Thu Jun 24 15:20:25 UTC 2021 I: starting to build sim4/bullseye/i386 on jenkins on '2021-06-24 15:20' Thu Jun 24 15:20:25 UTC 2021 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/i386_14/16285/console.log Thu Jun 24 15:20:25 UTC 2021 I: Downloading source for bullseye/sim4=0.0.20121010-8 --2021-06-24 15:20:25-- http://cdn-fastly.deb.debian.org/debian/pool/main/s/sim4/sim4_0.0.20121010-8.dsc Connecting to 78.137.99.97:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 1978 (1.9K) Saving to: ‘sim4_0.0.20121010-8.dsc’ 0K . 100% 167M=0s 2021-06-24 15:20:25 (167 MB/s) - ‘sim4_0.0.20121010-8.dsc’ saved [1978/1978] Thu Jun 24 15:20:25 UTC 2021 I: sim4_0.0.20121010-8.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: sim4 Binary: sim4 Architecture: any Version: 0.0.20121010-8 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille Homepage: https://globin.bx.psu.edu/html/docs/sim4.html Standards-Version: 4.5.1 Vcs-Browser: https://salsa.debian.org/med-team/sim4 Vcs-Git: https://salsa.debian.org/med-team/sim4.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13) Package-List: sim4 deb science optional arch=any Checksums-Sha1: af09413d4f79f2f6f642c26f1084a9403c3a3257 61240 sim4_0.0.20121010.orig.tar.gz 5325071e56f291a76203f9289657132845a29dcd 315540 sim4_0.0.20121010-8.debian.tar.xz Checksums-Sha256: d2132f61e47f2de5e35d0b48a0f697ae79ece3e8b91177eae2dfe47bda97b4a5 61240 sim4_0.0.20121010.orig.tar.gz 76a0f331358cd01fb7d93107678dbeb066cf2e7e60419d946624909f1d50a94a 315540 sim4_0.0.20121010-8.debian.tar.xz Files: 8bca6eb05c5aaf689db0db12522bdf34 61240 sim4_0.0.20121010.orig.tar.gz f5ef5efa2b5354ec7d06144d5a4cb246 315540 sim4_0.0.20121010-8.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAl/KS6MRHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtHjsw//Z2CkFUGn/Bb7PswKylgSLYeaQie3R7xD iyOs31xwhEz61rYb5nBVKKzUR+dLAsTmITFxozCMo1NkrF1lNVExdI2mzKh5u6Bv Xrt5gwSm0f/Im1I5adfTiYKzJTpWNr1AiNyDFGC9S7uT1PHK9hBBOBc2fpKgllzW Y+PrmuwrfMUbYqOh2ftnxIwCu4MkgxSZkpMdrieylQE9X+qF3vABH+j6mkmh7z6W UVWsIiZI9TFEBldyM7JJNCZCeeHwk0dy2DQa+X+PtaeAX0hMknlcmZ6ISHy97JXj xMMfMJUg+w7VefGRMM4tMXp35SjvT01PguJxcfi2HrKFCBMY6ggxVrN5V989uy9g k3fzmZIbHqD7yjQG8W33JCfa4LxCbVjGw+BJjRDGwhKzV7Y1hAESqTFLV9sijVI1 fJIFx2XJhO36EMR1g6hNRDJQFtEIS8Pfo9JGzqiAADF6JPRzx9mEfIe13J0rl/87 6iqO15kQYEoAGhu6adifhYUd2PYImKytIoSbhgDy/014zS2JZ760lx7NkPG2dPKy NaU2KNWV3yWMPp0VHHI11fQh0uCBckWJ5i9W4Cw59sQ11o3xNLbf+TtmjIRlOAXI 2K7zJQA1O9WoJBjVcHQY1+9PEjmiWWLtWbuBblF1gcDKKzBWbkBFpMVS4GgxgL5v cBfAiZt/ZOk= =yLLo -----END PGP SIGNATURE----- Thu Jun 24 15:20:25 UTC 2021 I: Checking whether the package is not for us Thu Jun 24 15:20:25 UTC 2021 I: Starting 1st build on remote node ionos6-i386.debian.net. Thu Jun 24 15:20:25 UTC 2021 I: Preparing to do remote build '1' on ionos6-i386.debian.net. Thu Jun 24 15:20:48 UTC 2021 I: Deleting $TMPDIR on ionos6-i386.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Wed Jul 27 09:43:26 -12 2022 I: pbuilder-time-stamp: 1658958206 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bullseye-reproducible-base.tgz] I: copying local configuration I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: using eatmydata during job I: Copying source file I: copying [sim4_0.0.20121010-8.dsc] I: copying [./sim4_0.0.20121010.orig.tar.gz] I: copying [./sim4_0.0.20121010-8.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/tmp/dpkg-verify-sig.3WluuBiZ/trustedkeys.kbx': General error gpgv: Signature made Fri Dec 4 02:45:55 2020 -12 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./sim4_0.0.20121010-8.dsc dpkg-source: info: extracting sim4 in sim4-0.0.20121010 dpkg-source: info: unpacking sim4_0.0.20121010.orig.tar.gz dpkg-source: info: unpacking sim4_0.0.20121010-8.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying hardening.patch dpkg-source: info: applying compilation_order.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/27484/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='i386' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=18' DISTRIBUTION='' HOME='/root' HOST_ARCH='i386' IFS=' ' INVOCATION_ID='7262dd6f095b4f4aac24f6fe24da969e' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' LD_LIBRARY_PATH='/usr/lib/libeatmydata' LD_PRELOAD='libeatmydata.so' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='27484' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.uM98SCNJfC/pbuilderrc_iYLY --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.uM98SCNJfC/b1 --logfile b1/build.log sim4_0.0.20121010-8.dsc' SUDO_GID='112' SUDO_UID='107' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://85.184.249.68:3128' I: uname -a Linux ionos6-i386 4.19.0-17-amd64 #1 SMP Debian 4.19.194-1 (2021-06-10) x86_64 GNU/Linux I: ls -l /bin total 5776 -rwxr-xr-x 1 root root 1367848 Jun 21 2021 bash -rwxr-xr-x 3 root root 38280 Jul 20 2020 bunzip2 -rwxr-xr-x 3 root root 38280 Jul 20 2020 bzcat lrwxrwxrwx 1 root root 6 Jul 20 2020 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2225 Jul 20 2020 bzdiff lrwxrwxrwx 1 root root 6 Jul 20 2020 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4877 Sep 4 2019 bzexe lrwxrwxrwx 1 root root 6 Jul 20 2020 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3775 Jul 20 2020 bzgrep -rwxr-xr-x 3 root root 38280 Jul 20 2020 bzip2 -rwxr-xr-x 1 root root 17768 Jul 20 2020 bzip2recover lrwxrwxrwx 1 root root 6 Jul 20 2020 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Jul 20 2020 bzmore -rwxr-xr-x 1 root root 38824 Sep 22 2020 cat -rwxr-xr-x 1 root root 71624 Sep 22 2020 chgrp -rwxr-xr-x 1 root root 67528 Sep 22 2020 chmod -rwxr-xr-x 1 root root 75752 Sep 22 2020 chown -rwxr-xr-x 1 root root 157960 Sep 22 2020 cp -rwxr-xr-x 1 root root 128724 Dec 10 2020 dash -rwxr-xr-x 1 root root 124904 Sep 22 2020 date -rwxr-xr-x 1 root root 92172 Sep 22 2020 dd -rwxr-xr-x 1 root root 100752 Sep 22 2020 df -rwxr-xr-x 1 root root 153964 Sep 22 2020 dir -rwxr-xr-x 1 root root 83644 Feb 7 2021 dmesg lrwxrwxrwx 1 root root 8 Nov 6 2019 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Nov 6 2019 domainname -> hostname -rwxr-xr-x 1 root root 34664 Sep 22 2020 echo -rwxr-xr-x 1 root root 28 Nov 9 2020 egrep -rwxr-xr-x 1 root root 34664 Sep 22 2020 false -rwxr-xr-x 1 root root 28 Nov 9 2020 fgrep -rwxr-xr-x 1 root root 71928 Feb 7 2021 findmnt -rwsr-xr-x 1 root root 30112 Feb 26 2021 fusermount -rwxr-xr-x 1 root root 210488 Nov 9 2020 grep -rwxr-xr-x 2 root root 2346 Mar 2 2021 gunzip -rwxr-xr-x 1 root root 6376 Mar 2 2021 gzexe -rwxr-xr-x 1 root root 100952 Mar 2 2021 gzip -rwxr-xr-x 1 root root 21916 Nov 6 2019 hostname -rwxr-xr-x 1 root root 83980 Sep 22 2020 ln -rwxr-xr-x 1 root root 55572 Feb 7 2020 login -rwxr-xr-x 1 root root 153964 Sep 22 2020 ls -rwxr-xr-x 1 root root 153124 Feb 7 2021 lsblk -rwxr-xr-x 1 root root 96328 Sep 22 2020 mkdir -rwxr-xr-x 1 root root 79912 Sep 22 2020 mknod -rwxr-xr-x 1 root root 47048 Sep 22 2020 mktemp -rwxr-xr-x 1 root root 58920 Feb 7 2021 more -rwsr-xr-x 1 root root 50720 Feb 7 2021 mount -rwxr-xr-x 1 root root 13856 Feb 7 2021 mountpoint -rwxr-xr-x 1 root root 157996 Sep 22 2020 mv lrwxrwxrwx 1 root root 8 Nov 6 2019 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Apr 18 2021 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 38824 Sep 22 2020 pwd lrwxrwxrwx 1 root root 4 Jun 21 2021 rbash -> bash -rwxr-xr-x 1 root root 46984 Sep 22 2020 readlink -rwxr-xr-x 1 root root 75720 Sep 22 2020 rm -rwxr-xr-x 1 root root 46984 Sep 22 2020 rmdir -rwxr-xr-x 1 root root 22292 Sep 27 2020 run-parts -rwxr-xr-x 1 root root 125036 Dec 22 2018 sed lrwxrwxrwx 1 root root 4 Jul 26 03:47 sh -> dash -rwxr-xr-x 1 root root 34696 Sep 22 2020 sleep -rwxr-xr-x 1 root root 83880 Sep 22 2020 stty -rwsr-xr-x 1 root root 79396 Feb 7 2021 su -rwxr-xr-x 1 root root 34696 Sep 22 2020 sync -rwxr-xr-x 1 root root 602584 Feb 16 2021 tar -rwxr-xr-x 1 root root 13860 Sep 27 2020 tempfile -rwxr-xr-x 1 root root 108520 Sep 22 2020 touch -rwxr-xr-x 1 root root 34664 Sep 22 2020 true -rwxr-xr-x 1 root root 17768 Feb 26 2021 ulockmgr_server -rwsr-xr-x 1 root root 30236 Feb 7 2021 umount -rwxr-xr-x 1 root root 34664 Sep 22 2020 uname -rwxr-xr-x 2 root root 2346 Mar 2 2021 uncompress -rwxr-xr-x 1 root root 153964 Sep 22 2020 vdir -rwxr-xr-x 1 root root 63024 Feb 7 2021 wdctl lrwxrwxrwx 1 root root 8 Nov 6 2019 ypdomainname -> hostname -rwxr-xr-x 1 root root 1984 Mar 2 2021 zcat -rwxr-xr-x 1 root root 1678 Mar 2 2021 zcmp -rwxr-xr-x 1 root root 5880 Mar 2 2021 zdiff -rwxr-xr-x 1 root root 29 Mar 2 2021 zegrep -rwxr-xr-x 1 root root 29 Mar 2 2021 zfgrep -rwxr-xr-x 1 root root 2081 Mar 2 2021 zforce -rwxr-xr-x 1 root root 7585 Mar 2 2021 zgrep -rwxr-xr-x 1 root root 2206 Mar 2 2021 zless -rwxr-xr-x 1 root root 1842 Mar 2 2021 zmore -rwxr-xr-x 1 root root 4553 Mar 2 2021 znew I: user script /srv/workspace/pbuilder/27484/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: i386 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13) dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19675 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libdebhelper-perl{a} libelf1{a} libfile-stripnondeterminism-perl{a} libicu67{a} libmagic-mgc{a} libmagic1{a} libpipeline1{a} libsigsegv2{a} libsub-override-perl{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 31 newly installed, 0 to remove and 0 not upgraded. Need to get 18.6 MB of archives. After unpacking 67.9 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian bullseye/main i386 bsdextrautils i386 2.36.1-7 [148 kB] Get: 2 http://deb.debian.org/debian bullseye/main i386 libuchardet0 i386 0.0.7-1 [67.9 kB] Get: 3 http://deb.debian.org/debian bullseye/main i386 groff-base i386 1.22.4-6 [952 kB] Get: 4 http://deb.debian.org/debian bullseye/main i386 libpipeline1 i386 1.5.3-1 [36.8 kB] Get: 5 http://deb.debian.org/debian bullseye/main i386 man-db i386 2.9.4-2 [1367 kB] Get: 6 http://deb.debian.org/debian bullseye/main i386 sensible-utils all 0.0.14 [14.8 kB] Get: 7 http://deb.debian.org/debian bullseye/main i386 libmagic-mgc i386 1:5.39-3 [273 kB] Get: 8 http://deb.debian.org/debian bullseye/main i386 libmagic1 i386 1:5.39-3 [133 kB] Get: 9 http://deb.debian.org/debian bullseye/main i386 file i386 1:5.39-3 [69.0 kB] Get: 10 http://deb.debian.org/debian bullseye/main i386 gettext-base i386 0.21-4 [176 kB] Get: 11 http://deb.debian.org/debian bullseye/main i386 libsigsegv2 i386 2.13-1 [35.1 kB] Get: 12 http://deb.debian.org/debian bullseye/main i386 m4 i386 1.4.18-5 [206 kB] Get: 13 http://deb.debian.org/debian bullseye/main i386 autoconf all 2.69-14 [313 kB] Get: 14 http://deb.debian.org/debian bullseye/main i386 autotools-dev all 20180224.1+nmu1 [77.1 kB] Get: 15 http://deb.debian.org/debian bullseye/main i386 automake all 1:1.16.3-2 [814 kB] Get: 16 http://deb.debian.org/debian bullseye/main i386 autopoint all 0.21-4 [510 kB] Get: 17 http://deb.debian.org/debian bullseye/main i386 libdebhelper-perl all 13.3.4 [189 kB] Get: 18 http://deb.debian.org/debian bullseye/main i386 libtool all 2.4.6-15 [513 kB] Get: 19 http://deb.debian.org/debian bullseye/main i386 dh-autoreconf all 20 [17.1 kB] Get: 20 http://deb.debian.org/debian bullseye/main i386 libarchive-zip-perl all 1.68-1 [104 kB] Get: 21 http://deb.debian.org/debian bullseye/main i386 libsub-override-perl all 0.09-2 [10.2 kB] Get: 22 http://deb.debian.org/debian bullseye/main i386 libfile-stripnondeterminism-perl all 1.11.0-1 [25.6 kB] Get: 23 http://deb.debian.org/debian bullseye/main i386 dh-strip-nondeterminism all 1.11.0-1 [15.3 kB] Get: 24 http://deb.debian.org/debian bullseye/main i386 libelf1 i386 0.183-1 [171 kB] Get: 25 http://deb.debian.org/debian bullseye/main i386 dwz i386 0.13+20210201-1 [179 kB] Get: 26 http://deb.debian.org/debian bullseye/main i386 libicu67 i386 67.1-6 [8776 kB] Get: 27 http://deb.debian.org/debian bullseye/main i386 libxml2 i386 2.9.10+dfsg-6.7 [728 kB] Get: 28 http://deb.debian.org/debian bullseye/main i386 gettext i386 0.21-4 [1322 kB] Get: 29 http://deb.debian.org/debian bullseye/main i386 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get: 30 http://deb.debian.org/debian bullseye/main i386 po-debconf all 1.0.21+nmu1 [248 kB] Get: 31 http://deb.debian.org/debian bullseye/main i386 debhelper all 13.3.4 [1049 kB] Fetched 18.6 MB in 0s (78.1 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package bsdextrautils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19675 files and directories currently installed.) Preparing to unpack .../00-bsdextrautils_2.36.1-7_i386.deb ... Unpacking bsdextrautils (2.36.1-7) ... Selecting previously unselected package libuchardet0:i386. Preparing to unpack .../01-libuchardet0_0.0.7-1_i386.deb ... Unpacking libuchardet0:i386 (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../02-groff-base_1.22.4-6_i386.deb ... Unpacking groff-base (1.22.4-6) ... Selecting previously unselected package libpipeline1:i386. Preparing to unpack .../03-libpipeline1_1.5.3-1_i386.deb ... Unpacking libpipeline1:i386 (1.5.3-1) ... Selecting previously unselected package man-db. Preparing to unpack .../04-man-db_2.9.4-2_i386.deb ... Unpacking man-db (2.9.4-2) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../05-sensible-utils_0.0.14_all.deb ... Unpacking sensible-utils (0.0.14) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../06-libmagic-mgc_1%3a5.39-3_i386.deb ... Unpacking libmagic-mgc (1:5.39-3) ... Selecting previously unselected package libmagic1:i386. Preparing to unpack .../07-libmagic1_1%3a5.39-3_i386.deb ... Unpacking libmagic1:i386 (1:5.39-3) ... Selecting previously unselected package file. Preparing to unpack .../08-file_1%3a5.39-3_i386.deb ... Unpacking file (1:5.39-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../09-gettext-base_0.21-4_i386.deb ... Unpacking gettext-base (0.21-4) ... Selecting previously unselected package libsigsegv2:i386. Preparing to unpack .../10-libsigsegv2_2.13-1_i386.deb ... Unpacking libsigsegv2:i386 (2.13-1) ... Selecting previously unselected package m4. Preparing to unpack .../11-m4_1.4.18-5_i386.deb ... Unpacking m4 (1.4.18-5) ... Selecting previously unselected package autoconf. Preparing to unpack .../12-autoconf_2.69-14_all.deb ... Unpacking autoconf (2.69-14) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../13-autotools-dev_20180224.1+nmu1_all.deb ... Unpacking autotools-dev (20180224.1+nmu1) ... Selecting previously unselected package automake. Preparing to unpack .../14-automake_1%3a1.16.3-2_all.deb ... Unpacking automake (1:1.16.3-2) ... Selecting previously unselected package autopoint. Preparing to unpack .../15-autopoint_0.21-4_all.deb ... Unpacking autopoint (0.21-4) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../16-libdebhelper-perl_13.3.4_all.deb ... Unpacking libdebhelper-perl (13.3.4) ... Selecting previously unselected package libtool. Preparing to unpack .../17-libtool_2.4.6-15_all.deb ... Unpacking libtool (2.4.6-15) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../18-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../19-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libsub-override-perl. Preparing to unpack .../20-libsub-override-perl_0.09-2_all.deb ... Unpacking libsub-override-perl (0.09-2) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../21-libfile-stripnondeterminism-perl_1.11.0-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.11.0-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../22-dh-strip-nondeterminism_1.11.0-1_all.deb ... Unpacking dh-strip-nondeterminism (1.11.0-1) ... Selecting previously unselected package libelf1:i386. Preparing to unpack .../23-libelf1_0.183-1_i386.deb ... Unpacking libelf1:i386 (0.183-1) ... Selecting previously unselected package dwz. Preparing to unpack .../24-dwz_0.13+20210201-1_i386.deb ... Unpacking dwz (0.13+20210201-1) ... Selecting previously unselected package libicu67:i386. Preparing to unpack .../25-libicu67_67.1-6_i386.deb ... Unpacking libicu67:i386 (67.1-6) ... Selecting previously unselected package libxml2:i386. Preparing to unpack .../26-libxml2_2.9.10+dfsg-6.7_i386.deb ... Unpacking libxml2:i386 (2.9.10+dfsg-6.7) ... Selecting previously unselected package gettext. Preparing to unpack .../27-gettext_0.21-4_i386.deb ... Unpacking gettext (0.21-4) ... 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Setting up libsigsegv2:i386 (2.13-1) ... Setting up autopoint (0.21-4) ... Setting up sensible-utils (0.0.14) ... Setting up libuchardet0:i386 (0.0.7-1) ... Setting up libsub-override-perl (0.09-2) ... Setting up libelf1:i386 (0.183-1) ... Setting up libxml2:i386 (2.9.10+dfsg-6.7) ... Setting up libfile-stripnondeterminism-perl (1.11.0-1) ... Setting up gettext (0.21-4) ... Setting up libtool (2.4.6-15) ... Setting up m4 (1.4.18-5) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up autoconf (2.69-14) ... Setting up dh-strip-nondeterminism (1.11.0-1) ... Setting up dwz (0.13+20210201-1) ... Setting up groff-base (1.22.4-6) ... Setting up automake (1:1.16.3-2) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.9.4-2) ... Not building database; man-db/auto-update is not 'true'. Setting up dh-autoreconf (20) ... Setting up debhelper (13.3.4) ... Processing triggers for libc-bin (2.31-12) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/sim4-0.0.20121010/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b dpkg-buildpackage: info: source package sim4 dpkg-buildpackage: info: source version 0.0.20121010-8 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 debian/rules clean dh clean dh_auto_clean make -j18 clean make[1]: Entering directory '/build/sim4-0.0.20121010' rm -f sim4 *.o make[1]: Leaving directory '/build/sim4-0.0.20121010' dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf dh_auto_configure dh_auto_build make -j18 "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/sim4-0.0.20121010' cc -o sim4 -I. -g -O2 -fdebug-prefix-map=/build/sim4-0.0.20121010=. -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -Wall `LC_ALL=C ls *.c` -lm -Wl,-z,relro Xtend1.c:12:19: warning: 'rcsid' defined but not used [-Wunused-const-variable=] 12 | static const char rcsid[] = | ^~~~~ align.c:13:19: warning: 'rcsid' defined but not used [-Wunused-const-variable=] 13 | static const char rcsid[] = | ^~~~~ args.c:7:19: warning: 'rcsid' defined but not used [-Wunused-const-variable=] 7 | static const char rcsid[] = | ^~~~~ discrim.c:10:19: warning: 'rcsid' defined but not used [-Wunused-const-variable=] 10 | static const char rcsid[] = | ^~~~~ dna.c:9:19: warning: 'rcsid' defined but not used [-Wunused-const-variable=] 9 | static const char rcsid[] = | ^~~~~ encoding.c:52:20: warning: 'osx_linker_bug' defined but not used [-Wunused-variable] 52 | static const char *osx_linker_bug = ""; | ^~~~~~~~~~~~~~ encoding.c:3:19: warning: 'rcsid' defined but not used [-Wunused-const-variable=] 3 | static const char rcsid[] = | ^~~~~ misc.c:8:19: warning: 'rcsid' defined but not used [-Wunused-const-variable=] 8 | static const char rcsid[] = | ^~~~~ poly.c: In function 'remove_polyA_back': poly.c:108:29: warning: variable 'prev' set but not used [-Wunused-but-set-variable] 108 | Exon *t, *exons_tail, *prev; /* start from Lblock */ | ^~~~ At top level: poly.c:10:19: warning: 'rcsid' defined but not used [-Wunused-const-variable=] 10 | static const char rcsid[] = "$Id: poly.c,v 1.5 2002/03/03 23:29:48 florea Exp $"; | ^~~~~ prnt.c:10:19: warning: 'rcsid' defined but not used [-Wunused-const-variable=] 10 | static const char rcsid[] = | ^~~~~ seq.c:8:19: warning: 'rcsid' defined but not used [-Wunused-const-variable=] 8 | static const char rcsid[] = | ^~~~~ seq_read.c:9:19: warning: 'rcsid' defined but not used [-Wunused-const-variable=] 9 | static const char rcsid[] = | ^~~~~ sim4.init.c: In function 'cds_range': sim4.init.c:672:6: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 672 | if (*s!='.') fatal ("Illegal CDS specification."); s++; | ^~ sim4.init.c:672:57: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 672 | if (*s!='.') fatal ("Illegal CDS specification."); s++; | ^ sim4.init.c:673:6: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 673 | if (*s!='.') fatal ("Illegal CDS specification."); s++; | ^~ sim4.init.c:673:57: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 673 | if (*s!='.') fatal ("Illegal CDS specification."); s++; | ^ At top level: sim4.init.c:61:19: warning: 'rcsid' defined but not used [-Wunused-const-variable=] 61 | static const char rcsid[] = | ^~~~~ sim4b1.c: In function 'find_ends': sim4b1.c:1523:27: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 1523 | if (j>=j0) return (i-(j-j0)); break; | ^~ sim4b1.c:1523:57: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 1523 | if (j>=j0) return (i-(j-j0)); break; | ^~~~~ At top level: sim4b1.c:8:19: warning: 'rcsid' defined but not used [-Wunused-const-variable=] 8 | static const char rcsid[] = | ^~~~~ sim4b1.c: In function 'print_pipmaker_exons': sim4b1.c:1386:11: warning: 'To' may be used uninitialized in this function [-Wmaybe-uninitialized] 1386 | printf("+ %d %d\n", From, To); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ sim4b1.c:1386:11: warning: 'From' may be used uninitialized in this function [-Wmaybe-uninitialized] splice.c: In function 'splice': splice.c:45:67: warning: variable 'keep_Gi' set but not used [-Wunused-but-set-variable] 45 | int maxCscore, maxGscore, Gxs, Gxe, Gy, Cxs, Cxe, Cy, keep_Ci, keep_Gi; | ^~~~~~~ splice.c:45:58: warning: variable 'keep_Ci' set but not used [-Wunused-but-set-variable] 45 | int maxCscore, maxGscore, Gxs, Gxe, Gy, Cxs, Cxe, Cy, keep_Ci, keep_Gi; | ^~~~~~~ At top level: splice.c:8:19: warning: 'rcsid' defined but not used [-Wunused-const-variable=] 8 | static const char rcsid[] = | ^~~~~ make[1]: Leaving directory '/build/sim4-0.0.20121010' dh_auto_test create-stamp debian/debhelper-build-stamp dh_prep dh_installdirs dh_auto_install dh_install dh_installdocs dh_installchangelogs dh_installexamples dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'sim4' in '../sim4_0.0.20121010-8_i386.deb'. dpkg-deb: building package 'sim4-dbgsym' in '../sim4-dbgsym_0.0.20121010-8_i386.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../sim4_0.0.20121010-8_i386.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/27484 and its subdirectories I: Current time: Wed Jul 27 09:43:47 -12 2022 I: pbuilder-time-stamp: 1658958227 Thu Jun 24 15:20:48 UTC 2021 I: 1st build successful. Starting 2nd build on remote node ionos12-i386.debian.net. Thu Jun 24 15:20:48 UTC 2021 I: Preparing to do remote build '2' on ionos12-i386.debian.net. Thu Jun 24 15:24:15 UTC 2021 I: Deleting $TMPDIR on ionos12-i386.debian.net. Thu Jun 24 15:24:15 UTC 2021 I: sim4_0.0.20121010-8_i386.changes: Format: 1.8 Date: Fri, 04 Dec 2020 15:29:21 +0100 Source: sim4 Binary: sim4 sim4-dbgsym Architecture: i386 Version: 0.0.20121010-8 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: sim4 - tool for aligning cDNA and genomic DNA Closes: 962117 Changes: sim4 (0.0.20121010-8) unstable; urgency=medium . * Nelson A. de Oliveira has retired so remove him from Uploaders (thanks Nelson for your work on this package) Closes: #962117 Checksums-Sha1: f4fc03fc8271d63a90beebd8e14e1ef29cb0a723 98136 sim4-dbgsym_0.0.20121010-8_i386.deb 7faf948b6080444ecfd6fe0ac2894b5e3e513778 4848 sim4_0.0.20121010-8_i386.buildinfo 10568c83f436aa29c000399c6622f0124fecf4a1 361412 sim4_0.0.20121010-8_i386.deb Checksums-Sha256: 19ad5be540f8ad477cfcf8af28febf797893b1c1f1bdd2a621cb36756eee0638 98136 sim4-dbgsym_0.0.20121010-8_i386.deb c05d385862a1653e8ee028137a3af6a69402690e8ca4c84f9cb06c1005d637b4 4848 sim4_0.0.20121010-8_i386.buildinfo bd3d278a61457ccc33df182a90de1f2921cba4123ebff9cf35863a442b68ac69 361412 sim4_0.0.20121010-8_i386.deb Files: b9119d01bc4edfd59fd1206865de2a56 98136 debug optional sim4-dbgsym_0.0.20121010-8_i386.deb 80c6d31df2cfaad0f5b06fea817119ce 4848 science optional sim4_0.0.20121010-8_i386.buildinfo f1e66c6018560c88f4847cda601475a4 361412 science optional sim4_0.0.20121010-8_i386.deb Thu Jun 24 15:24:16 UTC 2021 I: diffoscope 172 will be used to compare the two builds: # Profiling output for: /usr/bin/diffoscope --html /srv/reproducible-results/rbuild-debian/tmp.uM98SCNJfC/sim4_0.0.20121010-8.diffoscope.html --text /srv/reproducible-results/rbuild-debian/tmp.uM98SCNJfC/sim4_0.0.20121010-8.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/tmp.uM98SCNJfC/sim4_0.0.20121010-8.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/tmp.uM98SCNJfC/b1/sim4_0.0.20121010-8_i386.changes /srv/reproducible-results/rbuild-debian/tmp.uM98SCNJfC/b2/sim4_0.0.20121010-8_i386.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.312s) 0.312s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.027s) 0.027s 10 calls diffoscope.comparators.binary.FilesystemFile 0.000s 8 calls abc.DotChangesFile Thu Jun 24 15:24:18 UTC 2021 I: diffoscope 172 found no differences in the changes files, and a .buildinfo file also exists. Thu Jun 24 15:24:18 UTC 2021 I: sim4 from bullseye built successfully and reproducibly on i386. Thu Jun 24 15:24:20 UTC 2021 I: Submitting .buildinfo files to external archives: Thu Jun 24 15:24:20 UTC 2021 I: Submitting 8.0K b1/sim4_0.0.20121010-8_i386.buildinfo.asc Thu Jun 24 15:24:20 UTC 2021 I: Submitting 8.0K b2/sim4_0.0.20121010-8_i386.buildinfo.asc Thu Jun 24 15:24:22 UTC 2021 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Thu Jun 24 15:24:22 UTC 2021 I: Done submitting .buildinfo files. Thu Jun 24 15:24:22 UTC 2021 I: Removing signed sim4_0.0.20121010-8_i386.buildinfo.asc files: removed './b1/sim4_0.0.20121010-8_i386.buildinfo.asc' removed './b2/sim4_0.0.20121010-8_i386.buildinfo.asc'