Sat Jul 3 10:04:45 UTC 2021 I: starting to build readseq/buster/amd64 on jenkins on '2021-07-03 10:04' Sat Jul 3 10:04:45 UTC 2021 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/amd64_13/55974/console.log Sat Jul 3 10:04:45 UTC 2021 I: Downloading source for buster/readseq=1-13 --2021-07-03 10:04:45-- http://deb.debian.org/debian/pool/main/r/readseq/readseq_1-13.dsc Connecting to 78.137.99.97:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 1946 (1.9K) Saving to: ‘readseq_1-13.dsc’ 0K . 100% 46.4M=0s 2021-07-03 10:04:45 (46.4 MB/s) - ‘readseq_1-13.dsc’ saved [1946/1946] Sat Jul 3 10:04:46 UTC 2021 I: readseq_1-13.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: readseq Binary: readseq Architecture: any Version: 1-13 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille Homepage: http://iubio.bio.indiana.edu/soft/molbio/readseq/ Standards-Version: 4.1.4 Vcs-Browser: https://salsa.debian.org/med-team/readseq Vcs-Git: https://salsa.debian.org/med-team/readseq.git Testsuite: autopkgtest Build-Depends: debhelper (>= 11~), ncbi-tools-dev Package-List: readseq deb science optional arch=any Checksums-Sha1: 474839186eec28f650ac89a33829673fa40c3bbb 54557 readseq_1.orig.tar.gz ad4e0f7164caae1ffc1f5c21e5bb4eeb59ee8f03 17340 readseq_1-13.debian.tar.xz Checksums-Sha256: b704d7a12c5d834390f3ed4233f1409c5f1ed53b0b9accf5ab632a513de1183c 54557 readseq_1.orig.tar.gz f0b496b6c92f60e88ad037dd238cdb4433099f2a9256fc566294e8afe6707c2d 17340 readseq_1-13.debian.tar.xz Files: 3973daff73375953369c31c5c1661699 54557 readseq_1.orig.tar.gz 388b8d7bb24ca1693d252fa333a9f50f 17340 readseq_1-13.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJCBAEBCAAsFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAlsupYgOHHRpbGxlYUBy a2kuZGUACgkQV4oElNHGRtFS5A/+NZGTMFkJoWeEhE1cAJxzvl8YjviICvRJb9ce YWZSgJapy2fmd88zewohk7w7VcfvzQ4cAAzR4JcfUVNFV35k5X30q4LFfbfHTTQW 9DAa8RhARMY4TCGsakPYhODPCVQeL8yz6k7ne3Y7nChmKivWRb4ktF1eUJKFX7yB rppqK4ZWFJEie4N+W9yCM2MRRDGTx5EP6XuVKIVU2Ovmjzvixtl4DVovbSbuwHaA hGPdwkkprEMtQjBD0J+jt3IvtsRJEY3P8or/mmSjh8onao85U5u7JDTDmcX09Doa pzjmU7Mui/6lgWiTDXueTigb6I9tDkMfVeT8GACzP/GsNXYq0XLexWgwIiuA/OPS 3tgLwzc5dJ3YZFxWU3Gkxd9hldV4YOMZsjx+u3Zk4OVqUT+UsRBnAnlgcMRnIXOm 2v1l3s9GQyUsvpds8/rwukL+TkV5fF5mK6PcRxPxlDv6+gCSycklf8TO5AdUvTd/ X32UMFoAtnnAmm/7FQi0C8yInRUdmBKdKGZSBLsEQc7mPVYwAcSN7/svtMBzYIAt iBGqF3gdwblGnAb+HYGuPAr4n8SF6vhzNKq1fhqXar5G31Zj1PS1mGP6Oqqbo41X fJNebBIlxv26ybKf4My/MXb6+U4FkN5e6wOH6MRkfWg11foQmsabeEMkE5ET+gN/ W6L9WrA= =pC2Q -----END PGP SIGNATURE----- Sat Jul 3 10:04:46 UTC 2021 I: Checking whether the package is not for us Sat Jul 3 10:04:46 UTC 2021 I: Starting 1st build on remote node ionos11-amd64.debian.net. Sat Jul 3 10:04:46 UTC 2021 I: Preparing to do remote build '1' on ionos11-amd64.debian.net. Sat Jul 3 10:05:16 UTC 2021 I: Deleting $TMPDIR on ionos11-amd64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Fri Jul 2 22:04:47 -12 2021 I: pbuilder-time-stamp: 1625306687 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/buster-reproducible-base.tgz] I: copying local configuration I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [readseq_1-13.dsc] I: copying [./readseq_1.orig.tar.gz] I: copying [./readseq_1-13.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/root/.gnupg/trustedkeys.kbx': General error gpgv: Signature made Sat Jun 23 07:54:48 2018 -12 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tillea@rki.de" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./readseq_1-13.dsc dpkg-source: info: extracting readseq in readseq-1 dpkg-source: info: unpacking readseq_1.orig.tar.gz dpkg-source: info: unpacking readseq_1-13.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying 20-Formats.patch dpkg-source: info: applying 20-Makefile.patch dpkg-source: info: applying 30-arb-code-patches.patch dpkg-source: info: applying 552830.patch dpkg-source: info: applying gcc-4.6_format-security.patch dpkg-source: info: applying enable_tests.patch dpkg-source: info: applying hardening.patch dpkg-source: info: applying buffer_overflow.patch dpkg-source: info: applying fix_tests.patch I: using fakeroot in build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/54495/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='amd64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=15' DISTRIBUTION='' HOME='/root' HOST_ARCH='amd64' IFS=' ' INVOCATION_ID='68017d7b93bf4fd88c8e409b49775be7' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='54495' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.UB32jFmVb5/pbuilderrc_nHx8 --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/buster-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.UB32jFmVb5/b1 --logfile b1/build.log readseq_1-13.dsc' SUDO_GID='111' SUDO_UID='106' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://78.137.99.97:3128' I: uname -a Linux ionos11-amd64 4.19.0-17-amd64 #1 SMP Debian 4.19.194-2 (2021-06-21) x86_64 GNU/Linux I: ls -l /bin total 5116 -rwxr-xr-x 1 root root 1168776 Apr 17 2019 bash -rwxr-xr-x 3 root root 38984 Jul 10 2019 bunzip2 -rwxr-xr-x 3 root root 38984 Jul 10 2019 bzcat lrwxrwxrwx 1 root root 6 Jul 10 2019 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2227 Jul 10 2019 bzdiff lrwxrwxrwx 1 root root 6 Jul 10 2019 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4877 Jun 24 2019 bzexe lrwxrwxrwx 1 root root 6 Jul 10 2019 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3641 Jul 10 2019 bzgrep -rwxr-xr-x 3 root root 38984 Jul 10 2019 bzip2 -rwxr-xr-x 1 root root 14328 Jul 10 2019 bzip2recover lrwxrwxrwx 1 root root 6 Jul 10 2019 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Jul 10 2019 bzmore -rwxr-xr-x 1 root root 43744 Feb 28 2019 cat -rwxr-xr-x 1 root root 64320 Feb 28 2019 chgrp -rwxr-xr-x 1 root root 64288 Feb 28 2019 chmod -rwxr-xr-x 1 root root 72512 Feb 28 2019 chown -rwxr-xr-x 1 root root 146880 Feb 28 2019 cp -rwxr-xr-x 1 root root 121464 Jan 17 2019 dash -rwxr-xr-x 1 root root 109408 Feb 28 2019 date -rwxr-xr-x 1 root root 76712 Feb 28 2019 dd -rwxr-xr-x 1 root root 93744 Feb 28 2019 df -rwxr-xr-x 1 root root 138856 Feb 28 2019 dir -rwxr-xr-x 1 root root 84288 Jan 9 2019 dmesg lrwxrwxrwx 1 root root 8 Sep 26 2018 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Sep 26 2018 domainname -> hostname -rwxr-xr-x 1 root root 39520 Feb 28 2019 echo -rwxr-xr-x 1 root root 28 Jan 7 2019 egrep -rwxr-xr-x 1 root root 35424 Feb 28 2019 false -rwxr-xr-x 1 root root 28 Jan 7 2019 fgrep -rwxr-xr-x 1 root root 68880 Jan 9 2019 findmnt -rwsr-xr-x 1 root root 34896 Apr 22 2020 fusermount -rwxr-xr-x 1 root root 198976 Jan 7 2019 grep -rwxr-xr-x 2 root root 2345 Jan 5 2019 gunzip -rwxr-xr-x 1 root root 6375 Jan 5 2019 gzexe -rwxr-xr-x 1 root root 98048 Jan 5 2019 gzip -rwxr-xr-x 1 root root 26696 Sep 26 2018 hostname -rwxr-xr-x 1 root root 68552 Feb 28 2019 ln -rwxr-xr-x 1 root root 56760 Jul 26 2018 login -rwxr-xr-x 1 root root 138856 Feb 28 2019 ls -rwxr-xr-x 1 root root 108624 Jan 9 2019 lsblk -rwxr-xr-x 1 root root 89088 Feb 28 2019 mkdir -rwxr-xr-x 1 root root 68544 Feb 28 2019 mknod -rwxr-xr-x 1 root root 43808 Feb 28 2019 mktemp -rwxr-xr-x 1 root root 43008 Jan 9 2019 more -rwsr-xr-x 1 root root 51280 Jan 9 2019 mount -rwxr-xr-x 1 root root 14408 Jan 9 2019 mountpoint -rwxr-xr-x 1 root root 138728 Feb 28 2019 mv lrwxrwxrwx 1 root root 8 Sep 26 2018 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Feb 14 2019 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 39616 Feb 28 2019 pwd lrwxrwxrwx 1 root root 4 Apr 17 2019 rbash -> bash -rwxr-xr-x 1 root root 47776 Feb 28 2019 readlink -rwxr-xr-x 1 root root 68416 Feb 28 2019 rm -rwxr-xr-x 1 root root 47776 Feb 28 2019 rmdir -rwxr-xr-x 1 root root 23312 Jan 21 2019 run-parts -rwxr-xr-x 1 root root 122224 Dec 22 2018 sed lrwxrwxrwx 1 root root 4 Jun 20 20:26 sh -> dash -rwxr-xr-x 1 root root 39552 Feb 28 2019 sleep -rwxr-xr-x 1 root root 80672 Feb 28 2019 stty -rwsr-xr-x 1 root root 63568 Jan 9 2019 su -rwxr-xr-x 1 root root 35488 Feb 28 2019 sync -rwxr-xr-x 1 root root 445560 Apr 23 2019 tar -rwxr-xr-x 1 root root 14440 Jan 21 2019 tempfile -rwxr-xr-x 1 root root 97152 Feb 28 2019 touch -rwxr-xr-x 1 root root 35424 Feb 28 2019 true -rwxr-xr-x 1 root root 14328 Apr 22 2020 ulockmgr_server -rwsr-xr-x 1 root root 34888 Jan 9 2019 umount -rwxr-xr-x 1 root root 39584 Feb 28 2019 uname -rwxr-xr-x 2 root root 2345 Jan 5 2019 uncompress -rwxr-xr-x 1 root root 138856 Feb 28 2019 vdir -rwxr-xr-x 1 root root 34896 Jan 9 2019 wdctl -rwxr-xr-x 1 root root 946 Jan 21 2019 which lrwxrwxrwx 1 root root 8 Sep 26 2018 ypdomainname -> hostname -rwxr-xr-x 1 root root 1983 Jan 5 2019 zcat -rwxr-xr-x 1 root root 1677 Jan 5 2019 zcmp -rwxr-xr-x 1 root root 5879 Jan 5 2019 zdiff -rwxr-xr-x 1 root root 29 Jan 5 2019 zegrep -rwxr-xr-x 1 root root 29 Jan 5 2019 zfgrep -rwxr-xr-x 1 root root 2080 Jan 5 2019 zforce -rwxr-xr-x 1 root root 7584 Jan 5 2019 zgrep -rwxr-xr-x 1 root root 2205 Jan 5 2019 zless -rwxr-xr-x 1 root root 1841 Jan 5 2019 zmore -rwxr-xr-x 1 root root 4552 Jan 5 2019 znew I: user script /srv/workspace/pbuilder/54495/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper (>= 11~), ncbi-tools-dev dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19195 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper (>= 11~); however: Package debhelper is not installed. pbuilder-satisfydepends-dummy depends on ncbi-tools-dev; however: Package ncbi-tools-dev is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdmainutils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libbsd0{a} libcroco3{a} libelf1{a} libfile-stripnondeterminism-perl{a} libglib2.0-0{a} libicu63{a} libmagic-mgc{a} libmagic1{a} libncbi6{a} libncbi6-dev{a} libncurses6{a} libpipeline1{a} libsigsegv2{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} ncbi-data{a} po-debconf{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libglib2.0-data libgpm2 libltdl-dev libmail-sendmail-perl lynx ncbi-tools-bin shared-mime-info wget xdg-user-dirs 0 packages upgraded, 36 newly installed, 0 to remove and 0 not upgraded. Need to get 32.0 MB of archives. After unpacking 135 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian buster/main amd64 libbsd0 amd64 0.9.1-2+deb10u1 [99.5 kB] Get: 2 http://deb.debian.org/debian buster/main amd64 bsdmainutils amd64 11.1.2+b1 [191 kB] Get: 3 http://deb.debian.org/debian buster/main amd64 libuchardet0 amd64 0.0.6-3 [64.9 kB] Get: 4 http://deb.debian.org/debian buster/main amd64 groff-base amd64 1.22.4-3+deb10u1 [916 kB] Get: 5 http://deb.debian.org/debian buster/main amd64 libpipeline1 amd64 1.5.1-2 [31.2 kB] Get: 6 http://deb.debian.org/debian buster/main amd64 man-db amd64 2.8.5-2 [1274 kB] Get: 7 http://deb.debian.org/debian buster/main amd64 sensible-utils all 0.0.12 [15.8 kB] Get: 8 http://deb.debian.org/debian buster/main amd64 libmagic-mgc amd64 1:5.35-4+deb10u2 [242 kB] Get: 9 http://deb.debian.org/debian buster/main amd64 libmagic1 amd64 1:5.35-4+deb10u2 [118 kB] Get: 10 http://deb.debian.org/debian buster/main amd64 file amd64 1:5.35-4+deb10u2 [66.4 kB] Get: 11 http://deb.debian.org/debian buster/main amd64 gettext-base amd64 0.19.8.1-9 [123 kB] Get: 12 http://deb.debian.org/debian buster/main amd64 libsigsegv2 amd64 2.12-2 [32.8 kB] Get: 13 http://deb.debian.org/debian buster/main amd64 m4 amd64 1.4.18-2 [203 kB] Get: 14 http://deb.debian.org/debian buster/main amd64 autoconf all 2.69-11 [341 kB] Get: 15 http://deb.debian.org/debian buster/main amd64 autotools-dev all 20180224.1 [77.0 kB] Get: 16 http://deb.debian.org/debian buster/main amd64 automake all 1:1.16.1-4 [771 kB] Get: 17 http://deb.debian.org/debian buster/main amd64 autopoint all 0.19.8.1-9 [434 kB] Get: 18 http://deb.debian.org/debian buster/main amd64 libtool all 2.4.6-9 [547 kB] Get: 19 http://deb.debian.org/debian buster/main amd64 dh-autoreconf all 19 [16.9 kB] Get: 20 http://deb.debian.org/debian buster/main amd64 libarchive-zip-perl all 1.64-1 [96.8 kB] Get: 21 http://deb.debian.org/debian buster/main amd64 libfile-stripnondeterminism-perl all 1.1.2-1 [19.8 kB] Get: 22 http://deb.debian.org/debian buster/main amd64 dh-strip-nondeterminism all 1.1.2-1 [13.0 kB] Get: 23 http://deb.debian.org/debian buster/main amd64 libelf1 amd64 0.176-1.1 [161 kB] Get: 24 http://deb.debian.org/debian buster/main amd64 dwz amd64 0.12-3 [78.0 kB] Get: 25 http://deb.debian.org/debian buster/main amd64 libglib2.0-0 amd64 2.58.3-2+deb10u3 [1259 kB] Get: 26 http://deb.debian.org/debian buster/main amd64 libicu63 amd64 63.1-6+deb10u1 [8300 kB] Get: 27 http://deb.debian.org/debian buster/main amd64 libxml2 amd64 2.9.4+dfsg1-7+deb10u2 [689 kB] Get: 28 http://deb.debian.org/debian buster/main amd64 libcroco3 amd64 0.6.12-3 [145 kB] Get: 29 http://deb.debian.org/debian buster/main amd64 libncurses6 amd64 6.1+20181013-2+deb10u2 [102 kB] Get: 30 http://deb.debian.org/debian buster/main amd64 gettext amd64 0.19.8.1-9 [1303 kB] Get: 31 http://deb.debian.org/debian buster/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get: 32 http://deb.debian.org/debian buster/main amd64 po-debconf all 1.0.21 [248 kB] Get: 33 http://deb.debian.org/debian buster/main amd64 debhelper all 12.1.1 [1016 kB] Get: 34 http://deb.debian.org/debian buster/main amd64 ncbi-data all 6.1.20170106+dfsg1-0+deb10u2 [3552 kB] Get: 35 http://deb.debian.org/debian buster/main amd64 libncbi6 amd64 6.1.20170106+dfsg1-0+deb10u2 [4053 kB] Get: 36 http://deb.debian.org/debian buster/main amd64 libncbi6-dev amd64 6.1.20170106+dfsg1-0+deb10u2 [5336 kB] Fetched 32.0 MB in 1s (62.2 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libbsd0:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19195 files and directories currently installed.) Preparing to unpack .../00-libbsd0_0.9.1-2+deb10u1_amd64.deb ... Unpacking libbsd0:amd64 (0.9.1-2+deb10u1) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../01-bsdmainutils_11.1.2+b1_amd64.deb ... Unpacking bsdmainutils (11.1.2+b1) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../02-libuchardet0_0.0.6-3_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.6-3) ... Selecting previously unselected package groff-base. Preparing to unpack .../03-groff-base_1.22.4-3+deb10u1_amd64.deb ... Unpacking groff-base (1.22.4-3+deb10u1) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../04-libpipeline1_1.5.1-2_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.1-2) ... Selecting previously unselected package man-db. Preparing to unpack .../05-man-db_2.8.5-2_amd64.deb ... Unpacking man-db (2.8.5-2) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../06-sensible-utils_0.0.12_all.deb ... Unpacking sensible-utils (0.0.12) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../07-libmagic-mgc_1%3a5.35-4+deb10u2_amd64.deb ... Unpacking libmagic-mgc (1:5.35-4+deb10u2) ... Selecting previously unselected package libmagic1:amd64. Preparing to unpack .../08-libmagic1_1%3a5.35-4+deb10u2_amd64.deb ... Unpacking libmagic1:amd64 (1:5.35-4+deb10u2) ... Selecting previously unselected package file. Preparing to unpack .../09-file_1%3a5.35-4+deb10u2_amd64.deb ... Unpacking file (1:5.35-4+deb10u2) ... Selecting previously unselected package gettext-base. Preparing to unpack .../10-gettext-base_0.19.8.1-9_amd64.deb ... Unpacking gettext-base (0.19.8.1-9) ... Selecting previously unselected package libsigsegv2:amd64. Preparing to unpack .../11-libsigsegv2_2.12-2_amd64.deb ... Unpacking libsigsegv2:amd64 (2.12-2) ... Selecting previously unselected package m4. Preparing to unpack .../12-m4_1.4.18-2_amd64.deb ... Unpacking m4 (1.4.18-2) ... Selecting previously unselected package autoconf. Preparing to unpack .../13-autoconf_2.69-11_all.deb ... Unpacking autoconf (2.69-11) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../14-autotools-dev_20180224.1_all.deb ... 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Reading state information... fakeroot is already the newest version (1.23-1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package I: Running cd /build/readseq-1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b dpkg-buildpackage: info: source package readseq dpkg-buildpackage: info: source version 1-13 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Liubov Chuprikova dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 fakeroot debian/rules clean dh clean dh_auto_clean make -j15 clean make[1]: Entering directory '/build/readseq-1' rm -f *.o core test.* readseq make[1]: Leaving directory '/build/readseq-1' debian/rules override_dh_clean make[1]: Entering directory '/build/readseq-1' dh_clean rm -f readseq make[1]: Leaving directory '/build/readseq-1' debian/rules build dh build dh_update_autotools_config dh_autoreconf dh_auto_configure dh_auto_build make -j15 "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/readseq-1' Compiling readseq with NCBI toolkit support and ARB patches gcc -o readseq -I/usr/include/ncbi -g -O2 -ffile-prefix-map=/build/readseq-1=. -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -DNCBI -I/usr/include/ncbi -DARB readseq.c ureadseq.c ureadasn.c -lncbi -lncbiobj -lncbicdr -lncbiacc -lncbitool -lncbimmdb -lncbiid1 -lnetcli -lm -Wl,-z,relro -Wl,-z,now readseq.c: In function 'formatstr': readseq.c:267:41: warning: return discards 'const' qualifier from pointer target type [-Wdiscarded-qualifiers] case kASNseqset : return formats[kASN1-1]; ~~~~~~~^~~~~~~~~ readseq.c:269:45: warning: return discards 'const' qualifier from pointer target type [-Wdiscarded-qualifiers] case kPhylipSequential: return formats[kPhylip-1]; ~~~~~~~^~~~~~~~~~~ readseq.c:273:22: warning: return discards 'const' qualifier from pointer target type [-Wdiscarded-qualifiers] else return formats[format-1]; ~~~~~~~^~~~~~~~~~ readseq.c: In function 'Nlm_Main': readseq.c:801:5: warning: implicit declaration of function 'gets'; did you mean 'fgets'? [-Wimplicit-function-declaration] gets(oname= onamestore); ^~~~ fgets readseq.c:936:33: warning: format '%d' expects argument of type 'int', but argument 4 has type 'long int' [-Wformat=] sprintf( stemp,"%s_%d", oname, whichSeq); ~^ ~~~~~~~~ %ld readseq.c:938:48: warning: format '%d' expects argument of type 'int', but argument 3 has type 'long int' [-Wformat=] fprintf( stderr,"Writing sequence %d to file %s\n", whichSeq, stemp); ~^ ~~~~~~~~ %ld readseq.c:980:39: warning: format '%d' expects argument of type 'int', but argument 3 has type 'long int' [-Wformat=] fprintf( stderr, "Sequence %d, length= %d, checksum= %X, format= %s, id= %s\n", ~^ %ld whichSeq, seqlen, checksum, formatstr(format), seqidptr); ~~~~~~~~ readseq.c:980:51: warning: format '%d' expects argument of type 'int', but argument 4 has type 'long int' [-Wformat=] fprintf( stderr, "Sequence %d, length= %d, checksum= %X, format= %s, id= %s\n", ~^ %ld whichSeq, seqlen, checksum, formatstr(format), seqidptr); ~~~~~~ readseq.c:980:65: warning: format '%X' expects argument of type 'unsigned int', but argument 5 has type 'long unsigned int' [-Wformat=] fprintf( stderr, "Sequence %d, length= %d, checksum= %X, format= %s, id= %s\n", ~^ %lX whichSeq, seqlen, checksum, formatstr(format), seqidptr); ~~~~~~~~ readseq.c:998:53: warning: format '%d' expects argument of type 'int', but argument 3 has type 'long int' [-Wformat=] if (phylvers >= 4) fprintf(foo," %d %d\n", i, seqlen); ~^ ~ %ld readseq.c:998:56: warning: format '%d' expects argument of type 'int', but argument 4 has type 'long int' [-Wformat=] if (phylvers >= 4) fprintf(foo," %d %d\n", i, seqlen); ~^ ~~~~~~ %ld readseq.c:999:39: warning: format '%d' expects argument of type 'int', but argument 3 has type 'long int' [-Wformat=] else fprintf(foo," %d %d YF\n", i, seqlen); ~^ ~ %ld readseq.c:999:42: warning: format '%d' expects argument of type 'int', but argument 4 has type 'long int' [-Wformat=] else fprintf(foo," %d %d YF\n", i, seqlen); ~^ ~~~~~~ %ld readseq.c:1117:31: warning: format '%d' expects argument of type 'int', but argument 4 has type 'long int' [-Wformat=] fprintf(foo,"\n %s MSF: %d Type: N %s Check: %d ..\n\n", /* GSt + RL */ ~^ %ld cp, seqlen, timestr, checkall); ~~~~~~ readseq.c:1117:55: warning: format '%d' expects argument of type 'int', but argument 6 has type 'long unsigned int' [-Wformat=] fprintf(foo,"\n %s MSF: %d Type: N %s Check: %d ..\n\n", /* GSt + RL */ ~^ %ld cp, seqlen, timestr, checkall); ~~~~~~~~ readseq.c:1133:42: warning: format '%d' expects argument of type 'int', but argument 4 has type 'long int' [-Wformat=] if (phylvers >= 4) fprintf(foo," %d %d\n", seqout, seqlen); ~^ ~~~~~~ %ld readseq.c:1134:28: warning: format '%d' expects argument of type 'int', but argument 4 has type 'long int' [-Wformat=] else fprintf(foo," %d %d YF\n", seqout, seqlen); ~^ ~~~~~~ %ld readseq.c:1158:49: warning: format '%d' expects argument of type 'int', but argument 4 has type 'long int' [-Wformat=] fprintf(foo," dimensions ntax=%d nchar=%d;\n", seqout, seqlen); ~^ ~~~~~~ %ld ureadseq.c: In function 'seqFileFormatFp': ureadseq.c:1535:19: warning: format '%d' expects argument of type 'int *', but argument 3 has type 'long int *' [-Wformat=] sscanf( sp, "%d%d", &nspp, &nlen); ~^ ~~~~~ %ld ureadseq.c:1535:21: warning: format '%d' expects argument of type 'int *', but argument 4 has type 'long int *' [-Wformat=] sscanf( sp, "%d%d", &nspp, &nlen); ~^ ~~~~~ %ld ureadseq.c: In function 'writeSeq': ureadseq.c:1784:22: warning: format '%d' expects argument of type 'int', but argument 3 has type 'long int' [-Wformat=] sprintf(numform, "%d", seqlen); ~^ ~~~~~~ %ld ureadseq.c:1813:43: warning: format '%d' expects argument of type 'int', but argument 4 has type 'long int' [-Wformat=] fprintf(outf,"LOCUS %s %d bp\n", idword, seqlen); ~^ ~~~~~~ %ld ureadseq.c:1814:38: warning: format '%d' expects argument of type 'int', but argument 4 has type 'long int' [-Wformat=] fprintf(outf,"DEFINITION %s, %d bases, %X checksum.\n", seqname, seqlen, checksum); ~^ ~~~~~~ %ld ureadseq.c:1814:48: warning: format '%X' expects argument of type 'unsigned int', but argument 5 has type 'long unsigned int' [-Wformat=] fprintf(outf,"DEFINITION %s, %d bases, %X checksum.\n", seqname, seqlen, checksum); ~^ ~~~~~~~~ %lX ureadseq.c:1828:42: warning: format '%d' expects argument of type 'int', but argument 4 has type 'long int' [-Wformat=] fprintf(outf,"TITLE %s, %d bases, %X checksum.\n", seqname, seqlen, checksum); ~^ ~~~~~~ %ld ureadseq.c:1828:52: warning: format '%X' expects argument of type 'unsigned int', but argument 5 has type 'long unsigned int' [-Wformat=] fprintf(outf,"TITLE %s, %d bases, %X checksum.\n", seqname, seqlen, checksum); ~^ ~~~~~~~~ %lX ureadseq.c:1838:53: warning: format '%d' expects argument of type 'int', but argument 3 has type 'long int' [-Wformat=] for (j= 5; j<=width; j += 5) fprintf(outf,"%10d",j); ~~~^ ~ %10ld ureadseq.c:1848:26: warning: format '%d' expects argument of type 'int', but argument 4 has type 'long int' [-Wformat=] fprintf(outf,"%s, %d bases, %X checksum.\n", seqname, seqlen, checksum); ~^ ~~~~~~ %ld ureadseq.c:1848:36: warning: format '%X' expects argument of type 'unsigned int', but argument 5 has type 'long unsigned int' [-Wformat=] fprintf(outf,"%s, %d bases, %X checksum.\n", seqname, seqlen, checksum); ~^ ~~~~~~~~ %lX ureadseq.c:1857:31: warning: format '%d' expects argument of type 'int', but argument 4 has type 'long int' [-Wformat=] fprintf(outf,"DE %s, %d bases, %X checksum.\n", seqname, seqlen, checksum); ~^ ~~~~~~ %ld ureadseq.c:1857:41: warning: format '%X' expects argument of type 'unsigned int', but argument 5 has type 'long unsigned int' [-Wformat=] fprintf(outf,"DE %s, %d bases, %X checksum.\n", seqname, seqlen, checksum); ~^ ~~~~~~~~ %lX ureadseq.c:1858:37: warning: format '%d' expects argument of type 'int', but argument 3 has type 'long int' [-Wformat=] fprintf(outf,"SQ %d BP\n", seqlen); ~^ ~~~~~~ %ld ureadseq.c:1869:38: warning: format '%d' expects argument of type 'int', but argument 4 has type 'long int' [-Wformat=] fprintf(outf," %s Length: %d (today) Check: %d ..\n", idword, seqlen, checksum); ~^ ~~~~~~ %ld ureadseq.c:1869:58: warning: format '%d' expects argument of type 'int', but argument 5 has type 'long unsigned int' [-Wformat=] fprintf(outf," %s Length: %d (today) Check: %d ..\n", idword, seqlen, checksum); ~^ ~~~~~~~~ %ld ureadseq.c:1878:42: warning: format '%d' expects argument of type 'int', but argument 4 has type 'long int' [-Wformat=] fprintf(outf,"; DNA sequence %s, %d bases, %X checksum.\n;\n", seqname, seqlen, checksum); ~^ ~~~~~~ %ld ureadseq.c:1878:52: warning: format '%X' expects argument of type 'unsigned int', but argument 5 has type 'long unsigned int' [-Wformat=] fprintf(outf,"; DNA sequence %s, %d bases, %X checksum.\n;\n", seqname, seqlen, checksum); ~^ ~~~~~~~~ %lX ureadseq.c:1884:26: warning: format '%d' expects argument of type 'int', but argument 4 has type 'long int' [-Wformat=] fprintf(outf,"%s, %d bases, %X checksum.\n", seqname, seqlen, checksum); ~^ ~~~~~~ %ld ureadseq.c:1884:36: warning: format '%X' expects argument of type 'unsigned int', but argument 5 has type 'long unsigned int' [-Wformat=] fprintf(outf,"%s, %d bases, %X checksum.\n", seqname, seqlen, checksum); ~^ ~~~~~~~~ %lX ureadseq.c:1915:53: warning: format '%d' expects argument of type 'int', but argument 4 has type 'long int' [-Wformat=] fprintf(outf," repr raw, mol %s, length %d, topology linear,\n", cp, seqlen); ~^ ~~~~~~ %ld ureadseq.c:1937:41: warning: format '%d' expects argument of type 'int', but argument 4 has type 'long int' [-Wformat=] fprintf(outf,"[Name: %-16s Len:%6d Check: %8X]\n", idword, seqlen, checksum); ~~^ ~~~~~~ %6ld ureadseq.c:1937:53: warning: format '%X' expects argument of type 'unsigned int', but argument 5 has type 'long unsigned int' [-Wformat=] fprintf(outf,"[Name: %-16s Len:%6d Check: %8X]\n", idword, seqlen, checksum); ~~^ ~~~~~~~~ %8lX ureadseq.c:1954:42: warning: format '%d' expects argument of type 'int', but argument 4 has type 'long int' [-Wformat=] fprintf(outf,"Name: %-16s Len:%6d Check: %8X\n", idword, seqlen, checksum); ~~^ ~~~~~~ %6ld ureadseq.c:1954:54: warning: format '%X' expects argument of type 'unsigned int', but argument 5 has type 'long unsigned int' [-Wformat=] fprintf(outf,"Name: %-16s Len:%6d Check: %8X\n", idword, seqlen, checksum); ~~^ ~~~~~~~~ %8lX ureadseq.c:1960:40: warning: format '%d' expects argument of type 'int', but argument 4 has type 'long int' [-Wformat=] fprintf(outf," Name: %-16s Len:%6d Check: %5d Weight: 1.00\n", ~~^ %6ld idword, seqlen, checksum); ~~~~~~ ureadseq.c:1960:52: warning: format '%d' expects argument of type 'int', but argument 5 has type 'long unsigned int' [-Wformat=] fprintf(outf," Name: %-16s Len:%6d Check: %5d Weight: 1.00\n", ~~^ %5ld idword, seqlen, checksum); ~~~~~~~~ ureadseq.c:1972:27: warning: format '%d' expects argument of type 'int', but argument 4 has type 'long int' [-Wformat=] fprintf(outf,";%s, %d bases, %X checksum.\n", seqname, seqlen, checksum); ~^ ~~~~~~ %ld ureadseq.c:1972:37: warning: format '%X' expects argument of type 'unsigned int', but argument 5 has type 'long unsigned int' [-Wformat=] fprintf(outf,";%s, %d bases, %X checksum.\n", seqname, seqlen, checksum); ~^ ~~~~~~~~ %lX ureadseq.c:1979:18: warning: format '%d' expects argument of type 'int', but argument 3 has type 'long int' [-Wformat=] fprintf(outf,"%4d %-60s\n",seqlen,seqname); ~~^ ~~~~~~ %4ld ureadseq.c:2002:27: warning: format '%d' expects argument of type 'int', but argument 4 has type 'long int' [-Wformat=] fprintf(outf,">%s, %d bases, %X checksum.\n", seqname, seqlen, checksum); ~^ ~~~~~~ %ld ureadseq.c:2002:37: warning: format '%X' expects argument of type 'unsigned int', but argument 5 has type 'long unsigned int' [-Wformat=] fprintf(outf,">%s, %d bases, %X checksum.\n", seqname, seqlen, checksum); ~^ ~~~~~~~~ %lX ureadseq.c:2043:42: warning: format '%d' expects argument of type 'int', but argument 3 has type 'long int' [-Wformat=] if (numline==1) fprintf(outf,"%-9d ",i+1); ~~~^ ~~~ %-9ld ureadseq.c:2007:45: warning: '%d' directive writing between 1 and 6 bytes into a region of size between 2 and 7 [-Wformat-overflow=] if (*nameform==0) sprintf(nameform, "%%%d.%ds ",namewidth,namewidth); ^~ ureadseq.c:2007:39: note: directive argument in the range [-32768, 32767] if (*nameform==0) sprintf(nameform, "%%%d.%ds ",namewidth,namewidth); ^~~~~~~~~~~ ureadseq.c:2007:21: note: 'sprintf' output between 7 and 17 bytes into a destination of size 10 if (*nameform==0) sprintf(nameform, "%%%d.%ds ",namewidth,namewidth); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ureadseq.c:1780:3: warning: 'strncpy' specified bound depends on the length of the source argument [-Wstringop-overflow=] strncpy( seqnamestore, seqid, l); ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from ureadseq.c:27: ureadseq.c:1779:16: note: length computed here l = min(128, strlen(seqid)); ^~~~~~~~~~~~~ ureadseq.h:15:26: note: in definition of macro 'min' #define min(a,b) (a ;nucleic/amino, , 228 bases, 1B5655D0 checksum. > nucleic/amino, make[1]: [Makefile:70: test] Error 1 (ignored) Test for multiple-sequence format conversions: ./readseq -p -f=ig multi.std -otest.m-ig ./readseq -p -f=gb test.m-ig -otest.m-gb ./readseq -p -f=nbrf test.m-gb -otest.m-nbrf ./readseq -p -f=embl test.m-nbrf -otest.m-embl ./readseq -p -f=fasta test.m-embl -otest.m-fasta ./readseq -p -f=pir test.m-fasta -otest.m-pir ./readseq -p -f=msf test.m-pir -otest.m-msf ./readseq -p -f=paup test.m-msf -otest.m-paup ./readseq -p -f=ig test.m-paup -otest.m-ig-b diff test.m-ig test.m-ig-b 1,2c1,2 < ;acarr58sst , 183 bases, 64754A4D checksum. < acarr58sst --- > ;acarr58ss, 183 bases, 64754A4D checksum. > acarr58ss 7c7 < ;amgrrbst , 183 bases, C886D2FB checksum. --- > ;amgrrbst, 183 bases, C886D2FB checksum. 13c13 < ;bmorrbst , 183 bases, 3E9C23D6 checksum. --- > ;bmorrbst, 183 bases, 3E9C23D6 checksum. 19c19 < ;crerrbst , 183 bases, AC88A337 checksum. --- > ;crerrbst, 183 bases, AC88A337 checksum. 25,26c25,26 < ;ddirr58sst , 183 bases, 1E3D23B8 checksum. < ddirr58sst --- > ;ddirr58ss, 183 bases, 1E3D23B8 checksum. > ddirr58ss make[1]: [Makefile:82: test] Error 1 (ignored) Expect differences in the header lines due to different format headers. If any sequence lines differ, or if the checksums differ, there is a problem. ---------------------- To clean up test files, command me: make clean make[1]: Leaving directory '/build/readseq-1' create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary dh binary dh_testroot dh_prep dh_installdirs dh_auto_install make -j15 install DESTDIR=/build/readseq-1/debian/readseq AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/readseq-1' install readseq /build/readseq-1/debian/readseq/usr/bin install *.std /build/readseq-1/debian/readseq/usr/share/doc/readseq/tests install Makefile /build/readseq-1/debian/readseq/usr/share/doc/readseq/tests make[1]: Leaving directory '/build/readseq-1' dh_install dh_installdocs dh_installchangelogs dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_strip dh_makeshlibs dh_shlibdeps dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/readseq/usr/bin/readseq was not linked against libncbiNacc.so.6 (it uses none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/readseq/usr/bin/readseq was not linked against libnetcli.so.6 (it uses none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/readseq/usr/bin/readseq was not linked against libm.so.6 (it uses none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/readseq/usr/bin/readseq was not linked against libncbicdr.so.6 (it uses none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/readseq/usr/bin/readseq was not linked against libncbitool.so.6 (it uses none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/readseq/usr/bin/readseq was not linked against libncbimmdb.so.6 (it uses none of the library's symbols) dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/readseq/usr/bin/readseq was not linked against libncbiid1.so.6 (it uses none of the library's symbols) dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'readseq-dbgsym' in '../readseq-dbgsym_1-13_amd64.deb'. dpkg-deb: building package 'readseq' in '../readseq_1-13_amd64.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../readseq_1-13_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/54495 and its subdirectories I: Current time: Fri Jul 2 22:05:16 -12 2021 I: pbuilder-time-stamp: 1625306716 Sat Jul 3 10:05:16 UTC 2021 I: 1st build successful. Starting 2nd build on remote node ionos5-amd64.debian.net. Sat Jul 3 10:05:17 UTC 2021 I: Preparing to do remote build '2' on ionos5-amd64.debian.net. Sat Jul 3 10:05:53 UTC 2021 I: Deleting $TMPDIR on ionos5-amd64.debian.net. Sat Jul 3 10:05:53 UTC 2021 I: readseq_1-13_amd64.changes: Format: 1.8 Date: Sat, 23 Jun 2018 12:29:20 +0200 Source: readseq Binary: readseq readseq-dbgsym Architecture: amd64 Version: 1-13 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Liubov Chuprikova Description: readseq - Conversion between sequence formats Closes: 890784 Changes: readseq (1-13) unstable; urgency=medium . * Team upload. * Add a patch to fix tests * Add autopkgtest Closes: #890784 * Point Vcs fields to salsa.debian.org * Standards-Version: 4.1.4 * debhelper 11 Checksums-Sha1: 7c9ee9aa79a5bf148c9688648552c87ddd95cb5c 58752 readseq-dbgsym_1-13_amd64.deb 15d31b7e957a55fc2af77f91b0e96b6435b9302b 4938 readseq_1-13_amd64.buildinfo 40ff40164170108b6c35dbd2677ce015d3650ac0 56012 readseq_1-13_amd64.deb Checksums-Sha256: 22be1c6ff307a8b626863b131596f2f706dee337efe662286091478c0c804b61 58752 readseq-dbgsym_1-13_amd64.deb a3ee8cc4511fce31f9e7d456a77c9bfcb77e34d163527b74f5623bd22b7d228d 4938 readseq_1-13_amd64.buildinfo 142d928f806c3d195653fe4bfa492f9eb11fa55f0d35c9952c8272aa3e0ab06c 56012 readseq_1-13_amd64.deb Files: 8d074629fb52592292fbbc95619169ad 58752 debug optional readseq-dbgsym_1-13_amd64.deb d45c4790f8fc4d643ced63d9fbbeef72 4938 science optional readseq_1-13_amd64.buildinfo 4a0e1c46881aca129496e7b438835b74 56012 science optional readseq_1-13_amd64.deb Sat Jul 3 10:07:04 UTC 2021 I: diffoscope 177 will be used to compare the two builds: # Profiling output for: /usr/bin/diffoscope --html /srv/reproducible-results/rbuild-debian/tmp.UB32jFmVb5/readseq_1-13.diffoscope.html --text /srv/reproducible-results/rbuild-debian/tmp.UB32jFmVb5/readseq_1-13.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/tmp.UB32jFmVb5/readseq_1-13.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/tmp.UB32jFmVb5/b1/readseq_1-13_amd64.changes /srv/reproducible-results/rbuild-debian/tmp.UB32jFmVb5/b2/readseq_1-13_amd64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 1.665s) 1.665s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.067s) 0.067s 10 calls diffoscope.comparators.binary.FilesystemFile 0.000s 8 calls abc.DotChangesFile Sat Jul 3 10:07:57 UTC 2021 I: diffoscope 177 found no differences in the changes files, and a .buildinfo file also exists. Sat Jul 3 10:07:57 UTC 2021 I: readseq from buster built successfully and reproducibly on amd64. Sat Jul 3 10:07:59 UTC 2021 I: Submitting .buildinfo files to external archives: Sat Jul 3 10:07:59 UTC 2021 I: Submitting 8.0K b1/readseq_1-13_amd64.buildinfo.asc Sat Jul 3 10:08:00 UTC 2021 I: Submitting 8.0K b2/readseq_1-13_amd64.buildinfo.asc Sat Jul 3 10:08:02 UTC 2021 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Sat Jul 3 10:08:02 UTC 2021 I: Done submitting .buildinfo files. Sat Jul 3 10:08:02 UTC 2021 I: Removing signed readseq_1-13_amd64.buildinfo.asc files: removed './b1/readseq_1-13_amd64.buildinfo.asc' removed './b2/readseq_1-13_amd64.buildinfo.asc'