 Jan 21 2019 run-parts -rwxr-xr-x 1 root root 122224 Dec 22 2018 sed lrwxrwxrwx 1 root root 4 Oct 6 20:25 sh -> dash -rwxr-xr-x 1 root root 39552 Feb 28 2019 sleep -rwxr-xr-x 1 root root 80672 Feb 28 2019 stty -rwsr-xr-x 1 root root 63568 Jan 9 2019 su -rwxr-xr-x 1 root root 35488 Feb 28 2019 sync -rwxr-xr-x 1 root root 445560 Apr 23 2019 tar -rwxr-xr-x 1 root root 14440 Jan 21 2019 tempfile -rwxr-xr-x 1 root root 97152 Feb 28 2019 touch -rwxr-xr-x 1 root root 35424 Feb 28 2019 true -rwxr-xr-x 1 root root 14328 Apr 22 2020 ulockmgr_server -rwsr-xr-x 1 root root 34888 Jan 9 2019 umount -rwxr-xr-x 1 root root 39584 Feb 28 2019 uname -rwxr-xr-x 2 root root 2345 Jan 5 2019 uncompress -rwxr-xr-x 1 root root 138856 Feb 28 2019 vdir -rwxr-xr-x 1 root root 34896 Jan 9 2019 wdctl -rwxr-xr-x 1 root root 946 Jan 21 2019 which lrwxrwxrwx 1 root root 8 Sep 26 2018 ypdomainname -> hostname -rwxr-xr-x 1 root root 1983 Jan 5 2019 zcat -rwxr-xr-x 1 root root 1677 Jan 5 2019 zcmp -rwxr-xr-x 1 root root 5879 Jan 5 2019 zdiff -rwxr-xr-x 1 root root 29 Jan 5 2019 zegrep -rwxr-xr-x 1 root root 29 Jan 5 2019 zfgrep -rwxr-xr-x 1 root root 2080 Jan 5 2019 zforce -rwxr-xr-x 1 root root 7584 Jan 5 2019 zgrep -rwxr-xr-x 1 root root 2205 Jan 5 2019 zless -rwxr-xr-x 1 root root 1841 Jan 5 2019 zmore -rwxr-xr-x 1 root root 4552 Jan 5 2019 znew I: user script /srv/workspace/pbuilder/3880968/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper (>= 11~), cmake, libbamtools-dev (>= 2.4+dfsg-1~), zlib1g-dev, help2man dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19195 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper (>= 11~); however: Package debhelper is not installed. pbuilder-satisfydepends-dummy depends on cmake; however: Package cmake is not installed. pbuilder-satisfydepends-dummy depends on libbamtools-dev (>= 2.4+dfsg-1~); however: Package libbamtools-dev is not installed. pbuilder-satisfydepends-dummy depends on zlib1g-dev; however: Package zlib1g-dev is not installed. pbuilder-satisfydepends-dummy depends on help2man; however: Package help2man is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdmainutils{a} cmake{a} cmake-data{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} help2man{a} intltool-debian{a} libarchive-zip-perl{a} libarchive13{a} libbamtools-dev{a} libbamtools2.5.1{a} libbsd0{a} libcroco3{a} libcurl4{a} libelf1{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libglib2.0-0{a} libgssapi-krb5-2{a} libicu63{a} libjsoncpp1{a} libk5crypto3{a} libkeyutils1{a} libkrb5-3{a} libkrb5support0{a} libldap-2.4-2{a} libldap-common{a} liblocale-gettext-perl{a} libmagic-mgc{a} libmagic1{a} libncurses6{a} libnghttp2-14{a} libpipeline1{a} libprocps7{a} libpsl5{a} librhash0{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libsigsegv2{a} libssh2-1{a} libssl1.1{a} libtool{a} libuchardet0{a} libuv1{a} libxml2{a} lsb-base{a} m4{a} man-db{a} po-debconf{a} procps{a} sensible-utils{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl krb5-locales libarchive-cpio-perl libglib2.0-data libgpm2 libltdl-dev libmail-sendmail-perl libsasl2-modules lynx psmisc publicsuffix shared-mime-info wget xdg-user-dirs 0 packages upgraded, 63 newly installed, 0 to remove and 0 not upgraded. Need to get 29.1 MB of archives. After unpacking 108 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian buster/main amd64 libbsd0 amd64 0.9.1-2+deb10u1 [99.5 kB] Get: 2 http://deb.debian.org/debian buster/main amd64 bsdmainutils amd64 11.1.2+b1 [191 kB] Get: 3 http://deb.debian.org/debian buster/main amd64 libuchardet0 amd64 0.0.6-3 [64.9 kB] Get: 4 http://deb.debian.org/debian buster/main amd64 groff-base amd64 1.22.4-3+deb10u1 [916 kB] Get: 5 http://deb.debian.org/debian buster/main amd64 libpipeline1 amd64 1.5.1-2 [31.2 kB] Get: 6 http://deb.debian.org/debian buster/main amd64 man-db amd64 2.8.5-2 [1274 kB] Get: 7 http://deb.debian.org/debian buster/main amd64 liblocale-gettext-perl amd64 1.07-3+b4 [18.9 kB] Get: 8 http://deb.debian.org/debian buster/main amd64 libncurses6 amd64 6.1+20181013-2+deb10u2 [102 kB] Get: 9 http://deb.debian.org/debian buster/main amd64 libprocps7 amd64 2:3.3.15-2 [61.7 kB] Get: 10 http://deb.debian.org/debian buster/main amd64 lsb-base all 10.2019051400 [28.4 kB] Get: 11 http://deb.debian.org/debian buster/main amd64 procps amd64 2:3.3.15-2 [259 kB] Get: 12 http://deb.debian.org/debian buster/main amd64 sensible-utils all 0.0.12 [15.8 kB] Get: 13 http://deb.debian.org/debian buster/main amd64 libmagic-mgc amd64 1:5.35-4+deb10u2 [242 kB] Get: 14 http://deb.debian.org/debian buster/main amd64 libmagic1 amd64 1:5.35-4+deb10u2 [118 kB] Get: 15 http://deb.debian.org/debian buster/main amd64 file amd64 1:5.35-4+deb10u2 [66.4 kB] Get: 16 http://deb.debian.org/debian buster/main amd64 gettext-base amd64 0.19.8.1-9 [123 kB] Get: 17 http://deb.debian.org/debian buster/main amd64 libsigsegv2 amd64 2.12-2 [32.8 kB] Get: 18 http://deb.debian.org/debian buster/main amd64 m4 amd64 1.4.18-2 [203 kB] Get: 19 http://deb.debian.org/debian buster/main amd64 autoconf all 2.69-11 [341 kB] Get: 20 http://deb.debian.org/debian buster/main amd64 autotools-dev all 20180224.1 [77.0 kB] Get: 21 http://deb.debian.org/debian buster/main amd64 automake all 1:1.16.1-4 [771 kB] Get: 22 http://deb.debian.org/debian buster/main amd64 autopoint all 0.19.8.1-9 [434 kB] Get: 23 http://deb.debian.org/debian buster/main amd64 cmake-data all 3.13.4-1 [1476 kB] Get: 24 http://deb.debian.org/debian buster/main amd64 libicu63 amd64 63.1-6+deb10u1 [8300 kB] Get: 25 http://deb.debian.org/debian buster/main amd64 libxml2 amd64 2.9.4+dfsg1-7+deb10u2 [689 kB] Get: 26 http://deb.debian.org/debian buster/main amd64 libarchive13 amd64 3.3.3-4+deb10u1 [313 kB] Get: 27 http://deb.debian.org/debian buster/main amd64 libkeyutils1 amd64 1.6-6 [15.0 kB] Get: 28 http://deb.debian.org/debian buster/main amd64 libkrb5support0 amd64 1.17-3+deb10u3 [65.8 kB] Get: 29 http://deb.debian.org/debian buster/main amd64 libk5crypto3 amd64 1.17-3+deb10u3 [122 kB] Get: 30 http://deb.debian.org/debian buster/main amd64 libssl1.1 amd64 1.1.1d-0+deb10u7 [1539 kB] Get: 31 http://deb.debian.org/debian buster/main amd64 libkrb5-3 amd64 1.17-3+deb10u3 [370 kB] Get: 32 http://deb.debian.org/debian buster/main amd64 libgssapi-krb5-2 amd64 1.17-3+deb10u3 [158 kB] Get: 33 http://deb.debian.org/debian buster/main amd64 libsasl2-modules-db amd64 2.1.27+dfsg-1+deb10u1 [69.1 kB] Get: 34 http://deb.debian.org/debian buster/main amd64 libsasl2-2 amd64 2.1.27+dfsg-1+deb10u1 [106 kB] Get: 35 http://deb.debian.org/debian buster/main amd64 libldap-common all 2.4.47+dfsg-3+deb10u6 [90.0 kB] Get: 36 http://deb.debian.org/debian buster/main amd64 libldap-2.4-2 amd64 2.4.47+dfsg-3+deb10u6 [224 kB] Get: 37 http://deb.debian.org/debian buster/main amd64 libnghttp2-14 amd64 1.36.0-2+deb10u1 [85.0 kB] Get: 38 http://deb.debian.org/debian buster/main amd64 libpsl5 amd64 0.20.2-2 [53.7 kB] Get: 39 http://deb.debian.org/debian buster/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2 [60.5 kB] Get: 40 http://deb.debian.org/debian buster/main amd64 libssh2-1 amd64 1.8.0-2.1 [140 kB] Get: 41 http://deb.debian.org/debian buster/main amd64 libcurl4 amd64 7.64.0-4+deb10u2 [332 kB] Get: 42 http://deb.debian.org/debian buster/main amd64 libexpat1 amd64 2.2.6-2+deb10u1 [106 kB] Get: 43 http://deb.debian.org/debian buster/main amd64 libjsoncpp1 amd64 1.7.4-3 [75.6 kB] Get: 44 http://deb.debian.org/debian buster/main amd64 librhash0 amd64 1.3.8-1 [122 kB] Get: 45 http://deb.debian.org/debian buster/main amd64 libuv1 amd64 1.24.1-1+deb10u1 [110 kB] Get: 46 http://deb.debian.org/debian buster/main amd64 cmake amd64 3.13.4-1 [3480 kB] Get: 47 http://deb.debian.org/debian buster/main amd64 libtool all 2.4.6-9 [547 kB] Get: 48 http://deb.debian.org/debian buster/main amd64 dh-autoreconf all 19 [16.9 kB] Get: 49 http://deb.debian.org/debian buster/main amd64 libarchive-zip-perl all 1.64-1 [96.8 kB] Get: 50 http://deb.debian.org/debian buster/main amd64 libfile-stripnondeterminism-perl all 1.1.2-1 [19.8 kB] Get: 51 http://deb.debian.org/debian buster/main amd64 dh-strip-nondeterminism all 1.1.2-1 [13.0 kB] Get: 52 http://deb.debian.org/debian buster/main amd64 libelf1 amd64 0.176-1.1 [161 kB] Get: 53 http://deb.debian.org/debian buster/main amd64 dwz amd64 0.12-3 [78.0 kB] Get: 54 http://deb.debian.org/debian buster/main amd64 libglib2.0-0 amd64 2.58.3-2+deb10u3 [1259 kB] Get: 55 http://deb.debian.org/debian buster/main amd64 libcroco3 amd64 0.6.12-3 [145 kB] Get: 56 http://deb.debian.org/debian buster/main amd64 gettext amd64 0.19.8.1-9 [1303 kB] Get: 57 http://deb.debian.org/debian buster/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get: 58 http://deb.debian.org/debian buster/main amd64 po-debconf all 1.0.21 [248 kB] Get: 59 http://deb.debian.org/debian buster/main amd64 debhelper all 12.1.1 [1016 kB] Get: 60 http://deb.debian.org/debian buster/main amd64 help2man amd64 1.47.8 [177 kB] Get: 61 http://deb.debian.org/debian buster/main amd64 libbamtools2.5.1 amd64 2.5.1+dfsg-3 [154 kB] Get: 62 http://deb.debian.org/debian buster/main amd64 libbamtools-dev amd64 2.5.1+dfsg-3 [21.8 kB] Get: 63 http://deb.debian.org/debian buster/main amd64 zlib1g-dev amd64 1:1.2.11.dfsg-1 [214 kB] Fetched 29.1 MB in 0s (70.2 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libbsd0:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19195 files and directories currently installed.) Preparing to unpack .../00-libbsd0_0.9.1-2+deb10u1_amd64.deb ... Unpacking libbsd0:amd64 (0.9.1-2+deb10u1) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../01-bsdmainutils_11.1.2+b1_amd64.deb ... Unpacking bsdmainutils (11.1.2+b1) ... Selecting previously unselected package libuchardet0:amd64. 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Setting up procps (2:3.3.15-2) ... update-alternatives: using /usr/bin/w.procps to provide /usr/bin/w (w) in auto mode Setting up libssh2-1:amd64 (1.8.0-2.1) ... Setting up cmake-data (3.13.4-1) ... Setting up libkrb5-3:amd64 (1.17-3+deb10u3) ... Setting up libbsd0:amd64 (0.9.1-2+deb10u1) ... Setting up libelf1:amd64 (0.176-1.1) ... Setting up libxml2:amd64 (2.9.4+dfsg1-7+deb10u2) ... Setting up liblocale-gettext-perl (1.07-3+b4) ... Setting up libjsoncpp1:amd64 (1.7.4-3) ... Setting up libfile-stripnondeterminism-perl (1.1.2-1) ... Setting up libtool (2.4.6-9) ... Setting up libarchive13:amd64 (3.3.3-4+deb10u1) ... Setting up libldap-2.4-2:amd64 (2.4.47+dfsg-3+deb10u6) ... Setting up m4 (1.4.18-2) ... Setting up help2man (1.47.8) ... Setting up libbamtools-dev:amd64 (2.5.1+dfsg-3) ... Setting up bsdmainutils (11.1.2+b1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libgssapi-krb5-2:amd64 (1.17-3+deb10u3) ... Setting up libcroco3:amd64 (0.6.12-3) ... Setting up autoconf (2.69-11) ... Setting up dwz (0.12-3) ... Setting up groff-base (1.22.4-3+deb10u1) ... Setting up libcurl4:amd64 (7.64.0-4+deb10u2) ... Setting up automake (1:1.16.1-4) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up gettext (0.19.8.1-9) ... Setting up man-db (2.8.5-2) ... Not building database; man-db/auto-update is not 'true'. Setting up intltool-debian (0.35.0+20060710.5) ... Setting up cmake (3.13.4-1) ... Setting up po-debconf (1.0.21) ... Setting up debhelper (12.1.1) ... Setting up dh-autoreconf (19) ... Setting up dh-strip-nondeterminism (1.1.2-1) ... Processing triggers for libc-bin (2.28-10) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps Reading package lists... Building dependency tree... Reading state information... fakeroot is already the newest version (1.23-1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package I: Running cd /build/transrate-tools-1.0.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../transrate-tools_1.0.0-2_source.changes dpkg-buildpackage: info: source package transrate-tools dpkg-buildpackage: info: source version 1.0.0-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 fakeroot debian/rules clean dh clean dh_clean debian/rules build dh build dh_update_autotools_config dh_autoreconf dh_auto_configure cd obj-x86_64-linux-gnu && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/x86_64-linux-gnu .. -- The C compiler identification is GNU 8.3.0 -- The CXX compiler identification is GNU 8.3.0 -- Check for working C compiler: /usr/bin/cc -- Check for working C compiler: /usr/bin/cc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Detecting C compile features -- Detecting C compile features - done -- Check for working CXX compiler: /usr/bin/c++ -- Check for working CXX compiler: /usr/bin/c++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Detecting CXX compile features -- Detecting CXX compile features - done -- Found bamtools: /usr/lib/x86_64-linux-gnu/libbamtools.so -- Found ZLIB: /usr/lib/x86_64-linux-gnu/libz.so (found version "1.2.11") -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_INSTALL_LIBDIR CMAKE_INSTALL_LOCALSTATEDIR CMAKE_INSTALL_RUNSTATEDIR CMAKE_INSTALL_SYSCONFDIR -- Build files have been written to: /build/transrate-tools-1.0.0/obj-x86_64-linux-gnu dh_auto_build cd obj-x86_64-linux-gnu && make -j15 "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/transrate-tools-1.0.0/obj-x86_64-linux-gnu' /usr/bin/cmake -S/build/transrate-tools-1.0.0 -B/build/transrate-tools-1.0.0/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/transrate-tools-1.0.0/obj-x86_64-linux-gnu/CMakeFiles /build/transrate-tools-1.0.0/obj-x86_64-linux-gnu/CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/build/transrate-tools-1.0.0/obj-x86_64-linux-gnu' make -f src/CMakeFiles/bam-read.dir/build.make src/CMakeFiles/bam-read.dir/depend make[3]: Entering directory '/build/transrate-tools-1.0.0/obj-x86_64-linux-gnu' cd /build/transrate-tools-1.0.0/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/transrate-tools-1.0.0 /build/transrate-tools-1.0.0/src /build/transrate-tools-1.0.0/obj-x86_64-linux-gnu /build/transrate-tools-1.0.0/obj-x86_64-linux-gnu/src /build/transrate-tools-1.0.0/obj-x86_64-linux-gnu/src/CMakeFiles/bam-read.dir/DependInfo.cmake --color= Scanning dependencies of target bam-read make[3]: Leaving directory '/build/transrate-tools-1.0.0/obj-x86_64-linux-gnu' make -f src/CMakeFiles/bam-read.dir/build.make src/CMakeFiles/bam-read.dir/build make[3]: Entering directory '/build/transrate-tools-1.0.0/obj-x86_64-linux-gnu' [ 25%] Building CXX object src/CMakeFiles/bam-read.dir/segmenter.cpp.o [ 50%] Building CXX object src/CMakeFiles/bam-read.dir/pileup.cpp.o cd /build/transrate-tools-1.0.0/obj-x86_64-linux-gnu/src && /usr/bin/c++ -I/usr/include/bamtools -fPIC -O3 -DHAVE_ANSI_TERM -DHAVE_SSTREAM -DHAVE_CONFIG_H -Wall -std=c++11 -o CMakeFiles/bam-read.dir/segmenter.cpp.o -c /build/transrate-tools-1.0.0/src/segmenter.cpp cd /build/transrate-tools-1.0.0/obj-x86_64-linux-gnu/src && /usr/bin/c++ -I/usr/include/bamtools -fPIC -O3 -DHAVE_ANSI_TERM -DHAVE_SSTREAM -DHAVE_CONFIG_H -Wall -std=c++11 -o CMakeFiles/bam-read.dir/pileup.cpp.o -c /build/transrate-tools-1.0.0/src/pileup.cpp [ 75%] Building CXX object src/CMakeFiles/bam-read.dir/bam-read.cpp.o cd /build/transrate-tools-1.0.0/obj-x86_64-linux-gnu/src && /usr/bin/c++ -I/usr/include/bamtools -fPIC -O3 -DHAVE_ANSI_TERM -DHAVE_SSTREAM -DHAVE_CONFIG_H -Wall -std=c++11 -o CMakeFiles/bam-read.dir/bam-read.cpp.o -c /build/transrate-tools-1.0.0/src/bam-read.cpp /build/transrate-tools-1.0.0/src/segmenter.cpp: In member function 'void Segmenter::load_states()': /build/transrate-tools-1.0.0/src/segmenter.cpp:26:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector::size_type' {aka 'long unsigned int'} [-Wsign-compare] for (int i = 0 ; i < seq.size() ; ++i) { ~~^~~~~~~~~~~~ [100%] Linking CXX executable bam-read cd /build/transrate-tools-1.0.0/obj-x86_64-linux-gnu/src && /usr/bin/cmake -E cmake_link_script CMakeFiles/bam-read.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -O3 -DHAVE_ANSI_TERM -DHAVE_SSTREAM -DHAVE_CONFIG_H -Wall -std=c++11 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/bam-read.dir/bam-read.cpp.o CMakeFiles/bam-read.dir/pileup.cpp.o CMakeFiles/bam-read.dir/segmenter.cpp.o -o bam-read -lbamtools make[3]: Leaving directory '/build/transrate-tools-1.0.0/obj-x86_64-linux-gnu' [100%] Built target bam-read make[2]: Leaving directory '/build/transrate-tools-1.0.0/obj-x86_64-linux-gnu' /usr/bin/cmake -E cmake_progress_start /build/transrate-tools-1.0.0/obj-x86_64-linux-gnu/CMakeFiles 0 make[1]: Leaving directory '/build/transrate-tools-1.0.0/obj-x86_64-linux-gnu' dh_auto_test cd obj-x86_64-linux-gnu && make -j15 test ARGS\+=-j15 make[1]: Entering directory '/build/transrate-tools-1.0.0/obj-x86_64-linux-gnu' Running tests... /usr/bin/ctest --force-new-ctest-process -j15 Test project /build/transrate-tools-1.0.0/obj-x86_64-linux-gnu No tests were found!!! make[1]: Leaving directory '/build/transrate-tools-1.0.0/obj-x86_64-linux-gnu' create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary dh binary dh_testroot dh_prep debian/rules override_dh_auto_install make[1]: Entering directory '/build/transrate-tools-1.0.0' dh_auto_install help2man --no-info --include debian/bam-read-man-include \ obj*/src/bam-read > debian/bam-read.1 make[1]: Leaving directory '/build/transrate-tools-1.0.0' dh_install dh_installdocs dh_installchangelogs dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_strip dh_makeshlibs dh_shlibdeps dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'transrate-tools' in '../transrate-tools_1.0.0-2_amd64.deb'. dpkg-deb: building package 'transrate-tools-dbgsym' in '../transrate-tools-dbgsym_1.0.0-2_amd64.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../transrate-tools_1.0.0-2_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/3880968 and its subdirectories I: Current time: Mon Oct 11 20:42:59 -12 2021 I: pbuilder-time-stamp: 1634028179 Tue Oct 12 08:42:59 UTC 2021 I: 1st build successful. Starting 2nd build on remote node ionos15-amd64.debian.net. Tue Oct 12 08:42:59 UTC 2021 I: Preparing to do remote build '2' on ionos15-amd64.debian.net. Tue Oct 12 08:44:30 UTC 2021 I: Deleting $TMPDIR on ionos15-amd64.debian.net. Tue Oct 12 08:44:31 UTC 2021 I: transrate-tools_1.0.0-2_amd64.changes: Format: 1.8 Date: Tue, 03 Jul 2018 22:39:11 +0200 Source: transrate-tools Binary: transrate-tools transrate-tools-dbgsym Architecture: amd64 Version: 1.0.0-2 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: transrate-tools - helper for transrate Changes: transrate-tools (1.0.0-2) unstable; urgency=medium . * Team upload. * Fixed watch file * cme fix dpkg-control * debhelper 11 * Point Vcs fields to salsa.debian.org * Standards-Version: 4.1.4 * hardening=+all Checksums-Sha1: 1a73ed512f29af9ed51d054b90af8119f068b8f8 4132 transrate-tools-dbgsym_1.0.0-2_amd64.deb ab9647fd5f606acfd1523873511c14de0016aa36 5959 transrate-tools_1.0.0-2_amd64.buildinfo 77e2b15daedd73a94cc2b9bf2dba2d50401a19c8 15908 transrate-tools_1.0.0-2_amd64.deb Checksums-Sha256: 34fbc2067a5b885901491483ef71a35d89a986d9b6ab8a8ad46aa06577af84db 4132 transrate-tools-dbgsym_1.0.0-2_amd64.deb 509ccca8d9f43afdde1dd44f14e344499c340186f0ace8b79351ea36d827198f 5959 transrate-tools_1.0.0-2_amd64.buildinfo 04188801426257d5c8822d6dbfa9f3122a5ff3f96fade9bb442282237fb470a8 15908 transrate-tools_1.0.0-2_amd64.deb Files: 37d7026dd5a62e8794a0cfad5be13167 4132 debug optional transrate-tools-dbgsym_1.0.0-2_amd64.deb eecff0a173051fc0cf44461410ee63d2 5959 science optional transrate-tools_1.0.0-2_amd64.buildinfo d2dd4e617a4b07958f92bb2badbab93a 15908 science optional transrate-tools_1.0.0-2_amd64.deb Tue Oct 12 08:44:32 UTC 2021 I: will be used to compare the two builds: # Profiling output for: /usr/bin/diffoscope --html /srv/reproducible-results/rbuild-debian/tmp.AN1ClnktpN/transrate-tools_1.0.0-2.diffoscope.html --text /srv/reproducible-results/rbuild-debian/tmp.AN1ClnktpN/transrate-tools_1.0.0-2.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/tmp.AN1ClnktpN/transrate-tools_1.0.0-2.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/tmp.AN1ClnktpN/b1/transrate-tools_1.0.0-2_amd64.changes /srv/reproducible-results/rbuild-debian/tmp.AN1ClnktpN/b2/transrate-tools_1.0.0-2_amd64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.259s) 0.259s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.026s) 0.026s 10 calls diffoscope.comparators.binary.FilesystemFile 0.000s 8 calls abc.DotChangesFile ## specialize (total time: 0.000s) 0.000s 1 call specialize Tue Oct 12 08:44:33 UTC 2021 I: found no differences in the changes files, and a .buildinfo file also exists. Tue Oct 12 08:44:33 UTC 2021 I: transrate-tools from buster built successfully and reproducibly on amd64. Tue Oct 12 08:44:34 UTC 2021 I: Submitting .buildinfo files to external archives: Tue Oct 12 08:44:34 UTC 2021 I: Submitting 8.0K b1/transrate-tools_1.0.0-2_amd64.buildinfo.asc Tue Oct 12 08:44:35 UTC 2021 I: Submitting 8.0K b2/transrate-tools_1.0.0-2_amd64.buildinfo.asc Tue Oct 12 08:44:37 UTC 2021 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Tue Oct 12 08:44:37 UTC 2021 I: Done submitting .buildinfo files. Tue Oct 12 08:44:37 UTC 2021 I: Removing signed transrate-tools_1.0.0-2_amd64.buildinfo.asc files: removed './b1/transrate-tools_1.0.0-2_amd64.buildinfo.asc' removed './b2/transrate-tools_1.0.0-2_amd64.buildinfo.asc'