Mon Apr 5 16:58:37 UTC 2021 I: starting to build pnetcdf/buster/amd64 on jenkins on '2021-04-05 16:58' Mon Apr 5 16:58:37 UTC 2021 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/amd64_13/46351/console.log Mon Apr 5 16:58:37 UTC 2021 I: Downloading source for buster/pnetcdf=1.10.0-3 --2021-04-05 16:58:37-- http://deb.debian.org/debian/pool/main/p/pnetcdf/pnetcdf_1.10.0-3.dsc Connecting to 78.137.99.97:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2411 (2.4K) Saving to: ‘pnetcdf_1.10.0-3.dsc’ 0K .. 100% 107M=0s 2021-04-05 16:58:37 (107 MB/s) - ‘pnetcdf_1.10.0-3.dsc’ saved [2411/2411] Mon Apr 5 16:58:37 UTC 2021 I: pnetcdf_1.10.0-3.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: pnetcdf Binary: libpnetcdf-dev, pnetcdf-bin, libpnetcdf0d Architecture: amd64 arm64 mips64el ppc64el s390x alpha ia64 sparc64 kfreebsd-amd64 ppc64 riscv64 Version: 1.10.0-3 Maintainer: Alastair McKinstry Homepage: https://trac.mcs.anl.gov/projects/parallel-netcdf Standards-Version: 4.2.1 Vcs-Browser: https://salsa.debian.org:/science-team/pnetcdf.git Vcs-Git: https://salsa.debian.org:/science-team/pnetcdf.git Build-Depends: debhelper (>= 10), gfortran, dh-fortran-mod (>= 0.7), mpi-default-dev, libutf8proc-dev, chrpath, texlive-latex-base, ghostscript Package-List: libpnetcdf-dev deb libdevel optional arch=amd64,arm64,mips64el,ppc64el,s390x,alpha,ia64,sparc64,kfreebsd-amd64,ppc64,riscv64 libpnetcdf0d deb libs optional arch=amd64,arm64,mips64el,ppc64el,s390x,alpha,ia64,sparc64,kfreebsd-amd64,ppc64,riscv64 pnetcdf-bin deb science optional arch=amd64,arm64,mips64el,ppc64el,s390x,alpha,ia64,sparc64,kfreebsd-amd64,ppc64,riscv64 Checksums-Sha1: ee4540f3b7b9450e4285759cea1e57287e30874c 1419080 pnetcdf_1.10.0.orig.tar.xz 6f2b855df9e1713aac5c7e6593da26e1ae29bfd4 6216 pnetcdf_1.10.0-3.debian.tar.xz Checksums-Sha256: ed7946574c57ed22aee90d002dd27d60326ca7e70a48e275b848bbb94295af75 1419080 pnetcdf_1.10.0.orig.tar.xz 27e9645abc0c5b358752c05de6d0b6e1533c20e44fcd605ba76afe18395dabc8 6216 pnetcdf_1.10.0-3.debian.tar.xz Files: d0e4bb29dce786153137b0167be1cfd6 1419080 pnetcdf_1.10.0.orig.tar.xz fe64e4992b4a597d6e6c4e633c08d5f2 6216 pnetcdf_1.10.0-3.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQIzBAEBCAAdFiEEgjg86RZbNHx4cIGiy+a7Tl2a06UFAlwczlEACgkQy+a7Tl2a 06VecxAAmmL5RcbkIlZVYAUn3ldgfjoXEde3paf74j994hRAddVwwAbaSgZ90dfu jOHqg9m1soBNAR7tsO1v+EYM72+o5KU5ug78tzCAhdPqBrNsXc+XLJDgQjlt/wgs XffwaPsf8gvtRIrA7Bd5VOp2ptLcJksWAJy/vLLm3U7S26IKD2zuK/28gW8ONkmc bZsHyTAIUkD10ExpyfkMih8ms4lh/iG1EkOb25mYc5h6g9wkigHlH8YI26fk1ntV kVSVw+f21bVTPrSoACZ88Fm9GiVFevsoYCjzNcqJqUEQpB1GVhTBuSw9aQX6stpe tC+R6vzIhZCvqUcOCRJ+Q/JtnraF6ZdLA2t+5EICKH4F+3Rh9gOy4x+/GDNCvwsK MYvNfXmdJdUdNQtC5ve6damur9U7ikb5UsYBqMqy4EI9oAJ9cjjhCWZaeWX/v67m Tx9KXidwAWKCJl5lXil15P4j7Cl8JaIgxEueEIdk4yOW/GkGGptUyN/1LxB9CsZ2 UUhtS2mK/RJz5FQdsHTwza1dp9jKjfq/ovMF10yk3f3556Q+x0ojpxhAy/8Vgo2b T5NWd2+SD9yauPhCot/jm+c+uW3lGlYJmiz1NHNLHO1f1afRcDtArMQtMVrCcxdG FohXPZv4TkN3vDgnMmCLaUFFdGCJPlL7cZvPwH9DUJ3najyBSzg= =0Y8J -----END PGP SIGNATURE----- Mon Apr 5 16:58:37 UTC 2021 I: Checking whether the package is not for us Mon Apr 5 16:58:37 UTC 2021 I: Starting 1st build on remote node ionos11-amd64.debian.net. Mon Apr 5 16:58:37 UTC 2021 I: Preparing to do remote build '1' on ionos11-amd64.debian.net. Mon Apr 5 18:38:14 UTC 2021 I: Deleting $TMPDIR on ionos11-amd64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Mon Apr 5 04:58:40 -12 2021 I: pbuilder-time-stamp: 1617641920 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/buster-reproducible-base.tgz] I: copying local configuration I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [pnetcdf_1.10.0-3.dsc] I: copying [./pnetcdf_1.10.0.orig.tar.xz] I: copying [./pnetcdf_1.10.0-3.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/root/.gnupg/trustedkeys.kbx': General error gpgv: Signature made Thu Dec 20 23:28:17 2018 -12 gpgv: using RSA key 82383CE9165B347C787081A2CBE6BB4E5D9AD3A5 gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./pnetcdf_1.10.0-3.dsc dpkg-source: info: extracting pnetcdf in pnetcdf-1.10.0 dpkg-source: info: unpacking pnetcdf_1.10.0.orig.tar.xz dpkg-source: info: unpacking pnetcdf_1.10.0-3.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying disable-erange-fill-test.patch dpkg-source: info: applying manpages.patch I: using fakeroot in build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/12045/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='amd64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=15' DISTRIBUTION='' HOME='/root' HOST_ARCH='amd64' IFS=' ' INVOCATION_ID='e59ee64760c240bf9746713b71a6f4a5' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='12045' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.GnYpIRzQHa/pbuilderrc_zqq7 --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/buster-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.GnYpIRzQHa/b1 --logfile b1/build.log pnetcdf_1.10.0-3.dsc' SUDO_GID='111' SUDO_UID='106' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://78.137.99.97:3128' I: uname -a Linux ionos11-amd64 4.19.0-16-amd64 #1 SMP Debian 4.19.181-1 (2021-03-19) x86_64 GNU/Linux I: ls -l /bin total 5116 -rwxr-xr-x 1 root root 1168776 Apr 17 2019 bash -rwxr-xr-x 3 root root 38984 Jul 10 2019 bunzip2 -rwxr-xr-x 3 root root 38984 Jul 10 2019 bzcat lrwxrwxrwx 1 root root 6 Jul 10 2019 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2227 Jul 10 2019 bzdiff lrwxrwxrwx 1 root root 6 Jul 10 2019 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4877 Jun 24 2019 bzexe lrwxrwxrwx 1 root root 6 Jul 10 2019 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3641 Jul 10 2019 bzgrep -rwxr-xr-x 3 root root 38984 Jul 10 2019 bzip2 -rwxr-xr-x 1 root root 14328 Jul 10 2019 bzip2recover lrwxrwxrwx 1 root root 6 Jul 10 2019 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Jul 10 2019 bzmore -rwxr-xr-x 1 root root 43744 Feb 28 2019 cat -rwxr-xr-x 1 root root 64320 Feb 28 2019 chgrp -rwxr-xr-x 1 root root 64288 Feb 28 2019 chmod -rwxr-xr-x 1 root root 72512 Feb 28 2019 chown -rwxr-xr-x 1 root root 146880 Feb 28 2019 cp -rwxr-xr-x 1 root root 121464 Jan 17 2019 dash -rwxr-xr-x 1 root root 109408 Feb 28 2019 date -rwxr-xr-x 1 root root 76712 Feb 28 2019 dd -rwxr-xr-x 1 root root 93744 Feb 28 2019 df -rwxr-xr-x 1 root root 138856 Feb 28 2019 dir -rwxr-xr-x 1 root root 84288 Jan 9 2019 dmesg lrwxrwxrwx 1 root root 8 Sep 26 2018 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Sep 26 2018 domainname -> hostname -rwxr-xr-x 1 root root 39520 Feb 28 2019 echo -rwxr-xr-x 1 root root 28 Jan 7 2019 egrep -rwxr-xr-x 1 root root 35424 Feb 28 2019 false -rwxr-xr-x 1 root root 28 Jan 7 2019 fgrep -rwxr-xr-x 1 root root 68880 Jan 9 2019 findmnt -rwsr-xr-x 1 root root 34896 Apr 22 2020 fusermount -rwxr-xr-x 1 root root 198976 Jan 7 2019 grep -rwxr-xr-x 2 root root 2345 Jan 5 2019 gunzip -rwxr-xr-x 1 root root 6375 Jan 5 2019 gzexe -rwxr-xr-x 1 root root 98048 Jan 5 2019 gzip -rwxr-xr-x 1 root root 26696 Sep 26 2018 hostname -rwxr-xr-x 1 root root 68552 Feb 28 2019 ln -rwxr-xr-x 1 root root 56760 Jul 26 2018 login -rwxr-xr-x 1 root root 138856 Feb 28 2019 ls -rwxr-xr-x 1 root root 108624 Jan 9 2019 lsblk -rwxr-xr-x 1 root root 89088 Feb 28 2019 mkdir -rwxr-xr-x 1 root root 68544 Feb 28 2019 mknod -rwxr-xr-x 1 root root 43808 Feb 28 2019 mktemp -rwxr-xr-x 1 root root 43008 Jan 9 2019 more -rwsr-xr-x 1 root root 51280 Jan 9 2019 mount -rwxr-xr-x 1 root root 14408 Jan 9 2019 mountpoint -rwxr-xr-x 1 root root 138728 Feb 28 2019 mv lrwxrwxrwx 1 root root 8 Sep 26 2018 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Feb 14 2019 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 39616 Feb 28 2019 pwd lrwxrwxrwx 1 root root 4 Apr 17 2019 rbash -> bash -rwxr-xr-x 1 root root 47776 Feb 28 2019 readlink -rwxr-xr-x 1 root root 68416 Feb 28 2019 rm -rwxr-xr-x 1 root root 47776 Feb 28 2019 rmdir -rwxr-xr-x 1 root root 23312 Jan 21 2019 run-parts -rwxr-xr-x 1 root root 122224 Dec 22 2018 sed lrwxrwxrwx 1 root root 4 Mar 20 20:25 sh -> dash -rwxr-xr-x 1 root root 39552 Feb 28 2019 sleep -rwxr-xr-x 1 root root 80672 Feb 28 2019 stty -rwsr-xr-x 1 root root 63568 Jan 9 2019 su -rwxr-xr-x 1 root root 35488 Feb 28 2019 sync -rwxr-xr-x 1 root root 445560 Apr 23 2019 tar -rwxr-xr-x 1 root root 14440 Jan 21 2019 tempfile -rwxr-xr-x 1 root root 97152 Feb 28 2019 touch -rwxr-xr-x 1 root root 35424 Feb 28 2019 true -rwxr-xr-x 1 root root 14328 Apr 22 2020 ulockmgr_server -rwsr-xr-x 1 root root 34888 Jan 9 2019 umount -rwxr-xr-x 1 root root 39584 Feb 28 2019 uname -rwxr-xr-x 2 root root 2345 Jan 5 2019 uncompress -rwxr-xr-x 1 root root 138856 Feb 28 2019 vdir -rwxr-xr-x 1 root root 34896 Jan 9 2019 wdctl -rwxr-xr-x 1 root root 946 Jan 21 2019 which lrwxrwxrwx 1 root root 8 Sep 26 2018 ypdomainname -> hostname -rwxr-xr-x 1 root root 1983 Jan 5 2019 zcat -rwxr-xr-x 1 root root 1677 Jan 5 2019 zcmp -rwxr-xr-x 1 root root 5879 Jan 5 2019 zdiff -rwxr-xr-x 1 root root 29 Jan 5 2019 zegrep -rwxr-xr-x 1 root root 29 Jan 5 2019 zfgrep -rwxr-xr-x 1 root root 2080 Jan 5 2019 zforce -rwxr-xr-x 1 root root 7584 Jan 5 2019 zgrep -rwxr-xr-x 1 root root 2205 Jan 5 2019 zless -rwxr-xr-x 1 root root 1841 Jan 5 2019 zmore -rwxr-xr-x 1 root root 4552 Jan 5 2019 znew I: user script /srv/workspace/pbuilder/12045/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper (>= 10), gfortran, dh-fortran-mod (>= 0.7), mpi-default-dev, libutf8proc-dev, chrpath, texlive-latex-base, ghostscript dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19195 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper (>= 10); however: Package debhelper is not installed. pbuilder-satisfydepends-dummy depends on gfortran; however: Package gfortran is not installed. pbuilder-satisfydepends-dummy depends on dh-fortran-mod (>= 0.7); however: Package dh-fortran-mod is not installed. pbuilder-satisfydepends-dummy depends on mpi-default-dev; however: Package mpi-default-dev is not installed. pbuilder-satisfydepends-dummy depends on libutf8proc-dev; however: Package libutf8proc-dev is not installed. pbuilder-satisfydepends-dummy depends on chrpath; however: Package chrpath is not installed. pbuilder-satisfydepends-dummy depends on texlive-latex-base; however: Package texlive-latex-base is not installed. pbuilder-satisfydepends-dummy depends on ghostscript; however: Package ghostscript is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdmainutils{a} chrpath{a} debhelper{a} dh-autoreconf{a} dh-fortran-mod{a} dh-strip-nondeterminism{a} dwz{a} file{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-lmodern{a} gettext{a} gettext-base{a} gfortran{a} gfortran-8{a} ghostscript{a} groff-base{a} ibverbs-providers{a} intltool-debian{a} libarchive-zip-perl{a} libavahi-client3{a} libavahi-common-data{a} libavahi-common3{a} libbrotli1{a} libbsd0{a} libcairo2{a} libcroco3{a} libcups2{a} libcupsimage2{a} libdbus-1-3{a} libedit2{a} libelf1{a} libevent-2.1-6{a} libevent-core-2.1-6{a} libevent-pthreads-2.1-6{a} libexpat1{a} libfabric1{a} libfile-libmagic-perl{a} libfile-stripnondeterminism-perl{a} libfontconfig1{a} libfreetype6{a} libgfortran-8-dev{a} libgfortran5{a} libglib2.0-0{a} libgraphite2-3{a} libgs9{a} libgs9-common{a} libgssapi-krb5-2{a} libharfbuzz-icu0{a} libharfbuzz0b{a} libhwloc-dev{a} libhwloc-plugins{a} libhwloc5{a} libibverbs-dev{a} libibverbs1{a} libice6{a} libicu63{a} libidn11{a} libijs-0.35{a} libjbig0{a} libjbig2dec0{a} libjpeg62-turbo{a} libk5crypto3{a} libkeyutils1{a} libkpathsea6{a} libkrb5-3{a} libkrb5support0{a} liblcms2-2{a} libltdl-dev{a} libltdl7{a} libmagic-mgc{a} libmagic1{a} libncurses6{a} libnl-3-200{a} libnl-3-dev{a} libnl-route-3-200{a} libnl-route-3-dev{a} libnuma-dev{a} libnuma1{a} libopenjp2-7{a} libopenmpi-dev{a} libopenmpi3{a} libpaper-utils{a} libpaper1{a} libpciaccess0{a} libpipeline1{a} libpixman-1-0{a} libpmix2{a} libpng16-16{a} libpotrace0{a} libpsm-infinipath1{a} libpsm2-2{a} libptexenc1{a} librdmacm1{a} libsigsegv2{a} libsm6{a} libssl1.1{a} libsynctex2{a} libteckit0{a} libtexlua52{a} libtexlua53{a} libtexluajit2{a} libtiff5{a} libtool{a} libuchardet0{a} libutf8proc-dev{a} libutf8proc2{a} libwebp6{a} libwoff1{a} libx11-6{a} libx11-data{a} libxau6{a} libxaw7{a} libxcb-render0{a} libxcb-shm0{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxi6{a} libxml2{a} libxmu6{a} libxpm4{a} libxrender1{a} libxt6{a} libxxhash0{a} libzzip-0-13{a} lsb-base{a} m4{a} man-db{a} mpi-default-dev{a} ocl-icd-libopencl1{a} openmpi-bin{a} openmpi-common{a} openssh-client{a} po-debconf{a} poppler-data{a} sensible-utils{a} t1utils{a} tex-common{a} texlive-base{a} texlive-binaries{a} texlive-latex-base{a} ucf{a} x11-common{a} xdg-utils{a} The following packages are RECOMMENDED but will NOT be installed: curl dbus fonts-droid-fallback gsfonts krb5-locales libarchive-cpio-perl libcoarrays-openmpi-dev libcupsfilters1 libfile-mimeinfo-perl libglib2.0-data libgpm2 libmail-sendmail-perl libnet-dbus-perl libx11-protocol-perl lmodern lynx shared-mime-info wget x11-utils x11-xserver-utils xauth xdg-user-dirs 0 packages upgraded, 149 newly installed, 0 to remove and 0 not upgraded. Need to get 97.9 MB of archives. After unpacking 341 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian buster/main amd64 libbsd0 amd64 0.9.1-2+deb10u1 [99.5 kB] Get: 2 http://deb.debian.org/debian buster/main amd64 bsdmainutils amd64 11.1.2+b1 [191 kB] Get: 3 http://deb.debian.org/debian buster/main amd64 libuchardet0 amd64 0.0.6-3 [64.9 kB] Get: 4 http://deb.debian.org/debian buster/main amd64 groff-base amd64 1.22.4-3+deb10u1 [916 kB] Get: 5 http://deb.debian.org/debian buster/main amd64 libpipeline1 amd64 1.5.1-2 [31.2 kB] Get: 6 http://deb.debian.org/debian buster/main amd64 man-db amd64 2.8.5-2 [1274 kB] Get: 7 http://deb.debian.org/debian buster/main amd64 poppler-data all 0.4.9-2 [1473 kB] Get: 8 http://deb.debian.org/debian buster/main amd64 sensible-utils all 0.0.12 [15.8 kB] Get: 9 http://deb.debian.org/debian buster/main amd64 ucf all 3.0038+nmu1 [69.0 kB] Get: 10 http://deb.debian.org/debian buster/main amd64 tex-common all 6.11 [53.1 kB] Get: 11 http://deb.debian.org/debian buster/main amd64 libmagic-mgc amd64 1:5.35-4+deb10u2 [242 kB] Get: 12 http://deb.debian.org/debian buster/main amd64 libmagic1 amd64 1:5.35-4+deb10u2 [118 kB] Get: 13 http://deb.debian.org/debian buster/main amd64 file amd64 1:5.35-4+deb10u2 [66.4 kB] Get: 14 http://deb.debian.org/debian buster/main amd64 gettext-base amd64 0.19.8.1-9 [123 kB] Get: 15 http://deb.debian.org/debian buster/main amd64 libedit2 amd64 3.1-20181209-1 [94.0 kB] Get: 16 http://deb.debian.org/debian buster/main amd64 libkeyutils1 amd64 1.6-6 [15.0 kB] Get: 17 http://deb.debian.org/debian buster/main amd64 libkrb5support0 amd64 1.17-3+deb10u1 [65.8 kB] Get: 18 http://deb.debian.org/debian buster/main amd64 libk5crypto3 amd64 1.17-3+deb10u1 [122 kB] Get: 19 http://deb.debian.org/debian buster/main amd64 libssl1.1 amd64 1.1.1d-0+deb10u5 [1539 kB] Get: 20 http://deb.debian.org/debian buster/main amd64 libkrb5-3 amd64 1.17-3+deb10u1 [369 kB] Get: 21 http://deb.debian.org/debian buster/main amd64 libgssapi-krb5-2 amd64 1.17-3+deb10u1 [158 kB] Get: 22 http://deb.debian.org/debian buster/main amd64 openssh-client amd64 1:7.9p1-10+deb10u2 [782 kB] Get: 23 http://deb.debian.org/debian buster/main amd64 libsigsegv2 amd64 2.12-2 [32.8 kB] Get: 24 http://deb.debian.org/debian buster/main amd64 m4 amd64 1.4.18-2 [203 kB] Get: 25 http://deb.debian.org/debian buster/main amd64 autoconf all 2.69-11 [341 kB] Get: 26 http://deb.debian.org/debian buster/main amd64 autotools-dev all 20180224.1 [77.0 kB] Get: 27 http://deb.debian.org/debian buster/main amd64 automake all 1:1.16.1-4 [771 kB] Get: 28 http://deb.debian.org/debian buster/main amd64 autopoint all 0.19.8.1-9 [434 kB] Get: 29 http://deb.debian.org/debian buster/main amd64 chrpath amd64 0.16-2+b1 [17.1 kB] Get: 30 http://deb.debian.org/debian buster/main amd64 libtool all 2.4.6-9 [547 kB] Get: 31 http://deb.debian.org/debian buster/main amd64 dh-autoreconf all 19 [16.9 kB] Get: 32 http://deb.debian.org/debian buster/main amd64 libarchive-zip-perl all 1.64-1 [96.8 kB] Get: 33 http://deb.debian.org/debian buster/main amd64 libfile-stripnondeterminism-perl all 1.1.2-1 [19.8 kB] Get: 34 http://deb.debian.org/debian buster/main amd64 dh-strip-nondeterminism all 1.1.2-1 [13.0 kB] Get: 35 http://deb.debian.org/debian buster/main amd64 libelf1 amd64 0.176-1.1 [161 kB] Get: 36 http://deb.debian.org/debian buster/main amd64 dwz amd64 0.12-3 [78.0 kB] Get: 37 http://deb.debian.org/debian buster/main amd64 libglib2.0-0 amd64 2.58.3-2+deb10u2 [1258 kB] Get: 38 http://deb.debian.org/debian buster/main amd64 libicu63 amd64 63.1-6+deb10u1 [8300 kB] Get: 39 http://deb.debian.org/debian buster/main amd64 libxml2 amd64 2.9.4+dfsg1-7+deb10u1 [689 kB] Get: 40 http://deb.debian.org/debian buster/main amd64 libcroco3 amd64 0.6.12-3 [145 kB] Get: 41 http://deb.debian.org/debian buster/main amd64 libncurses6 amd64 6.1+20181013-2+deb10u2 [102 kB] Get: 42 http://deb.debian.org/debian buster/main amd64 gettext amd64 0.19.8.1-9 [1303 kB] Get: 43 http://deb.debian.org/debian buster/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get: 44 http://deb.debian.org/debian buster/main amd64 po-debconf all 1.0.21 [248 kB] Get: 45 http://deb.debian.org/debian buster/main amd64 debhelper all 12.1.1 [1016 kB] Get: 46 http://deb.debian.org/debian buster/main amd64 libfile-libmagic-perl amd64 1.16-1+b1 [24.8 kB] Get: 47 http://deb.debian.org/debian buster/main amd64 dh-fortran-mod all 0.12 [11.2 kB] Get: 48 http://deb.debian.org/debian buster/main amd64 fonts-dejavu-core all 2.37-1 [1068 kB] Get: 49 http://deb.debian.org/debian buster/main amd64 fontconfig-config all 2.13.1-2 [280 kB] Get: 50 http://deb.debian.org/debian buster/main amd64 fonts-lmodern all 2.004.5-6 [4539 kB] Get: 51 http://deb.debian.org/debian buster/main amd64 libgfortran5 amd64 8.3.0-6 [581 kB] Get: 52 http://deb.debian.org/debian buster/main amd64 libgfortran-8-dev amd64 8.3.0-6 [616 kB] Get: 53 http://deb.debian.org/debian buster/main amd64 gfortran-8 amd64 8.3.0-6 [9375 kB] Get: 54 http://deb.debian.org/debian buster/main amd64 gfortran amd64 4:8.3.0-1 [1432 B] Get: 55 http://deb.debian.org/debian buster/main amd64 libgs9-common all 9.27~dfsg-2+deb10u4 [5136 kB] Get: 56 http://deb.debian.org/debian buster/main amd64 libavahi-common-data amd64 0.7-4+deb10u1 [122 kB] Get: 57 http://deb.debian.org/debian buster/main amd64 libavahi-common3 amd64 0.7-4+deb10u1 [54.4 kB] Get: 58 http://deb.debian.org/debian buster/main amd64 libdbus-1-3 amd64 1.12.20-0+deb10u1 [215 kB] Get: 59 http://deb.debian.org/debian buster/main amd64 libavahi-client3 amd64 0.7-4+deb10u1 [58.2 kB] Get: 60 http://deb.debian.org/debian buster/main amd64 libcups2 amd64 2.2.10-6+deb10u4 [324 kB] Get: 61 http://deb.debian.org/debian buster/main amd64 libcupsimage2 amd64 2.2.10-6+deb10u4 [133 kB] Get: 62 http://deb.debian.org/debian buster/main amd64 libexpat1 amd64 2.2.6-2+deb10u1 [106 kB] Get: 63 http://deb.debian.org/debian buster/main amd64 libpng16-16 amd64 1.6.36-6 [292 kB] Get: 64 http://deb.debian.org/debian buster/main amd64 libfreetype6 amd64 2.9.1-3+deb10u2 [380 kB] Get: 65 http://deb.debian.org/debian buster/main amd64 libfontconfig1 amd64 2.13.1-2 [346 kB] Get: 66 http://deb.debian.org/debian buster/main amd64 libidn11 amd64 1.33-2.2 [116 kB] Get: 67 http://deb.debian.org/debian buster/main amd64 libijs-0.35 amd64 0.35-14 [18.3 kB] Get: 68 http://deb.debian.org/debian buster/main amd64 libjbig2dec0 amd64 0.16-1 [62.0 kB] Get: 69 http://deb.debian.org/debian buster/main amd64 libjpeg62-turbo amd64 1:1.5.2-2+deb10u1 [133 kB] Get: 70 http://deb.debian.org/debian buster/main amd64 liblcms2-2 amd64 2.9-3 [145 kB] Get: 71 http://deb.debian.org/debian buster/main amd64 libopenjp2-7 amd64 2.3.0-2+deb10u1 [158 kB] Get: 72 http://deb.debian.org/debian buster/main amd64 libpaper1 amd64 1.1.28 [21.3 kB] Get: 73 http://deb.debian.org/debian buster/main amd64 libjbig0 amd64 2.1-3.1+b2 [31.0 kB] Get: 74 http://deb.debian.org/debian buster/main amd64 libwebp6 amd64 0.6.1-2 [263 kB] Get: 75 http://deb.debian.org/debian buster/main amd64 libtiff5 amd64 4.1.0+git191117-2~deb10u2 [271 kB] Get: 76 http://deb.debian.org/debian buster/main amd64 libgs9 amd64 9.27~dfsg-2+deb10u4 [2195 kB] Get: 77 http://deb.debian.org/debian buster/main amd64 ghostscript amd64 9.27~dfsg-2+deb10u4 [94.9 kB] Get: 78 http://deb.debian.org/debian buster/main amd64 libnl-3-200 amd64 3.4.0-1 [63.0 kB] Get: 79 http://deb.debian.org/debian buster/main amd64 libnl-route-3-200 amd64 3.4.0-1 [162 kB] Get: 80 http://deb.debian.org/debian buster/main amd64 libibverbs1 amd64 22.1-1 [51.2 kB] Get: 81 http://deb.debian.org/debian buster/main amd64 ibverbs-providers amd64 22.1-1 [187 kB] Get: 82 http://deb.debian.org/debian buster/main amd64 libbrotli1 amd64 1.0.7-2+deb10u1 [269 kB] Get: 83 http://deb.debian.org/debian buster/main amd64 libpixman-1-0 amd64 0.36.0-1 [537 kB] Get: 84 http://deb.debian.org/debian buster/main amd64 libxau6 amd64 1:1.0.8-1+b2 [19.9 kB] Get: 85 http://deb.debian.org/debian buster/main amd64 libxdmcp6 amd64 1:1.1.2-3 [26.3 kB] Get: 86 http://deb.debian.org/debian buster/main amd64 libxcb1 amd64 1.13.1-2 [137 kB] Get: 87 http://deb.debian.org/debian buster/main amd64 libx11-data all 2:1.6.7-1+deb10u1 [294 kB] Get: 88 http://deb.debian.org/debian buster/main amd64 libx11-6 amd64 2:1.6.7-1+deb10u1 [757 kB] Get: 89 http://deb.debian.org/debian buster/main amd64 libxcb-render0 amd64 1.13.1-2 [109 kB] Get: 90 http://deb.debian.org/debian buster/main amd64 libxcb-shm0 amd64 1.13.1-2 [99.2 kB] Get: 91 http://deb.debian.org/debian buster/main amd64 libxext6 amd64 2:1.3.3-1+b2 [52.5 kB] Get: 92 http://deb.debian.org/debian buster/main amd64 libxrender1 amd64 1:0.9.10-1 [33.0 kB] Get: 93 http://deb.debian.org/debian buster/main amd64 libcairo2 amd64 1.16.0-4+deb10u1 [688 kB] Get: 94 http://deb.debian.org/debian buster/main amd64 libevent-2.1-6 amd64 2.1.8-stable-4 [177 kB] Get: 95 http://deb.debian.org/debian buster/main amd64 libevent-core-2.1-6 amd64 2.1.8-stable-4 [129 kB] Get: 96 http://deb.debian.org/debian buster/main amd64 libevent-pthreads-2.1-6 amd64 2.1.8-stable-4 [47.9 kB] Get: 97 http://deb.debian.org/debian buster/main amd64 libpsm-infinipath1 amd64 3.3+20.604758e7-6 [168 kB] Get: 98 http://deb.debian.org/debian buster/main amd64 libnuma1 amd64 2.0.12-1 [26.2 kB] Get: 99 http://deb.debian.org/debian buster/main amd64 libpsm2-2 amd64 11.2.78-1 [177 kB] Get: 100 http://deb.debian.org/debian buster/main amd64 librdmacm1 amd64 22.1-1 [65.3 kB] Get: 101 http://deb.debian.org/debian buster/main amd64 libfabric1 amd64 1.6.2-3 [396 kB] Get: 102 http://deb.debian.org/debian buster/main amd64 libgraphite2-3 amd64 1.3.13-7 [80.7 kB] Get: 103 http://deb.debian.org/debian buster/main amd64 libharfbuzz0b amd64 2.3.1-1 [1187 kB] Get: 104 http://deb.debian.org/debian buster/main amd64 libharfbuzz-icu0 amd64 2.3.1-1 [834 kB] Get: 105 http://deb.debian.org/debian buster/main amd64 libltdl7 amd64 2.4.6-9 [390 kB] Get: 106 http://deb.debian.org/debian buster/main amd64 libhwloc5 amd64 1.11.12-3 [111 kB] Get: 107 http://deb.debian.org/debian buster/main amd64 libnuma-dev amd64 2.0.12-1 [39.2 kB] Get: 108 http://deb.debian.org/debian buster/main amd64 libltdl-dev amd64 2.4.6-9 [162 kB] Get: 109 http://deb.debian.org/debian buster/main amd64 libhwloc-dev amd64 1.11.12-3 [175 kB] Get: 110 http://deb.debian.org/debian buster/main amd64 libpciaccess0 amd64 0.14-1 [53.5 kB] Get: 111 http://deb.debian.org/debian buster/main amd64 ocl-icd-libopencl1 amd64 2.2.12-2 [37.5 kB] Get: 112 http://deb.debian.org/debian buster/main amd64 libhwloc-plugins amd64 1.11.12-3 [17.4 kB] Get: 113 http://deb.debian.org/debian buster/main amd64 libnl-3-dev amd64 3.4.0-1 [102 kB] Get: 114 http://deb.debian.org/debian buster/main amd64 libnl-route-3-dev amd64 3.4.0-1 [177 kB] Get: 115 http://deb.debian.org/debian buster/main amd64 libibverbs-dev amd64 22.1-1 [362 kB] Get: 116 http://deb.debian.org/debian buster/main amd64 lsb-base all 10.2019051400 [28.4 kB] Get: 117 http://deb.debian.org/debian buster/main amd64 x11-common all 1:7.7+19 [251 kB] Get: 118 http://deb.debian.org/debian buster/main amd64 libice6 amd64 2:1.0.9-2 [58.7 kB] Get: 119 http://deb.debian.org/debian buster/main amd64 libkpathsea6 amd64 2018.20181218.49446-1 [167 kB] Get: 120 http://deb.debian.org/debian buster/main amd64 libpmix2 amd64 3.1.2-3 [498 kB] Get: 121 http://deb.debian.org/debian buster/main amd64 libopenmpi3 amd64 3.1.3-11 [2191 kB] Get: 122 http://deb.debian.org/debian buster/main amd64 openmpi-common all 3.1.3-11 [165 kB] Get: 123 http://deb.debian.org/debian buster/main amd64 openmpi-bin amd64 3.1.3-11 [200 kB] Get: 124 http://deb.debian.org/debian buster/main amd64 libopenmpi-dev amd64 3.1.3-11 [974 kB] Get: 125 http://deb.debian.org/debian buster/main amd64 libpaper-utils amd64 1.1.28 [18.0 kB] Get: 126 http://deb.debian.org/debian buster/main amd64 libpotrace0 amd64 1.15-1 [26.3 kB] Get: 127 http://deb.debian.org/debian buster/main amd64 libptexenc1 amd64 2018.20181218.49446-1 [61.0 kB] Get: 128 http://deb.debian.org/debian buster/main amd64 libsm6 amd64 2:1.2.3-1 [35.1 kB] Get: 129 http://deb.debian.org/debian buster/main amd64 libsynctex2 amd64 2018.20181218.49446-1 [80.5 kB] Get: 130 http://deb.debian.org/debian buster/main amd64 libteckit0 amd64 2.5.8+ds2-5 [318 kB] Get: 131 http://deb.debian.org/debian buster/main amd64 libtexlua52 amd64 2018.20181218.49446-1 [112 kB] Get: 132 http://deb.debian.org/debian buster/main amd64 libtexlua53 amd64 2018.20181218.49446-1 [126 kB] Get: 133 http://deb.debian.org/debian buster/main amd64 libtexluajit2 amd64 2018.20181218.49446-1 [256 kB] Get: 134 http://deb.debian.org/debian buster/main amd64 libutf8proc2 amd64 2.3.0-1 [53.0 kB] Get: 135 http://deb.debian.org/debian buster/main amd64 libutf8proc-dev amd64 2.3.0-1 [58.4 kB] Get: 136 http://deb.debian.org/debian buster/main amd64 libwoff1 amd64 1.0.2-1 [43.2 kB] Get: 137 http://deb.debian.org/debian buster/main amd64 libxt6 amd64 1:1.1.5-1+b3 [190 kB] Get: 138 http://deb.debian.org/debian buster/main amd64 libxmu6 amd64 2:1.1.2-2+b3 [60.8 kB] Get: 139 http://deb.debian.org/debian buster/main amd64 libxpm4 amd64 1:3.5.12-1 [49.1 kB] Get: 140 http://deb.debian.org/debian buster/main amd64 libxaw7 amd64 2:1.0.13-1+b2 [201 kB] Get: 141 http://deb.debian.org/debian buster/main amd64 libxi6 amd64 2:1.7.9-1 [82.6 kB] Get: 142 http://deb.debian.org/debian buster/main amd64 libxxhash0 amd64 0.6.5-2 [7156 B] Get: 143 http://deb.debian.org/debian buster/main amd64 libzzip-0-13 amd64 0.13.62-3.2 [55.4 kB] Get: 144 http://deb.debian.org/debian buster/main amd64 mpi-default-dev amd64 1.13 [5476 B] Get: 145 http://deb.debian.org/debian buster/main amd64 t1utils amd64 1.41-3 [62.3 kB] Get: 146 http://deb.debian.org/debian buster/main amd64 texlive-binaries amd64 2018.20181218.49446-1 [11.3 MB] Get: 147 http://deb.debian.org/debian buster/main amd64 xdg-utils all 1.1.3-1+deb10u1 [73.7 kB] Get: 148 http://deb.debian.org/debian buster/main amd64 texlive-base all 2018.20190227-2 [19.7 MB] Get: 149 http://deb.debian.org/debian buster/main amd64 texlive-latex-base all 2018.20190227-2 [984 kB] Fetched 97.9 MB in 6s (16.7 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libbsd0:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19195 files and directories currently installed.) Preparing to unpack .../000-libbsd0_0.9.1-2+deb10u1_amd64.deb ... Unpacking libbsd0:amd64 (0.9.1-2+deb10u1) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../001-bsdmainutils_11.1.2+b1_amd64.deb ... Unpacking bsdmainutils (11.1.2+b1) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../002-libuchardet0_0.0.6-3_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.6-3) ... Selecting previously unselected package groff-base. Preparing to unpack .../003-groff-base_1.22.4-3+deb10u1_amd64.deb ... Unpacking groff-base (1.22.4-3+deb10u1) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../004-libpipeline1_1.5.1-2_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.1-2) ... Selecting previously unselected package man-db. Preparing to unpack .../005-man-db_2.8.5-2_amd64.deb ... Unpacking man-db (2.8.5-2) ... Selecting previously unselected package poppler-data. Preparing to unpack .../006-poppler-data_0.4.9-2_all.deb ... Unpacking poppler-data (0.4.9-2) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../007-sensible-utils_0.0.12_all.deb ... Unpacking sensible-utils (0.0.12) ... Selecting previously unselected package ucf. Preparing to unpack .../008-ucf_3.0038+nmu1_all.deb ... Moving old data out of the way Unpacking ucf (3.0038+nmu1) ... Selecting previously unselected package tex-common. Preparing to unpack .../009-tex-common_6.11_all.deb ... Unpacking tex-common (6.11) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../010-libmagic-mgc_1%3a5.35-4+deb10u2_amd64.deb ... Unpacking libmagic-mgc (1:5.35-4+deb10u2) ... Selecting previously unselected package libmagic1:amd64. Preparing to unpack .../011-libmagic1_1%3a5.35-4+deb10u2_amd64.deb ... Unpacking libmagic1:amd64 (1:5.35-4+deb10u2) ... Selecting previously unselected package file. Preparing to unpack .../012-file_1%3a5.35-4+deb10u2_amd64.deb ... Unpacking file (1:5.35-4+deb10u2) ... Selecting previously unselected package gettext-base. Preparing to unpack .../013-gettext-base_0.19.8.1-9_amd64.deb ... Unpacking gettext-base (0.19.8.1-9) ... Selecting previously unselected package libedit2:amd64. Preparing to unpack .../014-libedit2_3.1-20181209-1_amd64.deb ... Unpacking libedit2:amd64 (3.1-20181209-1) ... Selecting previously unselected package libkeyutils1:amd64. Preparing to unpack .../015-libkeyutils1_1.6-6_amd64.deb ... Unpacking libkeyutils1:amd64 (1.6-6) ... Selecting previously unselected package libkrb5support0:amd64. Preparing to unpack .../016-libkrb5support0_1.17-3+deb10u1_amd64.deb ... Unpacking libkrb5support0:amd64 (1.17-3+deb10u1) ... Selecting previously unselected package libk5crypto3:amd64. Preparing to unpack .../017-libk5crypto3_1.17-3+deb10u1_amd64.deb ... Unpacking libk5crypto3:amd64 (1.17-3+deb10u1) ... Selecting previously unselected package libssl1.1:amd64. Preparing to unpack .../018-libssl1.1_1.1.1d-0+deb10u5_amd64.deb ... Unpacking libssl1.1:amd64 (1.1.1d-0+deb10u5) ... Selecting previously unselected package libkrb5-3:amd64. Preparing to unpack .../019-libkrb5-3_1.17-3+deb10u1_amd64.deb ... Unpacking libkrb5-3:amd64 (1.17-3+deb10u1) ... Selecting previously unselected package libgssapi-krb5-2:amd64. Preparing to unpack .../020-libgssapi-krb5-2_1.17-3+deb10u1_amd64.deb ... Unpacking libgssapi-krb5-2:amd64 (1.17-3+deb10u1) ... Selecting previously unselected package openssh-client. Preparing to unpack .../021-openssh-client_1%3a7.9p1-10+deb10u2_amd64.deb ... Unpacking openssh-client (1:7.9p1-10+deb10u2) ... Selecting previously unselected package libsigsegv2:amd64. Preparing to unpack .../022-libsigsegv2_2.12-2_amd64.deb ... Unpacking libsigsegv2:amd64 (2.12-2) ... Selecting previously unselected package m4. Preparing to unpack .../023-m4_1.4.18-2_amd64.deb ... Unpacking m4 (1.4.18-2) ... Selecting previously unselected package autoconf. Preparing to unpack .../024-autoconf_2.69-11_all.deb ... Unpacking autoconf (2.69-11) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../025-autotools-dev_20180224.1_all.deb ... Unpacking autotools-dev (20180224.1) ... Selecting previously unselected package automake. Preparing to unpack .../026-automake_1%3a1.16.1-4_all.deb ... Unpacking automake (1:1.16.1-4) ... Selecting previously unselected package autopoint. Preparing to unpack .../027-autopoint_0.19.8.1-9_all.deb ... Unpacking autopoint (0.19.8.1-9) ... Selecting previously unselected package chrpath. Preparing to unpack .../028-chrpath_0.16-2+b1_amd64.deb ... Unpacking chrpath (0.16-2+b1) ... Selecting previously unselected package libtool. Preparing to unpack .../029-libtool_2.4.6-9_all.deb ... Unpacking libtool (2.4.6-9) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../030-dh-autoreconf_19_all.deb ... Unpacking dh-autoreconf (19) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../031-libarchive-zip-perl_1.64-1_all.deb ... Unpacking libarchive-zip-perl (1.64-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../032-libfile-stripnondeterminism-perl_1.1.2-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.1.2-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../033-dh-strip-nondeterminism_1.1.2-1_all.deb ... Unpacking dh-strip-nondeterminism (1.1.2-1) ... Selecting previously unselected package libelf1:amd64. Preparing to unpack .../034-libelf1_0.176-1.1_amd64.deb ... Unpacking libelf1:amd64 (0.176-1.1) ... Selecting previously unselected package dwz. Preparing to unpack .../035-dwz_0.12-3_amd64.deb ... Unpacking dwz (0.12-3) ... Selecting previously unselected package libglib2.0-0:amd64. Preparing to unpack .../036-libglib2.0-0_2.58.3-2+deb10u2_amd64.deb ... Unpacking libglib2.0-0:amd64 (2.58.3-2+deb10u2) ... Selecting previously unselected package libicu63:amd64. Preparing to unpack .../037-libicu63_63.1-6+deb10u1_amd64.deb ... Unpacking libicu63:amd64 (63.1-6+deb10u1) ... Selecting previously unselected package libxml2:amd64. 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Setting up libevent-2.1-6:amd64 (2.1.8-stable-4) ... Setting up libnuma1:amd64 (2.0.12-1) ... Setting up sensible-utils (0.0.12) ... Setting up ocl-icd-libopencl1:amd64 (2.2.12-2) ... Setting up libxxhash0:amd64 (0.6.5-2) ... Setting up libuchardet0:amd64 (0.0.6-3) ... Setting up libnl-3-200:amd64 (3.4.0-1) ... Setting up libpsm2-2 (11.2.78-1) ... Setting up openmpi-common (3.1.3-11) ... Setting up fonts-lmodern (2.004.5-6) ... Setting up libopenjp2-7:amd64 (2.3.0-2+deb10u1) ... Setting up libkrb5-3:amd64 (1.17-3+deb10u1) ... Setting up libtiff5:amd64 (4.1.0+git191117-2~deb10u2) ... Setting up libpsm-infinipath1 (3.3+20.604758e7-6) ... update-alternatives: using /usr/lib/libpsm1/libpsm_infinipath.so.1.16 to provide /usr/lib/x86_64-linux-gnu/libpsm_infinipath.so.1 (libpsm_infinipath.so.1) in auto mode Setting up libbsd0:amd64 (0.9.1-2+deb10u1) ... Setting up libelf1:amd64 (0.176-1.1) ... Setting up libxml2:amd64 (2.9.4+dfsg1-7+deb10u1) ... Setting up xdg-utils (1.1.3-1+deb10u1) ... Setting up chrpath (0.16-2+b1) ... Setting up libsynctex2:amd64 (2018.20181218.49446-1) ... Setting up libpotrace0:amd64 (1.15-1) ... Setting up libfile-stripnondeterminism-perl (1.1.2-1) ... Setting up libgfortran-8-dev:amd64 (8.3.0-6) ... Setting up libevent-pthreads-2.1-6:amd64 (2.1.8-stable-4) ... Setting up libice6:amd64 (2:1.0.9-2) ... Setting up libxdmcp6:amd64 (1:1.1.2-3) ... Setting up libxcb1:amd64 (1.13.1-2) ... Setting up libwoff1:amd64 (1.0.2-1) ... Setting up libtool (2.4.6-9) ... Setting up libxcb-render0:amd64 (1.13.1-2) ... Setting up libhwloc5:amd64 (1.11.12-3) ... Setting up gfortran-8 (8.3.0-6) ... Setting up libedit2:amd64 (3.1-20181209-1) ... Setting up libavahi-common3:amd64 (0.7-4+deb10u1) ... Setting up m4 (1.4.18-2) ... Setting up libxcb-shm0:amd64 (1.13.1-2) ... Setting up libhwloc-plugins:amd64 (1.11.12-3) ... Setting up gfortran (4:8.3.0-1) ... update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode Setting up libnuma-dev:amd64 (2.0.12-1) ... Setting up libnl-route-3-200:amd64 (3.4.0-1) ... Setting up libptexenc1:amd64 (2018.20181218.49446-1) ... Setting up libfreetype6:amd64 (2.9.1-3+deb10u2) ... Setting up bsdmainutils (11.1.2+b1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libgssapi-krb5-2:amd64 (1.17-3+deb10u1) ... Setting up libcroco3:amd64 (0.6.12-3) ... Setting up ucf (3.0038+nmu1) ... Setting up autoconf (2.69-11) ... Setting up dwz (0.12-3) ... Setting up libnl-3-dev:amd64 (3.4.0-1) ... Setting up groff-base (1.22.4-3+deb10u1) ... Setting up libx11-6:amd64 (2:1.6.7-1+deb10u1) ... Setting up libharfbuzz0b:amd64 (2.3.1-1) ... Setting up libsm6:amd64 (2:1.2.3-1) ... Setting up libavahi-client3:amd64 (0.7-4+deb10u1) ... Setting up automake (1:1.16.1-4) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libpaper1:amd64 (1.1.28) ... Creating config file /etc/papersize with new version Setting up libibverbs1:amd64 (22.1-1) ... Setting up gettext (0.19.8.1-9) ... Setting up libharfbuzz-icu0:amd64 (2.3.1-1) ... Setting up libxpm4:amd64 (1:3.5.12-1) ... Setting up libxrender1:amd64 (1:0.9.10-1) ... Setting up libpmix2:amd64 (3.1.2-3) ... Setting up ibverbs-providers:amd64 (22.1-1) ... Setting up fontconfig-config (2.13.1-2) ... Setting up openssh-client (1:7.9p1-10+deb10u2) ... Setting up libxext6:amd64 (2:1.3.3-1+b2) ... Setting up libpaper-utils (1.1.28) ... Setting up man-db (2.8.5-2) ... Not building database; man-db/auto-update is not 'true'. Setting up intltool-debian (0.35.0+20060710.5) ... Setting up tex-common (6.11) ... update-language: texlive-base not installed and configured, doing nothing! Setting up libnl-route-3-dev:amd64 (3.4.0-1) ... Setting up libltdl-dev:amd64 (2.4.6-9) ... Setting up libxt6:amd64 (1:1.1.5-1+b3) ... Setting up libcups2:amd64 (2.2.10-6+deb10u4) ... Setting up libhwloc-dev:amd64 (1.11.12-3) ... Setting up libfontconfig1:amd64 (2.13.1-2) ... Setting up librdmacm1:amd64 (22.1-1) ... Setting up libxmu6:amd64 (2:1.1.2-2+b3) ... Setting up libxi6:amd64 (2:1.7.9-1) ... Setting up po-debconf (1.0.21) ... Setting up libxaw7:amd64 (2:1.0.13-1+b2) ... Setting up libibverbs-dev:amd64 (22.1-1) ... Setting up libcairo2:amd64 (1.16.0-4+deb10u1) ... Setting up libcupsimage2:amd64 (2.2.10-6+deb10u4) ... Setting up libfabric1 (1.6.2-3) ... Setting up libgs9:amd64 (9.27~dfsg-2+deb10u4) ... Setting up libopenmpi3:amd64 (3.1.3-11) ... Setting up ghostscript (9.27~dfsg-2+deb10u4) ... Setting up texlive-binaries (2018.20181218.49446-1) ... update-alternatives: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin (xdvi.bin) in auto mode update-alternatives: using /usr/bin/bibtex.original to provide /usr/bin/bibtex (bibtex) in auto mode Setting up texlive-base (2018.20190227-2) ... tl-paper: setting paper size for dvips to a4: /var/lib/texmf/dvips/config/config-paper.ps tl-paper: setting paper size for dvipdfmx to a4: /var/lib/texmf/dvipdfmx/dvipdfmx-paper.cfg tl-paper: setting paper size for xdvi to a4: /var/lib/texmf/xdvi/XDvi-paper tl-paper: setting paper size for pdftex to a4: /var/lib/texmf/tex/generic/config/pdftexconfig.tex Setting up openmpi-bin (3.1.3-11) ... update-alternatives: using /usr/bin/mpirun.openmpi to provide /usr/bin/mpirun (mpirun) in auto mode update-alternatives: using /usr/bin/mpicc.openmpi to provide /usr/bin/mpicc (mpi) in auto mode Setting up texlive-latex-base (2018.20190227-2) ... Setting up libopenmpi-dev:amd64 (3.1.3-11) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/openmpi/include to provide /usr/include/x86_64-linux-gnu/mpi (mpi-x86_64-linux-gnu) in auto mode Setting up mpi-default-dev (1.13) ... Setting up dh-autoreconf (19) ... Setting up debhelper (12.1.1) ... Setting up dh-fortran-mod (0.12) ... Setting up dh-strip-nondeterminism (1.1.2-1) ... Processing triggers for libc-bin (2.28-10) ... Processing triggers for tex-common (6.11) ... Running updmap-sys. This may take some time... done. Running mktexlsr /var/lib/texmf ... done. Building format(s) --all. This may take some time... done. Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps Reading package lists... Building dependency tree... Reading state information... fakeroot is already the newest version (1.23-1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package I: Running cd /build/pnetcdf-1.10.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b dpkg-buildpackage: info: source package pnetcdf dpkg-buildpackage: info: source version 1.10.0-3 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Alastair McKinstry dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 dpkg-source: warning: unknown information field 'Fortran-Mod' in input data in package's section of control info file fakeroot debian/rules clean dh clean --with fortran_mod debian/rules override_dh_auto_clean make[1]: Entering directory '/build/pnetcdf-1.10.0' rm -rf build-* make[1]: Leaving directory '/build/pnetcdf-1.10.0' dh_clean rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/libpnetcdf-dev.substvars debian/pnetcdf-bin.substvars debian/libpnetcdf0d.substvars debian/files rm -fr -- debian/libpnetcdf-dev/ debian/tmp/ debian/pnetcdf-bin/ debian/libpnetcdf0d/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a -name autom4te.cache -prune -exec rm -rf {} + \) \) debian/rules build dh build --with fortran_mod dh_update_autotools_config install -d debian/.debhelper/bucket/files cp -an --reflink=auto scripts/config.guess debian/.debhelper/bucket/files/913077d5113ce99ff97f6b22e232549f2c93241fcd174b00b84af704f2d364fa.tmp mv debian/.debhelper/bucket/files/913077d5113ce99ff97f6b22e232549f2c93241fcd174b00b84af704f2d364fa.tmp debian/.debhelper/bucket/files/913077d5113ce99ff97f6b22e232549f2c93241fcd174b00b84af704f2d364fa cp -f /usr/share/misc/config.guess ./scripts/config.guess cp -an --reflink=auto scripts/config.sub debian/.debhelper/bucket/files/52d7418817df4a0bd139446cf014f9dfd5bb3406a95c3109ca6fd578068be472.tmp mv debian/.debhelper/bucket/files/52d7418817df4a0bd139446cf014f9dfd5bb3406a95c3109ca6fd578068be472.tmp debian/.debhelper/bucket/files/52d7418817df4a0bd139446cf014f9dfd5bb3406a95c3109ca6fd578068be472 cp -f /usr/share/misc/config.sub ./scripts/config.sub dh_autoreconf find ! -ipath "./debian/*" -a ! \( -path '*/.git/*' -o -path '*/.hg/*' -o -path '*/.bzr/*' -o -path '*/.svn/*' -o -path '*/CVS/*' \) -a -type f -exec md5sum {} + -o -type l -printf "symlink %p " > debian/autoreconf.before grep -q ^XDT_ configure.ac autoreconf -f -i libtoolize: putting auxiliary files in AC_CONFIG_AUX_DIR, './scripts'. libtoolize: copying file './scripts/ltmain.sh' libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'. libtoolize: copying file 'm4/libtool.m4' libtoolize: copying file 'm4/ltoptions.m4' libtoolize: copying file 'm4/ltsugar.m4' libtoolize: copying file 'm4/ltversion.m4' libtoolize: copying file 'm4/lt~obsolete.m4' configure.ac:267: installing './scripts/compile' configure.ac:33: installing './scripts/install-sh' configure.ac:33: installing './scripts/missing' benchmarks/C/Makefile.am: installing './scripts/depcomp' parallel-tests: installing './scripts/test-driver' test/testcases/Makefile.am:78: warning: variable 'nodist_erange_fill_SOURCES' is defined but no program or test/testcases/Makefile.am:78: library has 'erange_fill' as canonical name (possible typo) find ! -ipath "./debian/*" -a ! \( -path '*/.git/*' -o -path '*/.hg/*' -o -path '*/.bzr/*' -o -path '*/.svn/*' -o -path '*/CVS/*' \) -a -type f -exec md5sum {} + -o -type l -printf "symlink %p " > debian/autoreconf.after debian/rules override_dh_auto_configure make[1]: Entering directory '/build/pnetcdf-1.10.0' dh_auto_configure --builddirectory=build-static install -d build-static cd build-static && ../configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-silent-rules --libdir=\${prefix}/lib/x86_64-linux-gnu --libexecdir=\${prefix}/lib/x86_64-linux-gnu --disable-maintainer-mode --disable-dependency-tracking checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether make supports nested variables... (cached) yes checking whether to enable maintainer-specific portions of Makefiles... no checking for mpicc... /usr/bin/mpicc checking for gcc... /usr/bin/mpicc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether /usr/bin/mpicc accepts -g... yes checking for /usr/bin/mpicc option to accept ISO C89... none needed checking whether /usr/bin/mpicc understands -c and -o together... yes checking whether make supports the include directive... yes (GNU style) checking dependency style of /usr/bin/mpicc... none checking for special C compiler options needed for large files... no checking for _FILE_OFFSET_BITS value needed for large files... no checking for MPI_Comm_rank... yes checking for MPI_File_open... yes checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking how to print strings... printf checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by /usr/bin/mpicc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ar... ar checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from /usr/bin/mpicc object... ok checking for sysroot... no checking for a working dd... /bin/dd checking how to truncate binary pipes... /bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... no checking how to run the C preprocessor... /usr/bin/mpicc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if /usr/bin/mpicc supports -fno-rtti -fno-exceptions... no checking for /usr/bin/mpicc option to produce PIC... -fPIC -DPIC checking if /usr/bin/mpicc PIC flag -fPIC -DPIC works... yes checking if /usr/bin/mpicc static flag -static works... no checking if /usr/bin/mpicc supports -c -o file.o... rm: cannot remove 'conftest*': No such file or directory yes checking if /usr/bin/mpicc supports -c -o file.o... (cached) yes checking whether the /usr/bin/mpicc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... no checking whether to build static libraries... yes checking for mpicxx... /usr/bin/mpicxx checking whether we are using the GNU C++ compiler... yes checking whether /usr/bin/mpicxx accepts -g... yes checking dependency style of /usr/bin/mpicxx... none checking how to run the C++ preprocessor... /usr/bin/mpicxx -E checking for ld used by /usr/bin/mpicxx... /usr/bin/ld -m elf_x86_64 checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes checking whether the /usr/bin/mpicxx linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking for /usr/bin/mpicxx option to produce PIC... -fPIC -DPIC checking if /usr/bin/mpicxx PIC flag -fPIC -DPIC works... yes checking if /usr/bin/mpicxx static flag -static works... no checking if /usr/bin/mpicxx supports -c -o file.o... rm: cannot remove 'conftest*': No such file or directory yes checking if /usr/bin/mpicxx supports -c -o file.o... (cached) yes checking whether the /usr/bin/mpicxx linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for MPI_File_close... yes checking if MPI C++ compiler redefines SEEK_SET ... no checking mpif77... checking for mpif77... /usr/bin/mpif77 checking mpif90... checking for mpif90... /usr/bin/mpif90 checking whether we are using the GNU Fortran 77 compiler... yes checking whether /usr/bin/mpif77 accepts -g... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... no checking whether to build static libraries... yes checking for /usr/bin/mpif77 option to produce PIC... -fPIC checking if /usr/bin/mpif77 PIC flag -fPIC works... yes checking if /usr/bin/mpif77 static flag -static works... no checking if /usr/bin/mpif77 supports -c -o file.o... rm: cannot remove 'conftest*': No such file or directory yes checking if /usr/bin/mpif77 supports -c -o file.o... (cached) yes checking whether the /usr/bin/mpif77 linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking how to get verbose linking output from /usr/bin/mpif77... -v checking for Fortran 77 libraries of /usr/bin/mpif77... -L/usr/lib/x86_64-linux-gnu/openmpi/lib -L/usr/lib/gcc/x86_64-linux-gnu/8 -L/usr/lib/gcc/x86_64-linux-gnu/8/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/8/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/8/../../.. -lgfortran -lm -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi -lquadmath -lpthread checking if /usr/bin/mpif77 is a valid MPI compiler... yes checking whether we are using the GNU Fortran compiler... yes checking whether /usr/bin/mpif90 accepts -g... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... no checking whether to build static libraries... yes checking for /usr/bin/mpif90 option to produce PIC... -fPIC checking if /usr/bin/mpif90 PIC flag -fPIC works... yes checking if /usr/bin/mpif90 static flag -static works... no checking if /usr/bin/mpif90 supports -c -o file.o... rm: cannot remove 'conftest*': No such file or directory yes checking if /usr/bin/mpif90 supports -c -o file.o... (cached) yes checking whether the /usr/bin/mpif90 linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking how to get verbose linking output from /usr/bin/mpif90... -v checking for Fortran libraries of /usr/bin/mpif90... -L/usr/lib/x86_64-linux-gnu/openmpi/lib -L/usr/lib/gcc/x86_64-linux-gnu/8 -L/usr/lib/gcc/x86_64-linux-gnu/8/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/8/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/8/../../.. -lgfortran -lm -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi -lquadmath -lpthread checking if mpi.mod is available... yes checking if /usr/bin/mpif90 is a valid MPI compiler... yes checking for Fortran flag needed to accept free-form source... -ffree-form checking for Fortran flag to compile preprocessed .F files... none checking for Fortran flag to compile preprocessed .F90 files... none checking for Fortran flag to compile preprocessed .F files... (cached) none checking how to define symbols for preprocessed Fortran... -D checking for Fortran flag to compile .f files... none checking for Fortran flag to compile .F files... none checking for Fortran flag to compile .f90 files... none checking for Fortran flag to compile .F90 files... none checking for Fortran flag needed to accept fixed-form source... -ffixed-form checking for dummy main to link with Fortran libraries... none checking for Fortran name-mangling scheme... lower case, underscore, no extra underscore checking for C-equivalent to Fortran routine "SUB_A"... sub_a_ checking if Fortran compiler is NAG... no checking Fortran compiler treating constant modifier... 8 checking Fortran 90 module extension... mod checking Fortran 90 module inclusion flag... -I checking Fortran 90 module extension... (cached) mod checking if Fortran 90 compiler capitalizes .mod filenames... no checking for egrep... (cached) /bin/grep -E checking for a sed that does not truncate output... (cached) /bin/sed checking for sed handling option -i ... /bin/sed -i'' checking for grep that handles long lines and -e... (cached) /bin/grep checking for m4... m4 checking m4 flags... "none" checking for stdbool.h that conforms to C99... yes checking for _Bool... yes checking for inline... inline checking for IEEE floating point format... yes checking for strerror... yes checking for access... yes checking for unlink... yes checking search.h usability... yes checking search.h presence... yes checking for search.h... yes checking for tsearch... yes checking for tdelete... yes checking for MPI_Offset... yes checking size of MPI_Offset... 8 checking size of MPI_Aint... 8 checking for MPI_Get_address... yes checking for MPI_Type_create_subarray... yes checking for MPI_Type_create_hvector... yes checking for MPI_Type_create_hindexed... yes checking for MPI_Type_create_struct... yes checking for MPI_Type_create_resized... yes checking for MPI_Type_get_extent... yes checking whether MPI_COMBINER_DUP is declared... yes checking whether MPI_COMBINER_HVECTOR_INTEGER is declared... yes checking whether MPI_COMBINER_HINDEXED_INTEGER is declared... yes checking whether MPI_COMBINER_SUBARRAY is declared... yes checking whether MPI_COMBINER_DARRAY is declared... yes checking whether MPI_COMBINER_RESIZED is declared... yes checking whether MPI_COMBINER_STRUCT_INTEGER is declared... yes checking whether MPI_COMBINER_INDEXED_BLOCK is declared... yes checking whether MPI_COMBINER_F90_REAL is declared... yes checking whether MPI_COMBINER_F90_INTEGER is declared... yes checking whether MPI_COMBINER_F90_COMPLEX is declared... yes checking whether MPI_ERR_FILE_EXISTS is declared... yes checking whether MPI_ERR_NO_SUCH_FILE is declared... yes checking whether MPI_ERR_AMODE is declared... yes checking whether MPI_ERR_NOT_SAME is declared... yes checking whether MPI_ERR_BAD_FILE is declared... yes checking whether MPI_ERR_READ_ONLY is declared... yes checking whether MPI_ERR_ACCESS is declared... yes checking whether MPI_ERR_NO_SPACE is declared... yes checking whether MPI_ERR_QUOTA is declared... yes checking if MPI datatype MPI_OFFSET is defined ... yes checking if MPI datatype MPI_INTEGER8 is defined ... yes checking if MPI datatype MPI_CHARACTER is defined ... yes checking if MPI datatype MPI_REAL is defined ... yes checking if MPI datatype MPI_INTEGER is defined ... yes checking if MPI datatype MPI_DOUBLE_PRECISION is defined ... yes checking if MPI datatype MPI_INTEGER1 is defined ... yes checking if MPI datatype MPI_INTEGER2 is defined ... yes checking if MPI datatype MPI_INTEGER4 is defined ... yes checking if MPI datatype MPI_REAL2 is defined ... no checking if MPI datatype MPI_REAL4 is defined ... yes checking if MPI datatype MPI_REAL8 is defined ... yes checking whether char is unsigned... no checking whether byte ordering is bigendian... no checking for size_t... yes checking for off_t... yes checking for ssize_t... yes checking for ptrdiff_t... yes checking for schar... no checking for uchar... no checking for ushort... yes checking for uint... yes checking for longlong... no checking for ulonglong... no checking for int64... no checking for uint64... no checking size of size_t... 8 checking size of off_t... 8 checking size of char... 1 checking size of signed char... 1 checking size of unsigned char... 1 checking size of short... 2 checking size of unsigned short int... 2 checking size of unsigned short... 2 checking size of int... 4 checking size of unsigned int... 4 checking size of long... 8 checking size of float... 4 checking size of double... 8 checking size of long long... 8 checking size of unsigned long long... 8 checking size of ushort... 2 checking size of uint... 4 checking for /usr/bin/nm... /usr/bin/nm -B checking nm flags... checking for C-equivalent to Fortran routine "SUB"... sub_ checking for Fortran "integer*1"... yes checking for Fortran "integer*2"... yes checking for Fortran "integer*8"... yes checking if Fortran "integer*1" is ... "signed char" in C checking if Fortran "integer*2" is ... "short" in C checking if Fortran "integer*8" is ... "int" in C checking if Fortran "integer" is ... "int" in C checking if Fortran "real" is ... "float" in C checking if Fortran "doubleprecision" is ... "double" in C checking for Fortran-equivalent to netCDF "byte"... byte checking for Fortran-equivalent to netCDF "short"... integer*2 checking for Fortran NFMPI_OFFSET "integer*8"... yes checking for Fortran 77 GNU intrinsic INT... yes checking for Fortran 77 intrinsic INT1... no checking for Fortran 77 intrinsic INT2... yes checking for Fortran 77 intrinsic INT8... yes checking for gcov... gcov checking if C++ macro __func__ or __FUNCTION__ is defined... yes checking for latex... /usr/bin/latex checking for dvipdf... /usr/bin/dvipdf checking for mpiexec... /usr/bin/mpiexec checking for gcc... /usr/bin/gcc date: invalid date '1545387225' checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating src/Makefile config.status: creating src/dispatchers/Makefile config.status: creating src/libs/Makefile config.status: creating src/include/Makefile config.status: creating src/include/pnetcdf.h config.status: creating src/drivers/Makefile config.status: creating src/drivers/common/Makefile config.status: creating src/drivers/include/Makefile config.status: creating src/drivers/ncmpio/Makefile config.status: creating src/drivers/ncbbio/Makefile config.status: creating src/drivers/ncfoo/Makefile config.status: creating src/binding/Makefile config.status: creating src/binding/cxx/Makefile config.status: creating src/binding/f77/Makefile config.status: creating src/binding/f77/pnetcdf.inc config.status: creating src/binding/f90/Makefile config.status: creating src/binding/f90/pnetcdf.f90 config.status: creating src/binding/f90/api.fh config.status: creating src/binding/f90/nfmpi_constants.fh config.status: creating src/utils/Makefile config.status: creating src/utils/ncoffsets/Makefile config.status: creating src/utils/pnetcdf_version/Makefile config.status: creating src/utils/ncvalidator/Makefile config.status: creating src/utils/ncmpidiff/Makefile config.status: creating src/utils/ncmpidump/Makefile config.status: creating src/utils/ncmpigen/Makefile config.status: creating src/utils/ncmpilogdump/Makefile config.status: creating src/utils/pnetcdf-config config.status: creating src/packaging/Makefile config.status: creating src/packaging/pnetcdf.pc config.status: creating examples/Makefile config.status: creating examples/C/Makefile config.status: creating examples/tutorial/Makefile config.status: creating examples/CXX/Makefile config.status: creating examples/F77/Makefile config.status: creating examples/F90/Makefile config.status: creating examples/burst_buffer/Makefile config.status: creating benchmarks/Makefile config.status: creating benchmarks/C/Makefile config.status: creating benchmarks/FLASH-IO/Makefile config.status: creating doc/Makefile config.status: creating doc/pnetcdf-api/Makefile config.status: creating man/Makefile config.status: creating test/Makefile config.status: creating test/common/Makefile config.status: creating test/C/Makefile config.status: creating test/fandc/Makefile config.status: creating test/nc_test/Makefile config.status: creating test/cdf_format/Makefile config.status: creating test/header/Makefile config.status: creating test/testcases/Makefile config.status: creating test/nonblocking/Makefile config.status: creating test/largefile/Makefile config.status: creating test/CXX/Makefile config.status: creating test/subfile/Makefile config.status: creating test/nf_test/Makefile config.status: creating test/nf_test/tests.inc config.status: creating test/nf90_test/Makefile config.status: creating test/nf90_test/tests.inc config.status: creating test/F90/Makefile config.status: creating test/burst_buffer/Makefile config.status: creating src/include/config.h config.status: executing depfiles commands config.status: executing libtool commands rm: cannot remove 'libtoolT': No such file or directory ------------------------------------------------------------------------------ parallel-netcdf Version 1.10.0 Features: Build static libraries - yes Build shared libraries - no Build Fortran APIs - yes Build C++ APIs - yes Compilers: MPICC = /usr/bin/mpicc MPICXX = /usr/bin/mpicxx MPIF77 = /usr/bin/mpif77 MPIF90 = /usr/bin/mpif90 CFLAGS = -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security CPPFLAGS = -Wdate-time -D_FORTIFY_SOURCE=2 CXXFLAGS = -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security FFLAGS = -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong FCFLAGS = -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong LDFLAGS = -Wl,-z,relro -Wl,--no-as-needed -lgfortran -Wl,--as-needed Now run 'make' to build the library and utility tools. Then run 'make []' for testing and installation, where the optional can be: tests - build all test programs (build only, no run) check - run sequential test programs ptest - run parallel test programs on 4 MPI processes ptests - run parallel test programs on 3,4,6,8 MPI processes install - install PnetCDF library in /usr ------------------------------------------------------------------------------ OMPI_CFLAGS=" -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security" OMPI_CXXFLAGS="-g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security" \ OMPI_FCFLAGS="-g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong" OMPI_FFLAGS="-g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong" \ OMPI_LDFLAGS="-Wl,-z,relro -Wl,--no-as-needed -lgfortran -Wl,--as-needed" \ OMPI_FC=gfortran-8 FC=gfortran-8 dh_auto_configure --builddirectory=build-shared -- \ CFLAGS=" -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g" CXXFLAGS="-g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g" \ FCFLAGS="-g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -fPIC -g" FFLAGS="-g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -fPIC -g" \ LDFLAGS="-Wl,-z,relro -Wl,--no-as-needed -lgfortran -Wl,--as-needed -g" \ OMPI_CFLAGS=" -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g" OMPI_CXXFLAGS="-g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g" \ OMPI_FCFLAGS="-g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -fPIC -g" OMPI_FFLAGS="-g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -fPIC -g" \ OMPI_LDFLAGS="-Wl,-z,relro -Wl,--no-as-needed -lgfortran -Wl,--as-needed -g" \ OMPI_FC=gfortran-8 FC=gfortran-8 install -d build-shared cd build-shared && ../configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-silent-rules --libdir=\${prefix}/lib/x86_64-linux-gnu --libexecdir=\${prefix}/lib/x86_64-linux-gnu --disable-maintainer-mode --disable-dependency-tracking "CFLAGS= -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g" "CXXFLAGS=-g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g" "FCFLAGS=-g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -fPIC -g" "FFLAGS=-g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -fPIC -g" "LDFLAGS=-Wl,-z,relro -Wl,--no-as-needed -lgfortran -Wl,--as-needed -g" "OMPI_CFLAGS= -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g" "OMPI_CXXFLAGS=-g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g" "OMPI_FCFLAGS=-g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -fPIC -g" "OMPI_FFLAGS=-g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -fPIC -g" "OMPI_LDFLAGS=-Wl,-z,relro -Wl,--no-as-needed -lgfortran -Wl,--as-needed -g" OMPI_FC=gfortran-8 FC=gfortran-8 checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether make supports nested variables... (cached) yes checking whether to enable maintainer-specific portions of Makefiles... no checking for mpicc... /usr/bin/mpicc checking for gcc... /usr/bin/mpicc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether /usr/bin/mpicc accepts -g... yes checking for /usr/bin/mpicc option to accept ISO C89... none needed checking whether /usr/bin/mpicc understands -c and -o together... yes checking whether make supports the include directive... yes (GNU style) checking dependency style of /usr/bin/mpicc... none checking for special C compiler options needed for large files... no checking for _FILE_OFFSET_BITS value needed for large files... no checking for MPI_Comm_rank... yes checking for MPI_File_open... yes checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking how to print strings... printf checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by /usr/bin/mpicc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ar... ar checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from /usr/bin/mpicc object... ok checking for sysroot... no checking for a working dd... /bin/dd checking how to truncate binary pipes... /bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... no checking how to run the C preprocessor... /usr/bin/mpicc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if /usr/bin/mpicc supports -fno-rtti -fno-exceptions... no checking for /usr/bin/mpicc option to produce PIC... -fPIC -DPIC checking if /usr/bin/mpicc PIC flag -fPIC -DPIC works... yes checking if /usr/bin/mpicc static flag -static works... no checking if /usr/bin/mpicc supports -c -o file.o... rm: cannot remove 'conftest*': No such file or directory yes checking if /usr/bin/mpicc supports -c -o file.o... (cached) yes checking whether the /usr/bin/mpicc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... no checking whether to build static libraries... yes checking for mpicxx... /usr/bin/mpicxx checking whether we are using the GNU C++ compiler... yes checking whether /usr/bin/mpicxx accepts -g... yes checking dependency style of /usr/bin/mpicxx... none checking how to run the C++ preprocessor... /usr/bin/mpicxx -E checking for ld used by /usr/bin/mpicxx... /usr/bin/ld -m elf_x86_64 checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes checking whether the /usr/bin/mpicxx linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking for /usr/bin/mpicxx option to produce PIC... -fPIC -DPIC checking if /usr/bin/mpicxx PIC flag -fPIC -DPIC works... yes checking if /usr/bin/mpicxx static flag -static works... no checking if /usr/bin/mpicxx supports -c -o file.o... rm: cannot remove 'conftest*': No such file or directory yes checking if /usr/bin/mpicxx supports -c -o file.o... (cached) yes checking whether the /usr/bin/mpicxx linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking for MPI_File_close... yes checking if MPI C++ compiler redefines SEEK_SET ... no checking mpif77... checking for mpif77... /usr/bin/mpif77 checking mpif90... checking for mpif90... /usr/bin/mpif90 checking whether we are using the GNU Fortran 77 compiler... yes checking whether /usr/bin/mpif77 accepts -g... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... no checking whether to build static libraries... yes checking for /usr/bin/mpif77 option to produce PIC... -fPIC checking if /usr/bin/mpif77 PIC flag -fPIC works... yes checking if /usr/bin/mpif77 static flag -static works... no checking if /usr/bin/mpif77 supports -c -o file.o... rm: cannot remove 'conftest*': No such file or directory yes checking if /usr/bin/mpif77 supports -c -o file.o... (cached) yes checking whether the /usr/bin/mpif77 linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking how to get verbose linking output from /usr/bin/mpif77... -v checking for Fortran 77 libraries of /usr/bin/mpif77... -L/usr/lib/gcc/x86_64-linux-gnu/8 -L/usr/lib/gcc/x86_64-linux-gnu/8/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/8/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/8/../../.. -lgfortran -lm -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi -lquadmath checking if /usr/bin/mpif77 is a valid MPI compiler... yes checking whether we are using the GNU Fortran compiler... yes checking whether /usr/bin/mpif90 accepts -g... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... no checking whether to build static libraries... yes checking for /usr/bin/mpif90 option to produce PIC... -fPIC checking if /usr/bin/mpif90 PIC flag -fPIC works... yes checking if /usr/bin/mpif90 static flag -static works... no checking if /usr/bin/mpif90 supports -c -o file.o... rm: cannot remove 'conftest*': No such file or directory yes checking if /usr/bin/mpif90 supports -c -o file.o... (cached) yes checking whether the /usr/bin/mpif90 linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking how to get verbose linking output from /usr/bin/mpif90... -v checking for Fortran libraries of /usr/bin/mpif90... -L/usr/lib/gcc/x86_64-linux-gnu/8 -L/usr/lib/gcc/x86_64-linux-gnu/8/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/8/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/8/../../.. -lgfortran -lm -lmpi_usempif08 -lmpi_usempi_ignore_tkr -lmpi_mpifh -lmpi -lquadmath checking if mpi.mod is available... no checking if /usr/bin/mpif90 is a valid MPI compiler... yes checking for Fortran flag needed to accept free-form source... -ffree-form checking for Fortran flag to compile preprocessed .F files... none checking for Fortran flag to compile preprocessed .F90 files... none checking for Fortran flag to compile preprocessed .F files... (cached) none checking how to define symbols for preprocessed Fortran... -D checking for Fortran flag to compile .f files... none checking for Fortran flag to compile .F files... none checking for Fortran flag to compile .f90 files... none checking for Fortran flag to compile .F90 files... none checking for Fortran flag needed to accept fixed-form source... -ffixed-form checking for dummy main to link with Fortran libraries... none checking for Fortran name-mangling scheme... lower case, underscore, no extra underscore checking for C-equivalent to Fortran routine "SUB_A"... sub_a_ checking if Fortran compiler is NAG... no checking Fortran compiler treating constant modifier... 8 checking Fortran 90 module extension... mod checking Fortran 90 module inclusion flag... -I checking Fortran 90 module extension... (cached) mod checking if Fortran 90 compiler capitalizes .mod filenames... no checking for egrep... (cached) /bin/grep -E checking for a sed that does not truncate output... (cached) /bin/sed checking for sed handling option -i ... /bin/sed -i'' checking for grep that handles long lines and -e... (cached) /bin/grep checking for m4... m4 checking m4 flags... "none" checking for stdbool.h that conforms to C99... yes checking for _Bool... yes checking for inline... inline checking for IEEE floating point format... yes checking for strerror... yes checking for access... yes checking for unlink... yes checking search.h usability... yes checking search.h presence... yes checking for search.h... yes checking for tsearch... yes checking for tdelete... yes checking for MPI_Offset... yes checking size of MPI_Offset... 8 checking size of MPI_Aint... 8 checking for MPI_Get_address... yes checking for MPI_Type_create_subarray... yes checking for MPI_Type_create_hvector... yes checking for MPI_Type_create_hindexed... yes checking for MPI_Type_create_struct... yes checking for MPI_Type_create_resized... yes checking for MPI_Type_get_extent... yes checking whether MPI_COMBINER_DUP is declared... yes checking whether MPI_COMBINER_HVECTOR_INTEGER is declared... yes checking whether MPI_COMBINER_HINDEXED_INTEGER is declared... yes checking whether MPI_COMBINER_SUBARRAY is declared... yes checking whether MPI_COMBINER_DARRAY is declared... yes checking whether MPI_COMBINER_RESIZED is declared... yes checking whether MPI_COMBINER_STRUCT_INTEGER is declared... yes checking whether MPI_COMBINER_INDEXED_BLOCK is declared... yes checking whether MPI_COMBINER_F90_REAL is declared... yes checking whether MPI_COMBINER_F90_INTEGER is declared... yes checking whether MPI_COMBINER_F90_COMPLEX is declared... yes checking whether MPI_ERR_FILE_EXISTS is declared... yes checking whether MPI_ERR_NO_SUCH_FILE is declared... yes checking whether MPI_ERR_AMODE is declared... yes checking whether MPI_ERR_NOT_SAME is declared... yes checking whether MPI_ERR_BAD_FILE is declared... yes checking whether MPI_ERR_READ_ONLY is declared... yes checking whether MPI_ERR_ACCESS is declared... yes checking whether MPI_ERR_NO_SPACE is declared... yes checking whether MPI_ERR_QUOTA is declared... yes checking if MPI datatype MPI_OFFSET is defined ... yes checking if MPI datatype MPI_INTEGER8 is defined ... yes checking if MPI datatype MPI_CHARACTER is defined ... yes checking if MPI datatype MPI_REAL is defined ... yes checking if MPI datatype MPI_INTEGER is defined ... yes checking if MPI datatype MPI_DOUBLE_PRECISION is defined ... yes checking if MPI datatype MPI_INTEGER1 is defined ... yes checking if MPI datatype MPI_INTEGER2 is defined ... yes checking if MPI datatype MPI_INTEGER4 is defined ... yes checking if MPI datatype MPI_REAL2 is defined ... no checking if MPI datatype MPI_REAL4 is defined ... yes checking if MPI datatype MPI_REAL8 is defined ... yes checking whether char is unsigned... no checking whether byte ordering is bigendian... no checking for size_t... yes checking for off_t... yes checking for ssize_t... yes checking for ptrdiff_t... yes checking for schar... no checking for uchar... no checking for ushort... yes checking for uint... yes checking for longlong... no checking for ulonglong... no checking for int64... no checking for uint64... no checking size of size_t... 8 checking size of off_t... 8 checking size of char... 1 checking size of signed char... 1 checking size of unsigned char... 1 checking size of short... 2 checking size of unsigned short int... 2 checking size of unsigned short... 2 checking size of int... 4 checking size of unsigned int... 4 checking size of long... 8 checking size of float... 4 checking size of double... 8 checking size of long long... 8 checking size of unsigned long long... 8 checking size of ushort... 2 checking size of uint... 4 checking for /usr/bin/nm... /usr/bin/nm -B checking nm flags... checking for C-equivalent to Fortran routine "SUB"... sub_ checking for Fortran "integer*1"... yes checking for Fortran "integer*2"... yes checking for Fortran "integer*8"... yes checking if Fortran "integer*1" is ... "signed char" in C checking if Fortran "integer*2" is ... "short" in C checking if Fortran "integer*8" is ... "int" in C checking if Fortran "integer" is ... "int" in C checking if Fortran "real" is ... "float" in C checking if Fortran "doubleprecision" is ... "double" in C checking for Fortran-equivalent to netCDF "byte"... byte checking for Fortran-equivalent to netCDF "short"... integer*2 checking for Fortran NFMPI_OFFSET "integer*8"... yes checking for Fortran 77 GNU intrinsic INT... yes checking for Fortran 77 intrinsic INT1... no checking for Fortran 77 intrinsic INT2... yes checking for Fortran 77 intrinsic INT8... yes checking for gcov... gcov checking if C++ macro __func__ or __FUNCTION__ is defined... yes checking for latex... /usr/bin/latex checking for dvipdf... /usr/bin/dvipdf checking for mpiexec... /usr/bin/mpiexec checking for gcc... /usr/bin/gcc date: invalid date '1545387225' checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating src/Makefile config.status: creating src/dispatchers/Makefile config.status: creating src/libs/Makefile config.status: creating src/include/Makefile config.status: creating src/include/pnetcdf.h config.status: creating src/drivers/Makefile config.status: creating src/drivers/common/Makefile config.status: creating src/drivers/include/Makefile config.status: creating src/drivers/ncmpio/Makefile config.status: creating src/drivers/ncbbio/Makefile config.status: creating src/drivers/ncfoo/Makefile config.status: creating src/binding/Makefile config.status: creating src/binding/cxx/Makefile config.status: creating src/binding/f77/Makefile config.status: creating src/binding/f77/pnetcdf.inc config.status: creating src/binding/f90/Makefile config.status: creating src/binding/f90/pnetcdf.f90 config.status: creating src/binding/f90/api.fh config.status: creating src/binding/f90/nfmpi_constants.fh config.status: creating src/utils/Makefile config.status: creating src/utils/ncoffsets/Makefile config.status: creating src/utils/pnetcdf_version/Makefile config.status: creating src/utils/ncvalidator/Makefile config.status: creating src/utils/ncmpidiff/Makefile config.status: creating src/utils/ncmpidump/Makefile config.status: creating src/utils/ncmpigen/Makefile config.status: creating src/utils/ncmpilogdump/Makefile config.status: creating src/utils/pnetcdf-config config.status: creating src/packaging/Makefile config.status: creating src/packaging/pnetcdf.pc config.status: creating examples/Makefile config.status: creating examples/C/Makefile config.status: creating examples/tutorial/Makefile config.status: creating examples/CXX/Makefile config.status: creating examples/F77/Makefile config.status: creating examples/F90/Makefile config.status: creating examples/burst_buffer/Makefile config.status: creating benchmarks/Makefile config.status: creating benchmarks/C/Makefile config.status: creating benchmarks/FLASH-IO/Makefile config.status: creating doc/Makefile config.status: creating doc/pnetcdf-api/Makefile config.status: creating man/Makefile config.status: creating test/Makefile config.status: creating test/common/Makefile config.status: creating test/C/Makefile config.status: creating test/fandc/Makefile config.status: creating test/nc_test/Makefile config.status: creating test/cdf_format/Makefile config.status: creating test/header/Makefile config.status: creating test/testcases/Makefile config.status: creating test/nonblocking/Makefile config.status: creating test/largefile/Makefile config.status: creating test/CXX/Makefile config.status: creating test/subfile/Makefile config.status: creating test/nf_test/Makefile config.status: creating test/nf_test/tests.inc config.status: creating test/nf90_test/Makefile config.status: creating test/nf90_test/tests.inc config.status: creating test/F90/Makefile config.status: creating test/burst_buffer/Makefile config.status: creating src/include/config.h config.status: executing depfiles commands config.status: executing libtool commands rm: cannot remove 'libtoolT': No such file or directory ------------------------------------------------------------------------------ parallel-netcdf Version 1.10.0 Features: Build static libraries - yes Build shared libraries - no Build Fortran APIs - yes Build C++ APIs - yes Compilers: MPICC = /usr/bin/mpicc MPICXX = /usr/bin/mpicxx MPIF77 = /usr/bin/mpif77 MPIF90 = /usr/bin/mpif90 CFLAGS = -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g CPPFLAGS = -Wdate-time -D_FORTIFY_SOURCE=2 CXXFLAGS = -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g FFLAGS = -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -fPIC -g FCFLAGS = -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -fPIC -g LDFLAGS = -Wl,-z,relro -Wl,--no-as-needed -lgfortran -Wl,--as-needed -g Now run 'make' to build the library and utility tools. Then run 'make []' for testing and installation, where the optional can be: tests - build all test programs (build only, no run) check - run sequential test programs ptest - run parallel test programs on 4 MPI processes ptests - run parallel test programs on 3,4,6,8 MPI processes install - install PnetCDF library in /usr ------------------------------------------------------------------------------ make[1]: Leaving directory '/build/pnetcdf-1.10.0' rm -f debian/libpnetcdf-dev.debhelper.log debian/libpnetcdf0d.debhelper.log debian/pnetcdf-bin.debhelper.log debian/rules override_dh_auto_build make[1]: Entering directory '/build/pnetcdf-1.10.0' /usr/bin/make -C build-static make[2]: Entering directory '/build/pnetcdf-1.10.0/build-static' Making all in src make[3]: Entering directory '/build/pnetcdf-1.10.0/build-static/src' Making all in include make[4]: Entering directory '/build/pnetcdf-1.10.0/build-static/src/include' /usr/bin/make all-am make[5]: Entering directory '/build/pnetcdf-1.10.0/build-static/src/include' make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-static/src/include' make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-static/src/include' Making all in dispatchers make[4]: Entering directory '/build/pnetcdf-1.10.0/build-static/src/dispatchers' m4 -DPNETCDF -I../../../m4 ../../../src/dispatchers/attr_getput.m4 >attr_getput.c m4 -DPNETCDF -I../../../m4 ../../../src/dispatchers/var_getput.m4 >var_getput.c /usr/bin/make all-am make[5]: Entering directory '/build/pnetcdf-1.10.0/build-static/src/dispatchers' /bin/bash ../../libtool --tag=CC --mode=compile /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/dispatchers -I../../src/include -I../../../src/include -I../../src/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -c -o lib_version.lo ../../../src/dispatchers/lib_version.c libtool: compile: /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/dispatchers -I../../src/include -I../../../src/include -I../../src/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../../src/dispatchers/lib_version.c -o lib_version.o /bin/bash ../../libtool --tag=CC --mode=compile /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/dispatchers -I../../src/include -I../../../src/include -I../../src/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -c -o file.lo ../../../src/dispatchers/file.c libtool: compile: /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/dispatchers -I../../src/include -I../../../src/include -I../../src/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../../src/dispatchers/file.c -o file.o /bin/bash ../../libtool --tag=CC --mode=compile /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/dispatchers -I../../src/include -I../../../src/include -I../../src/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -c -o dimension.lo ../../../src/dispatchers/dimension.c libtool: compile: /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/dispatchers -I../../src/include -I../../../src/include -I../../src/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../../src/dispatchers/dimension.c -o dimension.o /bin/bash ../../libtool --tag=CC --mode=compile /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/dispatchers -I../../src/include -I../../../src/include -I../../src/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -c -o variable.lo ../../../src/dispatchers/variable.c libtool: compile: /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/dispatchers -I../../src/include -I../../../src/include -I../../src/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../../src/dispatchers/variable.c -o variable.o /bin/bash ../../libtool --tag=CC --mode=compile /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/dispatchers -I../../src/include -I../../../src/include -I../../src/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -c -o attribute.lo ../../../src/dispatchers/attribute.c libtool: compile: /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/dispatchers -I../../src/include -I../../../src/include -I../../src/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../../src/dispatchers/attribute.c -o attribute.o /bin/bash ../../libtool --tag=CC --mode=compile /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/dispatchers -I../../src/include -I../../../src/include -I../../src/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -c -o error_codes.lo ../../../src/dispatchers/error_codes.c libtool: compile: /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/dispatchers -I../../src/include -I../../../src/include -I../../src/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../../src/dispatchers/error_codes.c -o error_codes.o /bin/bash ../../libtool --tag=CC --mode=compile /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/dispatchers -I../../src/include -I../../../src/include -I../../src/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -c -o attr_getput.lo attr_getput.c libtool: compile: /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/dispatchers -I../../src/include -I../../../src/include -I../../src/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -c attr_getput.c -o attr_getput.o /bin/bash ../../libtool --tag=CC --mode=compile /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/dispatchers -I../../src/include -I../../../src/include -I../../src/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -c -o var_getput.lo var_getput.c libtool: compile: /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/dispatchers -I../../src/include -I../../../src/include -I../../src/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -c var_getput.c -o var_getput.o /bin/bash ../../libtool --tag=CC --mode=link /usr/bin/mpicc -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,--no-as-needed -lgfortran -Wl,--as-needed -o libdispatchers.la lib_version.lo file.lo dimension.lo variable.lo attribute.lo error_codes.lo attr_getput.lo var_getput.lo libtool: link: ar cru .libs/libdispatchers.a lib_version.o file.o dimension.o variable.o attribute.o error_codes.o attr_getput.o var_getput.o ar: `u' modifier ignored since `D' is the default (see `U') libtool: link: ranlib .libs/libdispatchers.a libtool: link: ( cd ".libs" && rm -f "libdispatchers.la" && ln -s "../libdispatchers.la" "libdispatchers.la" ) make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-static/src/dispatchers' make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-static/src/dispatchers' Making all in drivers make[4]: Entering directory '/build/pnetcdf-1.10.0/build-static/src/drivers' Making all in include make[5]: Entering directory '/build/pnetcdf-1.10.0/build-static/src/drivers/include' m4 -DPNETCDF -I../../../../m4 ../../../../src/drivers/include/ncx_h.m4 >ncx.h /usr/bin/make all-am make[6]: Entering directory '/build/pnetcdf-1.10.0/build-static/src/drivers/include' make[6]: Nothing to be done for 'all-am'. make[6]: Leaving directory '/build/pnetcdf-1.10.0/build-static/src/drivers/include' make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-static/src/drivers/include' Making all in common make[5]: Entering directory '/build/pnetcdf-1.10.0/build-static/src/drivers/common' m4 -DPNETCDF -I../../../../m4 -DERANGE_FILL ../../../../src/drivers/common/ncx.m4 >ncx.c m4 -DPNETCDF -I../../../../m4 -DERANGE_FILL ../../../../src/drivers/common/convert_swap.m4 >convert_swap.c /usr/bin/make all-am make[6]: Entering directory '/build/pnetcdf-1.10.0/build-static/src/drivers/common' /bin/bash ../../../libtool --tag=CC --mode=compile /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/drivers/common -I../../../src/include -I../../../../src/include -I../../../../src/drivers/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -c -o utf8proc.lo ../../../../src/drivers/common/utf8proc.c libtool: compile: /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/drivers/common -I../../../src/include -I../../../../src/include -I../../../../src/drivers/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../../../src/drivers/common/utf8proc.c -o utf8proc.o /bin/bash ../../../libtool --tag=CC --mode=compile /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/drivers/common -I../../../src/include -I../../../../src/include -I../../../../src/drivers/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -c -o mem_alloc.lo ../../../../src/drivers/common/mem_alloc.c libtool: compile: /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/drivers/common -I../../../src/include -I../../../../src/include -I../../../../src/drivers/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../../../src/drivers/common/mem_alloc.c -o mem_alloc.o /bin/bash ../../../libtool --tag=CC --mode=compile /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/drivers/common -I../../../src/include -I../../../../src/include -I../../../../src/drivers/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -c -o dtype_decode.lo ../../../../src/drivers/common/dtype_decode.c libtool: compile: /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/drivers/common -I../../../src/include -I../../../../src/include -I../../../../src/drivers/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../../../src/drivers/common/dtype_decode.c -o dtype_decode.o /bin/bash ../../../libtool --tag=CC --mode=compile /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/drivers/common -I../../../src/include -I../../../../src/include -I../../../../src/drivers/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -c -o create_imaptype.lo ../../../../src/drivers/common/create_imaptype.c libtool: compile: /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/drivers/common -I../../../src/include -I../../../../src/include -I../../../../src/drivers/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../../../src/drivers/common/create_imaptype.c -o create_imaptype.o /bin/bash ../../../libtool --tag=CC --mode=compile /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/drivers/common -I../../../src/include -I../../../../src/include -I../../../../src/drivers/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -c -o error_mpi2nc.lo ../../../../src/drivers/common/error_mpi2nc.c libtool: compile: /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/drivers/common -I../../../src/include -I../../../../src/include -I../../../../src/drivers/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../../../src/drivers/common/error_mpi2nc.c -o error_mpi2nc.o /bin/bash ../../../libtool --tag=CC --mode=compile /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/drivers/common -I../../../src/include -I../../../../src/include -I../../../../src/drivers/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -c -o check_name.lo ../../../../src/drivers/common/check_name.c libtool: compile: /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/drivers/common -I../../../src/include -I../../../../src/include -I../../../../src/drivers/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../../../src/drivers/common/check_name.c -o check_name.o /bin/bash ../../../libtool --tag=CC --mode=compile /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/drivers/common -I../../../src/include -I../../../../src/include -I../../../../src/drivers/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat 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-I../../../../src/drivers/common -I../../../src/include -I../../../../src/include -I../../../../src/drivers/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../../../src/drivers/common/utils.c -o utils.o /bin/bash ../../../libtool --tag=CC --mode=compile /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/drivers/common -I../../../src/include -I../../../../src/include -I../../../../src/drivers/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -c -o error_posix2nc.lo ../../../../src/drivers/common/error_posix2nc.c libtool: compile: /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/drivers/common -I../../../src/include -I../../../../src/include -I../../../../src/drivers/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../../../src/drivers/common/error_posix2nc.c -o error_posix2nc.o /bin/bash ../../../libtool --tag=CC --mode=compile /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/drivers/common -I../../../src/include -I../../../../src/include -I../../../../src/drivers/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -c -o hash_map.lo ../../../../src/drivers/common/hash_map.c libtool: compile: /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/drivers/common -I../../../src/include -I../../../../src/include -I../../../../src/drivers/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -c 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-I../../../../src/drivers/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -c -o convert_swap.lo convert_swap.c libtool: compile: /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/drivers/common -I../../../src/include -I../../../../src/include -I../../../../src/drivers/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -c convert_swap.c -o convert_swap.o /bin/bash ../../../libtool --tag=CC --mode=link /usr/bin/mpicc -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,--no-as-needed -lgfortran -Wl,--as-needed -o libcommon.la utf8proc.lo mem_alloc.lo dtype_decode.lo create_imaptype.lo error_mpi2nc.lo check_name.lo pack_unpack.lo utils.lo error_posix2nc.lo hash_map.lo ncx.lo convert_swap.lo libtool: link: ar cru .libs/libcommon.a utf8proc.o mem_alloc.o dtype_decode.o create_imaptype.o error_mpi2nc.o check_name.o pack_unpack.o utils.o error_posix2nc.o hash_map.o ncx.o convert_swap.o ar: `u' modifier ignored since `D' is the default (see `U') libtool: link: ranlib .libs/libcommon.a libtool: link: ( cd ".libs" && rm -f "libcommon.la" && ln -s "../libcommon.la" "libcommon.la" ) make[6]: Leaving directory '/build/pnetcdf-1.10.0/build-static/src/drivers/common' make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-static/src/drivers/common' Making all in ncmpio make[5]: Entering directory '/build/pnetcdf-1.10.0/build-static/src/drivers/ncmpio' m4 -DPNETCDF -I../../../../m4 -DERANGE_FILL ../../../../src/drivers/ncmpio/ncmpio_getput.m4 >ncmpio_getput.c m4 -DPNETCDF -I../../../../m4 -DERANGE_FILL ../../../../src/drivers/ncmpio/ncmpio_i_getput.m4 >ncmpio_i_getput.c m4 -DPNETCDF -I../../../../m4 -DERANGE_FILL ../../../../src/drivers/ncmpio/ncmpio_varn.m4 >ncmpio_varn.c m4 -DPNETCDF -I../../../../m4 -DERANGE_FILL ../../../../src/drivers/ncmpio/ncmpio_i_varn.m4 >ncmpio_i_varn.c m4 -DPNETCDF -I../../../../m4 -DERANGE_FILL ../../../../src/drivers/ncmpio/ncmpio_attr.m4 >ncmpio_attr.c /usr/bin/make all-am make[6]: Entering directory '/build/pnetcdf-1.10.0/build-static/src/drivers/ncmpio' /bin/bash ../../../libtool --tag=CC --mode=compile /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/drivers/ncmpio -I../../../src/include -I../../../../src/include -I../../../src/include -I../../../../src/drivers/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -c -o ncmpio_driver.lo ../../../../src/drivers/ncmpio/ncmpio_driver.c libtool: compile: /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/drivers/ncmpio -I../../../src/include -I../../../../src/include -I../../../src/include -I../../../../src/drivers/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../../../src/drivers/ncmpio/ncmpio_driver.c -o ncmpio_driver.o /bin/bash ../../../libtool --tag=CC --mode=compile /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/drivers/ncmpio -I../../../src/include -I../../../../src/include -I../../../src/include -I../../../../src/drivers/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -c -o ncmpio_create.lo ../../../../src/drivers/ncmpio/ncmpio_create.c libtool: compile: /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/drivers/ncmpio -I../../../src/include -I../../../../src/include -I../../../src/include -I../../../../src/drivers/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../../../src/drivers/ncmpio/ncmpio_create.c -o ncmpio_create.o /bin/bash ../../../libtool --tag=CC --mode=compile /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/drivers/ncmpio -I../../../src/include -I../../../../src/include -I../../../src/include -I../../../../src/drivers/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -c -o ncmpio_open.lo ../../../../src/drivers/ncmpio/ncmpio_open.c libtool: compile: /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/drivers/ncmpio -I../../../src/include -I../../../../src/include -I../../../src/include -I../../../../src/drivers/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat 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-I../../../src/include -I../../../../src/include -I../../../src/include -I../../../../src/drivers/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -c -o ncmpio_sync.lo ../../../../src/drivers/ncmpio/ncmpio_sync.c libtool: compile: /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/drivers/ncmpio -I../../../src/include -I../../../../src/include -I../../../src/include -I../../../../src/drivers/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../../../src/drivers/ncmpio/ncmpio_sync.c -o ncmpio_sync.o /bin/bash ../../../libtool --tag=CC --mode=compile /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/drivers/ncmpio -I../../../src/include -I../../../../src/include -I../../../src/include -I../../../../src/drivers/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -c -o ncmpio_file_misc.lo ../../../../src/drivers/ncmpio/ncmpio_file_misc.c libtool: compile: /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/drivers/ncmpio -I../../../src/include -I../../../../src/include -I../../../src/include -I../../../../src/drivers/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../../../src/drivers/ncmpio/ncmpio_file_misc.c -o ncmpio_file_misc.o /bin/bash ../../../libtool --tag=CC --mode=compile /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/drivers/ncmpio -I../../../src/include -I../../../../src/include -I../../../src/include -I../../../../src/drivers/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -c -o ncmpio_header_get.lo ../../../../src/drivers/ncmpio/ncmpio_header_get.c libtool: compile: /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/drivers/ncmpio -I../../../src/include -I../../../../src/include -I../../../src/include -I../../../../src/drivers/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../../../src/drivers/ncmpio/ncmpio_header_get.c -o ncmpio_header_get.o /bin/bash ../../../libtool --tag=CC --mode=compile /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/drivers/ncmpio -I../../../src/include -I../../../../src/include -I../../../src/include -I../../../../src/drivers/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat 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libtool: compile: /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/drivers/ncmpio -I../../../src/include -I../../../../src/include -I../../../src/include -I../../../../src/drivers/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../../../src/drivers/ncmpio/ncmpio_dim.c -o ncmpio_dim.o /bin/bash ../../../libtool --tag=CC --mode=compile /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/drivers/ncmpio -I../../../src/include -I../../../../src/include -I../../../src/include -I../../../../src/drivers/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -c -o ncmpio_var.lo ../../../../src/drivers/ncmpio/ncmpio_var.c libtool: compile: /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/drivers/ncmpio -I../../../src/include -I../../../../src/include -I../../../src/include -I../../../../src/drivers/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../../../src/drivers/ncmpio/ncmpio_var.c -o ncmpio_var.o /bin/bash ../../../libtool --tag=CC --mode=compile /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/drivers/ncmpio -I../../../src/include -I../../../../src/include -I../../../src/include -I../../../../src/drivers/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -c -o ncmpio_bput.lo ../../../../src/drivers/ncmpio/ncmpio_bput.c libtool: compile: /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/drivers/ncmpio -I../../../src/include -I../../../../src/include -I../../../src/include -I../../../../src/drivers/include -I../../../src/drivers/include 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the default (see `U') libtool: link: ranlib .libs/libncmpio.a libtool: link: ( cd ".libs" && rm -f "libncmpio.la" && ln -s "../libncmpio.la" "libncmpio.la" ) make[6]: Leaving directory '/build/pnetcdf-1.10.0/build-static/src/drivers/ncmpio' make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-static/src/drivers/ncmpio' make[5]: Entering directory '/build/pnetcdf-1.10.0/build-static/src/drivers' make[5]: Nothing to be done for 'all-am'. make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-static/src/drivers' make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-static/src/drivers' Making all in binding make[4]: Entering directory '/build/pnetcdf-1.10.0/build-static/src/binding' Making all in cxx make[5]: Entering directory '/build/pnetcdf-1.10.0/build-static/src/binding/cxx' cat ../../../../src/binding/cxx/pnetcdf.in >pnetcdf set -e; for i in ncmpi_notyet.h ncmpiCheck.h ncmpiType.h ncmpiAtt.h ncmpiEnumType.h ncmpiGroupAtt.h ncmpiGroup.h ncmpiByte.h ncmpiChar.h ncmpiCompoundType.h ncmpiDouble.h ncmpiFloat.h ncmpiInt.h ncmpiInt64.h ncmpiOpaqueType.h ncmpiShort.h ncmpiUbyte.h ncmpiUint.h ncmpiUint64.h ncmpiUshort.h ncmpiException.h ncmpiDim.h ncmpiFile.h ncmpiVarAtt.h ncmpiVar.h ncmpiVlenType.h; do ( \ /bin/sed -e '/#ifndef/d' -e '/#define/d' -e '/#endif/d' -e '/#include/d' ../../../../src/binding/cxx/$i >> pnetcdf ; \ ) ; done /usr/bin/make all-am make[6]: Entering directory '/build/pnetcdf-1.10.0/build-static/src/binding/cxx' /bin/bash ../../../libtool --tag=CXX --mode=compile /usr/bin/mpicxx -DHAVE_CONFIG_H -I. -I../../../../src/binding/cxx -I../../../src/include -I../../../src/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -c -o ncmpi_notyet.lo ../../../../src/binding/cxx/ncmpi_notyet.cpp libtool: compile: /usr/bin/mpicxx -DHAVE_CONFIG_H -I. -I../../../../src/binding/cxx -I../../../src/include -I../../../src/include -Wdate-time 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-I../../../../src/binding/cxx -I../../../src/include -I../../../src/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -c -o ncmpiType.lo ../../../../src/binding/cxx/ncmpiType.cpp libtool: compile: /usr/bin/mpicxx -DHAVE_CONFIG_H -I. -I../../../../src/binding/cxx -I../../../src/include -I../../../src/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -c ../../../../src/binding/cxx/ncmpiType.cpp -o ncmpiType.o /bin/bash ../../../libtool --tag=CXX --mode=compile /usr/bin/mpicxx -DHAVE_CONFIG_H -I. -I../../../../src/binding/cxx -I../../../src/include -I../../../src/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -c -o ncmpiAtt.lo ../../../../src/binding/cxx/ncmpiAtt.cpp libtool: compile: /usr/bin/mpicxx 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../../../../src/binding/f90/getput_text.m4 >getput_text.fh m4 -DPNETCDF -DINTENTV=INOUT ../../../../src/binding/f90/getput_var.m4 >getput_var.fh m4 -DPNETCDF -DINTENTV=INOUT ../../../../src/binding/f90/getput_varn.m4 >getput_varn.fh m4 -DPNETCDF -DINTENTV=INOUT ../../../../src/binding/f90/getput_vard.m4 >getput_vard.fh /usr/bin/make all-am make[6]: Entering directory '/build/pnetcdf-1.10.0/build-static/src/binding/f90' /bin/bash ../../../libtool --tag=FC --mode=compile /usr/bin/mpif90 -I. -I../../../../src/binding/f90 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -c -o pnetcdf.lo pnetcdf.f90 libtool: compile: /usr/bin/mpif90 -I. -I../../../../src/binding/f90 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -c pnetcdf.f90 -o pnetcdf.o /bin/bash ../../../libtool --tag=FC --mode=link /usr/bin/mpif90 -I. -I../../../../src/binding/f90 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wl,-z,relro -Wl,--no-as-needed -lgfortran -Wl,--as-needed -o libf90.la pnetcdf.lo libtool: link: ar cru .libs/libf90.a pnetcdf.o ar: `u' modifier ignored since `D' is the default (see `U') libtool: link: ranlib .libs/libf90.a libtool: link: ( cd ".libs" && rm -f "libf90.la" && ln -s "../libf90.la" "libf90.la" ) make[6]: Leaving directory '/build/pnetcdf-1.10.0/build-static/src/binding/f90' make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-static/src/binding/f90' make[5]: Entering directory '/build/pnetcdf-1.10.0/build-static/src/binding' make[5]: Nothing to be done for 'all-am'. make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-static/src/binding' make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-static/src/binding' Making all in packaging make[4]: Entering directory '/build/pnetcdf-1.10.0/build-static/src/packaging' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-static/src/packaging' Making all in . make[4]: Entering directory '/build/pnetcdf-1.10.0/build-static/src' make[4]: Nothing to be done for 'all-am'. make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-static/src' Making all in libs make[4]: Entering directory '/build/pnetcdf-1.10.0/build-static/src/libs' /bin/bash ../../libtool --tag=CXX --mode=link /usr/bin/mpicxx -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -version-info 2:0:0 -Wl,-z,relro -Wl,--no-as-needed -lgfortran -Wl,--as-needed -o libpnetcdf.la -rpath /usr/lib/x86_64-linux-gnu ../dispatchers/libdispatchers.la ../drivers/common/libcommon.la ../drivers/ncmpio/libncmpio.la ../binding/cxx/libcxx.la ../binding/f77/libf77.la ../binding/f90/libf90.la libtool: link: (cd .libs/libpnetcdf.lax/libdispatchers.a && ar x "/build/pnetcdf-1.10.0/build-static/src/libs/../dispatchers/.libs/libdispatchers.a") libtool: link: (cd .libs/libpnetcdf.lax/libcommon.a && ar x "/build/pnetcdf-1.10.0/build-static/src/libs/../drivers/common/.libs/libcommon.a") libtool: link: (cd .libs/libpnetcdf.lax/libncmpio.a && ar x "/build/pnetcdf-1.10.0/build-static/src/libs/../drivers/ncmpio/.libs/libncmpio.a") libtool: link: (cd .libs/libpnetcdf.lax/libcxx.a && ar x "/build/pnetcdf-1.10.0/build-static/src/libs/../binding/cxx/.libs/libcxx.a") libtool: link: (cd .libs/libpnetcdf.lax/libf77.a && ar x "/build/pnetcdf-1.10.0/build-static/src/libs/../binding/f77/.libs/libf77.a") libtool: link: (cd .libs/libpnetcdf.lax/libf90.a && ar x "/build/pnetcdf-1.10.0/build-static/src/libs/../binding/f90/.libs/libf90.a") libtool: link: ar cru .libs/libpnetcdf.a .libs/libpnetcdf.lax/libdispatchers.a/attr_getput.o .libs/libpnetcdf.lax/libdispatchers.a/attribute.o .libs/libpnetcdf.lax/libdispatchers.a/dimension.o .libs/libpnetcdf.lax/libdispatchers.a/error_codes.o .libs/libpnetcdf.lax/libdispatchers.a/file.o .libs/libpnetcdf.lax/libdispatchers.a/lib_version.o .libs/libpnetcdf.lax/libdispatchers.a/var_getput.o .libs/libpnetcdf.lax/libdispatchers.a/variable.o .libs/libpnetcdf.lax/libcommon.a/check_name.o .libs/libpnetcdf.lax/libcommon.a/convert_swap.o .libs/libpnetcdf.lax/libcommon.a/create_imaptype.o .libs/libpnetcdf.lax/libcommon.a/dtype_decode.o .libs/libpnetcdf.lax/libcommon.a/error_mpi2nc.o .libs/libpnetcdf.lax/libcommon.a/error_posix2nc.o .libs/libpnetcdf.lax/libcommon.a/hash_map.o .libs/libpnetcdf.lax/libcommon.a/mem_alloc.o .libs/libpnetcdf.lax/libcommon.a/ncx.o .libs/libpnetcdf.lax/libcommon.a/pack_unpack.o .libs/libpnetcdf.lax/libcommon.a/utf8proc.o .libs/libpnetcdf.lax/libcommon.a/utils.o .libs/libpnetcdf.lax/libncmpio.a/ncmpio_attr.o .libs/libpnetcdf.lax/libncmpio.a/ncmpio_bput.o .libs/libpnetcdf.lax/libncmpio.a/ncmpio_close.o .libs/libpnetcdf.lax/libncmpio.a/ncmpio_create.o .libs/libpnetcdf.lax/libncmpio.a/ncmpio_dim.o .libs/libpnetcdf.lax/libncmpio.a/ncmpio_driver.o .libs/libpnetcdf.lax/libncmpio.a/ncmpio_enddef.o .libs/libpnetcdf.lax/libncmpio.a/ncmpio_file_misc.o .libs/libpnetcdf.lax/libncmpio.a/ncmpio_filetype.o .libs/libpnetcdf.lax/libncmpio.a/ncmpio_fill.o .libs/libpnetcdf.lax/libncmpio.a/ncmpio_getput.o .libs/libpnetcdf.lax/libncmpio.a/ncmpio_hash_func.o .libs/libpnetcdf.lax/libncmpio.a/ncmpio_header_get.o .libs/libpnetcdf.lax/libncmpio.a/ncmpio_header_put.o .libs/libpnetcdf.lax/libncmpio.a/ncmpio_i_getput.o .libs/libpnetcdf.lax/libncmpio.a/ncmpio_i_varn.o .libs/libpnetcdf.lax/libncmpio.a/ncmpio_open.o .libs/libpnetcdf.lax/libncmpio.a/ncmpio_sync.o .libs/libpnetcdf.lax/libncmpio.a/ncmpio_util.o .libs/libpnetcdf.lax/libncmpio.a/ncmpio_var.o .libs/libpnetcdf.lax/libncmpio.a/ncmpio_vard.o .libs/libpnetcdf.lax/libncmpio.a/ncmpio_varn.o .libs/libpnetcdf.lax/libncmpio.a/ncmpio_wait.o .libs/libpnetcdf.lax/libcxx.a/ncmpiAtt.o .libs/libpnetcdf.lax/libcxx.a/ncmpiByte.o .libs/libpnetcdf.lax/libcxx.a/ncmpiChar.o .libs/libpnetcdf.lax/libcxx.a/ncmpiCheck.o .libs/libpnetcdf.lax/libcxx.a/ncmpiCompoundType.o .libs/libpnetcdf.lax/libcxx.a/ncmpiDim.o .libs/libpnetcdf.lax/libcxx.a/ncmpiDouble.o .libs/libpnetcdf.lax/libcxx.a/ncmpiEnumType.o .libs/libpnetcdf.lax/libcxx.a/ncmpiException.o .libs/libpnetcdf.lax/libcxx.a/ncmpiFile.o .libs/libpnetcdf.lax/libcxx.a/ncmpiFloat.o .libs/libpnetcdf.lax/libcxx.a/ncmpiGroup.o .libs/libpnetcdf.lax/libcxx.a/ncmpiGroupAtt.o .libs/libpnetcdf.lax/libcxx.a/ncmpiInt.o .libs/libpnetcdf.lax/libcxx.a/ncmpiInt64.o .libs/libpnetcdf.lax/libcxx.a/ncmpiOpaqueType.o .libs/libpnetcdf.lax/libcxx.a/ncmpiShort.o .libs/libpnetcdf.lax/libcxx.a/ncmpiType.o .libs/libpnetcdf.lax/libcxx.a/ncmpiUbyte.o .libs/libpnetcdf.lax/libcxx.a/ncmpiUint.o .libs/libpnetcdf.lax/libcxx.a/ncmpiUint64.o .libs/libpnetcdf.lax/libcxx.a/ncmpiUshort.o .libs/libpnetcdf.lax/libcxx.a/ncmpiVar.o .libs/libpnetcdf.lax/libcxx.a/ncmpiVarAtt.o .libs/libpnetcdf.lax/libcxx.a/ncmpiVlenType.o .libs/libpnetcdf.lax/libcxx.a/ncmpi_notyet.o .libs/libpnetcdf.lax/libf77.a/allf.o .libs/libpnetcdf.lax/libf77.a/inq_libversf.o .libs/libpnetcdf.lax/libf77.a/issyserrf.o .libs/libpnetcdf.lax/libf77.a/strerrnof.o .libs/libpnetcdf.lax/libf77.a/strerrorf.o .libs/libpnetcdf.lax/libf77.a/xinq_libversf.o .libs/libpnetcdf.lax/libf77.a/xstrerrnof.o .libs/libpnetcdf.lax/libf77.a/xstrerrorf.o .libs/libpnetcdf.lax/libf90.a/pnetcdf.o ar: `u' modifier ignored since `D' is the default (see `U') libtool: link: ranlib .libs/libpnetcdf.a libtool: link: rm -fr .libs/libpnetcdf.lax libtool: link: ( cd ".libs" && rm -f "libpnetcdf.la" && ln -s "../libpnetcdf.la" "libpnetcdf.la" ) make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-static/src/libs' Making all in utils make[4]: Entering directory '/build/pnetcdf-1.10.0/build-static/src/utils' Making all in ncmpigen make[5]: Entering directory '/build/pnetcdf-1.10.0/build-static/src/utils/ncmpigen' /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/utils/ncmpigen -I../../../src/include -I../../../../src/include -I../../../src/include -I../../../src/drivers/ncmpio -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -c -o main.o ../../../../src/utils/ncmpigen/main.c /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/utils/ncmpigen -I../../../src/include -I../../../../src/include -I../../../src/include -I../../../src/drivers/ncmpio -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -c -o load.o ../../../../src/utils/ncmpigen/load.c /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/utils/ncmpigen -I../../../src/include -I../../../../src/include -I../../../src/include -I../../../src/drivers/ncmpio -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -c -o escapes.o ../../../../src/utils/ncmpigen/escapes.c /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/utils/ncmpigen -I../../../src/include -I../../../../src/include -I../../../src/include -I../../../src/drivers/ncmpio -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -c -o getfill.o ../../../../src/utils/ncmpigen/getfill.c /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/utils/ncmpigen -I../../../src/include -I../../../../src/include -I../../../src/include -I../../../src/drivers/ncmpio -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -c -o init.o ../../../../src/utils/ncmpigen/init.c /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/utils/ncmpigen -I../../../src/include -I../../../../src/include -I../../../src/include -I../../../src/drivers/ncmpio -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -c -o genlib.o ../../../../src/utils/ncmpigen/genlib.c /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/utils/ncmpigen -I../../../src/include -I../../../../src/include -I../../../src/include -I../../../src/drivers/ncmpio -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -c -o ncmpigentab.o ../../../../src/utils/ncmpigen/ncmpigentab.c /bin/bash ../../../libtool --tag=CC --mode=link /usr/bin/mpicc -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,--no-as-needed -lgfortran -Wl,--as-needed -o ncmpigen main.o load.o escapes.o getfill.o init.o genlib.o ncmpigentab.o ../../../src/libs/libpnetcdf.la libtool: link: /usr/bin/mpicc -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -Wl,--no-as-needed -Wl,--as-needed -o ncmpigen main.o load.o escapes.o getfill.o init.o genlib.o ncmpigentab.o ../../../src/libs/.libs/libpnetcdf.a -lgfortran make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-static/src/utils/ncmpigen' Making all in ncmpidump make[5]: Entering directory '/build/pnetcdf-1.10.0/build-static/src/utils/ncmpidump' /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/utils/ncmpidump -I../../../src/include -I../../../../src/include -I../../../src/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -c -o ncmpidump.o ../../../../src/utils/ncmpidump/ncmpidump.c /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/utils/ncmpidump -I../../../src/include -I../../../../src/include -I../../../src/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -c -o vardata.o ../../../../src/utils/ncmpidump/vardata.c /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/utils/ncmpidump -I../../../src/include -I../../../../src/include -I../../../src/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -c -o dumplib.o ../../../../src/utils/ncmpidump/dumplib.c /bin/bash ../../../libtool --tag=CC --mode=link /usr/bin/mpicc -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,--no-as-needed -lgfortran -Wl,--as-needed -o ncmpidump ncmpidump.o vardata.o dumplib.o ../../../src/libs/libpnetcdf.la libtool: link: /usr/bin/mpicc -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -Wl,--no-as-needed -Wl,--as-needed -o ncmpidump ncmpidump.o vardata.o dumplib.o ../../../src/libs/.libs/libpnetcdf.a -lgfortran make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-static/src/utils/ncmpidump' Making all in ncmpidiff make[5]: Entering directory '/build/pnetcdf-1.10.0/build-static/src/utils/ncmpidiff' /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/utils/ncmpidiff -I../../../src/include -I../../../../src/include -I../../../src/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -c -o ncmpidiff.o ../../../../src/utils/ncmpidiff/ncmpidiff.c /bin/bash ../../../libtool --tag=CC --mode=link /usr/bin/mpicc -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,--no-as-needed -lgfortran -Wl,--as-needed -o ncmpidiff ncmpidiff.o ../../../src/libs/libpnetcdf.la libtool: link: /usr/bin/mpicc -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -Wl,--no-as-needed -Wl,--as-needed -o ncmpidiff ncmpidiff.o ../../../src/libs/.libs/libpnetcdf.a -lgfortran make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-static/src/utils/ncmpidiff' Making all in ncvalidator make[5]: Entering directory '/build/pnetcdf-1.10.0/build-static/src/utils/ncvalidator' /usr/bin/gcc -o ncvalidator ../../../../src/utils/ncvalidator/ncvalidator.c make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-static/src/utils/ncvalidator' Making all in pnetcdf_version make[5]: Entering directory '/build/pnetcdf-1.10.0/build-static/src/utils/pnetcdf_version' /usr/bin/gcc -DMPICC="\"/usr/bin/mpicc\"" -DCFLAGS="\"-g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security\"" -DCONFIGURE_ARGS_CLEAN="\"--build=x86_64-linux-gnu --prefix=/usr --includedir=/usr/include --mandir=/usr/share/man --infodir=/usr/share/info --sysconfdir=/etc --localstatedir=/var --disable-silent-rules --libdir=/usr/lib/x86_64-linux-gnu --libexecdir=/usr/lib/x86_64-linux-gnu --disable-maintainer-mode --disable-dependency-tracking\"" -DPNETCDF_VERSION="\"1.10.0\"" -DMPICXX="\"/usr/bin/mpicxx\"" -DCXXFLAGS="\"-g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security\"" -DMPIF77="\"/usr/bin/mpif77\"" -DFFLAGS="\"-g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong\"" -DMPIF90="\"/usr/bin/mpif90\"" -DFCFLAGS="\"-g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong\"" -o pnetcdf_version ../../../../src/utils/pnetcdf_version/pnetcdf_version.c make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-static/src/utils/pnetcdf_version' Making all in ncoffsets make[5]: Entering directory '/build/pnetcdf-1.10.0/build-static/src/utils/ncoffsets' /usr/bin/gcc -o ncoffsets ../../../../src/utils/ncoffsets/ncoffsets.c make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-static/src/utils/ncoffsets' make[5]: Entering directory '/build/pnetcdf-1.10.0/build-static/src/utils' make[5]: Nothing to be done for 'all-am'. make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-static/src/utils' make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-static/src/utils' make[3]: Leaving directory '/build/pnetcdf-1.10.0/build-static/src' Making all in man make[3]: Entering directory '/build/pnetcdf-1.10.0/build-static/man' m4 -DPNETCDF -DAPI=C -DPNETCDF_VERSION=1.10.0 ../../man/pnetcdf.m4 > pnetcdf.3 || rm -f pnetcdf.3 m4 -DPNETCDF -DAPI=F -DPNETCDF_VERSION=1.10.0 ../../man/pnetcdf.m4 > pnetcdf_f77.3 || rm -f pnetcdf_f77.3 m4 -DPNETCDF -DPNETCDF_VERSION=1.10.0 ../../man/pnetcdf_f90.m4 > pnetcdf_f90.3 || rm -f pnetcdf_f90.3 make[3]: Leaving directory '/build/pnetcdf-1.10.0/build-static/man' Making all in examples make[3]: Entering directory '/build/pnetcdf-1.10.0/build-static/examples' Making all in C make[4]: Entering directory '/build/pnetcdf-1.10.0/build-static/examples/C' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-static/examples/C' Making all in tutorial make[4]: Entering directory '/build/pnetcdf-1.10.0/build-static/examples/tutorial' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-static/examples/tutorial' Making all in CXX make[4]: Entering directory '/build/pnetcdf-1.10.0/build-static/examples/CXX' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-static/examples/CXX' Making all in F77 make[4]: Entering directory '/build/pnetcdf-1.10.0/build-static/examples/F77' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-static/examples/F77' Making all in F90 make[4]: Entering directory '/build/pnetcdf-1.10.0/build-static/examples/F90' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-static/examples/F90' make[4]: Entering directory '/build/pnetcdf-1.10.0/build-static/examples' make[4]: Nothing to be done for 'all-am'. make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-static/examples' make[3]: Leaving directory '/build/pnetcdf-1.10.0/build-static/examples' Making all in benchmarks make[3]: Entering directory '/build/pnetcdf-1.10.0/build-static/benchmarks' Making all in C make[4]: Entering directory '/build/pnetcdf-1.10.0/build-static/benchmarks/C' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-static/benchmarks/C' Making all in FLASH-IO make[4]: Entering directory '/build/pnetcdf-1.10.0/build-static/benchmarks/FLASH-IO' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-static/benchmarks/FLASH-IO' make[4]: Entering directory '/build/pnetcdf-1.10.0/build-static/benchmarks' make[4]: Nothing to be done for 'all-am'. make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-static/benchmarks' make[3]: Leaving directory '/build/pnetcdf-1.10.0/build-static/benchmarks' Making all in test make[3]: Entering directory '/build/pnetcdf-1.10.0/build-static/test' Making all in common make[4]: Entering directory '/build/pnetcdf-1.10.0/build-static/test/common' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-static/test/common' Making all in C make[4]: Entering directory '/build/pnetcdf-1.10.0/build-static/test/C' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-static/test/C' Making all in fandc make[4]: Entering directory '/build/pnetcdf-1.10.0/build-static/test/fandc' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-static/test/fandc' Making all in nc_test make[4]: Entering directory '/build/pnetcdf-1.10.0/build-static/test/nc_test' m4 -DPNETCDF -I../../../m4 ../../../test/nc_test/tests.h.m4 > tests.h /usr/bin/make all-am make[5]: Entering directory '/build/pnetcdf-1.10.0/build-static/test/nc_test' make[5]: Nothing to be done for 'all-am'. make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-static/test/nc_test' make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-static/test/nc_test' Making all in cdf_format make[4]: Entering directory '/build/pnetcdf-1.10.0/build-static/test/cdf_format' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-static/test/cdf_format' Making all in header make[4]: Entering directory '/build/pnetcdf-1.10.0/build-static/test/header' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-static/test/header' Making all in testcases make[4]: Entering directory '/build/pnetcdf-1.10.0/build-static/test/testcases' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-static/test/testcases' Making all in nonblocking make[4]: Entering directory '/build/pnetcdf-1.10.0/build-static/test/nonblocking' m4 -DPNETCDF -I../../../m4 ../../../test/nonblocking/bput_varn.m4 >bput_varn.c m4 -DPNETCDF -I../../../m4 ../../../test/nonblocking/column_wise.m4 >column_wise.c /usr/bin/make all-am make[5]: Entering directory '/build/pnetcdf-1.10.0/build-static/test/nonblocking' make[5]: Nothing to be done for 'all-am'. make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-static/test/nonblocking' make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-static/test/nonblocking' Making all in largefile make[4]: Entering directory '/build/pnetcdf-1.10.0/build-static/test/largefile' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-static/test/largefile' Making all in CXX make[4]: Entering directory '/build/pnetcdf-1.10.0/build-static/test/CXX' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-static/test/CXX' Making all in nf_test make[4]: Entering directory '/build/pnetcdf-1.10.0/build-static/test/nf_test' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-static/test/nf_test' Making all in nf90_test make[4]: Entering directory '/build/pnetcdf-1.10.0/build-static/test/nf90_test' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-static/test/nf90_test' Making all in F90 make[4]: Entering directory '/build/pnetcdf-1.10.0/build-static/test/F90' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-static/test/F90' make[4]: Entering directory '/build/pnetcdf-1.10.0/build-static/test' make[4]: Nothing to be done for 'all-am'. make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-static/test' make[3]: Leaving directory '/build/pnetcdf-1.10.0/build-static/test' make[3]: Entering directory '/build/pnetcdf-1.10.0/build-static' make[3]: Nothing to be done for 'all-am'. make[3]: Leaving directory '/build/pnetcdf-1.10.0/build-static' make[2]: Leaving directory '/build/pnetcdf-1.10.0/build-static' /usr/bin/make -C build-shared make[2]: Entering directory '/build/pnetcdf-1.10.0/build-shared' Making all in src make[3]: Entering directory '/build/pnetcdf-1.10.0/build-shared/src' Making all in include make[4]: Entering directory '/build/pnetcdf-1.10.0/build-shared/src/include' /usr/bin/make all-am make[5]: Entering directory '/build/pnetcdf-1.10.0/build-shared/src/include' make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/src/include' make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/src/include' Making all in dispatchers make[4]: Entering directory '/build/pnetcdf-1.10.0/build-shared/src/dispatchers' m4 -DPNETCDF -I../../../m4 ../../../src/dispatchers/attr_getput.m4 >attr_getput.c m4 -DPNETCDF -I../../../m4 ../../../src/dispatchers/var_getput.m4 >var_getput.c /usr/bin/make all-am make[5]: Entering directory '/build/pnetcdf-1.10.0/build-shared/src/dispatchers' /bin/bash ../../libtool --tag=CC --mode=compile /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/dispatchers -I../../src/include -I../../../src/include -I../../src/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c -o lib_version.lo ../../../src/dispatchers/lib_version.c libtool: compile: /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/dispatchers -I../../src/include -I../../../src/include -I../../src/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c ../../../src/dispatchers/lib_version.c -o lib_version.o /bin/bash ../../libtool --tag=CC --mode=compile /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/dispatchers -I../../src/include -I../../../src/include -I../../src/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c -o file.lo ../../../src/dispatchers/file.c libtool: compile: /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/dispatchers -I../../src/include -I../../../src/include -I../../src/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c ../../../src/dispatchers/file.c -o file.o /bin/bash ../../libtool --tag=CC --mode=compile /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/dispatchers -I../../src/include -I../../../src/include -I../../src/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c -o dimension.lo ../../../src/dispatchers/dimension.c libtool: compile: /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/dispatchers -I../../src/include -I../../../src/include -I../../src/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c ../../../src/dispatchers/dimension.c -o dimension.o /bin/bash ../../libtool --tag=CC --mode=compile /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/dispatchers -I../../src/include -I../../../src/include -I../../src/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c -o variable.lo ../../../src/dispatchers/variable.c libtool: compile: /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/dispatchers -I../../src/include -I../../../src/include -I../../src/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c ../../../src/dispatchers/variable.c -o variable.o /bin/bash ../../libtool --tag=CC --mode=compile /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/dispatchers -I../../src/include -I../../../src/include -I../../src/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c -o attribute.lo ../../../src/dispatchers/attribute.c libtool: compile: /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/dispatchers -I../../src/include -I../../../src/include -I../../src/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c ../../../src/dispatchers/attribute.c -o attribute.o /bin/bash ../../libtool --tag=CC --mode=compile /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/dispatchers -I../../src/include -I../../../src/include -I../../src/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c -o error_codes.lo ../../../src/dispatchers/error_codes.c libtool: compile: /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/dispatchers -I../../src/include -I../../../src/include -I../../src/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c ../../../src/dispatchers/error_codes.c -o error_codes.o /bin/bash ../../libtool --tag=CC --mode=compile /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/dispatchers -I../../src/include -I../../../src/include -I../../src/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c -o attr_getput.lo attr_getput.c libtool: compile: /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/dispatchers -I../../src/include -I../../../src/include -I../../src/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c attr_getput.c -o attr_getput.o /bin/bash ../../libtool --tag=CC --mode=compile /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/dispatchers -I../../src/include -I../../../src/include -I../../src/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c -o var_getput.lo var_getput.c libtool: compile: /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../src/dispatchers -I../../src/include -I../../../src/include -I../../src/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c var_getput.c -o var_getput.o /bin/bash ../../libtool --tag=CC --mode=link /usr/bin/mpicc -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -Wl,-z,relro -Wl,--no-as-needed -lgfortran -Wl,--as-needed -g -o libdispatchers.la lib_version.lo file.lo dimension.lo variable.lo attribute.lo error_codes.lo attr_getput.lo var_getput.lo libtool: link: ar cru .libs/libdispatchers.a lib_version.o file.o dimension.o variable.o attribute.o error_codes.o attr_getput.o var_getput.o ar: `u' modifier ignored since `D' is the default (see `U') libtool: link: ranlib .libs/libdispatchers.a libtool: link: ( cd ".libs" && rm -f "libdispatchers.la" && ln -s "../libdispatchers.la" "libdispatchers.la" ) make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/src/dispatchers' make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/src/dispatchers' Making all in drivers make[4]: Entering directory '/build/pnetcdf-1.10.0/build-shared/src/drivers' Making all in include make[5]: Entering directory '/build/pnetcdf-1.10.0/build-shared/src/drivers/include' m4 -DPNETCDF -I../../../../m4 ../../../../src/drivers/include/ncx_h.m4 >ncx.h /usr/bin/make all-am make[6]: Entering directory '/build/pnetcdf-1.10.0/build-shared/src/drivers/include' make[6]: Nothing to be done for 'all-am'. make[6]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/src/drivers/include' make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/src/drivers/include' Making all in common make[5]: Entering directory '/build/pnetcdf-1.10.0/build-shared/src/drivers/common' m4 -DPNETCDF -I../../../../m4 -DERANGE_FILL ../../../../src/drivers/common/ncx.m4 >ncx.c m4 -DPNETCDF -I../../../../m4 -DERANGE_FILL ../../../../src/drivers/common/convert_swap.m4 >convert_swap.c /usr/bin/make all-am make[6]: Entering directory '/build/pnetcdf-1.10.0/build-shared/src/drivers/common' /bin/bash ../../../libtool --tag=CC --mode=compile /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/drivers/common -I../../../src/include -I../../../../src/include -I../../../../src/drivers/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c -o utf8proc.lo ../../../../src/drivers/common/utf8proc.c libtool: compile: /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/drivers/common -I../../../src/include -I../../../../src/include -I../../../../src/drivers/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c ../../../../src/drivers/common/utf8proc.c -o utf8proc.o /bin/bash ../../../libtool --tag=CC --mode=compile /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/drivers/common -I../../../src/include -I../../../../src/include -I../../../../src/drivers/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c -o mem_alloc.lo ../../../../src/drivers/common/mem_alloc.c libtool: compile: /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/drivers/common -I../../../src/include -I../../../../src/include -I../../../../src/drivers/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c ../../../../src/drivers/common/mem_alloc.c -o mem_alloc.o /bin/bash ../../../libtool --tag=CC --mode=compile /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/drivers/common -I../../../src/include -I../../../../src/include -I../../../../src/drivers/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c -o dtype_decode.lo ../../../../src/drivers/common/dtype_decode.c libtool: compile: /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/drivers/common -I../../../src/include -I../../../../src/include -I../../../../src/drivers/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c ../../../../src/drivers/common/dtype_decode.c -o dtype_decode.o /bin/bash ../../../libtool --tag=CC --mode=compile /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/drivers/common -I../../../src/include -I../../../../src/include -I../../../../src/drivers/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c -o create_imaptype.lo ../../../../src/drivers/common/create_imaptype.c libtool: compile: /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/drivers/common -I../../../src/include -I../../../../src/include -I../../../../src/drivers/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c ../../../../src/drivers/common/create_imaptype.c -o create_imaptype.o /bin/bash ../../../libtool --tag=CC --mode=compile /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/drivers/common -I../../../src/include -I../../../../src/include -I../../../../src/drivers/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c -o error_mpi2nc.lo ../../../../src/drivers/common/error_mpi2nc.c libtool: compile: /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/drivers/common -I../../../src/include -I../../../../src/include -I../../../../src/drivers/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c ../../../../src/drivers/common/error_mpi2nc.c -o error_mpi2nc.o /bin/bash ../../../libtool --tag=CC --mode=compile /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/drivers/common -I../../../src/include -I../../../../src/include -I../../../../src/drivers/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c -o check_name.lo ../../../../src/drivers/common/check_name.c libtool: compile: /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/drivers/common -I../../../src/include -I../../../../src/include -I../../../../src/drivers/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c ../../../../src/drivers/common/check_name.c -o check_name.o /bin/bash ../../../libtool --tag=CC --mode=compile /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/drivers/common -I../../../src/include -I../../../../src/include -I../../../../src/drivers/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c -o pack_unpack.lo ../../../../src/drivers/common/pack_unpack.c libtool: compile: /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/drivers/common -I../../../src/include -I../../../../src/include -I../../../../src/drivers/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c ../../../../src/drivers/common/pack_unpack.c -o pack_unpack.o /bin/bash ../../../libtool --tag=CC --mode=compile /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/drivers/common -I../../../src/include -I../../../../src/include -I../../../../src/drivers/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c -o utils.lo ../../../../src/drivers/common/utils.c libtool: compile: /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/drivers/common -I../../../src/include -I../../../../src/include -I../../../../src/drivers/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c ../../../../src/drivers/common/utils.c -o utils.o /bin/bash ../../../libtool --tag=CC --mode=compile /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/drivers/common -I../../../src/include -I../../../../src/include -I../../../../src/drivers/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c -o error_posix2nc.lo ../../../../src/drivers/common/error_posix2nc.c libtool: compile: /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/drivers/common -I../../../src/include -I../../../../src/include -I../../../../src/drivers/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c ../../../../src/drivers/common/error_posix2nc.c -o error_posix2nc.o /bin/bash ../../../libtool --tag=CC --mode=compile /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/drivers/common -I../../../src/include -I../../../../src/include -I../../../../src/drivers/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c -o hash_map.lo ../../../../src/drivers/common/hash_map.c libtool: compile: /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/drivers/common -I../../../src/include -I../../../../src/include -I../../../../src/drivers/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c ../../../../src/drivers/common/hash_map.c -o hash_map.o /bin/bash ../../../libtool --tag=CC --mode=compile /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/drivers/common -I../../../src/include -I../../../../src/include -I../../../../src/drivers/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c -o ncx.lo ncx.c libtool: compile: /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/drivers/common -I../../../src/include -I../../../../src/include -I../../../../src/drivers/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c ncx.c -o ncx.o /bin/bash ../../../libtool --tag=CC --mode=compile /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/drivers/common -I../../../src/include -I../../../../src/include -I../../../../src/drivers/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c -o convert_swap.lo convert_swap.c libtool: compile: /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/drivers/common -I../../../src/include -I../../../../src/include -I../../../../src/drivers/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c convert_swap.c -o convert_swap.o /bin/bash ../../../libtool --tag=CC --mode=link /usr/bin/mpicc -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -Wl,-z,relro -Wl,--no-as-needed -lgfortran -Wl,--as-needed -g -o libcommon.la utf8proc.lo mem_alloc.lo dtype_decode.lo create_imaptype.lo error_mpi2nc.lo check_name.lo pack_unpack.lo utils.lo error_posix2nc.lo hash_map.lo ncx.lo convert_swap.lo libtool: link: ar cru .libs/libcommon.a utf8proc.o mem_alloc.o dtype_decode.o create_imaptype.o error_mpi2nc.o check_name.o pack_unpack.o utils.o error_posix2nc.o hash_map.o ncx.o convert_swap.o ar: `u' modifier ignored since `D' is the default (see `U') libtool: link: ranlib .libs/libcommon.a libtool: link: ( cd ".libs" && rm -f "libcommon.la" && ln -s "../libcommon.la" "libcommon.la" ) make[6]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/src/drivers/common' make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/src/drivers/common' Making all in ncmpio make[5]: Entering directory '/build/pnetcdf-1.10.0/build-shared/src/drivers/ncmpio' m4 -DPNETCDF -I../../../../m4 -DERANGE_FILL ../../../../src/drivers/ncmpio/ncmpio_getput.m4 >ncmpio_getput.c m4 -DPNETCDF -I../../../../m4 -DERANGE_FILL ../../../../src/drivers/ncmpio/ncmpio_i_getput.m4 >ncmpio_i_getput.c m4 -DPNETCDF -I../../../../m4 -DERANGE_FILL ../../../../src/drivers/ncmpio/ncmpio_varn.m4 >ncmpio_varn.c m4 -DPNETCDF -I../../../../m4 -DERANGE_FILL ../../../../src/drivers/ncmpio/ncmpio_i_varn.m4 >ncmpio_i_varn.c m4 -DPNETCDF -I../../../../m4 -DERANGE_FILL ../../../../src/drivers/ncmpio/ncmpio_attr.m4 >ncmpio_attr.c /usr/bin/make all-am make[6]: Entering directory '/build/pnetcdf-1.10.0/build-shared/src/drivers/ncmpio' /bin/bash ../../../libtool --tag=CC --mode=compile /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/drivers/ncmpio -I../../../src/include -I../../../../src/include -I../../../src/include -I../../../../src/drivers/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c -o ncmpio_driver.lo ../../../../src/drivers/ncmpio/ncmpio_driver.c libtool: compile: /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/drivers/ncmpio -I../../../src/include -I../../../../src/include -I../../../src/include -I../../../../src/drivers/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c ../../../../src/drivers/ncmpio/ncmpio_driver.c -o ncmpio_driver.o /bin/bash 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-I../../../../src/drivers/ncmpio -I../../../src/include -I../../../../src/include -I../../../src/include -I../../../../src/drivers/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c -o ncmpio_open.lo ../../../../src/drivers/ncmpio/ncmpio_open.c libtool: compile: /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/drivers/ncmpio -I../../../src/include -I../../../../src/include -I../../../src/include -I../../../../src/drivers/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c ../../../../src/drivers/ncmpio/ncmpio_open.c -o ncmpio_open.o /bin/bash ../../../libtool --tag=CC --mode=compile /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/drivers/ncmpio -I../../../src/include -I../../../../src/include -I../../../src/include -I../../../../src/drivers/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c -o ncmpio_enddef.lo ../../../../src/drivers/ncmpio/ncmpio_enddef.c libtool: compile: /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/drivers/ncmpio -I../../../src/include -I../../../../src/include -I../../../src/include -I../../../../src/drivers/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c ../../../../src/drivers/ncmpio/ncmpio_enddef.c -o ncmpio_enddef.o /bin/bash ../../../libtool --tag=CC --mode=compile /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/drivers/ncmpio -I../../../src/include -I../../../../src/include -I../../../src/include -I../../../../src/drivers/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c -o ncmpio_close.lo ../../../../src/drivers/ncmpio/ncmpio_close.c libtool: compile: /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/drivers/ncmpio -I../../../src/include -I../../../../src/include -I../../../src/include -I../../../../src/drivers/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c ../../../../src/drivers/ncmpio/ncmpio_close.c -o ncmpio_close.o /bin/bash ../../../libtool --tag=CC --mode=compile /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/drivers/ncmpio -I../../../src/include -I../../../../src/include -I../../../src/include -I../../../../src/drivers/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c -o ncmpio_sync.lo ../../../../src/drivers/ncmpio/ncmpio_sync.c libtool: compile: /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/drivers/ncmpio -I../../../src/include -I../../../../src/include -I../../../src/include -I../../../../src/drivers/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c ../../../../src/drivers/ncmpio/ncmpio_sync.c -o ncmpio_sync.o /bin/bash ../../../libtool --tag=CC --mode=compile /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/drivers/ncmpio -I../../../src/include -I../../../../src/include -I../../../src/include -I../../../../src/drivers/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c -o ncmpio_file_misc.lo ../../../../src/drivers/ncmpio/ncmpio_file_misc.c libtool: compile: /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/drivers/ncmpio -I../../../src/include -I../../../../src/include -I../../../src/include -I../../../../src/drivers/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c ../../../../src/drivers/ncmpio/ncmpio_file_misc.c -o ncmpio_file_misc.o /bin/bash ../../../libtool --tag=CC --mode=compile /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/drivers/ncmpio -I../../../src/include -I../../../../src/include -I../../../src/include -I../../../../src/drivers/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c -o ncmpio_header_get.lo 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ncmpio_i_getput.c libtool: compile: /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/drivers/ncmpio -I../../../src/include -I../../../../src/include -I../../../src/include -I../../../../src/drivers/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c ncmpio_i_getput.c -o ncmpio_i_getput.o /bin/bash ../../../libtool --tag=CC --mode=compile /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/drivers/ncmpio -I../../../src/include -I../../../../src/include -I../../../src/include -I../../../../src/drivers/include -I../../../src/drivers/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c -o ncmpio_varn.lo ncmpio_varn.c libtool: compile: /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/drivers/ncmpio -I../../../src/include 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ncmpio_varn.o ncmpio_i_varn.o ncmpio_attr.o ar: `u' modifier ignored since `D' is the default (see `U') libtool: link: ranlib .libs/libncmpio.a libtool: link: ( cd ".libs" && rm -f "libncmpio.la" && ln -s "../libncmpio.la" "libncmpio.la" ) make[6]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/src/drivers/ncmpio' make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/src/drivers/ncmpio' make[5]: Entering directory '/build/pnetcdf-1.10.0/build-shared/src/drivers' make[5]: Nothing to be done for 'all-am'. make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/src/drivers' make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/src/drivers' Making all in binding make[4]: Entering directory '/build/pnetcdf-1.10.0/build-shared/src/binding' Making all in cxx make[5]: Entering directory '/build/pnetcdf-1.10.0/build-shared/src/binding/cxx' cat ../../../../src/binding/cxx/pnetcdf.in >pnetcdf set -e; for i in ncmpi_notyet.h ncmpiCheck.h ncmpiType.h ncmpiAtt.h ncmpiEnumType.h ncmpiGroupAtt.h ncmpiGroup.h ncmpiByte.h ncmpiChar.h ncmpiCompoundType.h ncmpiDouble.h ncmpiFloat.h ncmpiInt.h ncmpiInt64.h ncmpiOpaqueType.h ncmpiShort.h ncmpiUbyte.h ncmpiUint.h ncmpiUint64.h ncmpiUshort.h ncmpiException.h ncmpiDim.h ncmpiFile.h ncmpiVarAtt.h ncmpiVar.h ncmpiVlenType.h; do ( \ /bin/sed -e '/#ifndef/d' -e '/#define/d' -e '/#endif/d' -e '/#include/d' ../../../../src/binding/cxx/$i >> pnetcdf ; \ ) ; done /usr/bin/make all-am make[6]: Entering directory '/build/pnetcdf-1.10.0/build-shared/src/binding/cxx' /bin/bash ../../../libtool --tag=CXX --mode=compile /usr/bin/mpicxx -DHAVE_CONFIG_H -I. -I../../../../src/binding/cxx -I../../../src/include -I../../../src/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c -o ncmpi_notyet.lo ../../../../src/binding/cxx/ncmpi_notyet.cpp libtool: compile: /usr/bin/mpicxx -DHAVE_CONFIG_H -I. 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ncmpiCheck.o /bin/bash ../../../libtool --tag=CXX --mode=compile /usr/bin/mpicxx -DHAVE_CONFIG_H -I. -I../../../../src/binding/cxx -I../../../src/include -I../../../src/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c -o ncmpiType.lo ../../../../src/binding/cxx/ncmpiType.cpp libtool: compile: /usr/bin/mpicxx -DHAVE_CONFIG_H -I. -I../../../../src/binding/cxx -I../../../src/include -I../../../src/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c ../../../../src/binding/cxx/ncmpiType.cpp -o ncmpiType.o /bin/bash ../../../libtool --tag=CXX --mode=compile /usr/bin/mpicxx -DHAVE_CONFIG_H -I. -I../../../../src/binding/cxx -I../../../src/include -I../../../src/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong 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-g -c -o xstrerrnof.lo xstrerrnof.c libtool: compile: /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/binding/f77 -I../../../src/include -I../../../../src/include -I../../../src/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c xstrerrnof.c -o xstrerrnof.o /bin/bash ../../../libtool --tag=CC --mode=compile /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/binding/f77 -I../../../src/include -I../../../../src/include -I../../../src/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c -o xinq_libversf.lo xinq_libversf.c libtool: compile: /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/binding/f77 -I../../../src/include -I../../../../src/include -I../../../src/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c xinq_libversf.c -o xinq_libversf.o /bin/bash ../../../libtool --tag=CC --mode=compile /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/binding/f77 -I../../../src/include -I../../../../src/include -I../../../src/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c -o allf.lo allf.c libtool: compile: /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/binding/f77 -I../../../src/include -I../../../../src/include -I../../../src/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c allf.c -o allf.o /bin/bash ../../../libtool --tag=F77 --mode=link /usr/bin/mpif77 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -fPIC -g -Wl,-z,relro -Wl,--no-as-needed -lgfortran -Wl,--as-needed -g -o libf77.la strerrorf.lo strerrnof.lo inq_libversf.lo issyserrf.lo xstrerrorf.lo xstrerrnof.lo xinq_libversf.lo allf.lo libtool: link: ar cru .libs/libf77.a strerrorf.o strerrnof.o inq_libversf.o issyserrf.o xstrerrorf.o xstrerrnof.o xinq_libversf.o allf.o ar: `u' modifier ignored since `D' is the default (see `U') libtool: link: ranlib .libs/libf77.a libtool: link: ( cd ".libs" && rm -f "libf77.la" && ln -s "../libf77.la" "libf77.la" ) make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/src/binding/f77' Making all in f90 make[5]: Entering directory '/build/pnetcdf-1.10.0/build-shared/src/binding/f90' m4 -DPNETCDF -DINTENTV=INOUT ../../../../src/binding/f90/getput_text.m4 >getput_text.fh m4 -DPNETCDF -DINTENTV=INOUT ../../../../src/binding/f90/getput_var.m4 >getput_var.fh m4 -DPNETCDF -DINTENTV=INOUT ../../../../src/binding/f90/getput_varn.m4 >getput_varn.fh m4 -DPNETCDF -DINTENTV=INOUT ../../../../src/binding/f90/getput_vard.m4 >getput_vard.fh /usr/bin/make all-am make[6]: Entering directory '/build/pnetcdf-1.10.0/build-shared/src/binding/f90' /bin/bash ../../../libtool --tag=FC --mode=compile /usr/bin/mpif90 -I. -I../../../../src/binding/f90 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -fPIC -g -c -o pnetcdf.lo pnetcdf.f90 libtool: compile: /usr/bin/mpif90 -I. -I../../../../src/binding/f90 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -fPIC -g -c pnetcdf.f90 -o pnetcdf.o /bin/bash ../../../libtool --tag=FC --mode=link /usr/bin/mpif90 -I. -I../../../../src/binding/f90 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -fPIC -g -Wl,-z,relro -Wl,--no-as-needed -lgfortran -Wl,--as-needed -g -o libf90.la pnetcdf.lo libtool: link: ar cru .libs/libf90.a pnetcdf.o ar: `u' modifier ignored since `D' is the default (see `U') libtool: link: ranlib .libs/libf90.a libtool: link: ( cd ".libs" && rm -f "libf90.la" && ln -s "../libf90.la" "libf90.la" ) make[6]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/src/binding/f90' make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/src/binding/f90' make[5]: Entering directory '/build/pnetcdf-1.10.0/build-shared/src/binding' make[5]: Nothing to be done for 'all-am'. make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/src/binding' make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/src/binding' Making all in packaging make[4]: Entering directory '/build/pnetcdf-1.10.0/build-shared/src/packaging' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/src/packaging' Making all in . make[4]: Entering directory '/build/pnetcdf-1.10.0/build-shared/src' make[4]: Nothing to be done for 'all-am'. make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/src' Making all in libs make[4]: Entering directory '/build/pnetcdf-1.10.0/build-shared/src/libs' /bin/bash ../../libtool --tag=CXX --mode=link /usr/bin/mpicxx -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -version-info 2:0:0 -Wl,-z,relro -Wl,--no-as-needed -lgfortran -Wl,--as-needed -g -o libpnetcdf.la -rpath /usr/lib/x86_64-linux-gnu ../dispatchers/libdispatchers.la ../drivers/common/libcommon.la ../drivers/ncmpio/libncmpio.la ../binding/cxx/libcxx.la ../binding/f77/libf77.la ../binding/f90/libf90.la libtool: link: (cd .libs/libpnetcdf.lax/libdispatchers.a && ar x "/build/pnetcdf-1.10.0/build-shared/src/libs/../dispatchers/.libs/libdispatchers.a") libtool: link: (cd .libs/libpnetcdf.lax/libcommon.a && ar x "/build/pnetcdf-1.10.0/build-shared/src/libs/../drivers/common/.libs/libcommon.a") libtool: link: (cd .libs/libpnetcdf.lax/libncmpio.a && ar x "/build/pnetcdf-1.10.0/build-shared/src/libs/../drivers/ncmpio/.libs/libncmpio.a") libtool: link: (cd .libs/libpnetcdf.lax/libcxx.a && ar x "/build/pnetcdf-1.10.0/build-shared/src/libs/../binding/cxx/.libs/libcxx.a") libtool: link: (cd .libs/libpnetcdf.lax/libf77.a && ar x "/build/pnetcdf-1.10.0/build-shared/src/libs/../binding/f77/.libs/libf77.a") libtool: link: (cd .libs/libpnetcdf.lax/libf90.a && ar x "/build/pnetcdf-1.10.0/build-shared/src/libs/../binding/f90/.libs/libf90.a") libtool: link: ar cru .libs/libpnetcdf.a .libs/libpnetcdf.lax/libdispatchers.a/attr_getput.o .libs/libpnetcdf.lax/libdispatchers.a/attribute.o .libs/libpnetcdf.lax/libdispatchers.a/dimension.o .libs/libpnetcdf.lax/libdispatchers.a/error_codes.o .libs/libpnetcdf.lax/libdispatchers.a/file.o .libs/libpnetcdf.lax/libdispatchers.a/lib_version.o .libs/libpnetcdf.lax/libdispatchers.a/var_getput.o .libs/libpnetcdf.lax/libdispatchers.a/variable.o .libs/libpnetcdf.lax/libcommon.a/check_name.o .libs/libpnetcdf.lax/libcommon.a/convert_swap.o .libs/libpnetcdf.lax/libcommon.a/create_imaptype.o .libs/libpnetcdf.lax/libcommon.a/dtype_decode.o .libs/libpnetcdf.lax/libcommon.a/error_mpi2nc.o .libs/libpnetcdf.lax/libcommon.a/error_posix2nc.o 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.libs/libpnetcdf.lax/libncmpio.a/ncmpio_i_getput.o .libs/libpnetcdf.lax/libncmpio.a/ncmpio_i_varn.o .libs/libpnetcdf.lax/libncmpio.a/ncmpio_open.o .libs/libpnetcdf.lax/libncmpio.a/ncmpio_sync.o .libs/libpnetcdf.lax/libncmpio.a/ncmpio_util.o .libs/libpnetcdf.lax/libncmpio.a/ncmpio_var.o .libs/libpnetcdf.lax/libncmpio.a/ncmpio_vard.o .libs/libpnetcdf.lax/libncmpio.a/ncmpio_varn.o .libs/libpnetcdf.lax/libncmpio.a/ncmpio_wait.o .libs/libpnetcdf.lax/libcxx.a/ncmpiAtt.o .libs/libpnetcdf.lax/libcxx.a/ncmpiByte.o .libs/libpnetcdf.lax/libcxx.a/ncmpiChar.o .libs/libpnetcdf.lax/libcxx.a/ncmpiCheck.o .libs/libpnetcdf.lax/libcxx.a/ncmpiCompoundType.o .libs/libpnetcdf.lax/libcxx.a/ncmpiDim.o .libs/libpnetcdf.lax/libcxx.a/ncmpiDouble.o .libs/libpnetcdf.lax/libcxx.a/ncmpiEnumType.o .libs/libpnetcdf.lax/libcxx.a/ncmpiException.o .libs/libpnetcdf.lax/libcxx.a/ncmpiFile.o .libs/libpnetcdf.lax/libcxx.a/ncmpiFloat.o .libs/libpnetcdf.lax/libcxx.a/ncmpiGroup.o .libs/libpnetcdf.lax/libcxx.a/ncmpiGroupAtt.o .libs/libpnetcdf.lax/libcxx.a/ncmpiInt.o .libs/libpnetcdf.lax/libcxx.a/ncmpiInt64.o .libs/libpnetcdf.lax/libcxx.a/ncmpiOpaqueType.o .libs/libpnetcdf.lax/libcxx.a/ncmpiShort.o .libs/libpnetcdf.lax/libcxx.a/ncmpiType.o .libs/libpnetcdf.lax/libcxx.a/ncmpiUbyte.o .libs/libpnetcdf.lax/libcxx.a/ncmpiUint.o .libs/libpnetcdf.lax/libcxx.a/ncmpiUint64.o .libs/libpnetcdf.lax/libcxx.a/ncmpiUshort.o .libs/libpnetcdf.lax/libcxx.a/ncmpiVar.o .libs/libpnetcdf.lax/libcxx.a/ncmpiVarAtt.o .libs/libpnetcdf.lax/libcxx.a/ncmpiVlenType.o .libs/libpnetcdf.lax/libcxx.a/ncmpi_notyet.o .libs/libpnetcdf.lax/libf77.a/allf.o .libs/libpnetcdf.lax/libf77.a/inq_libversf.o .libs/libpnetcdf.lax/libf77.a/issyserrf.o .libs/libpnetcdf.lax/libf77.a/strerrnof.o .libs/libpnetcdf.lax/libf77.a/strerrorf.o .libs/libpnetcdf.lax/libf77.a/xinq_libversf.o .libs/libpnetcdf.lax/libf77.a/xstrerrnof.o .libs/libpnetcdf.lax/libf77.a/xstrerrorf.o .libs/libpnetcdf.lax/libf90.a/pnetcdf.o ar: `u' modifier ignored since `D' is the default (see `U') libtool: link: ranlib .libs/libpnetcdf.a libtool: link: rm -fr .libs/libpnetcdf.lax libtool: link: ( cd ".libs" && rm -f "libpnetcdf.la" && ln -s "../libpnetcdf.la" "libpnetcdf.la" ) make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/src/libs' Making all in utils make[4]: Entering directory '/build/pnetcdf-1.10.0/build-shared/src/utils' Making all in ncmpigen make[5]: Entering directory '/build/pnetcdf-1.10.0/build-shared/src/utils/ncmpigen' /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/utils/ncmpigen -I../../../src/include -I../../../../src/include -I../../../src/include -I../../../src/drivers/ncmpio -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c -o main.o ../../../../src/utils/ncmpigen/main.c /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/utils/ncmpigen -I../../../src/include -I../../../../src/include -I../../../src/include -I../../../src/drivers/ncmpio -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c -o load.o ../../../../src/utils/ncmpigen/load.c /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/utils/ncmpigen -I../../../src/include -I../../../../src/include -I../../../src/include -I../../../src/drivers/ncmpio -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c -o escapes.o ../../../../src/utils/ncmpigen/escapes.c /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/utils/ncmpigen -I../../../src/include -I../../../../src/include -I../../../src/include -I../../../src/drivers/ncmpio -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c -o getfill.o ../../../../src/utils/ncmpigen/getfill.c /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/utils/ncmpigen -I../../../src/include -I../../../../src/include -I../../../src/include -I../../../src/drivers/ncmpio -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c -o init.o ../../../../src/utils/ncmpigen/init.c /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/utils/ncmpigen -I../../../src/include -I../../../../src/include -I../../../src/include -I../../../src/drivers/ncmpio -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c -o genlib.o ../../../../src/utils/ncmpigen/genlib.c /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/utils/ncmpigen -I../../../src/include -I../../../../src/include -I../../../src/include -I../../../src/drivers/ncmpio -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c -o ncmpigentab.o ../../../../src/utils/ncmpigen/ncmpigentab.c /bin/bash ../../../libtool --tag=CC --mode=link /usr/bin/mpicc -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -Wl,-z,relro -Wl,--no-as-needed -lgfortran -Wl,--as-needed -g -o ncmpigen main.o load.o escapes.o getfill.o init.o genlib.o ncmpigentab.o ../../../src/libs/libpnetcdf.la libtool: link: /usr/bin/mpicc -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -Wl,-z -Wl,relro -Wl,--no-as-needed -Wl,--as-needed -g -o ncmpigen main.o load.o escapes.o getfill.o init.o genlib.o ncmpigentab.o -lgfortran ../../../src/libs/.libs/libpnetcdf.a make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/src/utils/ncmpigen' Making all in ncmpidump make[5]: Entering directory '/build/pnetcdf-1.10.0/build-shared/src/utils/ncmpidump' /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/utils/ncmpidump -I../../../src/include -I../../../../src/include -I../../../src/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c -o ncmpidump.o ../../../../src/utils/ncmpidump/ncmpidump.c /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/utils/ncmpidump -I../../../src/include -I../../../../src/include -I../../../src/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c -o vardata.o ../../../../src/utils/ncmpidump/vardata.c /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/utils/ncmpidump -I../../../src/include -I../../../../src/include -I../../../src/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c -o dumplib.o ../../../../src/utils/ncmpidump/dumplib.c /bin/bash ../../../libtool --tag=CC --mode=link /usr/bin/mpicc -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -Wl,-z,relro -Wl,--no-as-needed -lgfortran -Wl,--as-needed -g -o ncmpidump ncmpidump.o vardata.o dumplib.o ../../../src/libs/libpnetcdf.la libtool: link: /usr/bin/mpicc -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -Wl,-z -Wl,relro -Wl,--no-as-needed -Wl,--as-needed -g -o ncmpidump ncmpidump.o vardata.o dumplib.o -lgfortran ../../../src/libs/.libs/libpnetcdf.a make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/src/utils/ncmpidump' Making all in ncmpidiff make[5]: Entering directory '/build/pnetcdf-1.10.0/build-shared/src/utils/ncmpidiff' /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../../src/utils/ncmpidiff -I../../../src/include -I../../../../src/include -I../../../src/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c -o ncmpidiff.o ../../../../src/utils/ncmpidiff/ncmpidiff.c /bin/bash ../../../libtool --tag=CC --mode=link /usr/bin/mpicc -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -Wl,-z,relro -Wl,--no-as-needed -lgfortran -Wl,--as-needed -g -o ncmpidiff ncmpidiff.o ../../../src/libs/libpnetcdf.la libtool: link: /usr/bin/mpicc -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -Wl,-z -Wl,relro -Wl,--no-as-needed -Wl,--as-needed -g -o ncmpidiff ncmpidiff.o -lgfortran ../../../src/libs/.libs/libpnetcdf.a make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/src/utils/ncmpidiff' Making all in ncvalidator make[5]: Entering directory '/build/pnetcdf-1.10.0/build-shared/src/utils/ncvalidator' /usr/bin/gcc -o ncvalidator ../../../../src/utils/ncvalidator/ncvalidator.c make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/src/utils/ncvalidator' Making all in pnetcdf_version make[5]: Entering directory '/build/pnetcdf-1.10.0/build-shared/src/utils/pnetcdf_version' /usr/bin/gcc -DMPICC="\"/usr/bin/mpicc\"" -DCFLAGS="\"-g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g\"" -DCONFIGURE_ARGS_CLEAN="\"--build=x86_64-linux-gnu --prefix=/usr --includedir=/usr/include --mandir=/usr/share/man --infodir=/usr/share/info --sysconfdir=/etc --localstatedir=/var --disable-silent-rules --libdir=/usr/lib/x86_64-linux-gnu --libexecdir=/usr/lib/x86_64-linux-gnu --disable-maintainer-mode --disable-dependency-tracking CFLAGS= -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g CXXFLAGS=-g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g FCFLAGS=-g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -fPIC -g FFLAGS=-g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -fPIC -g LDFLAGS=-Wl,-z,relro -Wl,--no-as-needed -lgfortran -Wl,--as-needed -g OMPI_CFLAGS= -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g OMPI_CXXFLAGS=-g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g OMPI_FCFLAGS=-g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -fPIC -g OMPI_FFLAGS=-g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -fPIC -g OMPI_LDFLAGS=-Wl,-z,relro -Wl,--no-as-needed -lgfortran -Wl,--as-needed -g OMPI_FC=gfortran-8 FC=gfortran-8\"" -DPNETCDF_VERSION="\"1.10.0\"" -DMPICXX="\"/usr/bin/mpicxx\"" -DCXXFLAGS="\"-g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g\"" -DMPIF77="\"/usr/bin/mpif77\"" -DFFLAGS="\"-g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -fPIC -g\"" -DMPIF90="\"/usr/bin/mpif90\"" -DFCFLAGS="\"-g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -fPIC -g\"" -o pnetcdf_version ../../../../src/utils/pnetcdf_version/pnetcdf_version.c make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/src/utils/pnetcdf_version' Making all in ncoffsets make[5]: Entering directory '/build/pnetcdf-1.10.0/build-shared/src/utils/ncoffsets' /usr/bin/gcc -o ncoffsets ../../../../src/utils/ncoffsets/ncoffsets.c make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/src/utils/ncoffsets' make[5]: Entering directory '/build/pnetcdf-1.10.0/build-shared/src/utils' make[5]: Nothing to be done for 'all-am'. make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/src/utils' make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/src/utils' make[3]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/src' Making all in man make[3]: Entering directory '/build/pnetcdf-1.10.0/build-shared/man' m4 -DPNETCDF -DAPI=C -DPNETCDF_VERSION=1.10.0 ../../man/pnetcdf.m4 > pnetcdf.3 || rm -f pnetcdf.3 m4 -DPNETCDF -DAPI=F -DPNETCDF_VERSION=1.10.0 ../../man/pnetcdf.m4 > pnetcdf_f77.3 || rm -f pnetcdf_f77.3 m4 -DPNETCDF -DPNETCDF_VERSION=1.10.0 ../../man/pnetcdf_f90.m4 > pnetcdf_f90.3 || rm -f pnetcdf_f90.3 make[3]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/man' Making all in examples make[3]: Entering directory '/build/pnetcdf-1.10.0/build-shared/examples' Making all in C make[4]: Entering directory '/build/pnetcdf-1.10.0/build-shared/examples/C' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/examples/C' Making all in tutorial make[4]: Entering directory '/build/pnetcdf-1.10.0/build-shared/examples/tutorial' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/examples/tutorial' Making all in CXX make[4]: Entering directory '/build/pnetcdf-1.10.0/build-shared/examples/CXX' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/examples/CXX' Making all in F77 make[4]: Entering directory '/build/pnetcdf-1.10.0/build-shared/examples/F77' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/examples/F77' make[4]: Entering directory '/build/pnetcdf-1.10.0/build-shared/examples' make[4]: Nothing to be done for 'all-am'. make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/examples' make[3]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/examples' Making all in benchmarks make[3]: Entering directory '/build/pnetcdf-1.10.0/build-shared/benchmarks' Making all in C make[4]: Entering directory '/build/pnetcdf-1.10.0/build-shared/benchmarks/C' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/benchmarks/C' make[4]: Entering directory '/build/pnetcdf-1.10.0/build-shared/benchmarks' make[4]: Nothing to be done for 'all-am'. make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/benchmarks' make[3]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/benchmarks' Making all in test make[3]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test' Making all in common make[4]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test/common' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test/common' Making all in C make[4]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test/C' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test/C' Making all in fandc make[4]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test/fandc' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test/fandc' Making all in nc_test make[4]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test/nc_test' m4 -DPNETCDF -I../../../m4 ../../../test/nc_test/tests.h.m4 > tests.h /usr/bin/make all-am make[5]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test/nc_test' make[5]: Nothing to be done for 'all-am'. make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test/nc_test' make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test/nc_test' Making all in cdf_format make[4]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test/cdf_format' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test/cdf_format' Making all in header make[4]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test/header' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test/header' Making all in testcases make[4]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test/testcases' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test/testcases' Making all in nonblocking make[4]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test/nonblocking' m4 -DPNETCDF -I../../../m4 ../../../test/nonblocking/bput_varn.m4 >bput_varn.c m4 -DPNETCDF -I../../../m4 ../../../test/nonblocking/column_wise.m4 >column_wise.c /usr/bin/make all-am make[5]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test/nonblocking' make[5]: Nothing to be done for 'all-am'. make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test/nonblocking' make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test/nonblocking' Making all in largefile make[4]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test/largefile' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test/largefile' Making all in CXX make[4]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test/CXX' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test/CXX' Making all in nf_test make[4]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test/nf_test' make[4]: Nothing to be done for 'all'. make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test/nf_test' make[4]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test' make[4]: Nothing to be done for 'all-am'. make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test' make[3]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test' make[3]: Entering directory '/build/pnetcdf-1.10.0/build-shared' make[3]: Nothing to be done for 'all-am'. make[3]: Leaving directory '/build/pnetcdf-1.10.0/build-shared' make[2]: Leaving directory '/build/pnetcdf-1.10.0/build-shared' ( cd build-shared/src/libs && \ mpicxx -shared -o libpnetcdf.so.0d -Wl,--soname -Wl,libpnetcdf.so.0d -Wl,-z,relro -Wl,--no-as-needed -lgfortran -Wl,--as-needed \ -Wl,--whole-archive .libs/libpnetcdf.a -Wl,--no-whole-archive ) chrpath -d ./build-shared/src/libs/libpnetcdf.so.0d for d in ncmpidiff ncmpidump ncmpigen ncoffsets ncvalidator pnetcdf_version ; do \ chrpath -d ./build-shared/src/utils/$d/$d ; \ chrpath -d ./build-static/src/utils/$d/$d ; done make[1]: Leaving directory '/build/pnetcdf-1.10.0' debian/rules override_dh_auto_test make[1]: Entering directory '/build/pnetcdf-1.10.0' ( cd build-shared/test && /usr/bin/make check ) make[2]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test' Making check in common make[3]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test/common' /usr/bin/make libtestutils.la libtestutilsf.la make[4]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test/common' /bin/bash ../../libtool --tag=CC --mode=compile /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../test/common -I../../src/include -I../../../src/include -I../../src/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c -o testutils.lo ../../../test/common/testutils.c libtool: compile: /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../test/common -I../../src/include -I../../../src/include -I../../src/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c ../../../test/common/testutils.c -o testutils.o /bin/bash ../../libtool --tag=FC --mode=compile /usr/bin/mpif90 -DHAVE_CONFIG_H -I. -I../../../test/common -I../../src/include -I../../../src/include -I../../src/include -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_DECL_MPI_OFFSET -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -fPIC -g -c -o testutilsf.lo ../../../test/common/testutilsf.F90 libtool: compile: /usr/bin/mpif90 -DHAVE_CONFIG_H -I. -I../../../test/common -I../../src/include -I../../../src/include -I../../src/include -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_DECL_MPI_OFFSET -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -fPIC -g -c ../../../test/common/testutilsf.F90 -o testutilsf.o /bin/bash ../../libtool --tag=FC --mode=link /usr/bin/mpif90 -DHAVE_DECL_MPI_OFFSET -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -fPIC -g -Wl,-z,relro -Wl,--no-as-needed -lgfortran -Wl,--as-needed -g -o libtestutilsf.la testutilsf.lo libtool: link: ar cru .libs/libtestutilsf.a testutilsf.o ar: `u' modifier ignored since `D' is the default (see `U') libtool: link: ranlib .libs/libtestutilsf.a libtool: link: ( cd ".libs" && rm -f "libtestutilsf.la" && ln -s "../libtestutilsf.la" "libtestutilsf.la" ) /bin/bash ../../libtool --tag=CC --mode=link /usr/bin/mpicc -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -Wl,-z,relro -Wl,--no-as-needed -lgfortran -Wl,--as-needed -g -o libtestutils.la testutils.lo libtestutilsf.la libtool: link: (cd .libs/libtestutils.lax/libtestutilsf.a && ar x "/build/pnetcdf-1.10.0/build-shared/test/common/./.libs/libtestutilsf.a") libtool: link: ar cru .libs/libtestutils.a testutils.o .libs/libtestutils.lax/libtestutilsf.a/testutilsf.o ar: `u' modifier ignored since `D' is the default (see `U') libtool: link: ranlib .libs/libtestutils.a libtool: link: rm -fr .libs/libtestutils.lax libtool: link: ( cd ".libs" && rm -f "libtestutils.la" && ln -s "../libtestutils.la" "libtestutils.la" ) make[4]: 'libtestutilsf.la' is up to date. make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test/common' make[3]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test/common' Making check in C make[3]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test/C' /usr/bin/make pres_temp_4D_wr pres_temp_4D_rd make[4]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test/C' /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../test/C -I../../src/include -I../../../src/include -I../../../test/C/../common -I../../src/include -DHAVE_DECL_MPI_OFFSET -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c -o pres_temp_4D_wr.o ../../../test/C/pres_temp_4D_wr.c /bin/bash ../../libtool --tag=CC --mode=link /usr/bin/mpicc -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -Wl,-z,relro -Wl,--no-as-needed -lgfortran -Wl,--as-needed -g -o pres_temp_4D_wr pres_temp_4D_wr.o ../../src/libs/libpnetcdf.la ../common/libtestutils.la libtool: link: /usr/bin/mpicc -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -Wl,-z -Wl,relro -Wl,--no-as-needed -Wl,--as-needed -g -o pres_temp_4D_wr pres_temp_4D_wr.o ../../src/libs/.libs/libpnetcdf.a ../common/.libs/libtestutils.a -lgfortran /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../test/C -I../../src/include -I../../../src/include -I../../../test/C/../common -I../../src/include -DHAVE_DECL_MPI_OFFSET -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c -o pres_temp_4D_rd.o ../../../test/C/pres_temp_4D_rd.c /bin/bash ../../libtool --tag=CC --mode=link /usr/bin/mpicc -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -Wl,-z,relro -Wl,--no-as-needed -lgfortran -Wl,--as-needed -g -o pres_temp_4D_rd pres_temp_4D_rd.o ../../src/libs/libpnetcdf.la ../common/libtestutils.la libtool: link: /usr/bin/mpicc -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -Wl,-z -Wl,relro -Wl,--no-as-needed -Wl,--as-needed -g -o pres_temp_4D_rd pres_temp_4D_rd.o ../../src/libs/.libs/libpnetcdf.a ../common/.libs/libtestutils.a -lgfortran make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test/C' /usr/bin/make check-TESTS make[4]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test/C' make[5]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test/C' PASS: pres_temp_4D_wr PASS: pres_temp_4D_rd ============================================================================ Testsuite summary for parallel-netcdf 1.10.0 ============================================================================ # TOTAL: 2 # PASS: 2 # SKIP: 0 # XFAIL: 0 # FAIL: 0 # XPASS: 0 # ERROR: 0 ============================================================================ make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test/C' make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test/C' make[3]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test/C' Making check in fandc make[3]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test/fandc' /usr/bin/make pnctest csnap pnf_test pnctestf fixedform freeform make[4]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test/fandc' /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../test/fandc -I../../src/include -I../../../src/include -I../../../test/fandc/../common -I../../src/include -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_DECL_MPI_OFFSET -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c -o pnctest.o ../../../test/fandc/pnctest.c /bin/bash ../../libtool --tag=CC --mode=link /usr/bin/mpicc -DHAVE_DECL_MPI_OFFSET -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -Wl,-z,relro -Wl,--no-as-needed -lgfortran -Wl,--as-needed -g -o pnctest pnctest.o ../../src/libs/libpnetcdf.la ../common/libtestutils.la -lm libtool: link: /usr/bin/mpicc -DHAVE_DECL_MPI_OFFSET -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat 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-I../../../test/fandc/../common -I../../src/binding/f77 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -fPIC -g -c -o fixedform-fixedform.o `test -f 'fixedform.f90' || echo '../../../test/fandc/'`fixedform.f90 /bin/bash ../../libtool --tag=FC --mode=link /usr/bin/mpif90 -ffixed-form -I../../src/binding/f90 -I../../../test/fandc/../common -I../../src/binding/f77 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -fPIC -g -Wl,-z,relro -Wl,--no-as-needed -lgfortran -Wl,--as-needed -g -o fixedform fixedform-fixedform.o ../../src/libs/libpnetcdf.la ../common/libtestutils.la -lm libtool: link: /usr/bin/mpif90 -ffixed-form -I../../src/binding/f90 -I../../../test/fandc/../common -I../../src/binding/f77 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -fPIC -g -Wl,-z -Wl,relro -Wl,--no-as-needed -Wl,--as-needed -g -o fixedform fixedform-fixedform.o ../../src/libs/.libs/libpnetcdf.a ../common/.libs/libtestutils.a 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'/build/pnetcdf-1.10.0/build-shared/test/fandc' Making check in nc_test make[3]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test/nc_test' /usr/bin/make check-am make[4]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test/nc_test' /usr/bin/make t_nc tst_misc tst_norm tst_small tst_names tst_atts3 tst_atts tst_nofill nc_test make[5]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test/nc_test' /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../test/nc_test -I../../src/include -I../../../src/include -I../../../test/nc_test/../common -I../../src/include -DHAVE_DECL_MPI_OFFSET -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c -o t_nc.o ../../../test/nc_test/t_nc.c /bin/bash ../../libtool --tag=CC --mode=link /usr/bin/mpicc -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -Wl,-z,relro -Wl,--no-as-needed -lgfortran -Wl,--as-needed -g -o t_nc t_nc.o ../../src/libs/libpnetcdf.la ../common/libtestutils.la -lm libtool: link: /usr/bin/mpicc -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -Wl,-z -Wl,relro -Wl,--no-as-needed -Wl,--as-needed -g -o t_nc t_nc.o ../../src/libs/.libs/libpnetcdf.a ../common/.libs/libtestutils.a -lgfortran -lm /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../test/nc_test -I../../src/include -I../../../src/include -I../../../test/nc_test/../common -I../../src/include -DHAVE_DECL_MPI_OFFSET -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c -o tst_misc.o ../../../test/nc_test/tst_misc.c /bin/bash ../../libtool --tag=CC --mode=link /usr/bin/mpicc -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -Wl,-z,relro -Wl,--no-as-needed -lgfortran 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-Wl,--no-as-needed -lgfortran -Wl,--as-needed -g -o tst_names tst_names.o ../../src/libs/libpnetcdf.la ../common/libtestutils.la -lm libtool: link: /usr/bin/mpicc -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -Wl,-z -Wl,relro -Wl,--no-as-needed -Wl,--as-needed -g -o tst_names tst_names.o ../../src/libs/.libs/libpnetcdf.a ../common/.libs/libtestutils.a -lgfortran -lm /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../test/nc_test -I../../src/include -I../../../src/include -I../../../test/nc_test/../common -I../../src/include -DHAVE_DECL_MPI_OFFSET -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c -o tst_atts3.o ../../../test/nc_test/tst_atts3.c /bin/bash ../../libtool --tag=CC --mode=link /usr/bin/mpicc -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -Wl,-z,relro -Wl,--no-as-needed -lgfortran -Wl,--as-needed -g -o tst_atts3 tst_atts3.o ../../src/libs/libpnetcdf.la ../common/libtestutils.la -lm libtool: link: /usr/bin/mpicc -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -Wl,-z -Wl,relro -Wl,--no-as-needed -Wl,--as-needed -g -o tst_atts3 tst_atts3.o ../../src/libs/.libs/libpnetcdf.a ../common/.libs/libtestutils.a -lgfortran -lm /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../test/nc_test -I../../src/include -I../../../src/include -I../../../test/nc_test/../common -I../../src/include -DHAVE_DECL_MPI_OFFSET -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c -o tst_atts.o ../../../test/nc_test/tst_atts.c /bin/bash ../../libtool --tag=CC --mode=link /usr/bin/mpicc -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -Wl,-z,relro -Wl,--no-as-needed -lgfortran -Wl,--as-needed -g -o tst_atts tst_atts.o ../../src/libs/libpnetcdf.la ../common/libtestutils.la -lm libtool: link: /usr/bin/mpicc -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -Wl,-z -Wl,relro -Wl,--no-as-needed -Wl,--as-needed -g -o tst_atts tst_atts.o ../../src/libs/.libs/libpnetcdf.a ../common/.libs/libtestutils.a -lgfortran -lm /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../test/nc_test -I../../src/include -I../../../src/include -I../../../test/nc_test/../common -I../../src/include -DHAVE_DECL_MPI_OFFSET -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c -o tst_nofill.o ../../../test/nc_test/tst_nofill.c ../../../test/nc_test/tst_nofill.c: In function 'main': ../../../test/nc_test/tst_nofill.c:373:31: warning: '.fill' directive writing 5 bytes into a region of size between 1 and 256 [-Wformat-overflow=] sprintf(fill_filename, "%s.fill", filename); ^~~~~ In file included from /usr/include/stdio.h:873, from ../../../test/nc_test/tst_nofill.c:15: /usr/include/x86_64-linux-gnu/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 6 and 261 bytes into a destination of size 256 return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __bos (__s), __fmt, __va_arg_pack ()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ../../../test/nc_test/tst_nofill.c:374:33: warning: '.nofill' directive writing 7 bytes into a region of size between 1 and 256 [-Wformat-overflow=] sprintf(nofill_filename, "%s.nofill", filename); ^~~~~~~ In file included from /usr/include/stdio.h:873, from ../../../test/nc_test/tst_nofill.c:15: /usr/include/x86_64-linux-gnu/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 8 and 263 bytes into a destination of size 256 return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __bos (__s), __fmt, __va_arg_pack ()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /bin/bash ../../libtool --tag=CC --mode=link /usr/bin/mpicc -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -Wl,-z,relro -Wl,--no-as-needed -lgfortran -Wl,--as-needed -g -o tst_nofill tst_nofill.o ../../src/libs/libpnetcdf.la ../common/libtestutils.la -lm libtool: link: /usr/bin/mpicc -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -Wl,-z -Wl,relro -Wl,--no-as-needed -Wl,--as-needed -g -o tst_nofill tst_nofill.o ../../src/libs/.libs/libpnetcdf.a ../common/.libs/libtestutils.a -lgfortran -lm /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../test/nc_test -I../../src/include -I../../../src/include -I../../../test/nc_test/../common -I../../src/include -DHAVE_DECL_MPI_OFFSET -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c -o nc_test.o ../../../test/nc_test/nc_test.c /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../test/nc_test -I../../src/include -I../../../src/include -I../../../test/nc_test/../common -I../../src/include -DHAVE_DECL_MPI_OFFSET -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c -o error.o ../../../test/nc_test/error.c /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../test/nc_test -I../../src/include -I../../../src/include -I../../../test/nc_test/../common -I../../src/include -DHAVE_DECL_MPI_OFFSET -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c -o util.o ../../../test/nc_test/util.c m4 -DPNETCDF -I../../../m4 ../../../test/nc_test/test_get.m4 > test_get.c /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../test/nc_test -I../../src/include -I../../../src/include -I../../../test/nc_test/../common -I../../src/include -DHAVE_DECL_MPI_OFFSET -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c -o test_get.o test_get.c m4 -DPNETCDF -I../../../m4 ../../../test/nc_test/test_put.m4 > test_put.c /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../test/nc_test -I../../src/include -I../../../src/include -I../../../test/nc_test/../common -I../../src/include -DHAVE_DECL_MPI_OFFSET -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c -o test_put.o test_put.c m4 -DPNETCDF -I../../../m4 ../../../test/nc_test/test_iget.m4 > test_iget.c /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../test/nc_test -I../../src/include -I../../../src/include -I../../../test/nc_test/../common -I../../src/include -DHAVE_DECL_MPI_OFFSET -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c -o test_iget.o test_iget.c m4 -DPNETCDF -I../../../m4 ../../../test/nc_test/test_iput.m4 > test_iput.c /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../test/nc_test -I../../src/include -I../../../src/include -I../../../test/nc_test/../common -I../../src/include -DHAVE_DECL_MPI_OFFSET -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c -o test_iput.o test_iput.c m4 -DPNETCDF -I../../../m4 ../../../test/nc_test/test_read.m4 > test_read.c /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../test/nc_test -I../../src/include -I../../../src/include -I../../../test/nc_test/../common -I../../src/include -DHAVE_DECL_MPI_OFFSET -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c -o test_read.o test_read.c m4 -DPNETCDF -I../../../m4 ../../../test/nc_test/test_write.m4 > test_write.c /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../test/nc_test -I../../src/include -I../../../src/include -I../../../test/nc_test/../common -I../../src/include -DHAVE_DECL_MPI_OFFSET -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c -o test_write.o test_write.c /bin/bash ../../libtool --tag=CC --mode=link /usr/bin/mpicc -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -Wl,-z,relro -Wl,--no-as-needed -lgfortran -Wl,--as-needed -g -o nc_test nc_test.o error.o util.o test_get.o test_put.o test_iget.o test_iput.o test_read.o test_write.o ../../src/libs/libpnetcdf.la ../common/libtestutils.la -lm libtool: link: /usr/bin/mpicc -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -Wl,-z -Wl,relro -Wl,--no-as-needed -Wl,--as-needed -g -o nc_test nc_test.o error.o util.o test_get.o test_put.o test_iget.o test_iput.o test_read.o test_write.o ../../src/libs/.libs/libpnetcdf.a ../common/.libs/libtestutils.a -lgfortran -lm make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test/nc_test' /usr/bin/make check-TESTS make[5]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test/nc_test' make[6]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test/nc_test' PASS: t_nc PASS: tst_misc PASS: tst_norm PASS: tst_small PASS: tst_names PASS: tst_atts3 PASS: tst_atts PASS: seq_runs.sh ============================================================================ Testsuite summary for parallel-netcdf 1.10.0 ============================================================================ # TOTAL: 8 # PASS: 8 # SKIP: 0 # XFAIL: 0 # FAIL: 0 # XPASS: 0 # ERROR: 0 ============================================================================ make[6]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test/nc_test' make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test/nc_test' make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test/nc_test' make[3]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test/nc_test' Making check in cdf_format make[3]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test/cdf_format' /usr/bin/make test_inq_format cdf_type dim_cdf12 tst_open_cdf5 tst_corrupt make[4]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test/cdf_format' /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../test/cdf_format -I../../src/include -I../../../src/include -I../../../test/cdf_format/../common -I../../src/include -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_DECL_MPI_OFFSET -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c -o test_inq_format.o ../../../test/cdf_format/test_inq_format.c ../../../test/cdf_format/test_inq_format.c: In function 'main': ../../../test/cdf_format/test_inq_format.c:41:25: warning: '/test_cdf1.nc' directive writing 13 bytes into a region of size between 1 and 256 [-Wformat-overflow=] sprintf(filename,"%s/test_cdf1.nc",dir_name); ^~~~~~~~~~~~~ In file included from /usr/include/stdio.h:873, from ../../../test/cdf_format/test_inq_format.c:9: /usr/include/x86_64-linux-gnu/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 14 and 269 bytes into a destination of size 256 return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __bos (__s), __fmt, __va_arg_pack ()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ../../../test/cdf_format/test_inq_format.c:66:25: warning: '/test_cdf2.nc' directive writing 13 bytes into a region of size between 1 and 256 [-Wformat-overflow=] sprintf(filename,"%s/test_cdf2.nc",dir_name); ^~~~~~~~~~~~~ In file included from /usr/include/stdio.h:873, from ../../../test/cdf_format/test_inq_format.c:9: /usr/include/x86_64-linux-gnu/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 14 and 269 bytes into a destination of size 256 return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __bos (__s), __fmt, __va_arg_pack ()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ../../../test/cdf_format/test_inq_format.c:88:25: warning: '/test_cdf5.nc' directive writing 13 bytes into a region of size between 1 and 256 [-Wformat-overflow=] sprintf(filename,"%s/test_cdf5.nc",dir_name); ^~~~~~~~~~~~~ In file included from /usr/include/stdio.h:873, from ../../../test/cdf_format/test_inq_format.c:9: /usr/include/x86_64-linux-gnu/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 14 and 269 bytes into a destination of size 256 return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __bos (__s), __fmt, __va_arg_pack ()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /bin/bash ../../libtool --tag=CC --mode=link /usr/bin/mpicc -DHAVE_DECL_MPI_OFFSET -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -Wl,-z,relro -Wl,--no-as-needed -lgfortran -Wl,--as-needed -g -o test_inq_format test_inq_format.o ../../src/libs/libpnetcdf.la ../common/libtestutils.la libtool: link: /usr/bin/mpicc -DHAVE_DECL_MPI_OFFSET -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -Wl,-z -Wl,relro -Wl,--no-as-needed -Wl,--as-needed -g -o test_inq_format test_inq_format.o ../../src/libs/.libs/libpnetcdf.a ../common/.libs/libtestutils.a -lgfortran /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../test/cdf_format -I../../src/include -I../../../src/include -I../../../test/cdf_format/../common -I../../src/include -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_DECL_MPI_OFFSET -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c -o cdf_type.o ../../../test/cdf_format/cdf_type.c /bin/bash ../../libtool --tag=CC --mode=link /usr/bin/mpicc -DHAVE_DECL_MPI_OFFSET -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -Wl,-z,relro -Wl,--no-as-needed -lgfortran -Wl,--as-needed -g -o cdf_type cdf_type.o ../../src/libs/libpnetcdf.la ../common/libtestutils.la libtool: link: /usr/bin/mpicc -DHAVE_DECL_MPI_OFFSET -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -Wl,-z -Wl,relro -Wl,--no-as-needed -Wl,--as-needed -g -o cdf_type cdf_type.o ../../src/libs/.libs/libpnetcdf.a ../common/.libs/libtestutils.a -lgfortran /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../test/cdf_format -I../../src/include -I../../../src/include -I../../../test/cdf_format/../common -I../../src/include -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_DECL_MPI_OFFSET -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c -o dim_cdf12.o ../../../test/cdf_format/dim_cdf12.c /bin/bash ../../libtool --tag=CC --mode=link /usr/bin/mpicc -DHAVE_DECL_MPI_OFFSET -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -Wl,-z,relro -Wl,--no-as-needed -lgfortran -Wl,--as-needed -g -o dim_cdf12 dim_cdf12.o ../../src/libs/libpnetcdf.la ../common/libtestutils.la libtool: link: /usr/bin/mpicc -DHAVE_DECL_MPI_OFFSET -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -Wl,-z -Wl,relro -Wl,--no-as-needed -Wl,--as-needed -g -o dim_cdf12 dim_cdf12.o ../../src/libs/.libs/libpnetcdf.a ../common/.libs/libtestutils.a -lgfortran /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../test/cdf_format -I../../src/include -I../../../src/include -I../../../test/cdf_format/../common -I../../src/include -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_DECL_MPI_OFFSET -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c -o tst_open_cdf5.o ../../../test/cdf_format/tst_open_cdf5.c /bin/bash ../../libtool --tag=CC --mode=link /usr/bin/mpicc -DHAVE_DECL_MPI_OFFSET -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -Wl,-z,relro -Wl,--no-as-needed -lgfortran -Wl,--as-needed -g -o tst_open_cdf5 tst_open_cdf5.o ../../src/libs/libpnetcdf.la ../common/libtestutils.la libtool: link: /usr/bin/mpicc -DHAVE_DECL_MPI_OFFSET -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -Wl,-z -Wl,relro -Wl,--no-as-needed -Wl,--as-needed -g -o tst_open_cdf5 tst_open_cdf5.o ../../src/libs/.libs/libpnetcdf.a ../common/.libs/libtestutils.a -lgfortran /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../test/cdf_format -I../../src/include -I../../../src/include -I../../../test/cdf_format/../common -I../../src/include -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_DECL_MPI_OFFSET -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c -o tst_corrupt.o ../../../test/cdf_format/tst_corrupt.c ../../../test/cdf_format/tst_corrupt.c: In function 'main': ../../../test/cdf_format/tst_corrupt.c:70:33: warning: '__builtin___sprintf_chk' may write a terminating nul past the end of the destination [-Wformat-overflow=] sprintf(filename, "%s/%s", dirname, bad_xtype[i]); ^ In file included from /usr/include/stdio.h:873, from ../../../test/cdf_format/tst_corrupt.c:20: /usr/include/x86_64-linux-gnu/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output 2 or more bytes (assuming 513) into a destination of size 512 return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __bos (__s), __fmt, __va_arg_pack ()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ../../../test/cdf_format/tst_corrupt.c:86:33: warning: '__builtin___sprintf_chk' may write a terminating nul past the end of the destination [-Wformat-overflow=] sprintf(filename, "%s/%s", dirname, bad_ndims[i]); ^ In file included from /usr/include/stdio.h:873, from ../../../test/cdf_format/tst_corrupt.c:20: /usr/include/x86_64-linux-gnu/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output 2 or more bytes (assuming 513) into a destination of size 512 return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __bos (__s), __fmt, __va_arg_pack ()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ../../../test/cdf_format/tst_corrupt.c:102:33: warning: '__builtin___sprintf_chk' may write a terminating nul past the end of the destination [-Wformat-overflow=] sprintf(filename, "%s/%s", dirname, bad_dimid[i]); ^ In file included from /usr/include/stdio.h:873, from ../../../test/cdf_format/tst_corrupt.c:20: /usr/include/x86_64-linux-gnu/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output 2 or more bytes (assuming 513) into a destination of size 512 return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __bos (__s), __fmt, __va_arg_pack ()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ../../../test/cdf_format/tst_corrupt.c:118:33: warning: '__builtin___sprintf_chk' may write a terminating nul past the end of the destination [-Wformat-overflow=] sprintf(filename, "%s/%s", dirname, bad_nattrs[i]); ^ In file included from /usr/include/stdio.h:873, from ../../../test/cdf_format/tst_corrupt.c:20: /usr/include/x86_64-linux-gnu/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output 2 or more bytes (assuming 513) into a destination of size 512 return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __bos (__s), __fmt, __va_arg_pack ()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /bin/bash ../../libtool --tag=CC --mode=link /usr/bin/mpicc -DHAVE_DECL_MPI_OFFSET -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -Wl,-z,relro -Wl,--no-as-needed -lgfortran -Wl,--as-needed -g -o tst_corrupt tst_corrupt.o ../../src/libs/libpnetcdf.la ../common/libtestutils.la libtool: link: /usr/bin/mpicc -DHAVE_DECL_MPI_OFFSET -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -Wl,-z -Wl,relro -Wl,--no-as-needed -Wl,--as-needed -g -o tst_corrupt tst_corrupt.o ../../src/libs/.libs/libpnetcdf.a ../common/.libs/libtestutils.a -lgfortran make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test/cdf_format' /usr/bin/make check-TESTS make[4]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test/cdf_format' make[5]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test/cdf_format' PASS: cdf_type PASS: dim_cdf12 PASS: seq_runs.sh XFAIL: xfail_runs.sh ============================================================================ Testsuite summary for parallel-netcdf 1.10.0 ============================================================================ # TOTAL: 4 # PASS: 3 # SKIP: 0 # XFAIL: 1 # FAIL: 0 # XPASS: 0 # ERROR: 0 ============================================================================ make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test/cdf_format' make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test/cdf_format' make[3]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test/cdf_format' Making check in header make[3]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test/header' /usr/bin/make header_consistency make[4]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test/header' /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../test/header -I../../src/include -I../../../src/include -I../../../test/header/../common -I../../src/include -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_DECL_MPI_OFFSET -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c -o header_consistency.o ../../../test/header/header_consistency.c /bin/bash ../../libtool --tag=CC --mode=link /usr/bin/mpicc -DHAVE_DECL_MPI_OFFSET -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -Wl,-z,relro -Wl,--no-as-needed -lgfortran -Wl,--as-needed -g -o header_consistency header_consistency.o ../../src/libs/libpnetcdf.la ../common/libtestutils.la libtool: link: /usr/bin/mpicc -DHAVE_DECL_MPI_OFFSET -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -Wl,-z -Wl,relro -Wl,--no-as-needed -Wl,--as-needed -g -o header_consistency header_consistency.o ../../src/libs/.libs/libpnetcdf.a ../common/.libs/libtestutils.a -lgfortran make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test/header' make[3]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test/header' Making check in testcases make[3]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test/testcases' /usr/bin/make ncmpi_vars_null_stride vectors collective_error test_varm alignment_test flexible flexible2 flexible_varm nonblocking noclobber record inq_num_vars varn_int modes one_record inq_recsize test_vard test_vard_rec test_vard_multiple varn_contig ivarn check_striping add_var buftype_free last_large_var check_type test_erange scalar null_args tst_dimsizes mix_collectives large_var_cdf5 tst_max_var_dims tst_info tst_vars_fill tst_def_var_fill test_fillvalue varn_intf attrf buftype_freef put_parameter test_vardf put_all_kinds redef1 tst_vars_fill iput_all_kinds make[4]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test/testcases' 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-ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c -o tst_info.o ../../../test/testcases/tst_info.c /bin/bash ../../libtool --tag=CC --mode=link /usr/bin/mpicc -DHAVE_DECL_MPI_OFFSET -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -Wl,-z,relro -Wl,--no-as-needed -lgfortran -Wl,--as-needed -g -o tst_info tst_info.o ../../src/libs/libpnetcdf.la ../common/libtestutils.la -lm libtool: link: /usr/bin/mpicc -DHAVE_DECL_MPI_OFFSET -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -Wl,-z -Wl,relro -Wl,--no-as-needed -Wl,--as-needed -g -o tst_info tst_info.o ../../src/libs/.libs/libpnetcdf.a ../common/.libs/libtestutils.a -lgfortran -lm m4 -DPNETCDF -I../../../m4 ../../../test/testcases/tst_vars_fill.m4 >tst_vars_fill.c /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../test/testcases -I../../src/include -I../../../src/include -I../../../test/testcases/../common -I../../src/include -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_DECL_MPI_OFFSET -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c -o tst_vars_fill.o tst_vars_fill.c /bin/bash ../../libtool --tag=CC --mode=link /usr/bin/mpicc -DHAVE_DECL_MPI_OFFSET -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -Wl,-z,relro -Wl,--no-as-needed -lgfortran -Wl,--as-needed -g -o tst_vars_fill tst_vars_fill.o ../../src/libs/libpnetcdf.la ../common/libtestutils.la -lm libtool: link: /usr/bin/mpicc -DHAVE_DECL_MPI_OFFSET -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -Wl,-z -Wl,relro -Wl,--no-as-needed -Wl,--as-needed -g -o tst_vars_fill tst_vars_fill.o ../../src/libs/.libs/libpnetcdf.a ../common/.libs/libtestutils.a -lgfortran -lm /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../test/testcases -I../../src/include -I../../../src/include -I../../../test/testcases/../common -I../../src/include -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_DECL_MPI_OFFSET -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c -o tst_def_var_fill.o ../../../test/testcases/tst_def_var_fill.c /bin/bash ../../libtool --tag=CC --mode=link /usr/bin/mpicc -DHAVE_DECL_MPI_OFFSET -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -Wl,-z,relro -Wl,--no-as-needed -lgfortran -Wl,--as-needed -g -o tst_def_var_fill tst_def_var_fill.o ../../src/libs/libpnetcdf.la ../common/libtestutils.la -lm libtool: link: /usr/bin/mpicc -DHAVE_DECL_MPI_OFFSET -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -Wl,-z -Wl,relro -Wl,--no-as-needed -Wl,--as-needed -g -o tst_def_var_fill tst_def_var_fill.o ../../src/libs/.libs/libpnetcdf.a ../common/.libs/libtestutils.a -lgfortran -lm /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../test/testcases -I../../src/include -I../../../src/include -I../../../test/testcases/../common -I../../src/include -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_DECL_MPI_OFFSET -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c -o test_fillvalue.o ../../../test/testcases/test_fillvalue.c /bin/bash ../../libtool --tag=CC --mode=link /usr/bin/mpicc -DHAVE_DECL_MPI_OFFSET -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -Wl,-z,relro -Wl,--no-as-needed -lgfortran -Wl,--as-needed -g -o test_fillvalue test_fillvalue.o ../../src/libs/libpnetcdf.la ../common/libtestutils.la -lm libtool: link: /usr/bin/mpicc -DHAVE_DECL_MPI_OFFSET -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat 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-ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -fPIC -g -c -o buftype_freef.o ../../../test/testcases/buftype_freef.f /bin/bash ../../libtool --tag=F77 --mode=link /usr/bin/mpif77 -I../../src/binding/f77 -DHAVE_DECL_MPI_OFFSET -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -fPIC -g -Wl,-z,relro -Wl,--no-as-needed -lgfortran -Wl,--as-needed -g -o buftype_freef buftype_freef.o ../../src/libs/libpnetcdf.la ../common/libtestutils.la -lm libtool: link: /usr/bin/mpif77 -I../../src/binding/f77 -DHAVE_DECL_MPI_OFFSET -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -fPIC -g -Wl,-z -Wl,relro -Wl,--no-as-needed -Wl,--as-needed -g -o buftype_freef buftype_freef.o ../../src/libs/.libs/libpnetcdf.a ../common/.libs/libtestutils.a -lgfortran -lm /usr/bin/mpif77 -I../../src/binding/f77 -DHAVE_DECL_MPI_OFFSET -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -fPIC -g -c -o put_parameter.o ../../../test/testcases/put_parameter.f /bin/bash ../../libtool --tag=F77 --mode=link /usr/bin/mpif77 -I../../src/binding/f77 -DHAVE_DECL_MPI_OFFSET -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -fPIC -g -Wl,-z,relro -Wl,--no-as-needed -lgfortran -Wl,--as-needed -g -o put_parameter put_parameter.o ../../src/libs/libpnetcdf.la ../common/libtestutils.la -lm libtool: link: /usr/bin/mpif77 -I../../src/binding/f77 -DHAVE_DECL_MPI_OFFSET -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -fPIC -g -Wl,-z -Wl,relro -Wl,--no-as-needed -Wl,--as-needed -g -o put_parameter put_parameter.o ../../src/libs/.libs/libpnetcdf.a ../common/.libs/libtestutils.a -lgfortran -lm /usr/bin/mpif77 -DHAVE_CONFIG_H -I. -I../../../test/testcases -I../../src/include -I../../../src/include -I../../../test/testcases/../common -I../../src/include -Wdate-time -D_FORTIFY_SOURCE=2 -I../../src/binding/f77 -DHAVE_DECL_MPI_OFFSET -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -fPIC -g -c -o test_vardf.o ../../../test/testcases/test_vardf.F /bin/bash ../../libtool --tag=F77 --mode=link /usr/bin/mpif77 -I../../src/binding/f77 -DHAVE_DECL_MPI_OFFSET -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -fPIC -g -Wl,-z,relro -Wl,--no-as-needed -lgfortran -Wl,--as-needed -g -o test_vardf test_vardf.o ../../src/libs/libpnetcdf.la ../common/libtestutils.la -lm libtool: link: /usr/bin/mpif77 -I../../src/binding/f77 -DHAVE_DECL_MPI_OFFSET -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -fPIC -g -Wl,-z -Wl,relro -Wl,--no-as-needed -Wl,--as-needed -g -o test_vardf test_vardf.o ../../src/libs/.libs/libpnetcdf.a ../common/.libs/libtestutils.a -lgfortran -lm m4 -DPNETCDF -I../../../m4 ../../../test/testcases/put_all_kinds.m4 >put_all_kinds.c /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../test/testcases -I../../src/include -I../../../src/include -I../../../test/testcases/../common -I../../src/include -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_DECL_MPI_OFFSET -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c -o put_all_kinds.o put_all_kinds.c /bin/bash ../../libtool --tag=CC --mode=link /usr/bin/mpicc -DHAVE_DECL_MPI_OFFSET -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -Wl,-z,relro -Wl,--no-as-needed -lgfortran -Wl,--as-needed -g -o put_all_kinds put_all_kinds.o ../../src/libs/libpnetcdf.la ../common/libtestutils.la -lm libtool: link: /usr/bin/mpicc -DHAVE_DECL_MPI_OFFSET -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -Wl,-z -Wl,relro -Wl,--no-as-needed -Wl,--as-needed -g -o put_all_kinds put_all_kinds.o ../../src/libs/.libs/libpnetcdf.a ../common/.libs/libtestutils.a -lgfortran -lm /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../test/testcases -I../../src/include -I../../../src/include -I../../../test/testcases/../common -I../../src/include -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_DECL_MPI_OFFSET -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c -o redef1.o ../../../test/testcases/redef1.c /bin/bash ../../libtool --tag=CC --mode=link /usr/bin/mpicc -DHAVE_DECL_MPI_OFFSET -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -Wl,-z,relro -Wl,--no-as-needed -lgfortran -Wl,--as-needed -g -o redef1 redef1.o ../../src/libs/libpnetcdf.la ../common/libtestutils.la -lm libtool: link: /usr/bin/mpicc -DHAVE_DECL_MPI_OFFSET -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -Wl,-z -Wl,relro -Wl,--no-as-needed -Wl,--as-needed -g -o redef1 redef1.o ../../src/libs/.libs/libpnetcdf.a ../common/.libs/libtestutils.a -lgfortran -lm make[4]: 'tst_vars_fill' is up to date. m4 -DPNETCDF -I../../../m4 ../../../test/testcases/iput_all_kinds.m4 >iput_all_kinds.c /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../test/testcases -I../../src/include -I../../../src/include -I../../../test/testcases/../common -I../../src/include -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_DECL_MPI_OFFSET -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c -o iput_all_kinds.o iput_all_kinds.c /bin/bash ../../libtool --tag=CC --mode=link /usr/bin/mpicc -DHAVE_DECL_MPI_OFFSET -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -Wl,-z,relro -Wl,--no-as-needed -lgfortran -Wl,--as-needed -g -o iput_all_kinds iput_all_kinds.o ../../src/libs/libpnetcdf.la ../common/libtestutils.la -lm libtool: link: /usr/bin/mpicc -DHAVE_DECL_MPI_OFFSET -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -Wl,-z -Wl,relro -Wl,--no-as-needed -Wl,--as-needed -g -o iput_all_kinds iput_all_kinds.o ../../src/libs/.libs/libpnetcdf.a ../common/.libs/libtestutils.a -lgfortran -lm make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test/testcases' /usr/bin/make check-TESTS make[4]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test/testcases' make[5]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test/testcases' PASS: ncmpi_vars_null_stride PASS: vectors PASS: collective_error PASS: test_varm PASS: alignment_test PASS: flexible PASS: flexible2 PASS: flexible_varm PASS: nonblocking PASS: noclobber PASS: record PASS: inq_num_vars PASS: varn_int PASS: modes PASS: one_record PASS: inq_recsize PASS: test_vard PASS: test_vard_rec PASS: test_vard_multiple PASS: varn_contig PASS: ivarn PASS: check_striping PASS: add_var PASS: buftype_free PASS: last_large_var PASS: check_type PASS: test_erange PASS: scalar PASS: null_args PASS: tst_dimsizes PASS: mix_collectives PASS: large_var_cdf5 PASS: tst_max_var_dims PASS: tst_info PASS: tst_vars_fill PASS: tst_def_var_fill PASS: test_fillvalue PASS: varn_intf PASS: attrf PASS: buftype_freef PASS: put_parameter PASS: test_vardf PASS: seq_runs.sh ============================================================================ Testsuite summary for parallel-netcdf 1.10.0 ============================================================================ # TOTAL: 43 # PASS: 43 # SKIP: 0 # XFAIL: 0 # FAIL: 0 # XPASS: 0 # ERROR: 0 ============================================================================ make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test/testcases' make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test/testcases' make[3]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test/testcases' Making check in nonblocking make[3]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test/nonblocking' /usr/bin/make check-am make[4]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test/nonblocking' /usr/bin/make test_bput interleaved i_varn_int64 flexible_bput wait_after_indep req_all i_varn_indef large_num_reqs bput_varn column_wise mcoll_testf77 test_bputf77 mcoll_perf make[5]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test/nonblocking' /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../test/nonblocking -I../../src/include -I../../../src/include -I../../../test/nonblocking/../common -I../../src/include -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_DECL_MPI_OFFSET -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c -o test_bput.o ../../../test/nonblocking/test_bput.c /bin/bash ../../libtool --tag=CC --mode=link /usr/bin/mpicc -DHAVE_DECL_MPI_OFFSET -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -Wl,-z,relro -Wl,--no-as-needed -lgfortran -Wl,--as-needed -g -o test_bput test_bput.o 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-I../../src/include -I../../../src/include -I../../../test/nonblocking/../common -I../../src/include -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_DECL_MPI_OFFSET -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c -o large_num_reqs.o ../../../test/nonblocking/large_num_reqs.c /bin/bash ../../libtool --tag=CC --mode=link /usr/bin/mpicc -DHAVE_DECL_MPI_OFFSET -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -Wl,-z,relro -Wl,--no-as-needed -lgfortran -Wl,--as-needed -g -o large_num_reqs large_num_reqs.o ../../src/libs/libpnetcdf.la ../common/libtestutils.la -lm libtool: link: /usr/bin/mpicc -DHAVE_DECL_MPI_OFFSET -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -Wl,-z -Wl,relro -Wl,--no-as-needed -Wl,--as-needed -g -o large_num_reqs large_num_reqs.o ../../src/libs/.libs/libpnetcdf.a 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bput_varn.o ../../src/libs/.libs/libpnetcdf.a ../common/.libs/libtestutils.a -lgfortran -lm /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../test/nonblocking -I../../src/include -I../../../src/include -I../../../test/nonblocking/../common -I../../src/include -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_DECL_MPI_OFFSET -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c -o column_wise.o column_wise.c /bin/bash ../../libtool --tag=CC --mode=link /usr/bin/mpicc -DHAVE_DECL_MPI_OFFSET -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -Wl,-z,relro -Wl,--no-as-needed -lgfortran -Wl,--as-needed -g -o column_wise column_wise.o ../../src/libs/libpnetcdf.la ../common/libtestutils.la -lm libtool: link: /usr/bin/mpicc -DHAVE_DECL_MPI_OFFSET -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -Wl,-z -Wl,relro 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-I../../src/include -I../../../src/include -I../../../test/nonblocking/../common -I../../src/include -Wdate-time -D_FORTIFY_SOURCE=2 -DHAVE_DECL_MPI_OFFSET -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c -o mcoll_perf.o ../../../test/nonblocking/mcoll_perf.c ../../../test/nonblocking/mcoll_perf.c: In function 'main': ../../../test/nonblocking/mcoll_perf.c:456:31: warning: '%d' directive writing 1 byte into a region of size between 0 and 255 [-Wformat-overflow=] sprintf(filename, "%s.%d.%d.%d.nc", fbasename, length, nvars, k); ^~ ../../../test/nonblocking/mcoll_perf.c:456:27: note: directive argument in the range [0, 10] sprintf(filename, "%s.%d.%d.%d.nc", fbasename, length, nvars, k); ^~~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:873, from ../../../test/nonblocking/mcoll_perf.c:8: /usr/include/x86_64-linux-gnu/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 10 and 266 bytes into a destination of size 256 return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __bos (__s), __fmt, __va_arg_pack ()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ../../../test/nonblocking/mcoll_perf.c:190:59: warning: '%s' directive writing up to 255 bytes into a region of size between 217 and 482 [-Wformat-overflow=] sprintf(str,"variable[%d]: name1(%s) != name2(%s)",i,name1,name2); ^~ ~~~~~ In file included from /usr/include/stdio.h:873, from ../../../test/nonblocking/mcoll_perf.c:8: /usr/include/x86_64-linux-gnu/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 32 and 552 bytes into a destination of size 512 return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __bos (__s), __fmt, __va_arg_pack ()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ../../../test/nonblocking/mcoll_perf.c:216:62: warning: '%s' directive writing up to 255 bytes into a region of size between 209 and 484 [-Wformat-overflow=] sprintf(str,"variable[%d] %s: attr name[%d] (%s) != (%s)",i,name,j,name1,name2); ^~ ~~~~~ In file included from /usr/include/stdio.h:873, from ../../../test/nonblocking/mcoll_perf.c:8: /usr/include/x86_64-linux-gnu/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 36 and 821 bytes into a destination of size 512 return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __bos (__s), __fmt, __va_arg_pack ()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ../../../test/nonblocking/mcoll_perf.c:142:59: warning: '%s' directive writing up to 255 bytes into a region of size between 217 and 482 [-Wformat-overflow=] sprintf(str,"attribute[%d] name1(%s) != name2(%s)",i,name1,name2); ^~ ~~~~~ In file included from /usr/include/stdio.h:873, from ../../../test/nonblocking/mcoll_perf.c:8: /usr/include/x86_64-linux-gnu/bits/stdio2.h:36:10: note: '__builtin___sprintf_chk' output between 32 and 552 bytes into a destination of size 512 return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ __bos (__s), __fmt, __va_arg_pack ()); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /bin/bash ../../libtool --tag=CC --mode=link /usr/bin/mpicc -DHAVE_DECL_MPI_OFFSET -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -Wl,-z,relro -Wl,--no-as-needed -lgfortran -Wl,--as-needed -g -o mcoll_perf mcoll_perf.o ../../src/libs/libpnetcdf.la ../common/libtestutils.la -lm libtool: link: /usr/bin/mpicc -DHAVE_DECL_MPI_OFFSET -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -Wl,-z -Wl,relro -Wl,--no-as-needed -Wl,--as-needed -g -o mcoll_perf mcoll_perf.o ../../src/libs/.libs/libpnetcdf.a ../common/.libs/libtestutils.a -lgfortran -lm make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test/nonblocking' /usr/bin/make check-TESTS make[5]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test/nonblocking' make[6]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test/nonblocking' PASS: test_bput PASS: interleaved PASS: i_varn_int64 PASS: flexible_bput PASS: wait_after_indep PASS: req_all PASS: i_varn_indef PASS: large_num_reqs PASS: bput_varn PASS: column_wise PASS: mcoll_testf77 PASS: test_bputf77 PASS: seq_runs.sh ============================================================================ Testsuite summary for parallel-netcdf 1.10.0 ============================================================================ # TOTAL: 13 # PASS: 13 # SKIP: 0 # XFAIL: 0 # FAIL: 0 # XPASS: 0 # ERROR: 0 ============================================================================ make[6]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test/nonblocking' make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test/nonblocking' make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test/nonblocking' make[3]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test/nonblocking' Making check in largefile make[3]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test/largefile' /usr/bin/make large_files large_var large_dims_vars_attrs high_dim_var tst_cdf5_begin large_coalesce bigrecords make[4]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test/largefile' /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../test/largefile -I../../src/include -I../../../test/largefile/../common -I../../../src/include -I../../src/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c -o large_files.o ../../../test/largefile/large_files.c /bin/bash ../../libtool --tag=CC --mode=link /usr/bin/mpicc -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -Wl,-z,relro 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-Wl,-z,relro -Wl,--no-as-needed -lgfortran -Wl,--as-needed -g -o large_dims_vars_attrs large_dims_vars_attrs.o ../../src/libs/libpnetcdf.la ../common/libtestutils.la libtool: link: /usr/bin/mpicc -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -Wl,-z -Wl,relro -Wl,--no-as-needed -Wl,--as-needed -g -o large_dims_vars_attrs large_dims_vars_attrs.o ../../src/libs/.libs/libpnetcdf.a ../common/.libs/libtestutils.a -lgfortran /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../test/largefile -I../../src/include -I../../../test/largefile/../common -I../../../src/include -I../../src/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c -o high_dim_var.o ../../../test/largefile/high_dim_var.c /bin/bash ../../libtool --tag=CC --mode=link /usr/bin/mpicc -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -Wl,-z,relro -Wl,--no-as-needed -lgfortran -Wl,--as-needed -g -o high_dim_var high_dim_var.o ../../src/libs/libpnetcdf.la ../common/libtestutils.la libtool: link: /usr/bin/mpicc -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -Wl,-z -Wl,relro -Wl,--no-as-needed -Wl,--as-needed -g -o high_dim_var high_dim_var.o ../../src/libs/.libs/libpnetcdf.a ../common/.libs/libtestutils.a -lgfortran /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../test/largefile -I../../src/include -I../../../test/largefile/../common -I../../../src/include -I../../src/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c -o tst_cdf5_begin.o ../../../test/largefile/tst_cdf5_begin.c /bin/bash ../../libtool --tag=CC --mode=link /usr/bin/mpicc -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -Wl,-z,relro -Wl,--no-as-needed -lgfortran -Wl,--as-needed -g -o tst_cdf5_begin tst_cdf5_begin.o ../../src/libs/libpnetcdf.la ../common/libtestutils.la libtool: link: /usr/bin/mpicc -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -Wl,-z -Wl,relro -Wl,--no-as-needed -Wl,--as-needed -g -o tst_cdf5_begin tst_cdf5_begin.o ../../src/libs/.libs/libpnetcdf.a ../common/.libs/libtestutils.a -lgfortran /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../test/largefile -I../../src/include -I../../../test/largefile/../common -I../../../src/include -I../../src/include -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c -o large_coalesce.o ../../../test/largefile/large_coalesce.c /bin/bash ../../libtool --tag=CC --mode=link /usr/bin/mpicc -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -Wl,-z,relro -Wl,--no-as-needed -lgfortran -Wl,--as-needed -g -o large_coalesce large_coalesce.o ../../src/libs/libpnetcdf.la ../common/libtestutils.la libtool: link: /usr/bin/mpicc -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -Wl,-z -Wl,relro -Wl,--no-as-needed -Wl,--as-needed -g -o large_coalesce large_coalesce.o ../../src/libs/.libs/libpnetcdf.a ../common/.libs/libtestutils.a -lgfortran /usr/bin/mpif77 -I../../src/binding/f77 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -fPIC -g -c -o bigrecords.o ../../../test/largefile/bigrecords.f /bin/bash ../../libtool --tag=F77 --mode=link /usr/bin/mpif77 -I../../src/binding/f77 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -fPIC -g -Wl,-z,relro -Wl,--no-as-needed -lgfortran -Wl,--as-needed -g -o bigrecords bigrecords.o ../../src/libs/libpnetcdf.la ../common/libtestutils.la libtool: link: /usr/bin/mpif77 -I../../src/binding/f77 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -fPIC -g -Wl,-z -Wl,relro -Wl,--no-as-needed -Wl,--as-needed -g -o bigrecords bigrecords.o ../../src/libs/.libs/libpnetcdf.a ../common/.libs/libtestutils.a -lgfortran make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test/largefile' /usr/bin/make check-TESTS make[4]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test/largefile' make[5]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test/largefile' ============================================================================ Testsuite summary for parallel-netcdf 1.10.0 ============================================================================ # TOTAL: 0 # PASS: 0 # SKIP: 0 # XFAIL: 0 # FAIL: 0 # XPASS: 0 # ERROR: 0 ============================================================================ make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test/largefile' make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test/largefile' make[3]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test/largefile' Making check in CXX make[3]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test/CXX' /usr/bin/make nctst test_classic make[4]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test/CXX' /usr/bin/mpicxx -DHAVE_CONFIG_H -I. -I../../../test/CXX -I../../src/include -I../../../src/include -I../../src/binding/cxx -I../../../test/CXX/../common -I../../src/include -DHAVE_DECL_MPI_OFFSET -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c -o nctst.o ../../../test/CXX/nctst.cpp /bin/bash ../../libtool --tag=CXX --mode=link /usr/bin/mpicxx -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -Wl,-z,relro -Wl,--no-as-needed -lgfortran -Wl,--as-needed -g -o nctst nctst.o ../../src/libs/libpnetcdf.la ../common/libtestutils.la libtool: link: /usr/bin/mpicxx -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -Wl,-z -Wl,relro -Wl,--no-as-needed -Wl,--as-needed -g -o nctst nctst.o ../../src/libs/.libs/libpnetcdf.a ../common/.libs/libtestutils.a -lgfortran /usr/bin/mpicxx -DHAVE_CONFIG_H -I. -I../../../test/CXX -I../../src/include -I../../../src/include -I../../src/binding/cxx -I../../../test/CXX/../common -I../../src/include -DHAVE_DECL_MPI_OFFSET -Wdate-time -D_FORTIFY_SOURCE=2 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c -o test_classic.o ../../../test/CXX/test_classic.cpp /bin/bash ../../libtool --tag=CXX --mode=link /usr/bin/mpicxx -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -Wl,-z,relro -Wl,--no-as-needed -lgfortran -Wl,--as-needed -g -o test_classic test_classic.o ../../src/libs/libpnetcdf.la ../common/libtestutils.la libtool: link: /usr/bin/mpicxx -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -Wl,-z -Wl,relro -Wl,--no-as-needed -Wl,--as-needed -g -o test_classic test_classic.o ../../src/libs/.libs/libpnetcdf.a ../common/.libs/libtestutils.a -lgfortran make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test/CXX' /usr/bin/make check-TESTS make[4]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test/CXX' make[5]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test/CXX' PASS: nctst PASS: test_classic ============================================================================ Testsuite summary for parallel-netcdf 1.10.0 ============================================================================ # TOTAL: 2 # PASS: 2 # SKIP: 0 # XFAIL: 0 # FAIL: 0 # XPASS: 0 # ERROR: 0 ============================================================================ make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test/CXX' make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test/CXX' make[3]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test/CXX' Making check in nf_test make[3]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test/nf_test' /usr/bin/make nf_test make[4]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test/nf_test' /usr/bin/mpif77 -DHAVE_CONFIG_H -I. -I../../../test/nf_test -I../../src/include -I../../src/include -I../../../src/include -Wdate-time -D_FORTIFY_SOURCE=2 -I../../src/binding/f77 -DRELAX_COORD_BOUND -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -fPIC -g -c -o nf_test.o ../../../test/nf_test/nf_test.F /usr/bin/mpif77 -DHAVE_CONFIG_H -I. -I../../../test/nf_test -I../../src/include -I../../src/include -I../../../src/include -Wdate-time -D_FORTIFY_SOURCE=2 -I../../src/binding/f77 -DRELAX_COORD_BOUND -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -fPIC -g -c -o nf_error.o ../../../test/nf_test/nf_error.F /usr/bin/mpif77 -DHAVE_CONFIG_H -I. -I../../../test/nf_test -I../../src/include -I../../src/include -I../../../src/include -Wdate-time -D_FORTIFY_SOURCE=2 -I../../src/binding/f77 -DRELAX_COORD_BOUND -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -fPIC -g -c -o test_read.o ../../../test/nf_test/test_read.F /usr/bin/mpif77 -DHAVE_CONFIG_H -I. -I../../../test/nf_test -I../../src/include -I../../src/include -I../../../src/include -Wdate-time -D_FORTIFY_SOURCE=2 -I../../src/binding/f77 -DRELAX_COORD_BOUND -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -fPIC -g -c -o test_write.o ../../../test/nf_test/test_write.F /usr/bin/mpif77 -DHAVE_CONFIG_H -I. -I../../../test/nf_test -I../../src/include -I../../src/include -I../../../src/include -Wdate-time -D_FORTIFY_SOURCE=2 -I../../src/binding/f77 -DRELAX_COORD_BOUND -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -fPIC -g -c -o util.o ../../../test/nf_test/util.F /usr/bin/mpicc -DHAVE_CONFIG_H -I. -I../../../test/nf_test -I../../src/include -I../../src/include -I../../../src/include -Wdate-time -D_FORTIFY_SOURCE=2 -I../../src/binding/f77 -I../../../src/binding/f77 -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -Wformat -Werror=format-security -fPIC -g -c -o fortlib.o ../../../test/nf_test/fortlib.c m4 -DPNETCDF -I../../../m4 ../../../test/nf_test/test_get.m4 >test_get.F /usr/bin/mpif77 -DHAVE_CONFIG_H -I. -I../../../test/nf_test -I../../src/include -I../../src/include -I../../../src/include -Wdate-time -D_FORTIFY_SOURCE=2 -I../../src/binding/f77 -DRELAX_COORD_BOUND -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -fPIC -g -c -o test_get.o test_get.F m4 -DPNETCDF -I../../../m4 ../../../test/nf_test/test_put.m4 >test_put.F /usr/bin/mpif77 -DHAVE_CONFIG_H -I. -I../../../test/nf_test -I../../src/include -I../../src/include -I../../../src/include -Wdate-time -D_FORTIFY_SOURCE=2 -I../../src/binding/f77 -DRELAX_COORD_BOUND -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -fPIC -g -c -o test_put.o test_put.F m4 -DPNETCDF -I../../../m4 ../../../test/nf_test/test_iget.m4 >test_iget.F /usr/bin/mpif77 -DHAVE_CONFIG_H -I. -I../../../test/nf_test -I../../src/include -I../../src/include -I../../../src/include -Wdate-time -D_FORTIFY_SOURCE=2 -I../../src/binding/f77 -DRELAX_COORD_BOUND -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -fPIC -g -c -o test_iget.o test_iget.F m4 -DPNETCDF -I../../../m4 ../../../test/nf_test/test_iput.m4 >test_iput.F /usr/bin/mpif77 -DHAVE_CONFIG_H -I. -I../../../test/nf_test -I../../src/include -I../../src/include -I../../../src/include -Wdate-time -D_FORTIFY_SOURCE=2 -I../../src/binding/f77 -DRELAX_COORD_BOUND -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -fPIC -g -c -o test_iput.o test_iput.F /bin/bash ../../libtool --tag=F77 --mode=link /usr/bin/mpif77 -I../../src/binding/f77 -DRELAX_COORD_BOUND -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -fPIC -g -Wl,-z,relro -Wl,--no-as-needed -lgfortran -Wl,--as-needed -g -o nf_test nf_test.o nf_error.o test_read.o test_write.o util.o fortlib.o test_get.o test_put.o test_iget.o test_iput.o ../../src/libs/libpnetcdf.la ../common/libtestutils.la libtool: link: /usr/bin/mpif77 -I../../src/binding/f77 -DRELAX_COORD_BOUND -g -O2 -ffile-prefix-map=/build/pnetcdf-1.10.0=. -fstack-protector-strong -fPIC -g -Wl,-z -Wl,relro -Wl,--no-as-needed -Wl,--as-needed -g -o nf_test nf_test.o nf_error.o test_read.o test_write.o util.o fortlib.o test_get.o test_put.o test_iget.o test_iput.o ../../src/libs/.libs/libpnetcdf.a ../common/.libs/libtestutils.a -lgfortran make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test/nf_test' /usr/bin/make check-TESTS make[4]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test/nf_test' make[5]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test/nf_test' PASS: seq_runs.sh ============================================================================ Testsuite summary for parallel-netcdf 1.10.0 ============================================================================ # TOTAL: 1 # PASS: 1 # SKIP: 0 # XFAIL: 0 # FAIL: 0 # XPASS: 0 # ERROR: 0 ============================================================================ make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test/nf_test' make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test/nf_test' make[3]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test/nf_test' make[3]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test' make[3]: Nothing to be done for 'check-am'. make[3]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test' make[2]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test' ( cd build-shared/test && /usr/bin/make check ) make[2]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test' Making check in common make[3]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test/common' /usr/bin/make libtestutils.la libtestutilsf.la make[4]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test/common' make[4]: 'libtestutils.la' is up to date. make[4]: 'libtestutilsf.la' is up to date. make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test/common' make[3]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test/common' Making check in C make[3]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test/C' /usr/bin/make pres_temp_4D_wr pres_temp_4D_rd make[4]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test/C' make[4]: 'pres_temp_4D_wr' is up to date. make[4]: 'pres_temp_4D_rd' is up to date. make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test/C' /usr/bin/make check-TESTS make[4]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test/C' make[5]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test/C' PASS: pres_temp_4D_wr PASS: pres_temp_4D_rd ============================================================================ Testsuite summary for parallel-netcdf 1.10.0 ============================================================================ # TOTAL: 2 # PASS: 2 # SKIP: 0 # XFAIL: 0 # FAIL: 0 # XPASS: 0 # ERROR: 0 ============================================================================ make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test/C' make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test/C' make[3]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test/C' Making check in fandc make[3]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test/fandc' /usr/bin/make pnctest csnap pnf_test pnctestf fixedform freeform make[4]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test/fandc' make[4]: 'pnctest' is up to date. make[4]: 'csnap' is up to date. make[4]: 'pnf_test' is up to date. make[4]: 'pnctestf' is up to date. make[4]: 'fixedform' is up to date. make[4]: 'freeform' is up to date. make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test/fandc' make[3]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test/fandc' Making check in nc_test make[3]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test/nc_test' /usr/bin/make check-am make[4]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test/nc_test' /usr/bin/make t_nc tst_misc tst_norm tst_small tst_names tst_atts3 tst_atts tst_nofill nc_test make[5]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test/nc_test' make[5]: 't_nc' is up to date. make[5]: 'tst_misc' is up to date. make[5]: 'tst_norm' is up to date. make[5]: 'tst_small' is up to date. make[5]: 'tst_names' is up to date. make[5]: 'tst_atts3' is up to date. make[5]: 'tst_atts' is up to date. make[5]: 'tst_nofill' is up to date. make[5]: 'nc_test' is up to date. make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test/nc_test' /usr/bin/make check-TESTS make[5]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test/nc_test' make[6]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test/nc_test' PASS: t_nc PASS: tst_misc PASS: tst_norm PASS: tst_small PASS: tst_names PASS: tst_atts3 PASS: tst_atts PASS: seq_runs.sh ============================================================================ Testsuite summary for parallel-netcdf 1.10.0 ============================================================================ # TOTAL: 8 # PASS: 8 # SKIP: 0 # XFAIL: 0 # FAIL: 0 # XPASS: 0 # ERROR: 0 ============================================================================ make[6]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test/nc_test' make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test/nc_test' make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test/nc_test' make[3]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test/nc_test' Making check in cdf_format make[3]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test/cdf_format' /usr/bin/make test_inq_format cdf_type dim_cdf12 tst_open_cdf5 tst_corrupt make[4]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test/cdf_format' make[4]: 'test_inq_format' is up to date. make[4]: 'cdf_type' is up to date. make[4]: 'dim_cdf12' is up to date. make[4]: 'tst_open_cdf5' is up to date. make[4]: 'tst_corrupt' is up to date. make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test/cdf_format' /usr/bin/make check-TESTS make[4]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test/cdf_format' make[5]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test/cdf_format' PASS: cdf_type PASS: dim_cdf12 PASS: seq_runs.sh XFAIL: xfail_runs.sh ============================================================================ Testsuite summary for parallel-netcdf 1.10.0 ============================================================================ # TOTAL: 4 # PASS: 3 # SKIP: 0 # XFAIL: 1 # FAIL: 0 # XPASS: 0 # ERROR: 0 ============================================================================ make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test/cdf_format' make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test/cdf_format' make[3]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test/cdf_format' Making check in header make[3]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test/header' /usr/bin/make header_consistency make[4]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test/header' make[4]: 'header_consistency' is up to date. make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test/header' make[3]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test/header' Making check in testcases make[3]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test/testcases' /usr/bin/make ncmpi_vars_null_stride vectors collective_error test_varm alignment_test flexible flexible2 flexible_varm nonblocking noclobber record inq_num_vars varn_int modes one_record inq_recsize test_vard test_vard_rec test_vard_multiple varn_contig ivarn check_striping add_var buftype_free last_large_var check_type test_erange scalar null_args tst_dimsizes mix_collectives large_var_cdf5 tst_max_var_dims tst_info tst_vars_fill tst_def_var_fill test_fillvalue varn_intf attrf buftype_freef put_parameter test_vardf put_all_kinds redef1 tst_vars_fill iput_all_kinds make[4]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test/testcases' make[4]: 'ncmpi_vars_null_stride' is up to date. make[4]: 'vectors' is up to date. make[4]: 'collective_error' is up to date. make[4]: 'test_varm' is up to date. make[4]: 'alignment_test' is up to date. make[4]: 'flexible' is up to date. make[4]: 'flexible2' is up to date. make[4]: 'flexible_varm' is up to date. make[4]: 'nonblocking' is up to date. make[4]: 'noclobber' is up to date. make[4]: 'record' is up to date. make[4]: 'inq_num_vars' is up to date. make[4]: 'varn_int' is up to date. make[4]: 'modes' is up to date. make[4]: 'one_record' is up to date. make[4]: 'inq_recsize' is up to date. make[4]: 'test_vard' is up to date. make[4]: 'test_vard_rec' is up to date. make[4]: 'test_vard_multiple' is up to date. make[4]: 'varn_contig' is up to date. make[4]: 'ivarn' is up to date. make[4]: 'check_striping' is up to date. make[4]: 'add_var' is up to date. make[4]: 'buftype_free' is up to date. make[4]: 'last_large_var' is up to date. make[4]: 'check_type' is up to date. make[4]: 'test_erange' is up to date. make[4]: 'scalar' is up to date. make[4]: 'null_args' is up to date. make[4]: 'tst_dimsizes' is up to date. make[4]: 'mix_collectives' is up to date. make[4]: 'large_var_cdf5' is up to date. make[4]: 'tst_max_var_dims' is up to date. make[4]: 'tst_info' is up to date. make[4]: 'tst_vars_fill' is up to date. make[4]: 'tst_def_var_fill' is up to date. make[4]: 'test_fillvalue' is up to date. make[4]: 'varn_intf' is up to date. make[4]: 'attrf' is up to date. make[4]: 'buftype_freef' is up to date. make[4]: 'put_parameter' is up to date. make[4]: 'test_vardf' is up to date. make[4]: 'put_all_kinds' is up to date. make[4]: 'redef1' is up to date. make[4]: 'tst_vars_fill' is up to date. make[4]: 'iput_all_kinds' is up to date. make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test/testcases' /usr/bin/make check-TESTS make[4]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test/testcases' make[5]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test/testcases' PASS: ncmpi_vars_null_stride PASS: vectors PASS: collective_error PASS: test_varm PASS: alignment_test PASS: flexible PASS: flexible2 PASS: flexible_varm PASS: nonblocking PASS: noclobber PASS: record PASS: inq_num_vars PASS: varn_int PASS: modes PASS: one_record PASS: inq_recsize PASS: test_vard PASS: test_vard_rec PASS: test_vard_multiple PASS: varn_contig PASS: ivarn PASS: check_striping PASS: add_var PASS: buftype_free PASS: last_large_var PASS: check_type PASS: test_erange PASS: scalar PASS: null_args PASS: tst_dimsizes PASS: mix_collectives PASS: large_var_cdf5 PASS: tst_max_var_dims PASS: tst_info PASS: tst_vars_fill PASS: tst_def_var_fill PASS: test_fillvalue PASS: varn_intf PASS: attrf PASS: buftype_freef PASS: put_parameter PASS: test_vardf PASS: seq_runs.sh ============================================================================ Testsuite summary for parallel-netcdf 1.10.0 ============================================================================ # TOTAL: 43 # PASS: 43 # SKIP: 0 # XFAIL: 0 # FAIL: 0 # XPASS: 0 # ERROR: 0 ============================================================================ make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test/testcases' make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test/testcases' make[3]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test/testcases' Making check in nonblocking make[3]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test/nonblocking' /usr/bin/make check-am make[4]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test/nonblocking' /usr/bin/make test_bput interleaved i_varn_int64 flexible_bput wait_after_indep req_all i_varn_indef large_num_reqs bput_varn column_wise mcoll_testf77 test_bputf77 mcoll_perf make[5]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test/nonblocking' make[5]: 'test_bput' is up to date. make[5]: 'interleaved' is up to date. make[5]: 'i_varn_int64' is up to date. make[5]: 'flexible_bput' is up to date. make[5]: 'wait_after_indep' is up to date. make[5]: 'req_all' is up to date. make[5]: 'i_varn_indef' is up to date. make[5]: 'large_num_reqs' is up to date. make[5]: 'bput_varn' is up to date. make[5]: 'column_wise' is up to date. make[5]: 'mcoll_testf77' is up to date. make[5]: 'test_bputf77' is up to date. make[5]: 'mcoll_perf' is up to date. make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test/nonblocking' /usr/bin/make check-TESTS make[5]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test/nonblocking' make[6]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test/nonblocking' PASS: test_bput PASS: interleaved PASS: i_varn_int64 PASS: flexible_bput PASS: wait_after_indep PASS: req_all PASS: i_varn_indef PASS: large_num_reqs PASS: bput_varn PASS: column_wise PASS: mcoll_testf77 PASS: test_bputf77 PASS: seq_runs.sh ============================================================================ Testsuite summary for parallel-netcdf 1.10.0 ============================================================================ # TOTAL: 13 # PASS: 13 # SKIP: 0 # XFAIL: 0 # FAIL: 0 # XPASS: 0 # ERROR: 0 ============================================================================ make[6]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test/nonblocking' make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test/nonblocking' make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test/nonblocking' make[3]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test/nonblocking' Making check in largefile make[3]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test/largefile' /usr/bin/make large_files large_var large_dims_vars_attrs high_dim_var tst_cdf5_begin large_coalesce bigrecords make[4]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test/largefile' make[4]: 'large_files' is up to date. make[4]: 'large_var' is up to date. make[4]: 'large_dims_vars_attrs' is up to date. make[4]: 'high_dim_var' is up to date. make[4]: 'tst_cdf5_begin' is up to date. make[4]: 'large_coalesce' is up to date. make[4]: 'bigrecords' is up to date. make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test/largefile' /usr/bin/make check-TESTS make[4]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test/largefile' make[5]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test/largefile' ============================================================================ Testsuite summary for parallel-netcdf 1.10.0 ============================================================================ # TOTAL: 0 # PASS: 0 # SKIP: 0 # XFAIL: 0 # FAIL: 0 # XPASS: 0 # ERROR: 0 ============================================================================ make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test/largefile' make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test/largefile' make[3]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test/largefile' Making check in CXX make[3]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test/CXX' /usr/bin/make nctst test_classic make[4]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test/CXX' make[4]: 'nctst' is up to date. make[4]: 'test_classic' is up to date. make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test/CXX' /usr/bin/make check-TESTS make[4]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test/CXX' make[5]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test/CXX' PASS: nctst PASS: test_classic ============================================================================ Testsuite summary for parallel-netcdf 1.10.0 ============================================================================ # TOTAL: 2 # PASS: 2 # SKIP: 0 # XFAIL: 0 # FAIL: 0 # XPASS: 0 # ERROR: 0 ============================================================================ make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test/CXX' make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test/CXX' make[3]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test/CXX' Making check in nf_test make[3]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test/nf_test' /usr/bin/make nf_test make[4]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test/nf_test' make[4]: 'nf_test' is up to date. make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test/nf_test' /usr/bin/make check-TESTS make[4]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test/nf_test' make[5]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test/nf_test' PASS: seq_runs.sh ============================================================================ Testsuite summary for parallel-netcdf 1.10.0 ============================================================================ # TOTAL: 1 # PASS: 1 # SKIP: 0 # XFAIL: 0 # FAIL: 0 # XPASS: 0 # ERROR: 0 ============================================================================ make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test/nf_test' make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test/nf_test' make[3]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test/nf_test' make[3]: Entering directory '/build/pnetcdf-1.10.0/build-shared/test' make[3]: Nothing to be done for 'check-am'. make[3]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test' make[2]: Leaving directory '/build/pnetcdf-1.10.0/build-shared/test' make[1]: Leaving directory '/build/pnetcdf-1.10.0' create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary dh binary --with fortran_mod dh_testroot dh_prep rm -f -- debian/libpnetcdf-dev.substvars debian/pnetcdf-bin.substvars debian/libpnetcdf0d.substvars rm -fr -- debian/.debhelper/generated/libpnetcdf-dev/ debian/libpnetcdf-dev/ debian/tmp/ debian/.debhelper/generated/pnetcdf-bin/ debian/pnetcdf-bin/ debian/.debhelper/generated/libpnetcdf0d/ debian/libpnetcdf0d/ debian/rules override_dh_auto_install make[1]: Entering directory '/build/pnetcdf-1.10.0' /usr/bin/make -C build-static install DESTDIR=/build/pnetcdf-1.10.0/debian/tmp/ make[2]: Entering directory '/build/pnetcdf-1.10.0/build-static' Making install in src make[3]: Entering directory '/build/pnetcdf-1.10.0/build-static/src' Making install in include make[4]: Entering directory '/build/pnetcdf-1.10.0/build-static/src/include' make[5]: Entering directory '/build/pnetcdf-1.10.0/build-static/src/include' make[5]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/build/pnetcdf-1.10.0/debian/tmp//usr/include' /usr/bin/install -c -m 644 pnetcdf.h '/build/pnetcdf-1.10.0/debian/tmp//usr/include' make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-static/src/include' make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-static/src/include' Making install in dispatchers make[4]: Entering directory '/build/pnetcdf-1.10.0/build-static/src/dispatchers' /usr/bin/make install-am make[5]: Entering directory '/build/pnetcdf-1.10.0/build-static/src/dispatchers' make[6]: Entering directory '/build/pnetcdf-1.10.0/build-static/src/dispatchers' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/build/pnetcdf-1.10.0/build-static/src/dispatchers' make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-static/src/dispatchers' make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-static/src/dispatchers' Making install in drivers make[4]: Entering directory '/build/pnetcdf-1.10.0/build-static/src/drivers' Making install in include make[5]: Entering directory '/build/pnetcdf-1.10.0/build-static/src/drivers/include' /usr/bin/make install-am make[6]: Entering directory '/build/pnetcdf-1.10.0/build-static/src/drivers/include' make[7]: Entering directory '/build/pnetcdf-1.10.0/build-static/src/drivers/include' make[7]: Nothing to be done for 'install-exec-am'. make[7]: Nothing to be done for 'install-data-am'. make[7]: Leaving directory '/build/pnetcdf-1.10.0/build-static/src/drivers/include' make[6]: Leaving directory '/build/pnetcdf-1.10.0/build-static/src/drivers/include' make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-static/src/drivers/include' Making install in common make[5]: Entering directory '/build/pnetcdf-1.10.0/build-static/src/drivers/common' /usr/bin/make install-am make[6]: Entering directory '/build/pnetcdf-1.10.0/build-static/src/drivers/common' make[7]: Entering directory '/build/pnetcdf-1.10.0/build-static/src/drivers/common' make[7]: Nothing to be done for 'install-exec-am'. make[7]: Nothing to be done for 'install-data-am'. make[7]: Leaving directory '/build/pnetcdf-1.10.0/build-static/src/drivers/common' make[6]: Leaving directory '/build/pnetcdf-1.10.0/build-static/src/drivers/common' make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-static/src/drivers/common' Making install in ncmpio make[5]: Entering directory '/build/pnetcdf-1.10.0/build-static/src/drivers/ncmpio' /usr/bin/make install-am make[6]: Entering directory '/build/pnetcdf-1.10.0/build-static/src/drivers/ncmpio' make[7]: Entering directory '/build/pnetcdf-1.10.0/build-static/src/drivers/ncmpio' make[7]: Nothing to be done for 'install-exec-am'. make[7]: Nothing to be done for 'install-data-am'. make[7]: Leaving directory '/build/pnetcdf-1.10.0/build-static/src/drivers/ncmpio' make[6]: Leaving directory '/build/pnetcdf-1.10.0/build-static/src/drivers/ncmpio' make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-static/src/drivers/ncmpio' make[5]: Entering directory '/build/pnetcdf-1.10.0/build-static/src/drivers' make[6]: Entering directory '/build/pnetcdf-1.10.0/build-static/src/drivers' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/build/pnetcdf-1.10.0/build-static/src/drivers' make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-static/src/drivers' make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-static/src/drivers' Making install in binding make[4]: Entering directory '/build/pnetcdf-1.10.0/build-static/src/binding' Making install in cxx make[5]: Entering directory '/build/pnetcdf-1.10.0/build-static/src/binding/cxx' /usr/bin/make install-am make[6]: Entering directory '/build/pnetcdf-1.10.0/build-static/src/binding/cxx' make[7]: Entering directory '/build/pnetcdf-1.10.0/build-static/src/binding/cxx' make[7]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/build/pnetcdf-1.10.0/debian/tmp//usr/include' /usr/bin/install -c -m 644 pnetcdf '/build/pnetcdf-1.10.0/debian/tmp//usr/include' make[7]: Leaving directory '/build/pnetcdf-1.10.0/build-static/src/binding/cxx' make[6]: Leaving directory '/build/pnetcdf-1.10.0/build-static/src/binding/cxx' make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-static/src/binding/cxx' Making install in f77 make[5]: Entering directory '/build/pnetcdf-1.10.0/build-static/src/binding/f77' make[6]: Entering directory '/build/pnetcdf-1.10.0/build-static/src/binding/f77' make[6]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/build/pnetcdf-1.10.0/debian/tmp//usr/include' /usr/bin/install -c -m 644 pnetcdf.inc '/build/pnetcdf-1.10.0/debian/tmp//usr/include' make[6]: Leaving directory '/build/pnetcdf-1.10.0/build-static/src/binding/f77' make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-static/src/binding/f77' Making install in f90 make[5]: Entering directory '/build/pnetcdf-1.10.0/build-static/src/binding/f90' /usr/bin/make install-am make[6]: Entering directory '/build/pnetcdf-1.10.0/build-static/src/binding/f90' make[7]: Entering directory '/build/pnetcdf-1.10.0/build-static/src/binding/f90' make[7]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/build/pnetcdf-1.10.0/debian/tmp//usr/include' /usr/bin/install -c -m 644 pnetcdf.mod '/build/pnetcdf-1.10.0/debian/tmp//usr/include' make[7]: Leaving directory '/build/pnetcdf-1.10.0/build-static/src/binding/f90' make[6]: Leaving directory '/build/pnetcdf-1.10.0/build-static/src/binding/f90' make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-static/src/binding/f90' make[5]: Entering directory '/build/pnetcdf-1.10.0/build-static/src/binding' make[6]: Entering directory '/build/pnetcdf-1.10.0/build-static/src/binding' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/build/pnetcdf-1.10.0/build-static/src/binding' make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-static/src/binding' make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-static/src/binding' Making install in packaging make[4]: Entering directory '/build/pnetcdf-1.10.0/build-static/src/packaging' make[5]: Entering directory '/build/pnetcdf-1.10.0/build-static/src/packaging' make[5]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/build/pnetcdf-1.10.0/debian/tmp//usr/lib/x86_64-linux-gnu/pkgconfig' /usr/bin/install -c -m 644 pnetcdf.pc '/build/pnetcdf-1.10.0/debian/tmp//usr/lib/x86_64-linux-gnu/pkgconfig' /usr/bin/make install-data-hook make[6]: Entering directory '/build/pnetcdf-1.10.0/build-static/src/packaging' /bin/sed -i'' -e 's|INSTALL_PREFIX|/usr|g ; s|INSTALL_EXEC_PREFIX|/usr|g' /build/pnetcdf-1.10.0/debian/tmp//usr/lib/x86_64-linux-gnu/pkgconfig/pnetcdf.pc make[6]: Leaving directory '/build/pnetcdf-1.10.0/build-static/src/packaging' make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-static/src/packaging' make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-static/src/packaging' Making install in . make[4]: Entering directory '/build/pnetcdf-1.10.0/build-static/src' make[5]: Entering directory '/build/pnetcdf-1.10.0/build-static/src' make[5]: Nothing to be done for 'install-exec-am'. make[5]: Nothing to be done for 'install-data-am'. make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-static/src' make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-static/src' Making install in libs make[4]: Entering directory '/build/pnetcdf-1.10.0/build-static/src/libs' make[5]: Entering directory '/build/pnetcdf-1.10.0/build-static/src/libs' /bin/mkdir -p '/build/pnetcdf-1.10.0/debian/tmp//usr/lib/x86_64-linux-gnu' /bin/bash ../../libtool --mode=install /usr/bin/install -c libpnetcdf.la '/build/pnetcdf-1.10.0/debian/tmp//usr/lib/x86_64-linux-gnu' libtool: install: /usr/bin/install -c .libs/libpnetcdf.lai /build/pnetcdf-1.10.0/debian/tmp//usr/lib/x86_64-linux-gnu/libpnetcdf.la libtool: install: /usr/bin/install -c .libs/libpnetcdf.a /build/pnetcdf-1.10.0/debian/tmp//usr/lib/x86_64-linux-gnu/libpnetcdf.a libtool: install: chmod 644 /build/pnetcdf-1.10.0/debian/tmp//usr/lib/x86_64-linux-gnu/libpnetcdf.a libtool: install: ranlib /build/pnetcdf-1.10.0/debian/tmp//usr/lib/x86_64-linux-gnu/libpnetcdf.a libtool: warning: remember to run 'libtool --finish /usr/lib/x86_64-linux-gnu' make[5]: Nothing to be done for 'install-data-am'. make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-static/src/libs' make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-static/src/libs' Making install in utils make[4]: Entering directory '/build/pnetcdf-1.10.0/build-static/src/utils' Making install in ncmpigen make[5]: Entering directory '/build/pnetcdf-1.10.0/build-static/src/utils/ncmpigen' make[6]: Entering directory '/build/pnetcdf-1.10.0/build-static/src/utils/ncmpigen' /bin/mkdir -p '/build/pnetcdf-1.10.0/debian/tmp//usr/bin' /bin/bash ../../../libtool --mode=install /usr/bin/install -c ncmpigen '/build/pnetcdf-1.10.0/debian/tmp//usr/bin' libtool: install: /usr/bin/install -c ncmpigen /build/pnetcdf-1.10.0/debian/tmp//usr/bin/ncmpigen /bin/mkdir -p '/build/pnetcdf-1.10.0/debian/tmp//usr/share/man/man1' /usr/bin/install -c -m 644 ../../../../src/utils/ncmpigen/ncmpigen.1 '/build/pnetcdf-1.10.0/debian/tmp//usr/share/man/man1' make[6]: Leaving directory '/build/pnetcdf-1.10.0/build-static/src/utils/ncmpigen' make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-static/src/utils/ncmpigen' Making install in ncmpidump make[5]: Entering directory '/build/pnetcdf-1.10.0/build-static/src/utils/ncmpidump' make[6]: Entering directory '/build/pnetcdf-1.10.0/build-static/src/utils/ncmpidump' /bin/mkdir -p '/build/pnetcdf-1.10.0/debian/tmp//usr/bin' /bin/bash ../../../libtool --mode=install /usr/bin/install -c ncmpidump '/build/pnetcdf-1.10.0/debian/tmp//usr/bin' libtool: install: /usr/bin/install -c ncmpidump /build/pnetcdf-1.10.0/debian/tmp//usr/bin/ncmpidump /bin/mkdir -p '/build/pnetcdf-1.10.0/debian/tmp//usr/share/man/man1' /usr/bin/install -c -m 644 ../../../../src/utils/ncmpidump/ncmpidump.1 '/build/pnetcdf-1.10.0/debian/tmp//usr/share/man/man1' make[6]: Leaving directory '/build/pnetcdf-1.10.0/build-static/src/utils/ncmpidump' make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-static/src/utils/ncmpidump' Making install in ncmpidiff make[5]: Entering directory '/build/pnetcdf-1.10.0/build-static/src/utils/ncmpidiff' make[6]: Entering directory '/build/pnetcdf-1.10.0/build-static/src/utils/ncmpidiff' /bin/mkdir -p '/build/pnetcdf-1.10.0/debian/tmp//usr/bin' /bin/bash ../../../libtool --mode=install /usr/bin/install -c ncmpidiff '/build/pnetcdf-1.10.0/debian/tmp//usr/bin' libtool: install: /usr/bin/install -c ncmpidiff /build/pnetcdf-1.10.0/debian/tmp//usr/bin/ncmpidiff /bin/mkdir -p '/build/pnetcdf-1.10.0/debian/tmp//usr/share/man/man1' /usr/bin/install -c -m 644 ../../../../src/utils/ncmpidiff/ncmpidiff.1 '/build/pnetcdf-1.10.0/debian/tmp//usr/share/man/man1' make[6]: Leaving directory '/build/pnetcdf-1.10.0/build-static/src/utils/ncmpidiff' make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-static/src/utils/ncmpidiff' Making install in ncvalidator make[5]: Entering directory '/build/pnetcdf-1.10.0/build-static/src/utils/ncvalidator' make[6]: Entering directory '/build/pnetcdf-1.10.0/build-static/src/utils/ncvalidator' /bin/mkdir -p '/build/pnetcdf-1.10.0/debian/tmp//usr/bin' /bin/bash ../../../libtool --mode=install /usr/bin/install -c ncvalidator '/build/pnetcdf-1.10.0/debian/tmp//usr/bin' libtool: install: /usr/bin/install -c ncvalidator /build/pnetcdf-1.10.0/debian/tmp//usr/bin/ncvalidator /bin/mkdir -p '/build/pnetcdf-1.10.0/debian/tmp//usr/share/man/man1' /usr/bin/install -c -m 644 ../../../../src/utils/ncvalidator/ncvalidator.1 '/build/pnetcdf-1.10.0/debian/tmp//usr/share/man/man1' make[6]: Leaving directory '/build/pnetcdf-1.10.0/build-static/src/utils/ncvalidator' make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-static/src/utils/ncvalidator' Making install in pnetcdf_version make[5]: Entering directory '/build/pnetcdf-1.10.0/build-static/src/utils/pnetcdf_version' make[6]: Entering directory '/build/pnetcdf-1.10.0/build-static/src/utils/pnetcdf_version' /bin/mkdir -p '/build/pnetcdf-1.10.0/debian/tmp//usr/bin' /bin/bash ../../../libtool --mode=install /usr/bin/install -c pnetcdf_version '/build/pnetcdf-1.10.0/debian/tmp//usr/bin' libtool: install: /usr/bin/install -c pnetcdf_version /build/pnetcdf-1.10.0/debian/tmp//usr/bin/pnetcdf_version /bin/mkdir -p '/build/pnetcdf-1.10.0/debian/tmp//usr/share/man/man1' /usr/bin/install -c -m 644 ../../../../src/utils/pnetcdf_version/pnetcdf_version.1 '/build/pnetcdf-1.10.0/debian/tmp//usr/share/man/man1' make[6]: Leaving directory '/build/pnetcdf-1.10.0/build-static/src/utils/pnetcdf_version' make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-static/src/utils/pnetcdf_version' Making install in ncoffsets make[5]: Entering directory '/build/pnetcdf-1.10.0/build-static/src/utils/ncoffsets' make[6]: Entering directory '/build/pnetcdf-1.10.0/build-static/src/utils/ncoffsets' /bin/mkdir -p '/build/pnetcdf-1.10.0/debian/tmp//usr/bin' /bin/bash ../../../libtool --mode=install /usr/bin/install -c ncoffsets '/build/pnetcdf-1.10.0/debian/tmp//usr/bin' libtool: install: /usr/bin/install -c ncoffsets /build/pnetcdf-1.10.0/debian/tmp//usr/bin/ncoffsets /bin/mkdir -p '/build/pnetcdf-1.10.0/debian/tmp//usr/share/man/man1' /usr/bin/install -c -m 644 ../../../../src/utils/ncoffsets/ncoffsets.1 '/build/pnetcdf-1.10.0/debian/tmp//usr/share/man/man1' make[6]: Leaving directory '/build/pnetcdf-1.10.0/build-static/src/utils/ncoffsets' make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-static/src/utils/ncoffsets' make[5]: Entering directory '/build/pnetcdf-1.10.0/build-static/src/utils' make[6]: Entering directory '/build/pnetcdf-1.10.0/build-static/src/utils' /bin/mkdir -p '/build/pnetcdf-1.10.0/debian/tmp//usr/bin' /usr/bin/install -c pnetcdf-config '/build/pnetcdf-1.10.0/debian/tmp//usr/bin' /usr/bin/make install-exec-hook make[7]: Entering directory '/build/pnetcdf-1.10.0/build-static/src/utils' /bin/sed -i'' -e 's|INSTALL_PREFIX|/usr|g ; s|INSTALL_EXEC_PREFIX|/usr|g' /build/pnetcdf-1.10.0/debian/tmp//usr/bin/pnetcdf-config chmod +x /build/pnetcdf-1.10.0/debian/tmp//usr/bin/pnetcdf-config make[7]: Leaving directory '/build/pnetcdf-1.10.0/build-static/src/utils' make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/build/pnetcdf-1.10.0/build-static/src/utils' make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-static/src/utils' make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-static/src/utils' make[3]: Leaving directory '/build/pnetcdf-1.10.0/build-static/src' Making install in man make[3]: Entering directory '/build/pnetcdf-1.10.0/build-static/man' make[4]: Entering directory '/build/pnetcdf-1.10.0/build-static/man' make[4]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/build/pnetcdf-1.10.0/debian/tmp//usr/share/man/man3' /usr/bin/install -c -m 644 pnetcdf.3 pnetcdf_f77.3 pnetcdf_f90.3 '/build/pnetcdf-1.10.0/debian/tmp//usr/share/man/man3' make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-static/man' make[3]: Leaving directory '/build/pnetcdf-1.10.0/build-static/man' Making install in examples make[3]: Entering directory '/build/pnetcdf-1.10.0/build-static/examples' Making install in C make[4]: Entering directory '/build/pnetcdf-1.10.0/build-static/examples/C' make[5]: Entering directory '/build/pnetcdf-1.10.0/build-static/examples/C' make[5]: Nothing to be done for 'install-exec-am'. make[5]: Nothing to be done for 'install-data-am'. make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-static/examples/C' make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-static/examples/C' Making install in tutorial make[4]: Entering directory '/build/pnetcdf-1.10.0/build-static/examples/tutorial' make[5]: Entering directory '/build/pnetcdf-1.10.0/build-static/examples/tutorial' make[5]: Nothing to be done for 'install-exec-am'. make[5]: Nothing to be done for 'install-data-am'. make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-static/examples/tutorial' make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-static/examples/tutorial' Making install in CXX make[4]: Entering directory '/build/pnetcdf-1.10.0/build-static/examples/CXX' make[5]: Entering directory '/build/pnetcdf-1.10.0/build-static/examples/CXX' make[5]: Nothing to be done for 'install-exec-am'. make[5]: Nothing to be done for 'install-data-am'. make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-static/examples/CXX' make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-static/examples/CXX' Making install in F77 make[4]: Entering directory '/build/pnetcdf-1.10.0/build-static/examples/F77' make[5]: Entering directory '/build/pnetcdf-1.10.0/build-static/examples/F77' make[5]: Nothing to be done for 'install-exec-am'. make[5]: Nothing to be done for 'install-data-am'. make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-static/examples/F77' make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-static/examples/F77' Making install in F90 make[4]: Entering directory '/build/pnetcdf-1.10.0/build-static/examples/F90' make[5]: Entering directory '/build/pnetcdf-1.10.0/build-static/examples/F90' make[5]: Nothing to be done for 'install-exec-am'. make[5]: Nothing to be done for 'install-data-am'. make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-static/examples/F90' make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-static/examples/F90' make[4]: Entering directory '/build/pnetcdf-1.10.0/build-static/examples' make[5]: Entering directory '/build/pnetcdf-1.10.0/build-static/examples' make[5]: Nothing to be done for 'install-exec-am'. make[5]: Nothing to be done for 'install-data-am'. make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-static/examples' make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-static/examples' make[3]: Leaving directory '/build/pnetcdf-1.10.0/build-static/examples' Making install in benchmarks make[3]: Entering directory '/build/pnetcdf-1.10.0/build-static/benchmarks' Making install in C make[4]: Entering directory '/build/pnetcdf-1.10.0/build-static/benchmarks/C' make[5]: Entering directory '/build/pnetcdf-1.10.0/build-static/benchmarks/C' make[5]: Nothing to be done for 'install-exec-am'. make[5]: Nothing to be done for 'install-data-am'. make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-static/benchmarks/C' make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-static/benchmarks/C' Making install in FLASH-IO make[4]: Entering directory '/build/pnetcdf-1.10.0/build-static/benchmarks/FLASH-IO' make[5]: Entering directory '/build/pnetcdf-1.10.0/build-static/benchmarks/FLASH-IO' make[5]: Nothing to be done for 'install-exec-am'. make[5]: Nothing to be done for 'install-data-am'. make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-static/benchmarks/FLASH-IO' make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-static/benchmarks/FLASH-IO' make[4]: Entering directory '/build/pnetcdf-1.10.0/build-static/benchmarks' make[5]: Entering directory '/build/pnetcdf-1.10.0/build-static/benchmarks' make[5]: Nothing to be done for 'install-exec-am'. make[5]: Nothing to be done for 'install-data-am'. make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-static/benchmarks' make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-static/benchmarks' make[3]: Leaving directory '/build/pnetcdf-1.10.0/build-static/benchmarks' Making install in test make[3]: Entering directory '/build/pnetcdf-1.10.0/build-static/test' Making install in common make[4]: Entering directory '/build/pnetcdf-1.10.0/build-static/test/common' make[5]: Entering directory '/build/pnetcdf-1.10.0/build-static/test/common' make[5]: Nothing to be done for 'install-exec-am'. make[5]: Nothing to be done for 'install-data-am'. make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-static/test/common' make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-static/test/common' Making install in C make[4]: Entering directory '/build/pnetcdf-1.10.0/build-static/test/C' make[5]: Entering directory '/build/pnetcdf-1.10.0/build-static/test/C' make[5]: Nothing to be done for 'install-exec-am'. make[5]: Nothing to be done for 'install-data-am'. make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-static/test/C' make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-static/test/C' Making install in fandc make[4]: Entering directory '/build/pnetcdf-1.10.0/build-static/test/fandc' make[5]: Entering directory '/build/pnetcdf-1.10.0/build-static/test/fandc' make[5]: Nothing to be done for 'install-exec-am'. make[5]: Nothing to be done for 'install-data-am'. make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-static/test/fandc' make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-static/test/fandc' Making install in nc_test make[4]: Entering directory '/build/pnetcdf-1.10.0/build-static/test/nc_test' /usr/bin/make install-am make[5]: Entering directory '/build/pnetcdf-1.10.0/build-static/test/nc_test' make[6]: Entering directory '/build/pnetcdf-1.10.0/build-static/test/nc_test' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/build/pnetcdf-1.10.0/build-static/test/nc_test' make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-static/test/nc_test' make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-static/test/nc_test' Making install in cdf_format make[4]: Entering directory '/build/pnetcdf-1.10.0/build-static/test/cdf_format' make[5]: Entering directory '/build/pnetcdf-1.10.0/build-static/test/cdf_format' make[5]: Nothing to be done for 'install-exec-am'. make[5]: Nothing to be done for 'install-data-am'. make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-static/test/cdf_format' make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-static/test/cdf_format' Making install in header make[4]: Entering directory '/build/pnetcdf-1.10.0/build-static/test/header' make[5]: Entering directory '/build/pnetcdf-1.10.0/build-static/test/header' make[5]: Nothing to be done for 'install-exec-am'. make[5]: Nothing to be done for 'install-data-am'. make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-static/test/header' make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-static/test/header' Making install in testcases make[4]: Entering directory '/build/pnetcdf-1.10.0/build-static/test/testcases' make[5]: Entering directory '/build/pnetcdf-1.10.0/build-static/test/testcases' make[5]: Nothing to be done for 'install-exec-am'. make[5]: Nothing to be done for 'install-data-am'. make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-static/test/testcases' make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-static/test/testcases' Making install in nonblocking make[4]: Entering directory '/build/pnetcdf-1.10.0/build-static/test/nonblocking' /usr/bin/make install-am make[5]: Entering directory '/build/pnetcdf-1.10.0/build-static/test/nonblocking' make[6]: Entering directory '/build/pnetcdf-1.10.0/build-static/test/nonblocking' make[6]: Nothing to be done for 'install-exec-am'. make[6]: Nothing to be done for 'install-data-am'. make[6]: Leaving directory '/build/pnetcdf-1.10.0/build-static/test/nonblocking' make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-static/test/nonblocking' make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-static/test/nonblocking' Making install in largefile make[4]: Entering directory '/build/pnetcdf-1.10.0/build-static/test/largefile' make[5]: Entering directory '/build/pnetcdf-1.10.0/build-static/test/largefile' make[5]: Nothing to be done for 'install-exec-am'. make[5]: Nothing to be done for 'install-data-am'. make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-static/test/largefile' make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-static/test/largefile' Making install in CXX make[4]: Entering directory '/build/pnetcdf-1.10.0/build-static/test/CXX' make[5]: Entering directory '/build/pnetcdf-1.10.0/build-static/test/CXX' make[5]: Nothing to be done for 'install-exec-am'. make[5]: Nothing to be done for 'install-data-am'. make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-static/test/CXX' make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-static/test/CXX' Making install in nf_test make[4]: Entering directory '/build/pnetcdf-1.10.0/build-static/test/nf_test' make[5]: Entering directory '/build/pnetcdf-1.10.0/build-static/test/nf_test' make[5]: Nothing to be done for 'install-exec-am'. make[5]: Nothing to be done for 'install-data-am'. make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-static/test/nf_test' make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-static/test/nf_test' Making install in nf90_test make[4]: Entering directory '/build/pnetcdf-1.10.0/build-static/test/nf90_test' make[5]: Entering directory '/build/pnetcdf-1.10.0/build-static/test/nf90_test' make[5]: Nothing to be done for 'install-exec-am'. make[5]: Nothing to be done for 'install-data-am'. make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-static/test/nf90_test' make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-static/test/nf90_test' Making install in F90 make[4]: Entering directory '/build/pnetcdf-1.10.0/build-static/test/F90' make[5]: Entering directory '/build/pnetcdf-1.10.0/build-static/test/F90' make[5]: Nothing to be done for 'install-exec-am'. make[5]: Nothing to be done for 'install-data-am'. make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-static/test/F90' make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-static/test/F90' make[4]: Entering directory '/build/pnetcdf-1.10.0/build-static/test' make[5]: Entering directory '/build/pnetcdf-1.10.0/build-static/test' make[5]: Nothing to be done for 'install-exec-am'. make[5]: Nothing to be done for 'install-data-am'. make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-static/test' make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-static/test' make[3]: Leaving directory '/build/pnetcdf-1.10.0/build-static/test' make[3]: Entering directory '/build/pnetcdf-1.10.0/build-static' make[4]: Entering directory '/build/pnetcdf-1.10.0/build-static' make[4]: Nothing to be done for 'install-exec-am'. /usr/bin/make install-data-hook make[5]: Entering directory '/build/pnetcdf-1.10.0/build-static' +----------------------------------------------------------------------------+ | | PnetCDF has been successfully installed under | /build/pnetcdf-1.10.0/debian/tmp//usr | | * PnetCDF header files have been installed in | /build/pnetcdf-1.10.0/debian/tmp//usr/include | * PnetCDF library files have been installed in | /build/pnetcdf-1.10.0/debian/tmp//usr/lib | * PnetCDF utility programs have been installed in | /build/pnetcdf-1.10.0/debian/tmp//usr/bin | * PnetCDF man pages have been installed in | /build/pnetcdf-1.10.0/debian/tmp//usr/share/man | | To compile your PnetCDF programs, please add the following to the command | line, so the compiler can find the PnetCDF header files: | -I/build/pnetcdf-1.10.0/debian/tmp//usr/include | | Add the following line to link your program to PnetCDF library: | -L/build/pnetcdf-1.10.0/debian/tmp//usr/lib -lpnetcdf | | PnetCDF is jointly developed by a team at Northwestern University and | Argonne National Laboratory. | | Visit PnetCDF web sites for more information | https://parallel-netcdf.github.io | http://cucis.ece.northwestern.edu/projects/PnetCDF | +----------------------------------------------------------------------------+ make[5]: Leaving directory '/build/pnetcdf-1.10.0/build-static' make[4]: Leaving directory '/build/pnetcdf-1.10.0/build-static' make[3]: Leaving directory '/build/pnetcdf-1.10.0/build-static' make[2]: Leaving directory '/build/pnetcdf-1.10.0/build-static' mkdir -p /build/pnetcdf-1.10.0/debian/tmp///usr/lib/x86_64-linux-gnu /build/pnetcdf-1.10.0/debian/tmp//usr/share /build/pnetcdf-1.10.0/debian/tmp///usr/include/x86_64-linux-gnu cp /build/pnetcdf-1.10.0/debian/tmp//usr/include/pnetcdf.inc /build/pnetcdf-1.10.0/debian/tmp//usr/include/pnetcdf.mod /build/pnetcdf-1.10.0/debian/tmp///usr/include/x86_64-linux-gnu cp -a build-shared/src/libs/libpnetcdf.so.0d /build/pnetcdf-1.10.0/debian/tmp///usr/lib/x86_64-linux-gnu dh_link -p libpnetcdf-dev /usr/lib/x86_64-linux-gnu/libpnetcdf.so.0d /usr/lib/x86_64-linux-gnu/libpnetcdf.so install -d debian/libpnetcdf-dev/usr/lib/x86_64-linux-gnu rm -f debian/libpnetcdf-dev/usr/lib/x86_64-linux-gnu/libpnetcdf.so ln -s libpnetcdf.so.0d debian/libpnetcdf-dev/usr/lib/x86_64-linux-gnu/libpnetcdf.so make[1]: Leaving directory '/build/pnetcdf-1.10.0' dh_install install -d debian/libpnetcdf-dev//usr/include cp --reflink=auto -a debian/tmp/usr/include/pnetcdf.h debian/libpnetcdf-dev//usr/include/ install -d debian/libpnetcdf-dev//usr/include/x86_64-linux-gnu cp --reflink=auto -a debian/tmp/usr/include/x86_64-linux-gnu/pnetcdf.inc debian/libpnetcdf-dev//usr/include/x86_64-linux-gnu/ cp --reflink=auto -a debian/tmp/usr/lib/x86_64-linux-gnu/libpnetcdf.a debian/libpnetcdf-dev//usr/lib/x86_64-linux-gnu/ install -d debian/libpnetcdf-dev//usr/share/man/man3 cp --reflink=auto -a debian/tmp/usr/share/man/man3/pnetcdf.3 debian/tmp/usr/share/man/man3/pnetcdf_f77.3 debian/tmp/usr/share/man/man3/pnetcdf_f90.3 debian/libpnetcdf-dev//usr/share/man/man3/ install -d debian/.debhelper/generated/libpnetcdf-dev install -d debian/pnetcdf-bin//usr/bin cp --reflink=auto -a debian/tmp/usr/bin/ncmpidiff debian/tmp/usr/bin/ncmpidump debian/tmp/usr/bin/ncmpigen debian/tmp/usr/bin/ncoffsets debian/tmp/usr/bin/ncvalidator debian/tmp/usr/bin/pnetcdf-config debian/tmp/usr/bin/pnetcdf_version debian/pnetcdf-bin//usr/bin/ install -d debian/pnetcdf-bin//usr/share/man cp --reflink=auto -a debian/tmp/usr/share/man/man1 debian/pnetcdf-bin//usr/share/man/ install -d debian/.debhelper/generated/pnetcdf-bin install -d debian/libpnetcdf0d//usr/lib/x86_64-linux-gnu cp --reflink=auto -a debian/tmp/usr/lib/x86_64-linux-gnu/libpnetcdf.so.0d debian/libpnetcdf0d//usr/lib/x86_64-linux-gnu/ install -d debian/.debhelper/generated/libpnetcdf0d dh_fortran_mod Fortran modfile debian/tmp/usr/include/x86_64-linux-gnu/pnetcdf.mod created by gfortran modversion 15 Fortran modfile debian/tmp/usr/include/x86_64-linux-gnu/pnetcdf.mod created by gfortran modversion 15 install -d debian/libpnetcdf-dev//usr/lib/x86_64-linux-gnu/fortran/gfortran-mod-15 cp --reflink=auto -a debian/tmp/usr/include/x86_64-linux-gnu/pnetcdf.mod debian/libpnetcdf-dev//usr/lib/x86_64-linux-gnu/fortran/gfortran-mod-15/ (grep -a -s -v Fortran-Mod debian/libpnetcdf-dev.substvars; echo Fortran-Mod=gfortran-8) > debian/libpnetcdf-dev.substvars.new mv debian/libpnetcdf-dev.substvars.new debian/libpnetcdf-dev.substvars [META] Append autosnippet "preinst-fortran-mod" to preinst [debian/libpnetcdf-dev.preinst.debhelper] [META] Append autosnippet "postrm-fortran-mod" to postrm [debian/libpnetcdf-dev.postrm.debhelper] dh_installdocs dh_installdocs: Cannot find (any matches for) "doc/*.pdf" (tried in .) install -d debian/libpnetcdf-dev/usr/share/doc/libpnetcdf-dev cp --reflink=auto -a ./CREDITS debian/libpnetcdf-dev/usr/share/doc/libpnetcdf-dev cp --reflink=auto -a ./README debian/libpnetcdf-dev/usr/share/doc/libpnetcdf-dev cp --reflink=auto -a ./RELEASE_NOTES debian/libpnetcdf-dev/usr/share/doc/libpnetcdf-dev cp --reflink=auto -a ./doc/porting_notes.txt debian/libpnetcdf-dev/usr/share/doc/libpnetcdf-dev cp --reflink=auto -a ./doc/symbol_renaming.txt debian/libpnetcdf-dev/usr/share/doc/libpnetcdf-dev chown -R 0:0 debian/libpnetcdf-dev/usr/share/doc chmod -R u\+rw,go=rX debian/libpnetcdf-dev/usr/share/doc install -p -m0644 debian/copyright debian/libpnetcdf-dev/usr/share/doc/libpnetcdf-dev/copyright install -d debian/pnetcdf-bin/usr/share/doc/pnetcdf-bin install -p -m0644 debian/copyright debian/pnetcdf-bin/usr/share/doc/pnetcdf-bin/copyright install -d debian/libpnetcdf0d/usr/share/doc/libpnetcdf0d install -p -m0644 debian/copyright debian/libpnetcdf0d/usr/share/doc/libpnetcdf0d/copyright dh_installchangelogs install -p -m0644 debian/changelog debian/libpnetcdf0d/usr/share/doc/libpnetcdf0d/changelog.Debian install -p -m0644 debian/changelog debian/pnetcdf-bin/usr/share/doc/pnetcdf-bin/changelog.Debian install -p -m0644 debian/changelog debian/libpnetcdf-dev/usr/share/doc/libpnetcdf-dev/changelog.Debian dh_installman man -l --recode UTF-8 ./debian/libpnetcdf-dev/usr/share/man/man3/pnetcdf_f90.3 > debian/libpnetcdf-dev/usr/share/man/man3/pnetcdf_f90.3.dh-new man -l --recode UTF-8 ./debian/pnetcdf-bin/usr/share/man/man1/ncmpidump.1 > debian/pnetcdf-bin/usr/share/man/man1/ncmpidump.1.dh-new man -l --recode UTF-8 ./debian/pnetcdf-bin/usr/share/man/man1/ncvalidator.1 > debian/pnetcdf-bin/usr/share/man/man1/ncvalidator.1.dh-new man -l --recode UTF-8 ./debian/pnetcdf-bin/usr/share/man/man1/pnetcdf_version.1 > debian/pnetcdf-bin/usr/share/man/man1/pnetcdf_version.1.dh-new man -l --recode UTF-8 ./debian/libpnetcdf-dev/usr/share/man/man3/pnetcdf.3 > debian/libpnetcdf-dev/usr/share/man/man3/pnetcdf.3.dh-new man -l --recode UTF-8 ./debian/pnetcdf-bin/usr/share/man/man1/ncmpigen.1 > debian/pnetcdf-bin/usr/share/man/man1/ncmpigen.1.dh-new man -l --recode UTF-8 ./debian/libpnetcdf-dev/usr/share/man/man3/pnetcdf_f77.3 > debian/libpnetcdf-dev/usr/share/man/man3/pnetcdf_f77.3.dh-new man -l --recode UTF-8 ./debian/pnetcdf-bin/usr/share/man/man1/ncoffsets.1 > debian/pnetcdf-bin/usr/share/man/man1/ncoffsets.1.dh-new man -l --recode UTF-8 ./debian/pnetcdf-bin/usr/share/man/man1/ncmpidiff.1 > debian/pnetcdf-bin/usr/share/man/man1/ncmpidiff.1.dh-new mv debian/pnetcdf-bin/usr/share/man/man1/pnetcdf_version.1.dh-new debian/pnetcdf-bin/usr/share/man/man1/pnetcdf_version.1 chmod 0644 -- debian/pnetcdf-bin/usr/share/man/man1/pnetcdf_version.1 mv debian/libpnetcdf-dev/usr/share/man/man3/pnetcdf_f90.3.dh-new debian/libpnetcdf-dev/usr/share/man/man3/pnetcdf_f90.3 chmod 0644 -- debian/libpnetcdf-dev/usr/share/man/man3/pnetcdf_f90.3 mv debian/pnetcdf-bin/usr/share/man/man1/ncmpigen.1.dh-new debian/pnetcdf-bin/usr/share/man/man1/ncmpigen.1 chmod 0644 -- debian/pnetcdf-bin/usr/share/man/man1/ncmpigen.1 mv debian/pnetcdf-bin/usr/share/man/man1/ncvalidator.1.dh-new debian/pnetcdf-bin/usr/share/man/man1/ncvalidator.1 chmod 0644 -- debian/pnetcdf-bin/usr/share/man/man1/ncvalidator.1 mv debian/pnetcdf-bin/usr/share/man/man1/ncoffsets.1.dh-new debian/pnetcdf-bin/usr/share/man/man1/ncoffsets.1 chmod 0644 -- debian/pnetcdf-bin/usr/share/man/man1/ncoffsets.1 mv debian/pnetcdf-bin/usr/share/man/man1/ncmpidump.1.dh-new debian/pnetcdf-bin/usr/share/man/man1/ncmpidump.1 chmod 0644 -- debian/pnetcdf-bin/usr/share/man/man1/ncmpidump.1 mv debian/libpnetcdf-dev/usr/share/man/man3/pnetcdf.3.dh-new debian/libpnetcdf-dev/usr/share/man/man3/pnetcdf.3 chmod 0644 -- debian/libpnetcdf-dev/usr/share/man/man3/pnetcdf.3 mv debian/pnetcdf-bin/usr/share/man/man1/ncmpidiff.1.dh-new debian/pnetcdf-bin/usr/share/man/man1/ncmpidiff.1 chmod 0644 -- debian/pnetcdf-bin/usr/share/man/man1/ncmpidiff.1 mv debian/libpnetcdf-dev/usr/share/man/man3/pnetcdf_f77.3.dh-new debian/libpnetcdf-dev/usr/share/man/man3/pnetcdf_f77.3 chmod 0644 -- debian/libpnetcdf-dev/usr/share/man/man3/pnetcdf_f77.3 dh_perl dh_link rm -f debian/libpnetcdf-dev/usr/lib/x86_64-linux-gnu/libpnetcdf.so ln -s libpnetcdf.so.0d debian/libpnetcdf-dev/usr/lib/x86_64-linux-gnu/libpnetcdf.so dh_strip_nondeterminism dh_compress cd debian/libpnetcdf-dev cd debian/libpnetcdf0d cd debian/pnetcdf-bin chmod a-x usr/share/doc/libpnetcdf0d/changelog.Debian gzip -9nf usr/share/doc/libpnetcdf0d/changelog.Debian cd '/build/pnetcdf-1.10.0' chmod a-x usr/share/doc/libpnetcdf-dev/README usr/share/doc/libpnetcdf-dev/RELEASE_NOTES usr/share/doc/libpnetcdf-dev/changelog.Debian usr/share/man/man3/pnetcdf.3 usr/share/man/man3/pnetcdf_f77.3 usr/share/man/man3/pnetcdf_f90.3 chmod a-x usr/share/doc/pnetcdf-bin/changelog.Debian usr/share/man/man1/ncmpidiff.1 usr/share/man/man1/ncmpidump.1 usr/share/man/man1/ncmpigen.1 usr/share/man/man1/ncoffsets.1 usr/share/man/man1/ncvalidator.1 usr/share/man/man1/pnetcdf_version.1 gzip -9nf usr/share/doc/libpnetcdf-dev/README usr/share/doc/libpnetcdf-dev/RELEASE_NOTES usr/share/doc/libpnetcdf-dev/changelog.Debian usr/share/man/man3/pnetcdf.3 usr/share/man/man3/pnetcdf_f77.3 usr/share/man/man3/pnetcdf_f90.3 gzip -9nf usr/share/doc/pnetcdf-bin/changelog.Debian usr/share/man/man1/ncmpidiff.1 usr/share/man/man1/ncmpidump.1 usr/share/man/man1/ncmpigen.1 usr/share/man/man1/ncoffsets.1 usr/share/man/man1/ncvalidator.1 usr/share/man/man1/pnetcdf_version.1 cd '/build/pnetcdf-1.10.0' cd '/build/pnetcdf-1.10.0' dh_fixperms find debian/libpnetcdf-dev -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/libpnetcdf0d -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/pnetcdf-bin -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/libpnetcdf0d ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/pnetcdf-bin ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/libpnetcdf-dev ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/libpnetcdf0d/usr/share/doc -type f -a -true -a ! -regex 'debian/libpnetcdf0d/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libpnetcdf0d/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/pnetcdf-bin/usr/share/doc -type f -a -true -a ! -regex 'debian/pnetcdf-bin/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libpnetcdf0d -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/pnetcdf-bin/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/libpnetcdf0d/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w find debian/pnetcdf-bin/usr/share/man -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libpnetcdf-dev/usr/share/doc -type f -a -true -a ! -regex 'debian/libpnetcdf-dev/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/pnetcdf-bin -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libpnetcdf-dev/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/libpnetcdf-dev/usr/share/man debian/libpnetcdf-dev/usr/include -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/pnetcdf-bin/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x find debian/libpnetcdf-dev -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libpnetcdf-dev/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w dh_missing dh_strip strip --strip-debug --remove-section=.comment --remove-section=.note --enable-deterministic-archives debian/libpnetcdf-dev/usr/lib/x86_64-linux-gnu/libpnetcdf.a install -d debian/.debhelper/libpnetcdf0d/dbgsym-root/usr/lib/debug/.build-id/54 objcopy --only-keep-debug --compress-debug-sections debian/libpnetcdf0d/usr/lib/x86_64-linux-gnu/libpnetcdf.so.0d debian/.debhelper/libpnetcdf0d/dbgsym-root/usr/lib/debug/.build-id/54/267cc225c84163093088196530978097a91b3f.debug install -d debian/.debhelper/pnetcdf-bin/dbgsym-root/usr/lib/debug/.build-id/5c objcopy --only-keep-debug --compress-debug-sections debian/pnetcdf-bin/usr/bin/pnetcdf_version debian/.debhelper/pnetcdf-bin/dbgsym-root/usr/lib/debug/.build-id/5c/b3ef7aadae3d7c3615d51fcbc97b51c9079798.debug chmod 0644 -- debian/.debhelper/pnetcdf-bin/dbgsym-root/usr/lib/debug/.build-id/5c/b3ef7aadae3d7c3615d51fcbc97b51c9079798.debug chown 0:0 -- debian/.debhelper/pnetcdf-bin/dbgsym-root/usr/lib/debug/.build-id/5c/b3ef7aadae3d7c3615d51fcbc97b51c9079798.debug strip --remove-section=.comment --remove-section=.note debian/pnetcdf-bin/usr/bin/pnetcdf_version objcopy --add-gnu-debuglink debian/.debhelper/pnetcdf-bin/dbgsym-root/usr/lib/debug/.build-id/5c/b3ef7aadae3d7c3615d51fcbc97b51c9079798.debug debian/pnetcdf-bin/usr/bin/pnetcdf_version install -d debian/.debhelper/pnetcdf-bin/dbgsym-root/usr/lib/debug/.build-id/61 objcopy --only-keep-debug --compress-debug-sections debian/pnetcdf-bin/usr/bin/ncvalidator debian/.debhelper/pnetcdf-bin/dbgsym-root/usr/lib/debug/.build-id/61/f003892e3e5cb7ed59d523de71bc3e258c2fd2.debug chmod 0644 -- debian/.debhelper/pnetcdf-bin/dbgsym-root/usr/lib/debug/.build-id/61/f003892e3e5cb7ed59d523de71bc3e258c2fd2.debug chown 0:0 -- debian/.debhelper/pnetcdf-bin/dbgsym-root/usr/lib/debug/.build-id/61/f003892e3e5cb7ed59d523de71bc3e258c2fd2.debug strip --remove-section=.comment --remove-section=.note debian/pnetcdf-bin/usr/bin/ncvalidator objcopy --add-gnu-debuglink debian/.debhelper/pnetcdf-bin/dbgsym-root/usr/lib/debug/.build-id/61/f003892e3e5cb7ed59d523de71bc3e258c2fd2.debug debian/pnetcdf-bin/usr/bin/ncvalidator install -d debian/.debhelper/pnetcdf-bin/dbgsym-root/usr/lib/debug/.build-id/40 objcopy --only-keep-debug --compress-debug-sections debian/pnetcdf-bin/usr/bin/ncoffsets debian/.debhelper/pnetcdf-bin/dbgsym-root/usr/lib/debug/.build-id/40/97c450cb85141fb5fb738e33ebd5ecb31b4d0e.debug chmod 0644 -- debian/.debhelper/pnetcdf-bin/dbgsym-root/usr/lib/debug/.build-id/40/97c450cb85141fb5fb738e33ebd5ecb31b4d0e.debug chown 0:0 -- debian/.debhelper/pnetcdf-bin/dbgsym-root/usr/lib/debug/.build-id/40/97c450cb85141fb5fb738e33ebd5ecb31b4d0e.debug strip --remove-section=.comment --remove-section=.note debian/pnetcdf-bin/usr/bin/ncoffsets objcopy --add-gnu-debuglink debian/.debhelper/pnetcdf-bin/dbgsym-root/usr/lib/debug/.build-id/40/97c450cb85141fb5fb738e33ebd5ecb31b4d0e.debug debian/pnetcdf-bin/usr/bin/ncoffsets install -d debian/.debhelper/pnetcdf-bin/dbgsym-root/usr/lib/debug/.build-id/ff objcopy --only-keep-debug --compress-debug-sections debian/pnetcdf-bin/usr/bin/ncmpigen debian/.debhelper/pnetcdf-bin/dbgsym-root/usr/lib/debug/.build-id/ff/aff421076ed28e26394aa851d00a24d1193fea.debug chmod 0644 -- debian/.debhelper/pnetcdf-bin/dbgsym-root/usr/lib/debug/.build-id/ff/aff421076ed28e26394aa851d00a24d1193fea.debug chown 0:0 -- debian/.debhelper/pnetcdf-bin/dbgsym-root/usr/lib/debug/.build-id/ff/aff421076ed28e26394aa851d00a24d1193fea.debug strip --remove-section=.comment --remove-section=.note debian/pnetcdf-bin/usr/bin/ncmpigen objcopy --add-gnu-debuglink debian/.debhelper/pnetcdf-bin/dbgsym-root/usr/lib/debug/.build-id/ff/aff421076ed28e26394aa851d00a24d1193fea.debug debian/pnetcdf-bin/usr/bin/ncmpigen install -d debian/.debhelper/pnetcdf-bin/dbgsym-root/usr/lib/debug/.build-id/58 objcopy --only-keep-debug --compress-debug-sections debian/pnetcdf-bin/usr/bin/ncmpidump debian/.debhelper/pnetcdf-bin/dbgsym-root/usr/lib/debug/.build-id/58/722355851a83f499b34c257823e5b4565e6425.debug chmod 0644 -- debian/.debhelper/libpnetcdf0d/dbgsym-root/usr/lib/debug/.build-id/54/267cc225c84163093088196530978097a91b3f.debug chown 0:0 -- debian/.debhelper/libpnetcdf0d/dbgsym-root/usr/lib/debug/.build-id/54/267cc225c84163093088196530978097a91b3f.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libpnetcdf0d/usr/lib/x86_64-linux-gnu/libpnetcdf.so.0d objcopy --add-gnu-debuglink debian/.debhelper/libpnetcdf0d/dbgsym-root/usr/lib/debug/.build-id/54/267cc225c84163093088196530978097a91b3f.debug debian/libpnetcdf0d/usr/lib/x86_64-linux-gnu/libpnetcdf.so.0d chmod 0644 -- debian/.debhelper/pnetcdf-bin/dbgsym-root/usr/lib/debug/.build-id/58/722355851a83f499b34c257823e5b4565e6425.debug chown 0:0 -- debian/.debhelper/pnetcdf-bin/dbgsym-root/usr/lib/debug/.build-id/58/722355851a83f499b34c257823e5b4565e6425.debug strip --remove-section=.comment --remove-section=.note debian/pnetcdf-bin/usr/bin/ncmpidump objcopy --add-gnu-debuglink debian/.debhelper/pnetcdf-bin/dbgsym-root/usr/lib/debug/.build-id/58/722355851a83f499b34c257823e5b4565e6425.debug debian/pnetcdf-bin/usr/bin/ncmpidump install -d debian/.debhelper/libpnetcdf0d/dbgsym-root/usr/share/doc ln -s libpnetcdf0d debian/.debhelper/libpnetcdf0d/dbgsym-root/usr/share/doc/libpnetcdf0d-dbgsym install -d debian/.debhelper/pnetcdf-bin/dbgsym-root/usr/lib/debug/.build-id/36 objcopy --only-keep-debug --compress-debug-sections debian/pnetcdf-bin/usr/bin/ncmpidiff debian/.debhelper/pnetcdf-bin/dbgsym-root/usr/lib/debug/.build-id/36/20fe278f0bf494b80df838baf4122a0f513e18.debug chmod 0644 -- debian/.debhelper/pnetcdf-bin/dbgsym-root/usr/lib/debug/.build-id/36/20fe278f0bf494b80df838baf4122a0f513e18.debug chown 0:0 -- debian/.debhelper/pnetcdf-bin/dbgsym-root/usr/lib/debug/.build-id/36/20fe278f0bf494b80df838baf4122a0f513e18.debug strip --remove-section=.comment --remove-section=.note debian/pnetcdf-bin/usr/bin/ncmpidiff objcopy --add-gnu-debuglink debian/.debhelper/pnetcdf-bin/dbgsym-root/usr/lib/debug/.build-id/36/20fe278f0bf494b80df838baf4122a0f513e18.debug debian/pnetcdf-bin/usr/bin/ncmpidiff install -d debian/.debhelper/pnetcdf-bin/dbgsym-root/usr/share/doc ln -s pnetcdf-bin debian/.debhelper/pnetcdf-bin/dbgsym-root/usr/share/doc/pnetcdf-bin-dbgsym dh_makeshlibs rm -f debian/libpnetcdf-dev/DEBIAN/shlibs rm -f debian/pnetcdf-bin/DEBIAN/shlibs rm -f debian/libpnetcdf0d/DEBIAN/shlibs install -d debian/libpnetcdf0d/DEBIAN echo "libpnetcdf 0d libpnetcdf0d" >> debian/libpnetcdf0d/DEBIAN/shlibs chmod 0644 -- debian/libpnetcdf0d/DEBIAN/shlibs chown 0:0 -- debian/libpnetcdf0d/DEBIAN/shlibs mv debian/.debhelper/generated/libpnetcdf0d/triggers.new debian/.debhelper/generated/libpnetcdf0d/triggers dh_shlibdeps dpkg-shlibdeps -Tdebian/libpnetcdf0d.substvars debian/libpnetcdf0d/usr/lib/x86_64-linux-gnu/libpnetcdf.so.0d install -d debian/pnetcdf-bin/DEBIAN dpkg-shlibdeps -Tdebian/pnetcdf-bin.substvars debian/pnetcdf-bin/usr/bin/ncmpidiff debian/pnetcdf-bin/usr/bin/ncmpidump debian/pnetcdf-bin/usr/bin/ncmpigen debian/pnetcdf-bin/usr/bin/ncoffsets debian/pnetcdf-bin/usr/bin/ncvalidator debian/pnetcdf-bin/usr/bin/pnetcdf_version dh_installdeb install -d debian/libpnetcdf-dev/DEBIAN printf '#!/bin/sh\nset -e\n' > debian/libpnetcdf-dev/DEBIAN/preinst cat debian/libpnetcdf-dev.preinst.debhelper >> debian/libpnetcdf-dev/DEBIAN/preinst chmod 0755 -- debian/libpnetcdf-dev/DEBIAN/preinst chown 0:0 -- debian/libpnetcdf-dev/DEBIAN/preinst printf '#!/bin/sh\nset -e\n' > debian/libpnetcdf-dev/DEBIAN/postrm cat debian/libpnetcdf-dev.postrm.debhelper >> debian/libpnetcdf-dev/DEBIAN/postrm chmod 0755 -- debian/libpnetcdf-dev/DEBIAN/postrm chown 0:0 -- debian/libpnetcdf-dev/DEBIAN/postrm install -p -m0644 debian/.debhelper/generated/libpnetcdf0d/triggers debian/libpnetcdf0d/DEBIAN/triggers dh_gencontrol echo misc:Depends= >> debian/libpnetcdf-dev.substvars echo misc:Pre-Depends= >> debian/libpnetcdf-dev.substvars dpkg-gencontrol -plibpnetcdf-dev -ldebian/changelog -Tdebian/libpnetcdf-dev.substvars -Pdebian/libpnetcdf-dev echo misc:Depends= >> debian/libpnetcdf0d.substvars echo misc:Pre-Depends= >> debian/libpnetcdf0d.substvars install -d debian/.debhelper/libpnetcdf0d/dbgsym-root/DEBIAN dpkg-gencontrol -plibpnetcdf0d -ldebian/changelog -Tdebian/libpnetcdf0d.substvars -Pdebian/.debhelper/libpnetcdf0d/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -DAuto-Built-Package=debug-symbols -DPackage=libpnetcdf0d-dbgsym "-DDepends=libpnetcdf0d (= \${binary:Version})" "-DDescription=debug symbols for libpnetcdf0d" -DBuild-Ids=54267cc225c84163093088196530978097a91b3f -DSection=debug -UReplaces -UBreaks echo misc:Depends= >> debian/pnetcdf-bin.substvars echo misc:Pre-Depends= >> debian/pnetcdf-bin.substvars install -d debian/.debhelper/pnetcdf-bin/dbgsym-root/DEBIAN dpkg-gencontrol -ppnetcdf-bin -ldebian/changelog -Tdebian/pnetcdf-bin.substvars -Pdebian/.debhelper/pnetcdf-bin/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -DAuto-Built-Package=debug-symbols -DPackage=pnetcdf-bin-dbgsym "-DDepends=pnetcdf-bin (= \${binary:Version})" "-DDescription=debug symbols for pnetcdf-bin" "-DBuild-Ids=3620fe278f0bf494b80df838baf4122a0f513e18 4097c450cb85141fb5fb738e33ebd5ecb31b4d0e 58722355851a83f499b34c257823e5b4565e6425 5cb3ef7aadae3d7c3615d51fcbc97b51c9079798 61f003892e3e5cb7ed59d523de71bc3e258c2fd2 ffaff421076ed28e26394aa851d00a24d1193fea" -DSection=debug -UReplaces -UBreaks dpkg-gencontrol: warning: unknown information field 'Fortran-Mod' in input data in package's section of control info file dpkg-gencontrol: warning: Depends field of package libpnetcdf-dev: substitution variable ${shlib:Depends} used, but is not defined chmod 0644 -- debian/.debhelper/libpnetcdf0d/dbgsym-root/DEBIAN/control chown 0:0 -- debian/.debhelper/libpnetcdf0d/dbgsym-root/DEBIAN/control dpkg-gencontrol -plibpnetcdf0d -ldebian/changelog -Tdebian/libpnetcdf0d.substvars -Pdebian/libpnetcdf0d chmod 0644 -- debian/.debhelper/pnetcdf-bin/dbgsym-root/DEBIAN/control chown 0:0 -- debian/.debhelper/pnetcdf-bin/dbgsym-root/DEBIAN/control dpkg-gencontrol -ppnetcdf-bin -ldebian/changelog -Tdebian/pnetcdf-bin.substvars -Pdebian/pnetcdf-bin dpkg-gencontrol: warning: package libpnetcdf-dev: substitution variable ${Fortran-Mod} unused, but is defined chmod 0644 -- debian/libpnetcdf-dev/DEBIAN/control chown 0:0 -- debian/libpnetcdf-dev/DEBIAN/control chmod 0644 -- debian/libpnetcdf0d/DEBIAN/control chown 0:0 -- debian/libpnetcdf0d/DEBIAN/control chmod 0644 -- debian/pnetcdf-bin/DEBIAN/control chown 0:0 -- debian/pnetcdf-bin/DEBIAN/control dh_md5sums cd debian/libpnetcdf0d >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums cd debian/pnetcdf-bin >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums cd debian/libpnetcdf-dev >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/libpnetcdf0d/DEBIAN/md5sums chown 0:0 -- debian/libpnetcdf0d/DEBIAN/md5sums chmod 0644 -- debian/pnetcdf-bin/DEBIAN/md5sums chown 0:0 -- debian/pnetcdf-bin/DEBIAN/md5sums chmod 0644 -- debian/libpnetcdf-dev/DEBIAN/md5sums chown 0:0 -- debian/libpnetcdf-dev/DEBIAN/md5sums cd debian/.debhelper/libpnetcdf0d/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums cd debian/.debhelper/pnetcdf-bin/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/.debhelper/libpnetcdf0d/dbgsym-root/DEBIAN/md5sums chown 0:0 -- debian/.debhelper/libpnetcdf0d/dbgsym-root/DEBIAN/md5sums chmod 0644 -- debian/.debhelper/pnetcdf-bin/dbgsym-root/DEBIAN/md5sums chown 0:0 -- debian/.debhelper/pnetcdf-bin/dbgsym-root/DEBIAN/md5sums dh_builddeb dpkg-deb --build debian/libpnetcdf-dev .. dpkg-deb --build debian/libpnetcdf0d .. dpkg-deb --build debian/.debhelper/libpnetcdf0d/dbgsym-root .. dpkg-deb --build debian/.debhelper/pnetcdf-bin/dbgsym-root .. dpkg-deb --build debian/pnetcdf-bin .. dpkg-deb: building package 'pnetcdf-bin' in '../pnetcdf-bin_1.10.0-3_amd64.deb'. dpkg-deb: building package 'libpnetcdf0d-dbgsym' in '../libpnetcdf0d-dbgsym_1.10.0-3_amd64.deb'. dpkg-deb: building package 'libpnetcdf0d' in '../libpnetcdf0d_1.10.0-3_amd64.deb'. dpkg-deb: building package 'pnetcdf-bin-dbgsym' in '../pnetcdf-bin-dbgsym_1.10.0-3_amd64.deb'. dpkg-deb: building package 'libpnetcdf-dev' in '../libpnetcdf-dev_1.10.0-3_amd64.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../pnetcdf_1.10.0-3_amd64.changes dpkg-genchanges: warning: unknown information field 'Fortran-Mod' in input data in package's section of control info file dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-source: warning: unknown information field 'Fortran-Mod' in input data in package's section of control info file dpkg-buildpackage: info: binary-only upload (no source included) I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/12045 and its subdirectories I: Current time: Mon Apr 5 06:38:13 -12 2021 I: pbuilder-time-stamp: 1617647893 Mon Apr 5 18:38:15 UTC 2021 I: 1st build successful. Starting 2nd build on remote node ionos5-amd64.debian.net. Mon Apr 5 18:38:15 UTC 2021 I: Preparing to do remote build '2' on ionos5-amd64.debian.net. Mon Apr 5 18:58:52 UTC 2021 I: Deleting $TMPDIR on ionos5-amd64.debian.net. Mon Apr 5 18:58:52 UTC 2021 I: pnetcdf_1.10.0-3_amd64.changes: Format: 1.8 Date: Fri, 21 Dec 2018 10:13:45 +0000 Source: pnetcdf Binary: libpnetcdf-dev libpnetcdf0d libpnetcdf0d-dbgsym pnetcdf-bin pnetcdf-bin-dbgsym Architecture: amd64 Version: 1.10.0-3 Distribution: unstable Urgency: medium Maintainer: Alastair McKinstry Changed-By: Alastair McKinstry Description: libpnetcdf-dev - Development files for the parallel netCDF library libpnetcdf0d - Libraryfor reading and writing parallel NetCDF files pnetcdf-bin - Programs for reading and writing parallel NetCDF files Changes: pnetcdf (1.10.0-3) unstable; urgency=medium . * Rebuilg against dh-fortran-mod 0.7 to fix postrm script errors Checksums-Sha1: eb8a1183755b1b95fa6d6da5f51a8e40f47c7903 760136 libpnetcdf-dev_1.10.0-3_amd64.deb ee0e5ef2813efa02eca51c2170ce2641115219a9 3898420 libpnetcdf0d-dbgsym_1.10.0-3_amd64.deb 6744a9278e5f5f29804eab3ef6509c15dee0898a 509744 libpnetcdf0d_1.10.0-3_amd64.deb c6e1984fb127f4a93b4d7beceb3f88a585bc9081 2513844 pnetcdf-bin-dbgsym_1.10.0-3_amd64.deb 98f347a558a6e806fde70d0b2f4d1826cdc4efa1 355380 pnetcdf-bin_1.10.0-3_amd64.deb 2e4453b3aad7929d9fbc1df4d8b2b4c9d807e57d 9415 pnetcdf_1.10.0-3_amd64.buildinfo Checksums-Sha256: 546e6672e5a40beca0c5bcc0cbfee3baea6e1885ae0c58ba4b330a7ee6cfabcd 760136 libpnetcdf-dev_1.10.0-3_amd64.deb 45b8fa1c31196ce75498a72d33bcd080e36b739ce8d0ac918ad11729adb8cc4a 3898420 libpnetcdf0d-dbgsym_1.10.0-3_amd64.deb c5d45a769a65d944a5a85572c255f304a986a60f692b56851da798d039c038af 509744 libpnetcdf0d_1.10.0-3_amd64.deb 3fa380746cfdeef9e24af770fd741afb34c358e18446bf5e920ada205e2388f8 2513844 pnetcdf-bin-dbgsym_1.10.0-3_amd64.deb 79b4bf49a31395ab6e2954cf132fc9226ba276e09bb835436e3ad3c3c5f9c5aa 355380 pnetcdf-bin_1.10.0-3_amd64.deb 2b91a7d3e1ec0dcba95aacf128a4e861b761828e9927dd7198322aec26adceff 9415 pnetcdf_1.10.0-3_amd64.buildinfo Files: a91f62144d8f4c85ffb7e43cff323c7d 760136 libdevel optional libpnetcdf-dev_1.10.0-3_amd64.deb 625a074a1d3d0b9af33300c63b3af0ba 3898420 debug optional libpnetcdf0d-dbgsym_1.10.0-3_amd64.deb 8dc13f11abf97e6534fc0da1d1529e3d 509744 libs optional libpnetcdf0d_1.10.0-3_amd64.deb 246a149c1128548fcb6dddc394cd34ce 2513844 debug optional pnetcdf-bin-dbgsym_1.10.0-3_amd64.deb d14bafb2ec51159dee53a29f161283bf 355380 science optional pnetcdf-bin_1.10.0-3_amd64.deb c105d0890faf7df64ea87cad3b9543c4 9415 science optional pnetcdf_1.10.0-3_amd64.buildinfo Mon Apr 5 18:58:56 UTC 2021 I: diffoscope 170 will be used to compare the two builds: # Profiling output for: /usr/bin/diffoscope --html /srv/reproducible-results/rbuild-debian/tmp.GnYpIRzQHa/pnetcdf_1.10.0-3.diffoscope.html --text /srv/reproducible-results/rbuild-debian/tmp.GnYpIRzQHa/pnetcdf_1.10.0-3.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/tmp.GnYpIRzQHa/pnetcdf_1.10.0-3.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/tmp.GnYpIRzQHa/b1/pnetcdf_1.10.0-3_amd64.changes /srv/reproducible-results/rbuild-debian/tmp.GnYpIRzQHa/b2/pnetcdf_1.10.0-3_amd64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 2.186s) 2.186s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.287s) 0.287s 10 calls diffoscope.comparators.binary.FilesystemFile 0.000s 8 calls abc.DotChangesFile Mon Apr 5 18:58:59 UTC 2021 I: diffoscope 170 found no differences in the changes files, and a .buildinfo file also exists. Mon Apr 5 18:58:59 UTC 2021 I: pnetcdf from buster built successfully and reproducibly on amd64. Mon Apr 5 18:59:01 UTC 2021 I: Submitting .buildinfo files to external archives: Mon Apr 5 18:59:01 UTC 2021 I: Submitting 12K b1/pnetcdf_1.10.0-3_amd64.buildinfo.asc Mon Apr 5 18:59:03 UTC 2021 I: Submitting 12K b2/pnetcdf_1.10.0-3_amd64.buildinfo.asc Mon Apr 5 18:59:04 UTC 2021 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Mon Apr 5 18:59:04 UTC 2021 I: Done submitting .buildinfo files. Mon Apr 5 18:59:04 UTC 2021 I: Removing signed pnetcdf_1.10.0-3_amd64.buildinfo.asc files: removed './b1/pnetcdf_1.10.0-3_amd64.buildinfo.asc' removed './b2/pnetcdf_1.10.0-3_amd64.buildinfo.asc'