Tue Aug 10 13:30:08 UTC 2021 I: starting to build chemfp/buster/amd64 on jenkins on '2021-08-10 13:30' Tue Aug 10 13:30:08 UTC 2021 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/amd64_7/66430/console.log Tue Aug 10 13:30:08 UTC 2021 I: Downloading source for buster/chemfp=1.1p1-2.1 --2021-08-10 13:30:08-- http://deb.debian.org/debian/pool/main/c/chemfp/chemfp_1.1p1-2.1.dsc Connecting to 78.137.99.97:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 1966 (1.9K) Saving to: ‘chemfp_1.1p1-2.1.dsc’ 0K . 100% 207M=0s 2021-08-10 13:30:08 (207 MB/s) - ‘chemfp_1.1p1-2.1.dsc’ saved [1966/1966] Tue Aug 10 13:30:08 UTC 2021 I: chemfp_1.1p1-2.1.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: chemfp Binary: python-chemfp Architecture: any Version: 1.1p1-2.1 Maintainer: Debichem Team Uploaders: Michael Banck Homepage: http://code.google.com/p/chem-fingerprints/ Standards-Version: 3.9.4 Vcs-Browser: http://svn.debian.org/wsvn/debichem/unstable/chemfp/ Vcs-Svn: svn://svn.debian.org/svn/debichem/unstable/chemfp Build-Depends: debhelper (>= 7.0.50~), python-all-dev (>= 2.6.6-3~), python-openbabel, python-rdkit Package-List: python-chemfp deb python optional arch=any Checksums-Sha1: 2e367cc9d14c2078ffc8ec0f2e5c0de113aaecc8 402946 chemfp_1.1p1.orig.tar.gz 480056568fad9870aae7b07fc5c7bbcf826e8d23 6544 chemfp_1.1p1-2.1.debian.tar.xz Checksums-Sha256: 1beb7d0d19eeac231d21d59446db117e2e4f0f31bb03af57a59d2ad2e672a482 402946 chemfp_1.1p1.orig.tar.gz b05dc3dab3cba01d842cb6682a9ca9aed88810504698d59ce415365f2811c8b5 6544 chemfp_1.1p1-2.1.debian.tar.xz Files: 3072c16cab93993cfb951bcd30abb6b4 402946 chemfp_1.1p1.orig.tar.gz c0308964557c0e370cc3bfcf7d6edff7 6544 chemfp_1.1p1-2.1.debian.tar.xz -----BEGIN PGP SIGNATURE----- Version: GnuPG v1 iQIcBAEBCAAGBQJUZjYXAAoJEDNi9wMaSZLh6YwQAIdLou7ENPmJCmnZCDZM83AW QBkbOGmpGG6TIZr9triiFinrZe5GchCFebaFyv0ScnUwnYnHfaRLN7l0N9l+5D+X qsn5T9O7t7yQ4yXdtnjMCTzpEXT2HkTvgOsk5aiiGjvA3m2WuRuJxHikwqMlXi/S V+hvwJguoXc85uRcfjNKfb831G89zBjinuZbmS63xortn2SRT7oQ+MS4YGqXeAlN ULz0fR3d4S+1rFS+wrumea8pbOmEt0ApCbju3STky6vErxuSwFKS6jWOhsUhgzsC 13SybBrk+qD17yqr6kO+Pikbz6uRaS4WMvRjLpUgZ5z8W+RP+fuodvR6ujx/w/oi tIk8lq/oAhIbLnxXXHY8k8NeJ780YC8WTJP33qjyH6Cq8glr7sSIJK561jk8U4mf us7AhJsBNJbhUhLoXKSjPdbmIGi27OuEOuTg0vnl/+4c6J1SMWz74o2ocWQJbJfG tX612V0nwl8wBSGyReD+0q5BKX10+bK2whJYPSjphScniuxx7lR0R590d1o1o3px xmGWBMsiwrdHfb9AT7V8s4IUDrfKO5xf9NvJtQzi9a4POFdliGWz7VW2XWb5smrp 5YzexMJpscjNwBt72YHAYhZjnkFle6Gk1lTHNWAXERX3ISh4F+bYcIrrDuUtFu6s HkjXKvzU5tZtRnhnfAVF =kX6t -----END PGP SIGNATURE----- Tue Aug 10 13:30:08 UTC 2021 I: Checking whether the package is not for us Tue Aug 10 13:30:08 UTC 2021 I: Starting 1st build on remote node ionos11-amd64.debian.net. Tue Aug 10 13:30:08 UTC 2021 I: Preparing to do remote build '1' on ionos11-amd64.debian.net. Tue Aug 10 13:31:38 UTC 2021 I: Deleting $TMPDIR on ionos11-amd64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Tue Aug 10 01:30:10 -12 2021 I: pbuilder-time-stamp: 1628602210 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/buster-reproducible-base.tgz] I: copying local configuration I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [chemfp_1.1p1-2.1.dsc] I: copying [./chemfp_1.1p1.orig.tar.gz] I: copying [./chemfp_1.1p1-2.1.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/root/.gnupg/trustedkeys.kbx': General error gpgv: Signature made Fri Nov 14 05:04:23 2014 -12 gpgv: using RSA key 3362F7031A4992E1 gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./chemfp_1.1p1-2.1.dsc dpkg-source: info: extracting chemfp in chemfp-1.1p1 dpkg-source: info: unpacking chemfp_1.1p1.orig.tar.gz dpkg-source: info: unpacking chemfp_1.1p1-2.1.debian.tar.xz I: using fakeroot in build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/32560/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='amd64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=15' DISTRIBUTION='' HOME='/root' HOST_ARCH='amd64' IFS=' ' INVOCATION_ID='e71988e0cbea4161b8db614cb3b83477' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='32560' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.kiOH0oTd82/pbuilderrc_8F3K --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/buster-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.kiOH0oTd82/b1 --logfile b1/build.log chemfp_1.1p1-2.1.dsc' SUDO_GID='111' SUDO_UID='106' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://78.137.99.97:3128' I: uname -a Linux ionos11-amd64 4.19.0-17-amd64 #1 SMP Debian 4.19.194-3 (2021-07-18) x86_64 GNU/Linux I: ls -l /bin total 5116 -rwxr-xr-x 1 root root 1168776 Apr 17 2019 bash -rwxr-xr-x 3 root root 38984 Jul 10 2019 bunzip2 -rwxr-xr-x 3 root root 38984 Jul 10 2019 bzcat lrwxrwxrwx 1 root root 6 Jul 10 2019 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2227 Jul 10 2019 bzdiff lrwxrwxrwx 1 root root 6 Jul 10 2019 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4877 Jun 24 2019 bzexe lrwxrwxrwx 1 root root 6 Jul 10 2019 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3641 Jul 10 2019 bzgrep -rwxr-xr-x 3 root root 38984 Jul 10 2019 bzip2 -rwxr-xr-x 1 root root 14328 Jul 10 2019 bzip2recover lrwxrwxrwx 1 root root 6 Jul 10 2019 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Jul 10 2019 bzmore -rwxr-xr-x 1 root root 43744 Feb 28 2019 cat -rwxr-xr-x 1 root root 64320 Feb 28 2019 chgrp -rwxr-xr-x 1 root root 64288 Feb 28 2019 chmod -rwxr-xr-x 1 root root 72512 Feb 28 2019 chown -rwxr-xr-x 1 root root 146880 Feb 28 2019 cp -rwxr-xr-x 1 root root 121464 Jan 17 2019 dash -rwxr-xr-x 1 root root 109408 Feb 28 2019 date -rwxr-xr-x 1 root root 76712 Feb 28 2019 dd -rwxr-xr-x 1 root root 93744 Feb 28 2019 df -rwxr-xr-x 1 root root 138856 Feb 28 2019 dir -rwxr-xr-x 1 root root 84288 Jan 9 2019 dmesg lrwxrwxrwx 1 root root 8 Sep 26 2018 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Sep 26 2018 domainname -> hostname -rwxr-xr-x 1 root root 39520 Feb 28 2019 echo -rwxr-xr-x 1 root root 28 Jan 7 2019 egrep -rwxr-xr-x 1 root root 35424 Feb 28 2019 false -rwxr-xr-x 1 root root 28 Jan 7 2019 fgrep -rwxr-xr-x 1 root root 68880 Jan 9 2019 findmnt -rwsr-xr-x 1 root root 34896 Apr 22 2020 fusermount -rwxr-xr-x 1 root root 198976 Jan 7 2019 grep -rwxr-xr-x 2 root root 2345 Jan 5 2019 gunzip -rwxr-xr-x 1 root root 6375 Jan 5 2019 gzexe -rwxr-xr-x 1 root root 98048 Jan 5 2019 gzip -rwxr-xr-x 1 root root 26696 Sep 26 2018 hostname -rwxr-xr-x 1 root root 68552 Feb 28 2019 ln -rwxr-xr-x 1 root root 56760 Jul 26 2018 login -rwxr-xr-x 1 root root 138856 Feb 28 2019 ls -rwxr-xr-x 1 root root 108624 Jan 9 2019 lsblk -rwxr-xr-x 1 root root 89088 Feb 28 2019 mkdir -rwxr-xr-x 1 root root 68544 Feb 28 2019 mknod -rwxr-xr-x 1 root root 43808 Feb 28 2019 mktemp -rwxr-xr-x 1 root root 43008 Jan 9 2019 more -rwsr-xr-x 1 root root 51280 Jan 9 2019 mount -rwxr-xr-x 1 root root 14408 Jan 9 2019 mountpoint -rwxr-xr-x 1 root root 138728 Feb 28 2019 mv lrwxrwxrwx 1 root root 8 Sep 26 2018 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Feb 14 2019 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 39616 Feb 28 2019 pwd lrwxrwxrwx 1 root root 4 Apr 17 2019 rbash -> bash -rwxr-xr-x 1 root root 47776 Feb 28 2019 readlink -rwxr-xr-x 1 root root 68416 Feb 28 2019 rm -rwxr-xr-x 1 root root 47776 Feb 28 2019 rmdir -rwxr-xr-x 1 root root 23312 Jan 21 2019 run-parts -rwxr-xr-x 1 root root 122224 Dec 22 2018 sed lrwxrwxrwx 1 root root 4 Aug 6 20:24 sh -> dash -rwxr-xr-x 1 root root 39552 Feb 28 2019 sleep -rwxr-xr-x 1 root root 80672 Feb 28 2019 stty -rwsr-xr-x 1 root root 63568 Jan 9 2019 su -rwxr-xr-x 1 root root 35488 Feb 28 2019 sync -rwxr-xr-x 1 root root 445560 Apr 23 2019 tar -rwxr-xr-x 1 root root 14440 Jan 21 2019 tempfile -rwxr-xr-x 1 root root 97152 Feb 28 2019 touch -rwxr-xr-x 1 root root 35424 Feb 28 2019 true -rwxr-xr-x 1 root root 14328 Apr 22 2020 ulockmgr_server -rwsr-xr-x 1 root root 34888 Jan 9 2019 umount -rwxr-xr-x 1 root root 39584 Feb 28 2019 uname -rwxr-xr-x 2 root root 2345 Jan 5 2019 uncompress -rwxr-xr-x 1 root root 138856 Feb 28 2019 vdir -rwxr-xr-x 1 root root 34896 Jan 9 2019 wdctl -rwxr-xr-x 1 root root 946 Jan 21 2019 which lrwxrwxrwx 1 root root 8 Sep 26 2018 ypdomainname -> hostname -rwxr-xr-x 1 root root 1983 Jan 5 2019 zcat -rwxr-xr-x 1 root root 1677 Jan 5 2019 zcmp -rwxr-xr-x 1 root root 5879 Jan 5 2019 zdiff -rwxr-xr-x 1 root root 29 Jan 5 2019 zegrep -rwxr-xr-x 1 root root 29 Jan 5 2019 zfgrep -rwxr-xr-x 1 root root 2080 Jan 5 2019 zforce -rwxr-xr-x 1 root root 7584 Jan 5 2019 zgrep -rwxr-xr-x 1 root root 2205 Jan 5 2019 zless -rwxr-xr-x 1 root root 1841 Jan 5 2019 zmore -rwxr-xr-x 1 root root 4552 Jan 5 2019 znew I: user script /srv/workspace/pbuilder/32560/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper (>= 7.0.50~), python-all-dev (>= 2.6.6-3~), python-openbabel, python-rdkit dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19195 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper (>= 7.0.50~); however: Package debhelper is not installed. pbuilder-satisfydepends-dummy depends on python-all-dev (>= 2.6.6-3~); however: Package python-all-dev is not installed. pbuilder-satisfydepends-dummy depends on python-openbabel; however: Package python-openbabel is not installed. pbuilder-satisfydepends-dummy depends on python-rdkit; however: Package python-rdkit is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdmainutils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-freefont-ttf{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libblas3{a} libboost-python1.67.0{a} libboost-serialization1.67.0{a} libbsd0{a} libcairo2{a} libcroco3{a} libelf1{a} libexpat1{a} libexpat1-dev{a} libfile-stripnondeterminism-perl{a} libfontconfig1{a} libfreetype6{a} libgfortran5{a} libglib2.0-0{a} libicu63{a} liblapack3{a} libmagic-mgc{a} libmagic1{a} libncurses6{a} libopenbabel5{a} libpipeline1{a} libpixman-1-0{a} libpng16-16{a} libpython-all-dev{a} libpython-dev{a} libpython-stdlib{a} libpython2-dev{a} libpython2-stdlib{a} libpython2.7{a} libpython2.7-dev{a} libpython2.7-minimal{a} libpython2.7-stdlib{a} librdkit1{a} libreadline7{a} libschroedinger-coordgenlibs1{a} libschroedinger-maeparser1{a} libsigsegv2{a} libssl1.1{a} libtool{a} libuchardet0{a} libx11-6{a} libx11-data{a} libxau6{a} libxcb-render0{a} libxcb-shm0{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxml2{a} libxrender1{a} m4{a} man-db{a} mime-support{a} po-debconf{a} python{a} python-all{a} python-all-dev{a} python-dev{a} python-minimal{a} python-numpy{a} python-openbabel{a} python-pkg-resources{a} python-rdkit{a} python2{a} python2-dev{a} python2-minimal{a} python2.7{a} python2.7-dev{a} python2.7-minimal{a} rdkit-data{a} readline-common{a} sensible-utils{a} ucf{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libglib2.0-data libgpm2 libltdl-dev libmail-sendmail-perl lynx shared-mime-info wget xdg-user-dirs 0 packages upgraded, 91 newly installed, 0 to remove and 0 not upgraded. Need to get 89.8 MB of archives. After unpacking 263 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian buster/main amd64 libbsd0 amd64 0.9.1-2+deb10u1 [99.5 kB] Get: 2 http://deb.debian.org/debian buster/main amd64 bsdmainutils amd64 11.1.2+b1 [191 kB] Get: 3 http://deb.debian.org/debian buster/main amd64 libuchardet0 amd64 0.0.6-3 [64.9 kB] Get: 4 http://deb.debian.org/debian buster/main amd64 groff-base amd64 1.22.4-3+deb10u1 [916 kB] Get: 5 http://deb.debian.org/debian buster/main amd64 libpipeline1 amd64 1.5.1-2 [31.2 kB] Get: 6 http://deb.debian.org/debian buster/main amd64 man-db amd64 2.8.5-2 [1274 kB] Get: 7 http://deb.debian.org/debian buster/main amd64 libpython2.7-minimal amd64 2.7.16-2+deb10u1 [395 kB] Get: 8 http://deb.debian.org/debian buster/main amd64 python2.7-minimal amd64 2.7.16-2+deb10u1 [1369 kB] Get: 9 http://deb.debian.org/debian buster/main amd64 python2-minimal amd64 2.7.16-1 [41.4 kB] Get: 10 http://deb.debian.org/debian buster/main amd64 python-minimal amd64 2.7.16-1 [21.0 kB] Get: 11 http://deb.debian.org/debian buster/main amd64 libssl1.1 amd64 1.1.1d-0+deb10u6 [1539 kB] Get: 12 http://deb.debian.org/debian buster/main amd64 mime-support all 3.62 [37.2 kB] Get: 13 http://deb.debian.org/debian buster/main amd64 libexpat1 amd64 2.2.6-2+deb10u1 [106 kB] Get: 14 http://deb.debian.org/debian buster/main amd64 readline-common all 7.0-5 [70.6 kB] Get: 15 http://deb.debian.org/debian buster/main amd64 libreadline7 amd64 7.0-5 [151 kB] Get: 16 http://deb.debian.org/debian buster/main amd64 libpython2.7-stdlib amd64 2.7.16-2+deb10u1 [1912 kB] Get: 17 http://deb.debian.org/debian buster/main amd64 python2.7 amd64 2.7.16-2+deb10u1 [305 kB] Get: 18 http://deb.debian.org/debian buster/main amd64 libpython2-stdlib amd64 2.7.16-1 [20.8 kB] Get: 19 http://deb.debian.org/debian buster/main amd64 libpython-stdlib amd64 2.7.16-1 [20.8 kB] Get: 20 http://deb.debian.org/debian buster/main amd64 python2 amd64 2.7.16-1 [41.6 kB] Get: 21 http://deb.debian.org/debian buster/main amd64 python amd64 2.7.16-1 [22.8 kB] Get: 22 http://deb.debian.org/debian buster/main amd64 sensible-utils all 0.0.12 [15.8 kB] Get: 23 http://deb.debian.org/debian buster/main amd64 libmagic-mgc amd64 1:5.35-4+deb10u2 [242 kB] Get: 24 http://deb.debian.org/debian buster/main amd64 libmagic1 amd64 1:5.35-4+deb10u2 [118 kB] Get: 25 http://deb.debian.org/debian buster/main amd64 file amd64 1:5.35-4+deb10u2 [66.4 kB] Get: 26 http://deb.debian.org/debian buster/main amd64 gettext-base amd64 0.19.8.1-9 [123 kB] Get: 27 http://deb.debian.org/debian buster/main amd64 ucf all 3.0038+nmu1 [69.0 kB] Get: 28 http://deb.debian.org/debian buster/main amd64 libsigsegv2 amd64 2.12-2 [32.8 kB] Get: 29 http://deb.debian.org/debian buster/main amd64 m4 amd64 1.4.18-2 [203 kB] Get: 30 http://deb.debian.org/debian buster/main amd64 autoconf all 2.69-11 [341 kB] Get: 31 http://deb.debian.org/debian buster/main amd64 autotools-dev all 20180224.1 [77.0 kB] Get: 32 http://deb.debian.org/debian buster/main amd64 automake all 1:1.16.1-4 [771 kB] Get: 33 http://deb.debian.org/debian buster/main amd64 autopoint all 0.19.8.1-9 [434 kB] Get: 34 http://deb.debian.org/debian buster/main amd64 libtool all 2.4.6-9 [547 kB] Get: 35 http://deb.debian.org/debian buster/main amd64 dh-autoreconf all 19 [16.9 kB] Get: 36 http://deb.debian.org/debian buster/main amd64 libarchive-zip-perl all 1.64-1 [96.8 kB] Get: 37 http://deb.debian.org/debian buster/main amd64 libfile-stripnondeterminism-perl all 1.1.2-1 [19.8 kB] Get: 38 http://deb.debian.org/debian buster/main amd64 dh-strip-nondeterminism all 1.1.2-1 [13.0 kB] Get: 39 http://deb.debian.org/debian buster/main amd64 libelf1 amd64 0.176-1.1 [161 kB] Get: 40 http://deb.debian.org/debian buster/main amd64 dwz amd64 0.12-3 [78.0 kB] Get: 41 http://deb.debian.org/debian buster/main amd64 libglib2.0-0 amd64 2.58.3-2+deb10u3 [1259 kB] Get: 42 http://deb.debian.org/debian buster/main amd64 libicu63 amd64 63.1-6+deb10u1 [8300 kB] Get: 43 http://deb.debian.org/debian buster/main amd64 libxml2 amd64 2.9.4+dfsg1-7+deb10u2 [689 kB] Get: 44 http://deb.debian.org/debian buster/main amd64 libcroco3 amd64 0.6.12-3 [145 kB] Get: 45 http://deb.debian.org/debian buster/main amd64 libncurses6 amd64 6.1+20181013-2+deb10u2 [102 kB] Get: 46 http://deb.debian.org/debian buster/main amd64 gettext amd64 0.19.8.1-9 [1303 kB] Get: 47 http://deb.debian.org/debian buster/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get: 48 http://deb.debian.org/debian buster/main amd64 po-debconf all 1.0.21 [248 kB] Get: 49 http://deb.debian.org/debian buster/main amd64 debhelper all 12.1.1 [1016 kB] Get: 50 http://deb.debian.org/debian buster/main amd64 fonts-dejavu-core all 2.37-1 [1068 kB] Get: 51 http://deb.debian.org/debian buster/main amd64 fontconfig-config all 2.13.1-2 [280 kB] Get: 52 http://deb.debian.org/debian buster/main amd64 fonts-freefont-ttf all 20120503-9 [4319 kB] Get: 53 http://deb.debian.org/debian buster/main amd64 libgfortran5 amd64 8.3.0-6 [581 kB] Get: 54 http://deb.debian.org/debian buster/main amd64 libblas3 amd64 3.8.0-2 [148 kB] Get: 55 http://deb.debian.org/debian buster/main amd64 libboost-python1.67.0 amd64 1.67.0-13+deb10u1 [328 kB] Get: 56 http://deb.debian.org/debian buster/main amd64 libboost-serialization1.67.0 amd64 1.67.0-13+deb10u1 [319 kB] Get: 57 http://deb.debian.org/debian buster/main amd64 libpng16-16 amd64 1.6.36-6 [292 kB] Get: 58 http://deb.debian.org/debian buster/main amd64 libfreetype6 amd64 2.9.1-3+deb10u2 [380 kB] Get: 59 http://deb.debian.org/debian buster/main amd64 libfontconfig1 amd64 2.13.1-2 [346 kB] Get: 60 http://deb.debian.org/debian buster/main amd64 libpixman-1-0 amd64 0.36.0-1 [537 kB] Get: 61 http://deb.debian.org/debian buster/main amd64 libxau6 amd64 1:1.0.8-1+b2 [19.9 kB] Get: 62 http://deb.debian.org/debian buster/main amd64 libxdmcp6 amd64 1:1.1.2-3 [26.3 kB] Get: 63 http://deb.debian.org/debian buster/main amd64 libxcb1 amd64 1.13.1-2 [137 kB] Get: 64 http://deb.debian.org/debian buster/main amd64 libx11-data all 2:1.6.7-1+deb10u2 [299 kB] Get: 65 http://deb.debian.org/debian buster/main amd64 libx11-6 amd64 2:1.6.7-1+deb10u2 [757 kB] Get: 66 http://deb.debian.org/debian buster/main amd64 libxcb-render0 amd64 1.13.1-2 [109 kB] Get: 67 http://deb.debian.org/debian buster/main amd64 libxcb-shm0 amd64 1.13.1-2 [99.2 kB] Get: 68 http://deb.debian.org/debian buster/main amd64 libxext6 amd64 2:1.3.3-1+b2 [52.5 kB] Get: 69 http://deb.debian.org/debian buster/main amd64 libxrender1 amd64 1:0.9.10-1 [33.0 kB] Get: 70 http://deb.debian.org/debian buster/main amd64 libcairo2 amd64 1.16.0-4+deb10u1 [688 kB] Get: 71 http://deb.debian.org/debian buster/main amd64 libexpat1-dev amd64 2.2.6-2+deb10u1 [153 kB] Get: 72 http://deb.debian.org/debian buster/main amd64 liblapack3 amd64 3.8.0-2 [2110 kB] Get: 73 http://deb.debian.org/debian buster/main amd64 libopenbabel5 amd64 2.4.1+dfsg-3 [3003 kB] Get: 74 http://deb.debian.org/debian buster/main amd64 libpython2.7 amd64 2.7.16-2+deb10u1 [1036 kB] Get: 75 http://deb.debian.org/debian buster/main amd64 libpython2.7-dev amd64 2.7.16-2+deb10u1 [31.6 MB] Get: 76 http://deb.debian.org/debian buster/main amd64 libpython2-dev amd64 2.7.16-1 [20.9 kB] Get: 77 http://deb.debian.org/debian buster/main amd64 libpython-dev amd64 2.7.16-1 [20.9 kB] Get: 78 http://deb.debian.org/debian buster/main amd64 libpython-all-dev amd64 2.7.16-1 [1064 B] Get: 79 http://deb.debian.org/debian buster/main amd64 libschroedinger-maeparser1 amd64 1.0.1-4 [45.1 kB] Get: 80 http://deb.debian.org/debian buster/main amd64 libschroedinger-coordgenlibs1 amd64 1.1-3 [177 kB] Get: 81 http://deb.debian.org/debian buster/main amd64 librdkit1 amd64 201809.1+dfsg-6 [2773 kB] Get: 82 http://deb.debian.org/debian buster/main amd64 python-all amd64 2.7.16-1 [1044 B] Get: 83 http://deb.debian.org/debian buster/main amd64 python2.7-dev amd64 2.7.16-2+deb10u1 [294 kB] Get: 84 http://deb.debian.org/debian buster/main amd64 python2-dev amd64 2.7.16-1 [1212 B] Get: 85 http://deb.debian.org/debian buster/main amd64 python-dev amd64 2.7.16-1 [1192 B] Get: 86 http://deb.debian.org/debian buster/main amd64 python-all-dev amd64 2.7.16-1 [1068 B] Get: 87 http://deb.debian.org/debian buster/main amd64 python-pkg-resources all 40.8.0-1 [182 kB] Get: 88 http://deb.debian.org/debian buster/main amd64 python-numpy amd64 1:1.16.2-1 [2101 kB] Get: 89 http://deb.debian.org/debian buster/main amd64 python-openbabel amd64 2.4.1+dfsg-3 [662 kB] Get: 90 http://deb.debian.org/debian buster/main amd64 rdkit-data all 201809.1+dfsg-6 [6771 kB] Get: 91 http://deb.debian.org/debian buster/main amd64 python-rdkit amd64 201809.1+dfsg-6 [2940 kB] Fetched 89.8 MB in 2s (57.7 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libbsd0:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19195 files and directories currently installed.) Preparing to unpack .../00-libbsd0_0.9.1-2+deb10u1_amd64.deb ... Unpacking libbsd0:amd64 (0.9.1-2+deb10u1) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../01-bsdmainutils_11.1.2+b1_amd64.deb ... Unpacking bsdmainutils (11.1.2+b1) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../02-libuchardet0_0.0.6-3_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.6-3) ... Selecting previously unselected package groff-base. Preparing to unpack .../03-groff-base_1.22.4-3+deb10u1_amd64.deb ... Unpacking groff-base (1.22.4-3+deb10u1) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../04-libpipeline1_1.5.1-2_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.1-2) ... Selecting previously unselected package man-db. Preparing to unpack .../05-man-db_2.8.5-2_amd64.deb ... Unpacking man-db (2.8.5-2) ... Selecting previously unselected package libpython2.7-minimal:amd64. Preparing to unpack .../06-libpython2.7-minimal_2.7.16-2+deb10u1_amd64.deb ... Unpacking libpython2.7-minimal:amd64 (2.7.16-2+deb10u1) ... Selecting previously unselected package python2.7-minimal. Preparing to unpack .../07-python2.7-minimal_2.7.16-2+deb10u1_amd64.deb ... Unpacking python2.7-minimal (2.7.16-2+deb10u1) ... Selecting previously unselected package python2-minimal. Preparing to unpack .../08-python2-minimal_2.7.16-1_amd64.deb ... Unpacking python2-minimal (2.7.16-1) ... Selecting previously unselected package python-minimal. Preparing to unpack .../09-python-minimal_2.7.16-1_amd64.deb ... Unpacking python-minimal (2.7.16-1) ... Selecting previously unselected package libssl1.1:amd64. Preparing to unpack .../10-libssl1.1_1.1.1d-0+deb10u6_amd64.deb ... Unpacking libssl1.1:amd64 (1.1.1d-0+deb10u6) ... Selecting previously unselected package mime-support. Preparing to unpack .../11-mime-support_3.62_all.deb ... Unpacking mime-support (3.62) ... Selecting previously unselected package libexpat1:amd64. Preparing to unpack .../12-libexpat1_2.2.6-2+deb10u1_amd64.deb ... Unpacking libexpat1:amd64 (2.2.6-2+deb10u1) ... Selecting previously unselected package readline-common. Preparing to unpack .../13-readline-common_7.0-5_all.deb ... Unpacking readline-common (7.0-5) ... Selecting previously unselected package libreadline7:amd64. Preparing to unpack .../14-libreadline7_7.0-5_amd64.deb ... Unpacking libreadline7:amd64 (7.0-5) ... Selecting previously unselected package libpython2.7-stdlib:amd64. Preparing to unpack .../15-libpython2.7-stdlib_2.7.16-2+deb10u1_amd64.deb ... Unpacking libpython2.7-stdlib:amd64 (2.7.16-2+deb10u1) ... Selecting previously unselected package python2.7. Preparing to unpack .../16-python2.7_2.7.16-2+deb10u1_amd64.deb ... Unpacking python2.7 (2.7.16-2+deb10u1) ... Selecting previously unselected package libpython2-stdlib:amd64. Preparing to unpack .../17-libpython2-stdlib_2.7.16-1_amd64.deb ... Unpacking libpython2-stdlib:amd64 (2.7.16-1) ... Selecting previously unselected package libpython-stdlib:amd64. Preparing to unpack .../18-libpython-stdlib_2.7.16-1_amd64.deb ... Unpacking libpython-stdlib:amd64 (2.7.16-1) ... Setting up libpython2.7-minimal:amd64 (2.7.16-2+deb10u1) ... Setting up python2.7-minimal (2.7.16-2+deb10u1) ... Setting up python2-minimal (2.7.16-1) ... Selecting previously unselected package python2. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20658 files and directories currently installed.) Preparing to unpack .../python2_2.7.16-1_amd64.deb ... Unpacking python2 (2.7.16-1) ... Setting up python-minimal (2.7.16-1) ... Selecting previously unselected package python. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20691 files and directories currently installed.) Preparing to unpack .../00-python_2.7.16-1_amd64.deb ... Unpacking python (2.7.16-1) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../01-sensible-utils_0.0.12_all.deb ... Unpacking sensible-utils (0.0.12) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../02-libmagic-mgc_1%3a5.35-4+deb10u2_amd64.deb ... Unpacking libmagic-mgc (1:5.35-4+deb10u2) ... Selecting previously unselected package libmagic1:amd64. Preparing to unpack .../03-libmagic1_1%3a5.35-4+deb10u2_amd64.deb ... Unpacking libmagic1:amd64 (1:5.35-4+deb10u2) ... Selecting previously unselected package file. Preparing to unpack .../04-file_1%3a5.35-4+deb10u2_amd64.deb ... Unpacking file (1:5.35-4+deb10u2) ... Selecting previously unselected package gettext-base. Preparing to unpack .../05-gettext-base_0.19.8.1-9_amd64.deb ... Unpacking gettext-base (0.19.8.1-9) ... Selecting previously unselected package ucf. Preparing to unpack .../06-ucf_3.0038+nmu1_all.deb ... Moving old data out of the way Unpacking ucf (3.0038+nmu1) ... Selecting previously unselected package libsigsegv2:amd64. Preparing to unpack .../07-libsigsegv2_2.12-2_amd64.deb ... Unpacking libsigsegv2:amd64 (2.12-2) ... Selecting previously unselected package m4. Preparing to unpack .../08-m4_1.4.18-2_amd64.deb ... Unpacking m4 (1.4.18-2) ... Selecting previously unselected package autoconf. Preparing to unpack .../09-autoconf_2.69-11_all.deb ... Unpacking autoconf (2.69-11) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../10-autotools-dev_20180224.1_all.deb ... Unpacking autotools-dev (20180224.1) ... Selecting previously unselected package automake. Preparing to unpack .../11-automake_1%3a1.16.1-4_all.deb ... Unpacking automake (1:1.16.1-4) ... Selecting previously unselected package autopoint. Preparing to unpack .../12-autopoint_0.19.8.1-9_all.deb ... Unpacking autopoint (0.19.8.1-9) ... Selecting previously unselected package libtool. Preparing to unpack .../13-libtool_2.4.6-9_all.deb ... Unpacking libtool (2.4.6-9) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../14-dh-autoreconf_19_all.deb ... Unpacking dh-autoreconf (19) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../15-libarchive-zip-perl_1.64-1_all.deb ... Unpacking libarchive-zip-perl (1.64-1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../16-libfile-stripnondeterminism-perl_1.1.2-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.1.2-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../17-dh-strip-nondeterminism_1.1.2-1_all.deb ... Unpacking dh-strip-nondeterminism (1.1.2-1) ... Selecting previously unselected package libelf1:amd64. Preparing to unpack .../18-libelf1_0.176-1.1_amd64.deb ... Unpacking libelf1:amd64 (0.176-1.1) ... Selecting previously unselected package dwz. Preparing to unpack .../19-dwz_0.12-3_amd64.deb ... Unpacking dwz (0.12-3) ... Selecting previously unselected package libglib2.0-0:amd64. Preparing to unpack .../20-libglib2.0-0_2.58.3-2+deb10u3_amd64.deb ... Unpacking libglib2.0-0:amd64 (2.58.3-2+deb10u3) ... Selecting previously unselected package libicu63:amd64. Preparing to unpack .../21-libicu63_63.1-6+deb10u1_amd64.deb ... Unpacking libicu63:amd64 (63.1-6+deb10u1) ... Selecting previously unselected package libxml2:amd64. Preparing to unpack .../22-libxml2_2.9.4+dfsg1-7+deb10u2_amd64.deb ... Unpacking libxml2:amd64 (2.9.4+dfsg1-7+deb10u2) ... Selecting previously unselected package libcroco3:amd64. Preparing to unpack .../23-libcroco3_0.6.12-3_amd64.deb ... Unpacking libcroco3:amd64 (0.6.12-3) ... Selecting previously unselected package libncurses6:amd64. Preparing to unpack .../24-libncurses6_6.1+20181013-2+deb10u2_amd64.deb ... Unpacking libncurses6:amd64 (6.1+20181013-2+deb10u2) ... Selecting previously unselected package gettext. Preparing to unpack .../25-gettext_0.19.8.1-9_amd64.deb ... Unpacking gettext (0.19.8.1-9) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../26-intltool-debian_0.35.0+20060710.5_all.deb ... Unpacking intltool-debian (0.35.0+20060710.5) ... Selecting previously unselected package po-debconf. Preparing to unpack .../27-po-debconf_1.0.21_all.deb ... Unpacking po-debconf (1.0.21) ... Selecting previously unselected package debhelper. Preparing to unpack .../28-debhelper_12.1.1_all.deb ... Unpacking debhelper (12.1.1) ... Selecting previously unselected package fonts-dejavu-core. Preparing to unpack .../29-fonts-dejavu-core_2.37-1_all.deb ... Unpacking fonts-dejavu-core (2.37-1) ... Selecting previously unselected package fontconfig-config. Preparing to unpack .../30-fontconfig-config_2.13.1-2_all.deb ... Unpacking fontconfig-config (2.13.1-2) ... Selecting previously unselected package fonts-freefont-ttf. Preparing to unpack .../31-fonts-freefont-ttf_20120503-9_all.deb ... Unpacking fonts-freefont-ttf (20120503-9) ... Selecting previously unselected package libgfortran5:amd64. Preparing to unpack .../32-libgfortran5_8.3.0-6_amd64.deb ... Unpacking libgfortran5:amd64 (8.3.0-6) ... Selecting previously unselected package libblas3:amd64. Preparing to unpack .../33-libblas3_3.8.0-2_amd64.deb ... Unpacking libblas3:amd64 (3.8.0-2) ... Selecting previously unselected package libboost-python1.67.0. Preparing to unpack .../34-libboost-python1.67.0_1.67.0-13+deb10u1_amd64.deb ... Unpacking libboost-python1.67.0 (1.67.0-13+deb10u1) ... Selecting previously unselected package libboost-serialization1.67.0:amd64. Preparing to unpack .../35-libboost-serialization1.67.0_1.67.0-13+deb10u1_amd64.deb ... Unpacking libboost-serialization1.67.0:amd64 (1.67.0-13+deb10u1) ... Selecting previously unselected package libpng16-16:amd64. Preparing to unpack .../36-libpng16-16_1.6.36-6_amd64.deb ... Unpacking libpng16-16:amd64 (1.6.36-6) ... Selecting previously unselected package libfreetype6:amd64. Preparing to unpack .../37-libfreetype6_2.9.1-3+deb10u2_amd64.deb ... Unpacking libfreetype6:amd64 (2.9.1-3+deb10u2) ... Selecting previously unselected package libfontconfig1:amd64. Preparing to unpack .../38-libfontconfig1_2.13.1-2_amd64.deb ... Unpacking libfontconfig1:amd64 (2.13.1-2) ... Selecting previously unselected package libpixman-1-0:amd64. Preparing to unpack .../39-libpixman-1-0_0.36.0-1_amd64.deb ... Unpacking libpixman-1-0:amd64 (0.36.0-1) ... Selecting previously unselected package libxau6:amd64. Preparing to unpack .../40-libxau6_1%3a1.0.8-1+b2_amd64.deb ... Unpacking libxau6:amd64 (1:1.0.8-1+b2) ... Selecting previously unselected package libxdmcp6:amd64. Preparing to unpack .../41-libxdmcp6_1%3a1.1.2-3_amd64.deb ... Unpacking libxdmcp6:amd64 (1:1.1.2-3) ... Selecting previously unselected package libxcb1:amd64. Preparing to unpack .../42-libxcb1_1.13.1-2_amd64.deb ... Unpacking libxcb1:amd64 (1.13.1-2) ... Selecting previously unselected package libx11-data. Preparing to unpack .../43-libx11-data_2%3a1.6.7-1+deb10u2_all.deb ... Unpacking libx11-data (2:1.6.7-1+deb10u2) ... Selecting previously unselected package libx11-6:amd64. Preparing to unpack .../44-libx11-6_2%3a1.6.7-1+deb10u2_amd64.deb ... Unpacking libx11-6:amd64 (2:1.6.7-1+deb10u2) ... Selecting previously unselected package libxcb-render0:amd64. Preparing to unpack .../45-libxcb-render0_1.13.1-2_amd64.deb ... Unpacking libxcb-render0:amd64 (1.13.1-2) ... Selecting previously unselected package libxcb-shm0:amd64. Preparing to unpack .../46-libxcb-shm0_1.13.1-2_amd64.deb ... Unpacking libxcb-shm0:amd64 (1.13.1-2) ... Selecting previously unselected package libxext6:amd64. Preparing to unpack .../47-libxext6_2%3a1.3.3-1+b2_amd64.deb ... Unpacking libxext6:amd64 (2:1.3.3-1+b2) ... Selecting previously unselected package libxrender1:amd64. Preparing to unpack .../48-libxrender1_1%3a0.9.10-1_amd64.deb ... Unpacking libxrender1:amd64 (1:0.9.10-1) ... Selecting previously unselected package libcairo2:amd64. Preparing to unpack .../49-libcairo2_1.16.0-4+deb10u1_amd64.deb ... Unpacking libcairo2:amd64 (1.16.0-4+deb10u1) ... Selecting previously unselected package libexpat1-dev:amd64. Preparing to unpack .../50-libexpat1-dev_2.2.6-2+deb10u1_amd64.deb ... Unpacking libexpat1-dev:amd64 (2.2.6-2+deb10u1) ... Selecting previously unselected package liblapack3:amd64. Preparing to unpack .../51-liblapack3_3.8.0-2_amd64.deb ... Unpacking liblapack3:amd64 (3.8.0-2) ... Selecting previously unselected package libopenbabel5. Preparing to unpack .../52-libopenbabel5_2.4.1+dfsg-3_amd64.deb ... Unpacking libopenbabel5 (2.4.1+dfsg-3) ... Selecting previously unselected package libpython2.7:amd64. Preparing to unpack .../53-libpython2.7_2.7.16-2+deb10u1_amd64.deb ... Unpacking libpython2.7:amd64 (2.7.16-2+deb10u1) ... Selecting previously unselected package libpython2.7-dev:amd64. Preparing to unpack .../54-libpython2.7-dev_2.7.16-2+deb10u1_amd64.deb ... Unpacking libpython2.7-dev:amd64 (2.7.16-2+deb10u1) ... Selecting previously unselected package libpython2-dev:amd64. Preparing to unpack .../55-libpython2-dev_2.7.16-1_amd64.deb ... Unpacking libpython2-dev:amd64 (2.7.16-1) ... Selecting previously unselected package libpython-dev:amd64. Preparing to unpack .../56-libpython-dev_2.7.16-1_amd64.deb ... Unpacking libpython-dev:amd64 (2.7.16-1) ... Selecting previously unselected package libpython-all-dev:amd64. Preparing to unpack .../57-libpython-all-dev_2.7.16-1_amd64.deb ... Unpacking libpython-all-dev:amd64 (2.7.16-1) ... Selecting previously unselected package libschroedinger-maeparser1:amd64. Preparing to unpack .../58-libschroedinger-maeparser1_1.0.1-4_amd64.deb ... Unpacking libschroedinger-maeparser1:amd64 (1.0.1-4) ... Selecting previously unselected package libschroedinger-coordgenlibs1:amd64. Preparing to unpack .../59-libschroedinger-coordgenlibs1_1.1-3_amd64.deb ... Unpacking libschroedinger-coordgenlibs1:amd64 (1.1-3) ... Selecting previously unselected package librdkit1. Preparing to unpack .../60-librdkit1_201809.1+dfsg-6_amd64.deb ... Unpacking librdkit1 (201809.1+dfsg-6) ... Selecting previously unselected package python-all. Preparing to unpack .../61-python-all_2.7.16-1_amd64.deb ... Unpacking python-all (2.7.16-1) ... Selecting previously unselected package python2.7-dev. Preparing to unpack .../62-python2.7-dev_2.7.16-2+deb10u1_amd64.deb ... Unpacking python2.7-dev (2.7.16-2+deb10u1) ... Selecting previously unselected package python2-dev. Preparing to unpack .../63-python2-dev_2.7.16-1_amd64.deb ... Unpacking python2-dev (2.7.16-1) ... Selecting previously unselected package python-dev. Preparing to unpack .../64-python-dev_2.7.16-1_amd64.deb ... Unpacking python-dev (2.7.16-1) ... Selecting previously unselected package python-all-dev. Preparing to unpack .../65-python-all-dev_2.7.16-1_amd64.deb ... Unpacking python-all-dev (2.7.16-1) ... Selecting previously unselected package python-pkg-resources. Preparing to unpack .../66-python-pkg-resources_40.8.0-1_all.deb ... Unpacking python-pkg-resources (40.8.0-1) ... Selecting previously unselected package python-numpy. Preparing to unpack .../67-python-numpy_1%3a1.16.2-1_amd64.deb ... Unpacking python-numpy (1:1.16.2-1) ... Selecting previously unselected package python-openbabel. Preparing to unpack .../68-python-openbabel_2.4.1+dfsg-3_amd64.deb ... Unpacking python-openbabel (2.4.1+dfsg-3) ... Selecting previously unselected package rdkit-data. Preparing to unpack .../69-rdkit-data_201809.1+dfsg-6_all.deb ... Unpacking rdkit-data (201809.1+dfsg-6) ... Selecting previously unselected package python-rdkit. Preparing to unpack .../70-python-rdkit_201809.1+dfsg-6_amd64.deb ... Unpacking python-rdkit (201809.1+dfsg-6) ... Setting up libexpat1:amd64 (2.2.6-2+deb10u1) ... Setting up libpipeline1:amd64 (1.5.1-2) ... Setting up libpixman-1-0:amd64 (0.36.0-1) ... Setting up libxau6:amd64 (1:1.0.8-1+b2) ... Setting up mime-support (3.62) ... Setting up libmagic-mgc (1:5.35-4+deb10u2) ... Setting up libarchive-zip-perl (1.64-1) ... Setting up libglib2.0-0:amd64 (2.58.3-2+deb10u3) ... No schema files found: doing nothing. Setting up libssl1.1:amd64 (1.1.1d-0+deb10u6) ... Setting up libmagic1:amd64 (1:5.35-4+deb10u2) ... Setting up fonts-freefont-ttf (20120503-9) ... Setting up gettext-base (0.19.8.1-9) ... Setting up file (1:5.35-4+deb10u2) ... Setting up rdkit-data (201809.1+dfsg-6) ... Setting up libicu63:amd64 (63.1-6+deb10u1) ... Setting up libschroedinger-maeparser1:amd64 (1.0.1-4) ... Setting up autotools-dev (20180224.1) ... Setting up libexpat1-dev:amd64 (2.2.6-2+deb10u1) ... Setting up libx11-data (2:1.6.7-1+deb10u2) ... Setting up libncurses6:amd64 (6.1+20181013-2+deb10u2) ... Setting up libsigsegv2:amd64 (2.12-2) ... Setting up libpng16-16:amd64 (1.6.36-6) ... Setting up autopoint (0.19.8.1-9) ... Setting up fonts-dejavu-core (2.37-1) ... Setting up libgfortran5:amd64 (8.3.0-6) ... Setting up sensible-utils (0.0.12) ... Setting up libuchardet0:amd64 (0.0.6-3) ... Setting up libboost-python1.67.0 (1.67.0-13+deb10u1) ... Setting up libboost-serialization1.67.0:amd64 (1.67.0-13+deb10u1) ... Setting up libbsd0:amd64 (0.9.1-2+deb10u1) ... Setting up libelf1:amd64 (0.176-1.1) ... Setting up readline-common (7.0-5) ... Setting up libxml2:amd64 (2.9.4+dfsg1-7+deb10u2) ... Setting up libreadline7:amd64 (7.0-5) ... Setting up libfile-stripnondeterminism-perl (1.1.2-1) ... Setting up libxdmcp6:amd64 (1:1.1.2-3) ... Setting up libxcb1:amd64 (1.13.1-2) ... Setting up libtool (2.4.6-9) ... Setting up libxcb-render0:amd64 (1.13.1-2) ... Setting up m4 (1.4.18-2) ... Setting up libschroedinger-coordgenlibs1:amd64 (1.1-3) ... Setting up libxcb-shm0:amd64 (1.13.1-2) ... Setting up libpython2.7-stdlib:amd64 (2.7.16-2+deb10u1) ... Setting up libblas3:amd64 (3.8.0-2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/blas/libblas.so.3 to provide /usr/lib/x86_64-linux-gnu/libblas.so.3 (libblas.so.3-x86_64-linux-gnu) in auto mode Setting up libfreetype6:amd64 (2.9.1-3+deb10u2) ... Setting up bsdmainutils (11.1.2+b1) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libcroco3:amd64 (0.6.12-3) ... Setting up ucf (3.0038+nmu1) ... Setting up autoconf (2.69-11) ... Setting up dwz (0.12-3) ... Setting up groff-base (1.22.4-3+deb10u1) ... Setting up libx11-6:amd64 (2:1.6.7-1+deb10u2) ... Setting up automake (1:1.16.1-4) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libpython2.7:amd64 (2.7.16-2+deb10u1) ... Setting up liblapack3:amd64 (3.8.0-2) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3 to provide /usr/lib/x86_64-linux-gnu/liblapack.so.3 (liblapack.so.3-x86_64-linux-gnu) in auto mode Setting up libpython2.7-dev:amd64 (2.7.16-2+deb10u1) ... Setting up gettext (0.19.8.1-9) ... Setting up python2.7 (2.7.16-2+deb10u1) ... Setting up libxrender1:amd64 (1:0.9.10-1) ... Setting up libpython2-stdlib:amd64 (2.7.16-1) ... Setting up fontconfig-config (2.13.1-2) ... Setting up librdkit1 (201809.1+dfsg-6) ... Setting up libxext6:amd64 (2:1.3.3-1+b2) ... Setting up man-db (2.8.5-2) ... Not building database; man-db/auto-update is not 'true'. Setting up python2 (2.7.16-1) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up libpython-stdlib:amd64 (2.7.16-1) ... Setting up libpython2-dev:amd64 (2.7.16-1) ... Setting up libfontconfig1:amd64 (2.13.1-2) ... Setting up python (2.7.16-1) ... Setting up python2.7-dev (2.7.16-2+deb10u1) ... Setting up python2-dev (2.7.16-1) ... Setting up python-pkg-resources (40.8.0-1) ... Setting up po-debconf (1.0.21) ... Setting up python-all (2.7.16-1) ... Setting up libcairo2:amd64 (1.16.0-4+deb10u1) ... Setting up libpython-dev:amd64 (2.7.16-1) ... Setting up python-dev (2.7.16-1) ... Setting up libpython-all-dev:amd64 (2.7.16-1) ... Setting up python-numpy (1:1.16.2-1) ... Setting up libopenbabel5 (2.4.1+dfsg-3) ... Setting up python-openbabel (2.4.1+dfsg-3) ... Setting up python-rdkit (201809.1+dfsg-6) ... Setting up python-all-dev (2.7.16-1) ... Setting up debhelper (12.1.1) ... Setting up dh-autoreconf (19) ... Setting up dh-strip-nondeterminism (1.1.2-1) ... Processing triggers for libc-bin (2.28-10) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps Reading package lists... Building dependency tree... Reading state information... fakeroot is already the newest version (1.23-1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package I: Running cd /build/chemfp-1.1p1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b dpkg-buildpackage: info: source package chemfp dpkg-buildpackage: info: source version 1.1p1-2.1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andrey Rahmatullin dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 fakeroot debian/rules clean dh clean --with python2 --parallel dh: Compatibility levels before 9 are deprecated (level 7 in use) dh_auto_clean -O--parallel dh_auto_clean: Compatibility levels before 9 are deprecated (level 7 in use) dh_auto_clean: Please use the third-party "pybuild" build system instead of python-distutils dh_auto_clean: This feature will be removed in compat 12. pyversions: missing X(S)-Python-Version in control file, fall back to debian/pyversions pyversions: missing debian/pyversions file, fall back to supported versions python setup.py clean -a running clean 'build/lib.linux-x86_64-2.7' does not exist -- can't clean it 'build/bdist.linux-x86_64' does not exist -- can't clean it 'build/scripts-2.7' does not exist -- can't clean it find . -name \*.pyc -exec rm {} \+ dh_clean -O--parallel dh_clean: Compatibility levels before 9 are deprecated (level 7 in use) debian/rules build dh build --with python2 --parallel dh: Compatibility levels before 9 are deprecated (level 7 in use) dh_update_autotools_config -O--parallel dh_auto_configure -O--parallel dh_auto_configure: Compatibility levels before 9 are deprecated (level 7 in use) dh_auto_configure: Please use the third-party "pybuild" build system instead of python-distutils dh_auto_configure: This feature will be removed in compat 12. dh_auto_build -O--parallel dh_auto_build: Compatibility levels before 9 are deprecated (level 7 in use) dh_auto_build: Please use the third-party "pybuild" build system instead of python-distutils dh_auto_build: This feature will be removed in compat 12. pyversions: missing X(S)-Python-Version in control file, fall back to debian/pyversions pyversions: missing debian/pyversions file, fall back to supported versions python setup.py build --force running build running build_py creating build creating build/lib.linux-x86_64-2.7 creating build/lib.linux-x86_64-2.7/chemfp copying chemfp/Watcher.py -> build/lib.linux-x86_64-2.7/chemfp copying chemfp/types.py -> build/lib.linux-x86_64-2.7/chemfp copying chemfp/slow.py -> build/lib.linux-x86_64-2.7/chemfp copying chemfp/search.py -> build/lib.linux-x86_64-2.7/chemfp copying chemfp/sdf_reader.py -> build/lib.linux-x86_64-2.7/chemfp copying chemfp/rdkit_patterns.py -> build/lib.linux-x86_64-2.7/chemfp copying chemfp/rdkit.py -> build/lib.linux-x86_64-2.7/chemfp copying chemfp/pattern_fingerprinter.py -> build/lib.linux-x86_64-2.7/chemfp copying chemfp/openeye_patterns.py -> build/lib.linux-x86_64-2.7/chemfp copying chemfp/openeye.py -> build/lib.linux-x86_64-2.7/chemfp copying chemfp/openbabel_patterns.py -> build/lib.linux-x86_64-2.7/chemfp copying chemfp/openbabel.py -> build/lib.linux-x86_64-2.7/chemfp copying chemfp/io.py -> build/lib.linux-x86_64-2.7/chemfp copying chemfp/fps_search.py -> build/lib.linux-x86_64-2.7/chemfp copying chemfp/fps_io.py -> build/lib.linux-x86_64-2.7/chemfp copying chemfp/error_handlers.py -> build/lib.linux-x86_64-2.7/chemfp copying chemfp/encodings.py -> build/lib.linux-x86_64-2.7/chemfp copying chemfp/decoders.py -> build/lib.linux-x86_64-2.7/chemfp copying chemfp/bitops.py -> build/lib.linux-x86_64-2.7/chemfp copying chemfp/argparse.py -> build/lib.linux-x86_64-2.7/chemfp copying chemfp/arena.py -> build/lib.linux-x86_64-2.7/chemfp copying chemfp/__init__.py -> build/lib.linux-x86_64-2.7/chemfp creating build/lib.linux-x86_64-2.7/chemfp/commandline copying chemfp/commandline/simsearch.py -> build/lib.linux-x86_64-2.7/chemfp/commandline copying chemfp/commandline/sdf2fps.py -> build/lib.linux-x86_64-2.7/chemfp/commandline copying chemfp/commandline/rdkit2fps.py -> build/lib.linux-x86_64-2.7/chemfp/commandline copying chemfp/commandline/oe2fps.py -> build/lib.linux-x86_64-2.7/chemfp/commandline copying chemfp/commandline/ob2fps.py -> build/lib.linux-x86_64-2.7/chemfp/commandline copying chemfp/commandline/fpsmerge.py -> build/lib.linux-x86_64-2.7/chemfp/commandline copying chemfp/commandline/cmdsupport.py -> build/lib.linux-x86_64-2.7/chemfp/commandline copying chemfp/commandline/__init__.py -> build/lib.linux-x86_64-2.7/chemfp/commandline creating build/lib.linux-x86_64-2.7/chemfp/futures copying chemfp/futures/thread.py -> build/lib.linux-x86_64-2.7/chemfp/futures copying chemfp/futures/process.py -> build/lib.linux-x86_64-2.7/chemfp/futures copying chemfp/futures/_compat.py -> build/lib.linux-x86_64-2.7/chemfp/futures copying chemfp/futures/_base.py -> build/lib.linux-x86_64-2.7/chemfp/futures copying chemfp/futures/__init__.py -> build/lib.linux-x86_64-2.7/chemfp/futures creating build/lib.linux-x86_64-2.7/chemfp/progressbar copying chemfp/progressbar/widgets.py -> build/lib.linux-x86_64-2.7/chemfp/progressbar copying chemfp/progressbar/compat.py -> build/lib.linux-x86_64-2.7/chemfp/progressbar copying chemfp/progressbar/__init__.py -> build/lib.linux-x86_64-2.7/chemfp/progressbar copying chemfp/rdmaccs.patterns -> build/lib.linux-x86_64-2.7/chemfp copying chemfp/substruct.patterns -> build/lib.linux-x86_64-2.7/chemfp running build_ext building '_chemfp' extension creating build/temp.linux-x86_64-2.7 creating build/temp.linux-x86_64-2.7/src x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -ffile-prefix-map=/build/chemfp-1.1p1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python2.7 -c src/bitops.c -o build/temp.linux-x86_64-2.7/src/bitops.o -fopenmp -mssse3 -O3 x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -ffile-prefix-map=/build/chemfp-1.1p1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python2.7 -c src/chemfp.c -o build/temp.linux-x86_64-2.7/src/chemfp.o -fopenmp -mssse3 -O3 x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -ffile-prefix-map=/build/chemfp-1.1p1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python2.7 -c src/heapq.c -o build/temp.linux-x86_64-2.7/src/heapq.o -fopenmp -mssse3 -O3 x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -ffile-prefix-map=/build/chemfp-1.1p1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python2.7 -c src/fps.c -o build/temp.linux-x86_64-2.7/src/fps.o -fopenmp -mssse3 -O3 x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -ffile-prefix-map=/build/chemfp-1.1p1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python2.7 -c src/searches.c -o build/temp.linux-x86_64-2.7/src/searches.o -fopenmp -mssse3 -O3 x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -ffile-prefix-map=/build/chemfp-1.1p1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python2.7 -c src/hits.c -o build/temp.linux-x86_64-2.7/src/hits.o -fopenmp -mssse3 -O3 src/hits.c: In function 'binary_insertion_find': src/hits.c:113:24: warning: variable 'rx2' set but not used [-Wunused-but-set-variable] SORT_TYPE2 lx2, cx2, rx2; ^~~ src/hits.c:112:24: warning: variable 'rx1' set but not used [-Wunused-but-set-variable] SORT_TYPE1 lx1, cx1, rx1; ^~~ x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -ffile-prefix-map=/build/chemfp-1.1p1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python2.7 -c src/select_popcount.c -o build/temp.linux-x86_64-2.7/src/select_popcount.o -fopenmp -mssse3 -O3 x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -ffile-prefix-map=/build/chemfp-1.1p1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python2.7 -c src/popcount_popcnt.c -o build/temp.linux-x86_64-2.7/src/popcount_popcnt.o -fopenmp -mssse3 -O3 x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -ffile-prefix-map=/build/chemfp-1.1p1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python2.7 -c src/popcount_lauradoux.c -o build/temp.linux-x86_64-2.7/src/popcount_lauradoux.o -fopenmp -mssse3 -O3 x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -ffile-prefix-map=/build/chemfp-1.1p1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python2.7 -c src/popcount_lut.c -o build/temp.linux-x86_64-2.7/src/popcount_lut.o -fopenmp -mssse3 -O3 x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -ffile-prefix-map=/build/chemfp-1.1p1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python2.7 -c src/popcount_gillies.c -o build/temp.linux-x86_64-2.7/src/popcount_gillies.o -fopenmp -mssse3 -O3 x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -ffile-prefix-map=/build/chemfp-1.1p1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python2.7 -c src/popcount_SSSE3.c -o build/temp.linux-x86_64-2.7/src/popcount_SSSE3.o -fopenmp -mssse3 -O3 x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -ffile-prefix-map=/build/chemfp-1.1p1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python2.7 -c src/python_api.c -o build/temp.linux-x86_64-2.7/src/python_api.o -fopenmp -mssse3 -O3 x86_64-linux-gnu-gcc -pthread -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -fno-strict-aliasing -g -O2 -ffile-prefix-map=/build/chemfp-1.1p1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/include/python2.7 -c src/pysearch_results.c -o build/temp.linux-x86_64-2.7/src/pysearch_results.o -fopenmp -mssse3 -O3 x86_64-linux-gnu-gcc -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-2.7.16=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,--as-needed -g -O2 -ffile-prefix-map=/build/chemfp-1.1p1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-x86_64-2.7/src/bitops.o build/temp.linux-x86_64-2.7/src/chemfp.o build/temp.linux-x86_64-2.7/src/heapq.o build/temp.linux-x86_64-2.7/src/fps.o build/temp.linux-x86_64-2.7/src/searches.o build/temp.linux-x86_64-2.7/src/hits.o build/temp.linux-x86_64-2.7/src/select_popcount.o build/temp.linux-x86_64-2.7/src/popcount_popcnt.o build/temp.linux-x86_64-2.7/src/popcount_lauradoux.o build/temp.linux-x86_64-2.7/src/popcount_lut.o build/temp.linux-x86_64-2.7/src/popcount_gillies.o build/temp.linux-x86_64-2.7/src/popcount_SSSE3.o build/temp.linux-x86_64-2.7/src/python_api.o build/temp.linux-x86_64-2.7/src/pysearch_results.o -o build/lib.linux-x86_64-2.7/_chemfp.so -fopenmp -O3 running build_scripts creating build/scripts-2.7 copying and adjusting ob2fps -> build/scripts-2.7 copying and adjusting oe2fps -> build/scripts-2.7 copying and adjusting rdkit2fps -> build/scripts-2.7 copying and adjusting sdf2fps -> build/scripts-2.7 copying and adjusting simsearch -> build/scripts-2.7 changing mode of build/scripts-2.7/ob2fps from 644 to 755 changing mode of build/scripts-2.7/oe2fps from 644 to 755 changing mode of build/scripts-2.7/rdkit2fps from 644 to 755 changing mode of build/scripts-2.7/sdf2fps from 644 to 755 changing mode of build/scripts-2.7/simsearch from 644 to 755 debian/rules override_dh_auto_test make[1]: Entering directory '/build/chemfp-1.1p1' for PY in 2.7; do \ py_path="/build/chemfp-1.1p1/build/lib.`python${PY} -c 'from distutils import util; print util.get_platform();'`-$PY/" ; \ (cd tests; PYTHONPATH=$py_path python$PY unit2 discover); \ done ..ssssssss...ss..............................................................................................................................................................................................................................................................[01:31:07] SMILES Parse Error: syntax error for input: 'Q' ..[01:31:07] WARNING: not removing hydrogen atom without neighbors [01:31:07] Atom line too short: ' 28 1 1 0 0 0' on line 37 [01:31:07] WARNING: not removing hydrogen atom without neighbors .[01:31:07] WARNING: not removing hydrogen atom without neighbors [01:31:07] Atom line too short: ' 28 1 1 0 0 0' on line 37 .[01:31:07] WARNING: not removing hydrogen atom without neighbors [01:31:07] Atom line too short: ' 28 1 1 0 0 0' on line 37 .[01:31:07] WARNING: not removing hydrogen atom without neighbors ....[01:31:07] WARNING: not removing hydrogen atom without neighbors [01:31:07] WARNING: not removing hydrogen atom without neighbors [01:31:07] WARNING: not removing hydrogen atom without neighbors .[01:31:07] WARNING: not removing hydrogen atom without neighbors [01:31:07] WARNING: not removing hydrogen atom without neighbors [01:31:07] WARNING: not removing hydrogen atom without neighbors .[01:31:07] WARNING: not removing hydrogen atom without neighbors [01:31:07] WARNING: not removing hydrogen atom without neighbors [01:31:07] WARNING: not removing hydrogen atom without neighbors .[01:31:07] WARNING: not removing hydrogen atom without neighbors [01:31:07] WARNING: not removing hydrogen atom without neighbors [01:31:07] WARNING: not removing hydrogen atom without neighbors .....[01:31:07] WARNING: not removing hydrogen atom without neighbors .[01:31:07] WARNING: not removing hydrogen atom without neighbors [01:31:07] WARNING: not removing hydrogen atom without neighbors [01:31:07] WARNING: not removing hydrogen atom without neighbors .[01:31:07] WARNING: not removing hydrogen atom without neighbors [01:31:07] WARNING: not removing hydrogen atom without neighbors [01:31:07] WARNING: not removing hydrogen atom without neighbors .[01:31:07] WARNING: not removing hydrogen atom without neighbors .[01:31:07] WARNING: not removing hydrogen atom without neighbors .[01:31:07] WARNING: not removing hydrogen atom without neighbors [01:31:07] WARNING: not removing hydrogen atom without neighbors [01:31:07] WARNING: not removing hydrogen atom without neighbors .[01:31:07] WARNING: not removing hydrogen atom without neighbors [01:31:07] WARNING: not removing hydrogen atom without neighbors [01:31:07] WARNING: not removing hydrogen atom without neighbors .[01:31:07] WARNING: not removing hydrogen atom without neighbors .F[01:31:07] WARNING: not removing hydrogen atom without neighbors [01:31:07] WARNING: not removing hydrogen atom without neighbors .[01:31:07] WARNING: not removing hydrogen atom without neighbors [01:31:07] WARNING: not removing hydrogen atom without neighbors [01:31:07] WARNING: not removing hydrogen atom without neighbors .[01:31:07] WARNING: not removing hydrogen atom without neighbors [01:31:07] WARNING: not removing hydrogen atom without neighbors [01:31:07] WARNING: not removing hydrogen atom without neighbors .[01:31:07] WARNING: not removing hydrogen atom without neighbors [01:31:07] WARNING: not removing hydrogen atom without neighbors ...........F.F.F.F.F.....F..................ssssssssssssssssssssssssssssssssssssssssssssssssssssssssssssssssssssssssssssssssssssssssssssss....s.........................................s......................................................................................................................................................................................................................................................................................................ssssssssssssssssssss...[01:31:29] WARNING: not removing hydrogen atom without neighbors .[01:31:29] WARNING: not removing hydrogen atom without neighbors [01:31:29] WARNING: not removing hydrogen atom without neighbors [01:31:29] WARNING: not removing hydrogen atom without neighbors .[01:31:29] WARNING: not removing hydrogen atom without neighbors [01:31:29] WARNING: not removing hydrogen atom without neighbors [01:31:29] WARNING: not removing hydrogen atom without neighbors .[01:31:29] WARNING: not removing hydrogen atom without neighbors ............................................................................................. ====================================================================== FAIL: test_output (test_rdkit2fps.TestIO) ---------------------------------------------------------------------- Traceback (most recent call last): File "/build/chemfp-1.1p1/tests/test_rdkit2fps.py", line 388, in test_output self.assertEquals(result[0], _fp1 + "\t9425004\n") AssertionError: '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\t9425004\n' != '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\t9425004\n' ====================================================================== FAIL: test_as_rdk (test_rdkit2fps.TestRDKFingerprints) ---------------------------------------------------------------------- Traceback (most recent call last): File "/build/chemfp-1.1p1/tests/test_rdkit2fps.py", line 83, in test_as_rdk self.assertEquals(result[0], _fp1 + "\t9425004") AssertionError: '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\t9425004' != '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\t9425004' ====================================================================== FAIL: test_bits_per_hash_default (test_rdkit2fps.TestRDKFingerprints) ---------------------------------------------------------------------- Traceback (most recent call last): File "/build/chemfp-1.1p1/tests/test_rdkit2fps.py", line 116, in test_bits_per_hash_default self.assertEquals(first.split()[0], _fp1) AssertionError: '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' != '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' ====================================================================== FAIL: test_is_default (test_rdkit2fps.TestRDKFingerprints) ---------------------------------------------------------------------- Traceback (most recent call last): File "/build/chemfp-1.1p1/tests/test_rdkit2fps.py", line 76, in test_is_default self.assertEquals(result[0], _fp1 + "\t9425004") AssertionError: '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\t9425004' != '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\t9425004' ====================================================================== FAIL: test_max_path_default (test_rdkit2fps.TestRDKFingerprints) ---------------------------------------------------------------------- Traceback (most recent call last): File "/build/chemfp-1.1p1/tests/test_rdkit2fps.py", line 152, in test_max_path_default self.assertEquals(first.split()[0], _fp1) AssertionError: '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' != '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' ====================================================================== FAIL: test_min_path_default (test_rdkit2fps.TestRDKFingerprints) ---------------------------------------------------------------------- Traceback (most recent call last): File "/build/chemfp-1.1p1/tests/test_rdkit2fps.py", line 132, in test_min_path_default self.assertEquals(first.split()[0], _fp1) AssertionError: '3d82d0c7843d24ab7d7cb6c2b323b5bbd8b3a32e5ac7b467b7ca5d7d8bc00a5cfd72d6faf127179bae9f5d1a6c97eefa28cdbdcdfdb98a46fdc9e5dbc2fb9543b6cdd30e53e3defdfdc4e7d3cc52effaf333f11395b9759b8f4c36df6c45119cf28eba819cf3ff7f97deceec3312dd90fecf14f1675e765489e89a5e7e3dbb6fddd7add35f8f7a2ebfd1572b7f5bdd995bdd5e573d6cc9a2a8094b8b3761cc04e80ca11d01376d56728fe48f8f6b368fdfd7b8187e2e6fba5d1f2cf16e8df1f1e3f6f2f6f71733f1572abb00cec90fabde5a3dc9bc84cf7c5324bfcf7db66a2b75d7e2f33f53d172ea4f5713bfd5f81f73d3ed6d171188fd496cce64bbf875ad' != '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' ====================================================================== FAIL: test_num_bits_default (test_rdkit2fps.TestRDKFingerprints) ---------------------------------------------------------------------- Traceback (most recent call last): File "/build/chemfp-1.1p1/tests/test_rdkit2fps.py", line 90, in test_num_bits_default self.assertEquals(result[0], _fp1 + "\t9425004") AssertionError: '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\t9425004' != '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\t9425004' ---------------------------------------------------------------------- Ran 896 tests in 25.596s FAILED (failures=7, skipped=126) make[1]: [debian/rules:26: override_dh_auto_test] Error 1 (ignored) make[1]: Leaving directory '/build/chemfp-1.1p1' fakeroot debian/rules binary dh binary --with python2 --parallel dh: Compatibility levels before 9 are deprecated (level 7 in use) dh_testroot -O--parallel dh_prep -O--parallel dh_auto_install -O--parallel dh_auto_install: Compatibility levels before 9 are deprecated (level 7 in use) dh_auto_install: Please use the third-party "pybuild" build system instead of python-distutils dh_auto_install: This feature will be removed in compat 12. pyversions: missing X(S)-Python-Version in control file, fall back to debian/pyversions pyversions: missing debian/pyversions file, fall back to supported versions python setup.py install --force --root=/build/chemfp-1.1p1/debian/python-chemfp --no-compile -O0 --install-layout=deb running install running build running build_py running build_ext running build_scripts running install_lib creating /build/chemfp-1.1p1/debian/python-chemfp/usr creating /build/chemfp-1.1p1/debian/python-chemfp/usr/lib creating /build/chemfp-1.1p1/debian/python-chemfp/usr/lib/python2.7 creating /build/chemfp-1.1p1/debian/python-chemfp/usr/lib/python2.7/dist-packages copying build/lib.linux-x86_64-2.7/_chemfp.so -> /build/chemfp-1.1p1/debian/python-chemfp/usr/lib/python2.7/dist-packages creating /build/chemfp-1.1p1/debian/python-chemfp/usr/lib/python2.7/dist-packages/chemfp copying build/lib.linux-x86_64-2.7/chemfp/pattern_fingerprinter.pyc -> /build/chemfp-1.1p1/debian/python-chemfp/usr/lib/python2.7/dist-packages/chemfp copying build/lib.linux-x86_64-2.7/chemfp/openbabel_patterns.pyc -> /build/chemfp-1.1p1/debian/python-chemfp/usr/lib/python2.7/dist-packages/chemfp copying build/lib.linux-x86_64-2.7/chemfp/slow.pyc -> /build/chemfp-1.1p1/debian/python-chemfp/usr/lib/python2.7/dist-packages/chemfp copying build/lib.linux-x86_64-2.7/chemfp/openbabel.pyc -> /build/chemfp-1.1p1/debian/python-chemfp/usr/lib/python2.7/dist-packages/chemfp copying build/lib.linux-x86_64-2.7/chemfp/error_handlers.pyc -> /build/chemfp-1.1p1/debian/python-chemfp/usr/lib/python2.7/dist-packages/chemfp copying build/lib.linux-x86_64-2.7/chemfp/arena.pyc -> /build/chemfp-1.1p1/debian/python-chemfp/usr/lib/python2.7/dist-packages/chemfp copying build/lib.linux-x86_64-2.7/chemfp/fps_search.pyc -> /build/chemfp-1.1p1/debian/python-chemfp/usr/lib/python2.7/dist-packages/chemfp copying build/lib.linux-x86_64-2.7/chemfp/fps_io.pyc -> /build/chemfp-1.1p1/debian/python-chemfp/usr/lib/python2.7/dist-packages/chemfp copying build/lib.linux-x86_64-2.7/chemfp/bitops.pyc -> /build/chemfp-1.1p1/debian/python-chemfp/usr/lib/python2.7/dist-packages/chemfp copying build/lib.linux-x86_64-2.7/chemfp/search.pyc -> /build/chemfp-1.1p1/debian/python-chemfp/usr/lib/python2.7/dist-packages/chemfp copying build/lib.linux-x86_64-2.7/chemfp/sdf_reader.pyc -> /build/chemfp-1.1p1/debian/python-chemfp/usr/lib/python2.7/dist-packages/chemfp copying build/lib.linux-x86_64-2.7/chemfp/rdkit.pyc -> /build/chemfp-1.1p1/debian/python-chemfp/usr/lib/python2.7/dist-packages/chemfp copying build/lib.linux-x86_64-2.7/chemfp/openeye.pyc -> /build/chemfp-1.1p1/debian/python-chemfp/usr/lib/python2.7/dist-packages/chemfp copying build/lib.linux-x86_64-2.7/chemfp/encodings.pyc -> /build/chemfp-1.1p1/debian/python-chemfp/usr/lib/python2.7/dist-packages/chemfp copying build/lib.linux-x86_64-2.7/chemfp/io.pyc -> /build/chemfp-1.1p1/debian/python-chemfp/usr/lib/python2.7/dist-packages/chemfp copying build/lib.linux-x86_64-2.7/chemfp/argparse.pyc -> /build/chemfp-1.1p1/debian/python-chemfp/usr/lib/python2.7/dist-packages/chemfp copying build/lib.linux-x86_64-2.7/chemfp/types.pyc -> /build/chemfp-1.1p1/debian/python-chemfp/usr/lib/python2.7/dist-packages/chemfp copying build/lib.linux-x86_64-2.7/chemfp/__init__.pyc -> /build/chemfp-1.1p1/debian/python-chemfp/usr/lib/python2.7/dist-packages/chemfp copying build/lib.linux-x86_64-2.7/chemfp/substruct.patterns -> /build/chemfp-1.1p1/debian/python-chemfp/usr/lib/python2.7/dist-packages/chemfp copying build/lib.linux-x86_64-2.7/chemfp/rdmaccs.patterns -> /build/chemfp-1.1p1/debian/python-chemfp/usr/lib/python2.7/dist-packages/chemfp creating /build/chemfp-1.1p1/debian/python-chemfp/usr/lib/python2.7/dist-packages/chemfp/progressbar copying build/lib.linux-x86_64-2.7/chemfp/progressbar/__init__.py -> /build/chemfp-1.1p1/debian/python-chemfp/usr/lib/python2.7/dist-packages/chemfp/progressbar copying build/lib.linux-x86_64-2.7/chemfp/progressbar/compat.py -> /build/chemfp-1.1p1/debian/python-chemfp/usr/lib/python2.7/dist-packages/chemfp/progressbar copying build/lib.linux-x86_64-2.7/chemfp/progressbar/widgets.py -> /build/chemfp-1.1p1/debian/python-chemfp/usr/lib/python2.7/dist-packages/chemfp/progressbar creating /build/chemfp-1.1p1/debian/python-chemfp/usr/lib/python2.7/dist-packages/chemfp/futures copying build/lib.linux-x86_64-2.7/chemfp/futures/__init__.py -> /build/chemfp-1.1p1/debian/python-chemfp/usr/lib/python2.7/dist-packages/chemfp/futures copying build/lib.linux-x86_64-2.7/chemfp/futures/_base.py -> /build/chemfp-1.1p1/debian/python-chemfp/usr/lib/python2.7/dist-packages/chemfp/futures copying build/lib.linux-x86_64-2.7/chemfp/futures/_compat.py -> /build/chemfp-1.1p1/debian/python-chemfp/usr/lib/python2.7/dist-packages/chemfp/futures copying build/lib.linux-x86_64-2.7/chemfp/futures/process.py -> /build/chemfp-1.1p1/debian/python-chemfp/usr/lib/python2.7/dist-packages/chemfp/futures copying build/lib.linux-x86_64-2.7/chemfp/futures/thread.py -> /build/chemfp-1.1p1/debian/python-chemfp/usr/lib/python2.7/dist-packages/chemfp/futures creating /build/chemfp-1.1p1/debian/python-chemfp/usr/lib/python2.7/dist-packages/chemfp/commandline copying build/lib.linux-x86_64-2.7/chemfp/commandline/ob2fps.pyc -> /build/chemfp-1.1p1/debian/python-chemfp/usr/lib/python2.7/dist-packages/chemfp/commandline copying build/lib.linux-x86_64-2.7/chemfp/commandline/rdkit2fps.pyc -> /build/chemfp-1.1p1/debian/python-chemfp/usr/lib/python2.7/dist-packages/chemfp/commandline copying build/lib.linux-x86_64-2.7/chemfp/commandline/cmdsupport.pyc -> /build/chemfp-1.1p1/debian/python-chemfp/usr/lib/python2.7/dist-packages/chemfp/commandline copying build/lib.linux-x86_64-2.7/chemfp/commandline/sdf2fps.pyc -> /build/chemfp-1.1p1/debian/python-chemfp/usr/lib/python2.7/dist-packages/chemfp/commandline copying build/lib.linux-x86_64-2.7/chemfp/commandline/simsearch.pyc -> /build/chemfp-1.1p1/debian/python-chemfp/usr/lib/python2.7/dist-packages/chemfp/commandline copying build/lib.linux-x86_64-2.7/chemfp/commandline/__init__.pyc -> /build/chemfp-1.1p1/debian/python-chemfp/usr/lib/python2.7/dist-packages/chemfp/commandline copying build/lib.linux-x86_64-2.7/chemfp/commandline/__init__.py -> /build/chemfp-1.1p1/debian/python-chemfp/usr/lib/python2.7/dist-packages/chemfp/commandline copying build/lib.linux-x86_64-2.7/chemfp/commandline/cmdsupport.py -> /build/chemfp-1.1p1/debian/python-chemfp/usr/lib/python2.7/dist-packages/chemfp/commandline copying build/lib.linux-x86_64-2.7/chemfp/commandline/fpsmerge.py -> /build/chemfp-1.1p1/debian/python-chemfp/usr/lib/python2.7/dist-packages/chemfp/commandline copying build/lib.linux-x86_64-2.7/chemfp/commandline/ob2fps.py -> /build/chemfp-1.1p1/debian/python-chemfp/usr/lib/python2.7/dist-packages/chemfp/commandline copying build/lib.linux-x86_64-2.7/chemfp/commandline/oe2fps.py -> /build/chemfp-1.1p1/debian/python-chemfp/usr/lib/python2.7/dist-packages/chemfp/commandline copying build/lib.linux-x86_64-2.7/chemfp/commandline/rdkit2fps.py -> /build/chemfp-1.1p1/debian/python-chemfp/usr/lib/python2.7/dist-packages/chemfp/commandline copying build/lib.linux-x86_64-2.7/chemfp/commandline/sdf2fps.py -> /build/chemfp-1.1p1/debian/python-chemfp/usr/lib/python2.7/dist-packages/chemfp/commandline copying build/lib.linux-x86_64-2.7/chemfp/commandline/simsearch.py -> /build/chemfp-1.1p1/debian/python-chemfp/usr/lib/python2.7/dist-packages/chemfp/commandline copying build/lib.linux-x86_64-2.7/chemfp/__init__.py -> /build/chemfp-1.1p1/debian/python-chemfp/usr/lib/python2.7/dist-packages/chemfp copying build/lib.linux-x86_64-2.7/chemfp/arena.py -> /build/chemfp-1.1p1/debian/python-chemfp/usr/lib/python2.7/dist-packages/chemfp copying build/lib.linux-x86_64-2.7/chemfp/argparse.py -> /build/chemfp-1.1p1/debian/python-chemfp/usr/lib/python2.7/dist-packages/chemfp copying build/lib.linux-x86_64-2.7/chemfp/bitops.py -> /build/chemfp-1.1p1/debian/python-chemfp/usr/lib/python2.7/dist-packages/chemfp copying build/lib.linux-x86_64-2.7/chemfp/decoders.py -> /build/chemfp-1.1p1/debian/python-chemfp/usr/lib/python2.7/dist-packages/chemfp copying build/lib.linux-x86_64-2.7/chemfp/encodings.py -> /build/chemfp-1.1p1/debian/python-chemfp/usr/lib/python2.7/dist-packages/chemfp copying build/lib.linux-x86_64-2.7/chemfp/error_handlers.py -> /build/chemfp-1.1p1/debian/python-chemfp/usr/lib/python2.7/dist-packages/chemfp copying build/lib.linux-x86_64-2.7/chemfp/fps_io.py -> /build/chemfp-1.1p1/debian/python-chemfp/usr/lib/python2.7/dist-packages/chemfp copying build/lib.linux-x86_64-2.7/chemfp/fps_search.py -> /build/chemfp-1.1p1/debian/python-chemfp/usr/lib/python2.7/dist-packages/chemfp copying build/lib.linux-x86_64-2.7/chemfp/io.py -> /build/chemfp-1.1p1/debian/python-chemfp/usr/lib/python2.7/dist-packages/chemfp copying build/lib.linux-x86_64-2.7/chemfp/openbabel.py -> /build/chemfp-1.1p1/debian/python-chemfp/usr/lib/python2.7/dist-packages/chemfp copying build/lib.linux-x86_64-2.7/chemfp/openbabel_patterns.py -> /build/chemfp-1.1p1/debian/python-chemfp/usr/lib/python2.7/dist-packages/chemfp copying build/lib.linux-x86_64-2.7/chemfp/openeye.py -> /build/chemfp-1.1p1/debian/python-chemfp/usr/lib/python2.7/dist-packages/chemfp copying build/lib.linux-x86_64-2.7/chemfp/openeye_patterns.py -> /build/chemfp-1.1p1/debian/python-chemfp/usr/lib/python2.7/dist-packages/chemfp copying build/lib.linux-x86_64-2.7/chemfp/pattern_fingerprinter.py -> /build/chemfp-1.1p1/debian/python-chemfp/usr/lib/python2.7/dist-packages/chemfp copying build/lib.linux-x86_64-2.7/chemfp/rdkit.py -> /build/chemfp-1.1p1/debian/python-chemfp/usr/lib/python2.7/dist-packages/chemfp copying build/lib.linux-x86_64-2.7/chemfp/rdkit_patterns.py -> /build/chemfp-1.1p1/debian/python-chemfp/usr/lib/python2.7/dist-packages/chemfp copying build/lib.linux-x86_64-2.7/chemfp/sdf_reader.py -> /build/chemfp-1.1p1/debian/python-chemfp/usr/lib/python2.7/dist-packages/chemfp copying build/lib.linux-x86_64-2.7/chemfp/search.py -> /build/chemfp-1.1p1/debian/python-chemfp/usr/lib/python2.7/dist-packages/chemfp copying build/lib.linux-x86_64-2.7/chemfp/slow.py -> /build/chemfp-1.1p1/debian/python-chemfp/usr/lib/python2.7/dist-packages/chemfp copying build/lib.linux-x86_64-2.7/chemfp/types.py -> /build/chemfp-1.1p1/debian/python-chemfp/usr/lib/python2.7/dist-packages/chemfp copying build/lib.linux-x86_64-2.7/chemfp/Watcher.py -> /build/chemfp-1.1p1/debian/python-chemfp/usr/lib/python2.7/dist-packages/chemfp running install_scripts creating /build/chemfp-1.1p1/debian/python-chemfp/usr/bin copying build/scripts-2.7/simsearch -> /build/chemfp-1.1p1/debian/python-chemfp/usr/bin copying build/scripts-2.7/sdf2fps -> /build/chemfp-1.1p1/debian/python-chemfp/usr/bin copying build/scripts-2.7/rdkit2fps -> /build/chemfp-1.1p1/debian/python-chemfp/usr/bin copying build/scripts-2.7/oe2fps -> /build/chemfp-1.1p1/debian/python-chemfp/usr/bin copying build/scripts-2.7/ob2fps -> /build/chemfp-1.1p1/debian/python-chemfp/usr/bin changing mode of /build/chemfp-1.1p1/debian/python-chemfp/usr/bin/simsearch to 755 changing mode of /build/chemfp-1.1p1/debian/python-chemfp/usr/bin/sdf2fps to 755 changing mode of /build/chemfp-1.1p1/debian/python-chemfp/usr/bin/rdkit2fps to 755 changing mode of /build/chemfp-1.1p1/debian/python-chemfp/usr/bin/oe2fps to 755 changing mode of /build/chemfp-1.1p1/debian/python-chemfp/usr/bin/ob2fps to 755 running install_egg_info Writing /build/chemfp-1.1p1/debian/python-chemfp/usr/lib/python2.7/dist-packages/chemfp-1.1p1.egg-info dh_installdocs -O--parallel dh_installdocs: Compatibility levels before 9 are deprecated (level 7 in use) dh_installchangelogs -O--parallel dh_installchangelogs: Compatibility levels before 9 are deprecated (level 7 in use) dh_installman -O--parallel dh_installman: Compatibility levels before 9 are deprecated (level 7 in use) dh_python2 -O--parallel W: dh_python2:479: Please add dh-python package to Build-Depends dh_installinit -O--parallel dh_installinit: Compatibility levels before 9 are deprecated (level 7 in use) dh_perl -O--parallel dh_link -O--parallel dh_strip_nondeterminism -O--parallel dh_compress -O--parallel dh_compress: Compatibility levels before 9 are deprecated (level 7 in use) dh_fixperms -O--parallel dh_missing -O--parallel dh_missing: Compatibility levels before 9 are deprecated (level 7 in use) dh_strip -O--parallel dh_strip: Compatibility levels before 9 are deprecated (level 7 in use) dh_makeshlibs -O--parallel dh_makeshlibs: Compatibility levels before 9 are deprecated (level 7 in use) dh_shlibdeps -O--parallel dh_shlibdeps: Compatibility levels before 9 are deprecated (level 7 in use) dh_installdeb -O--parallel dh_installdeb: Compatibility levels before 9 are deprecated (level 7 in use) dh_gencontrol -O--parallel dpkg-gencontrol: warning: package python-chemfp: substitution variable ${python:Versions} unused, but is defined dpkg-gencontrol: warning: package python-chemfp: substitution variable ${python:Versions} unused, but is defined dh_md5sums -O--parallel dh_builddeb -O--parallel dpkg-deb: building package 'python-chemfp-dbgsym' in '../python-chemfp-dbgsym_1.1p1-2.1_amd64.deb'. dpkg-deb: building package 'python-chemfp' in '../python-chemfp_1.1p1-2.1_amd64.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../chemfp_1.1p1-2.1_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/32560 and its subdirectories I: Current time: Tue Aug 10 01:31:37 -12 2021 I: pbuilder-time-stamp: 1628602297 Tue Aug 10 13:31:38 UTC 2021 I: 1st build successful. Starting 2nd build on remote node ionos15-amd64.debian.net. Tue Aug 10 13:31:38 UTC 2021 I: Preparing to do remote build '2' on ionos15-amd64.debian.net. Tue Aug 10 13:34:05 UTC 2021 I: Deleting $TMPDIR on ionos15-amd64.debian.net. Tue Aug 10 13:34:05 UTC 2021 I: chemfp_1.1p1-2.1_amd64.changes: Format: 1.8 Date: Fri, 14 Nov 2014 21:55:00 +0500 Source: chemfp Binary: python-chemfp python-chemfp-dbgsym Architecture: amd64 Version: 1.1p1-2.1 Distribution: unstable Urgency: medium Maintainer: Debichem Team Changed-By: Andrey Rahmatullin Description: python-chemfp - cheminformatics fingerprints file formats and tools Closes: 768703 Changes: chemfp (1.1p1-2.1) unstable; urgency=medium . * Non-maintainer upload. * Drop unnecessary build dependency on python-unit (Closes: #768703). Checksums-Sha1: 29e05e07c2d42eb200ec688d8d74f6eb830854f9 6596 chemfp_1.1p1-2.1_amd64.buildinfo 2d140e5bd836daa8a57625a1644479be02f31d98 161984 python-chemfp-dbgsym_1.1p1-2.1_amd64.deb 4cd9f7c1c06a2fcb104191bffbafb34d4de3abd1 165000 python-chemfp_1.1p1-2.1_amd64.deb Checksums-Sha256: e06910dd831e335513a3e0c29d47cbc9edf899d867d602100eca080f63863927 6596 chemfp_1.1p1-2.1_amd64.buildinfo ca407dfca9e9674eac07c1bb934cb6da8e9bb19da942077ff6490781519cc6fb 161984 python-chemfp-dbgsym_1.1p1-2.1_amd64.deb 5cc07e9ae785f19d5e920265f010102fc7686349f9edf29421c5ebc376b84da0 165000 python-chemfp_1.1p1-2.1_amd64.deb Files: 6de4e2fb39d2c427e352eb3864f2b074 6596 science optional chemfp_1.1p1-2.1_amd64.buildinfo 70494c981577a6dc26977157249a045b 161984 debug optional python-chemfp-dbgsym_1.1p1-2.1_amd64.deb 9051db227883546a19ca705458e84161 165000 python optional python-chemfp_1.1p1-2.1_amd64.deb Tue Aug 10 13:34:06 UTC 2021 I: diffoscope 180 will be used to compare the two builds: # Profiling output for: /usr/bin/diffoscope --html /srv/reproducible-results/rbuild-debian/tmp.kiOH0oTd82/chemfp_1.1p1-2.1.diffoscope.html --text /srv/reproducible-results/rbuild-debian/tmp.kiOH0oTd82/chemfp_1.1p1-2.1.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/tmp.kiOH0oTd82/chemfp_1.1p1-2.1.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/tmp.kiOH0oTd82/b1/chemfp_1.1p1-2.1_amd64.changes /srv/reproducible-results/rbuild-debian/tmp.kiOH0oTd82/b2/chemfp_1.1p1-2.1_amd64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.265s) 0.265s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.025s) 0.024s 10 calls diffoscope.comparators.binary.FilesystemFile 0.000s 8 calls abc.DotChangesFile Tue Aug 10 13:34:08 UTC 2021 I: diffoscope 180 found no differences in the changes files, and a .buildinfo file also exists. Tue Aug 10 13:34:08 UTC 2021 I: chemfp from buster built successfully and reproducibly on amd64. Tue Aug 10 13:34:10 UTC 2021 I: Submitting .buildinfo files to external archives: Tue Aug 10 13:34:10 UTC 2021 I: Submitting 8.0K b1/chemfp_1.1p1-2.1_amd64.buildinfo.asc Tue Aug 10 13:34:11 UTC 2021 I: Submitting 8.0K b2/chemfp_1.1p1-2.1_amd64.buildinfo.asc Tue Aug 10 13:34:11 UTC 2021 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Tue Aug 10 13:34:11 UTC 2021 I: Done submitting .buildinfo files. Tue Aug 10 13:34:11 UTC 2021 I: Removing signed chemfp_1.1p1-2.1_amd64.buildinfo.asc files: removed './b1/chemfp_1.1p1-2.1_amd64.buildinfo.asc' removed './b2/chemfp_1.1p1-2.1_amd64.buildinfo.asc'