Sat Jun 5 23:54:55 UTC 2021 I: starting to build libbio-alignio-stockholm-perl/bullseye/i386 on jenkins on '2021-06-05 23:54' Sat Jun 5 23:54:55 UTC 2021 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/i386_16/14027/console.log Sat Jun 5 23:54:55 UTC 2021 I: Downloading source for bullseye/libbio-alignio-stockholm-perl=1.7.3-2 --2021-06-05 23:54:55-- http://cdn-fastly.deb.debian.org/debian/pool/main/libb/libbio-alignio-stockholm-perl/libbio-alignio-stockholm-perl_1.7.3-2.dsc Connecting to 78.137.99.97:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2284 (2.2K) Saving to: ‘libbio-alignio-stockholm-perl_1.7.3-2.dsc’ 0K .. 100% 109M=0s 2021-06-05 23:54:55 (109 MB/s) - ‘libbio-alignio-stockholm-perl_1.7.3-2.dsc’ saved [2284/2284] Sat Jun 5 23:54:55 UTC 2021 I: libbio-alignio-stockholm-perl_1.7.3-2.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: libbio-alignio-stockholm-perl Binary: libbio-alignio-stockholm-perl Architecture: all Version: 1.7.3-2 Maintainer: Debian Med Packaging Team Uploaders: Michael R. Crusoe Homepage: https://metacpan.org/release/Bio-AlignIO-stockholm Standards-Version: 4.5.0 Vcs-Browser: https://salsa.debian.org/med-team/libbio-alignio-stockholm-perl Vcs-Git: https://salsa.debian.org/med-team/libbio-alignio-stockholm-perl.git Testsuite: autopkgtest-pkg-perl Build-Depends: debhelper-compat (= 12), libbio-perl-perl, libtest-most-perl Build-Depends-Indep: perl Package-List: libbio-alignio-stockholm-perl deb perl optional arch=all Checksums-Sha1: 89ca9fbb76d58140f42d80776efbdce958454baa 37596 libbio-alignio-stockholm-perl_1.7.3.orig.tar.gz 9b80b333ca155afb28773df1dab39eec5da38f0d 1780 libbio-alignio-stockholm-perl_1.7.3-2.debian.tar.xz Checksums-Sha256: c2699f42341902bb1db2407708141d589d7b40cac4531879d7744147c35500e2 37596 libbio-alignio-stockholm-perl_1.7.3.orig.tar.gz f6f3683dc8b27bda0ecfe5cd4ce65bc01911798ed54e29a167fa7928d43cafe8 1780 libbio-alignio-stockholm-perl_1.7.3-2.debian.tar.xz Files: 47361a5c56b1efc8be723c76c342ea0d 37596 libbio-alignio-stockholm-perl_1.7.3.orig.tar.gz 6b5bada7af9da7f04f9c73591dcef594 1780 libbio-alignio-stockholm-perl_1.7.3-2.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAl5eD04RHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtGN4xAAmF4QkmTG8izvJqmRL5YXJJTSQxuaR+IS 7NwjtQxTiDOj/Jf5nQ4hAMU5+dI55TNGvRd+Cf3j5JbQRBW7i1tvRzTLMOD/PlfD CUhboORX1kcOdQUdVuNeVxLKFBTvPps0ic0ABjhbGPQFyhdoe3yPmVIkNgOpxOZw Lb5GNtmUIl1EZdRUAum3gaScWacoflW1NjNnrMi8d2Uq3c1lDjG25pdvS1BVKsmD E7rcXzz/3p8SjcpX5kEOPHZKTfE23/QmqGmOvg3tZt2DJ40ig/JHOVipCOG1c914 q4e8piis10pS+n9gW3cXoOqdRsYuXXUjHiMml94EO9jOnQh+DunBoHp+bwuFfeIN Xcv98Qmqx/10U/WXJ04mJFT4zkAV4s7WIqRBu6xUGEEAcVL4+WX4hLvkgs1xOs1n je6IP3o7B90sbhd84v3nSlnliMoNfJP3ANDgWmIwpLTBQvWRjJ50o/QZyxoGW3Rt 1qynAQXdQ6oGC6o+vQKChZM0LS4rGhwbwoLFabfoDAQdN5AjOL8Yqps7DZJIFkMz RttwU5fANbUKWXO9sJ8LKMhwHfta0+6LYveGR4BfKJKkSKiyfu14CPLLU8EUhL/b vwzoFLSN3OIkLW6XWyWPYdyPpziwWRMPmw6iKUTXq3NqEgCM7wMJjJBNvb+UI5jC kj0G9yUG5jE= =VF0H -----END PGP SIGNATURE----- Sat Jun 5 23:54:55 UTC 2021 I: Checking whether the package is not for us Sat Jun 5 23:54:55 UTC 2021 I: Starting 1st build on remote node ionos16-i386.debian.net. Sat Jun 5 23:54:55 UTC 2021 I: Preparing to do remote build '1' on ionos16-i386.debian.net. Sat Jun 5 23:55:15 UTC 2021 I: Deleting $TMPDIR on ionos16-i386.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Fri Jul 8 18:17:55 -12 2022 I: pbuilder-time-stamp: 1657347475 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bullseye-reproducible-base.tgz] I: copying local configuration I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: using eatmydata during job I: Copying source file I: copying [libbio-alignio-stockholm-perl_1.7.3-2.dsc] I: copying [./libbio-alignio-stockholm-perl_1.7.3.orig.tar.gz] I: copying [./libbio-alignio-stockholm-perl_1.7.3-2.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/tmp/dpkg-verify-sig.paKkcenI/trustedkeys.kbx': General error gpgv: Signature made Mon Mar 2 20:03:26 2020 -12 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./libbio-alignio-stockholm-perl_1.7.3-2.dsc dpkg-source: info: extracting libbio-alignio-stockholm-perl in libbio-alignio-stockholm-perl-1.7.3 dpkg-source: info: unpacking libbio-alignio-stockholm-perl_1.7.3.orig.tar.gz dpkg-source: info: unpacking libbio-alignio-stockholm-perl_1.7.3-2.debian.tar.xz I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/9199/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='i386' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=18' DISTRIBUTION='' HOME='/root' HOST_ARCH='i386' IFS=' ' INVOCATION_ID='05d6bca4d5024c15aae3dd7927dc8fe5' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' LD_LIBRARY_PATH='/usr/lib/libeatmydata' LD_PRELOAD='libeatmydata.so' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='9199' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.vUuD1I2jDy/pbuilderrc_vqTx --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.vUuD1I2jDy/b1 --logfile b1/build.log libbio-alignio-stockholm-perl_1.7.3-2.dsc' SUDO_GID='112' SUDO_UID='107' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://85.184.249.68:3128' I: uname -a Linux ionos16-i386 4.19.0-16-amd64 #1 SMP Debian 4.19.181-1 (2021-03-19) x86_64 GNU/Linux I: ls -l /bin total 5776 -rwxr-xr-x 1 root root 1367848 Feb 24 2021 bash -rwxr-xr-x 3 root root 38280 Jul 20 2020 bunzip2 -rwxr-xr-x 3 root root 38280 Jul 20 2020 bzcat lrwxrwxrwx 1 root root 6 Jul 20 2020 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2225 Jul 20 2020 bzdiff lrwxrwxrwx 1 root root 6 Jul 20 2020 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4877 Sep 4 2019 bzexe lrwxrwxrwx 1 root root 6 Jul 20 2020 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3775 Jul 20 2020 bzgrep -rwxr-xr-x 3 root root 38280 Jul 20 2020 bzip2 -rwxr-xr-x 1 root root 17768 Jul 20 2020 bzip2recover lrwxrwxrwx 1 root root 6 Jul 20 2020 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Jul 20 2020 bzmore -rwxr-xr-x 1 root root 38824 Sep 22 2020 cat -rwxr-xr-x 1 root root 71624 Sep 22 2020 chgrp -rwxr-xr-x 1 root root 67528 Sep 22 2020 chmod -rwxr-xr-x 1 root root 75752 Sep 22 2020 chown -rwxr-xr-x 1 root root 157960 Sep 22 2020 cp -rwxr-xr-x 1 root root 128724 Dec 10 2020 dash -rwxr-xr-x 1 root root 124904 Sep 22 2020 date -rwxr-xr-x 1 root root 92172 Sep 22 2020 dd -rwxr-xr-x 1 root root 100752 Sep 22 2020 df -rwxr-xr-x 1 root root 153964 Sep 22 2020 dir -rwxr-xr-x 1 root root 83644 Feb 7 2021 dmesg lrwxrwxrwx 1 root root 8 Nov 6 2019 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Nov 6 2019 domainname -> hostname -rwxr-xr-x 1 root root 34664 Sep 22 2020 echo -rwxr-xr-x 1 root root 28 Nov 9 2020 egrep -rwxr-xr-x 1 root root 34664 Sep 22 2020 false -rwxr-xr-x 1 root root 28 Nov 9 2020 fgrep -rwxr-xr-x 1 root root 71928 Feb 7 2021 findmnt -rwsr-xr-x 1 root root 30112 Feb 26 2021 fusermount -rwxr-xr-x 1 root root 210488 Nov 9 2020 grep -rwxr-xr-x 2 root root 2346 Mar 2 2021 gunzip -rwxr-xr-x 1 root root 6376 Mar 2 2021 gzexe -rwxr-xr-x 1 root root 100952 Mar 2 2021 gzip -rwxr-xr-x 1 root root 21916 Nov 6 2019 hostname -rwxr-xr-x 1 root root 83980 Sep 22 2020 ln -rwxr-xr-x 1 root root 55572 Feb 7 2020 login -rwxr-xr-x 1 root root 153964 Sep 22 2020 ls -rwxr-xr-x 1 root root 153124 Feb 7 2021 lsblk -rwxr-xr-x 1 root root 96328 Sep 22 2020 mkdir -rwxr-xr-x 1 root root 79912 Sep 22 2020 mknod -rwxr-xr-x 1 root root 47048 Sep 22 2020 mktemp -rwxr-xr-x 1 root root 58920 Feb 7 2021 more -rwsr-xr-x 1 root root 50720 Feb 7 2021 mount -rwxr-xr-x 1 root root 13856 Feb 7 2021 mountpoint -rwxr-xr-x 1 root root 157996 Sep 22 2020 mv lrwxrwxrwx 1 root root 8 Nov 6 2019 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Apr 18 2021 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 38824 Sep 22 2020 pwd lrwxrwxrwx 1 root root 4 Feb 24 2021 rbash -> bash -rwxr-xr-x 1 root root 46984 Sep 22 2020 readlink -rwxr-xr-x 1 root root 75720 Sep 22 2020 rm -rwxr-xr-x 1 root root 46984 Sep 22 2020 rmdir -rwxr-xr-x 1 root root 22292 Sep 27 2020 run-parts -rwxr-xr-x 1 root root 125036 Dec 22 2018 sed lrwxrwxrwx 1 root root 4 Jul 7 03:46 sh -> dash -rwxr-xr-x 1 root root 34696 Sep 22 2020 sleep -rwxr-xr-x 1 root root 83880 Sep 22 2020 stty -rwsr-xr-x 1 root root 79396 Feb 7 2021 su -rwxr-xr-x 1 root root 34696 Sep 22 2020 sync -rwxr-xr-x 1 root root 602584 Feb 16 2021 tar -rwxr-xr-x 1 root root 13860 Sep 27 2020 tempfile -rwxr-xr-x 1 root root 108520 Sep 22 2020 touch -rwxr-xr-x 1 root root 34664 Sep 22 2020 true -rwxr-xr-x 1 root root 17768 Feb 26 2021 ulockmgr_server -rwsr-xr-x 1 root root 30236 Feb 7 2021 umount -rwxr-xr-x 1 root root 34664 Sep 22 2020 uname -rwxr-xr-x 2 root root 2346 Mar 2 2021 uncompress -rwxr-xr-x 1 root root 153964 Sep 22 2020 vdir -rwxr-xr-x 1 root root 63024 Feb 7 2021 wdctl lrwxrwxrwx 1 root root 8 Nov 6 2019 ypdomainname -> hostname -rwxr-xr-x 1 root root 1984 Mar 2 2021 zcat -rwxr-xr-x 1 root root 1678 Mar 2 2021 zcmp -rwxr-xr-x 1 root root 5880 Mar 2 2021 zdiff -rwxr-xr-x 1 root root 29 Mar 2 2021 zegrep -rwxr-xr-x 1 root root 29 Mar 2 2021 zfgrep -rwxr-xr-x 1 root root 2081 Mar 2 2021 zforce -rwxr-xr-x 1 root root 7585 Mar 2 2021 zgrep -rwxr-xr-x 1 root root 2206 Mar 2 2021 zless -rwxr-xr-x 1 root root 1842 Mar 2 2021 zmore -rwxr-xr-x 1 root root 4553 Mar 2 2021 znew I: user script /srv/workspace/pbuilder/9199/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: i386 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 12), libbio-perl-perl, libtest-most-perl, perl dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19675 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 12); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on libbio-perl-perl; however: Package libbio-perl-perl is not installed. pbuilder-satisfydepends-dummy depends on libtest-most-perl; however: Package libtest-most-perl is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libalgorithm-diff-perl{a} libarchive-zip-perl{a} libbio-perl-perl{a} libcapture-tiny-perl{a} libclass-data-inheritable-perl{a} libdata-stag-perl{a} libdebhelper-perl{a} libdevel-stacktrace-perl{a} libelf1{a} libexception-class-perl{a} libfile-stripnondeterminism-perl{a} libicu67{a} libio-string-perl{a} libmagic-mgc{a} libmagic1{a} libpipeline1{a} libsigsegv2{a} libsub-override-perl{a} libsub-uplevel-perl{a} libtest-deep-perl{a} libtest-differences-perl{a} libtest-exception-perl{a} libtest-most-perl{a} libtest-warn-perl{a} libtext-diff-perl{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: bioperl-run curl libace-perl libalgorithm-diff-xs-perl libalgorithm-munkres-perl libarchive-cpio-perl libarray-compare-perl libbio-asn1-entrezgene-perl libbio-perl-run-perl libclone-perl libconvert-binary-c-perl libdbd-mysql-perl libdbd-pg-perl libdbd-sqlite3-perl libgd-perl libgraph-perl libgraphviz-perl libhtml-parser-perl libhtml-tableextract-perl liblist-moreutils-perl libltdl-dev libmail-sendmail-perl libmldbm-perl libpostscript-perl libset-scalar-perl libsoap-lite-perl libsort-naturally-perl libspreadsheet-parseexcel-perl libspreadsheet-writeexcel-perl libsvg-graph-perl libsvg-perl liburi-perl libwww-perl libxml-dom-xpath-perl libxml-libxml-perl libxml-libxslt-perl libxml-parser-perl libxml-perl libxml-sax-perl libxml-sax-writer-perl libxml-simple-perl libxml-twig-perl libxml-writer-perl lynx perl-tk wget 0 packages upgraded, 46 newly installed, 0 to remove and 0 not upgraded. Need to get 21.9 MB of archives. After unpacking 78.2 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian bullseye/main i386 bsdextrautils i386 2.36.1-7 [148 kB] Get: 2 http://deb.debian.org/debian bullseye/main i386 libuchardet0 i386 0.0.7-1 [67.9 kB] Get: 3 http://deb.debian.org/debian bullseye/main i386 groff-base i386 1.22.4-6 [952 kB] Get: 4 http://deb.debian.org/debian bullseye/main i386 libpipeline1 i386 1.5.3-1 [36.8 kB] Get: 5 http://deb.debian.org/debian bullseye/main i386 man-db i386 2.9.4-2 [1367 kB] Get: 6 http://deb.debian.org/debian bullseye/main i386 sensible-utils all 0.0.14 [14.8 kB] Get: 7 http://deb.debian.org/debian bullseye/main i386 libmagic-mgc i386 1:5.39-3 [273 kB] Get: 8 http://deb.debian.org/debian bullseye/main i386 libmagic1 i386 1:5.39-3 [133 kB] Get: 9 http://deb.debian.org/debian bullseye/main i386 file i386 1:5.39-3 [69.0 kB] Get: 10 http://deb.debian.org/debian bullseye/main i386 gettext-base i386 0.21-4 [176 kB] Get: 11 http://deb.debian.org/debian bullseye/main i386 libsigsegv2 i386 2.13-1 [35.1 kB] Get: 12 http://deb.debian.org/debian bullseye/main i386 m4 i386 1.4.18-5 [206 kB] Get: 13 http://deb.debian.org/debian bullseye/main i386 autoconf all 2.69-14 [313 kB] Get: 14 http://deb.debian.org/debian bullseye/main i386 autotools-dev all 20180224.1+nmu1 [77.1 kB] Get: 15 http://deb.debian.org/debian bullseye/main i386 automake all 1:1.16.3-2 [814 kB] Get: 16 http://deb.debian.org/debian bullseye/main i386 autopoint all 0.21-4 [510 kB] Get: 17 http://deb.debian.org/debian bullseye/main i386 libdebhelper-perl all 13.3.4 [189 kB] Get: 18 http://deb.debian.org/debian bullseye/main i386 libtool all 2.4.6-15 [513 kB] Get: 19 http://deb.debian.org/debian bullseye/main i386 dh-autoreconf all 20 [17.1 kB] Get: 20 http://deb.debian.org/debian bullseye/main i386 libarchive-zip-perl all 1.68-1 [104 kB] Get: 21 http://deb.debian.org/debian bullseye/main i386 libsub-override-perl all 0.09-2 [10.2 kB] Get: 22 http://deb.debian.org/debian bullseye/main i386 libfile-stripnondeterminism-perl all 1.11.0-1 [25.6 kB] Get: 23 http://deb.debian.org/debian bullseye/main i386 dh-strip-nondeterminism all 1.11.0-1 [15.3 kB] Get: 24 http://deb.debian.org/debian bullseye/main i386 libelf1 i386 0.183-1 [171 kB] Get: 25 http://deb.debian.org/debian bullseye/main i386 dwz i386 0.13+20210201-1 [179 kB] Get: 26 http://deb.debian.org/debian bullseye/main i386 libicu67 i386 67.1-6 [8776 kB] Get: 27 http://deb.debian.org/debian bullseye/main i386 libxml2 i386 2.9.10+dfsg-6.7 [728 kB] Get: 28 http://deb.debian.org/debian bullseye/main i386 gettext i386 0.21-4 [1322 kB] Get: 29 http://deb.debian.org/debian bullseye/main i386 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get: 30 http://deb.debian.org/debian bullseye/main i386 po-debconf all 1.0.21+nmu1 [248 kB] Get: 31 http://deb.debian.org/debian bullseye/main i386 debhelper all 13.3.4 [1049 kB] Get: 32 http://deb.debian.org/debian bullseye/main i386 libalgorithm-diff-perl all 1.201-1 [43.3 kB] Get: 33 http://deb.debian.org/debian bullseye/main i386 libio-string-perl all 1.08-3.1 [11.8 kB] Get: 34 http://deb.debian.org/debian bullseye/main i386 libdata-stag-perl all 0.14-2 [448 kB] Get: 35 http://deb.debian.org/debian bullseye/main i386 libbio-perl-perl all 1.7.7-2 [2607 kB] Get: 36 http://deb.debian.org/debian bullseye/main i386 libcapture-tiny-perl all 0.48-1 [26.0 kB] Get: 37 http://deb.debian.org/debian bullseye/main i386 libclass-data-inheritable-perl all 0.08-3 [8588 B] Get: 38 http://deb.debian.org/debian bullseye/main i386 libdevel-stacktrace-perl all 2.0400-1 [28.6 kB] Get: 39 http://deb.debian.org/debian bullseye/main i386 libexception-class-perl all 1.44-1 [32.3 kB] Get: 40 http://deb.debian.org/debian bullseye/main i386 libsub-uplevel-perl all 0.2800-1.1 [16.5 kB] Get: 41 http://deb.debian.org/debian bullseye/main i386 libtest-deep-perl all 1.130-1 [49.3 kB] Get: 42 http://deb.debian.org/debian bullseye/main i386 libtext-diff-perl all 1.45-1 [27.7 kB] Get: 43 http://deb.debian.org/debian bullseye/main i386 libtest-differences-perl all 0.67-1 [18.7 kB] Get: 44 http://deb.debian.org/debian bullseye/main i386 libtest-exception-perl all 0.43-1 [18.7 kB] Get: 45 http://deb.debian.org/debian bullseye/main i386 libtest-warn-perl all 0.36-1 [16.2 kB] Get: 46 http://deb.debian.org/debian bullseye/main i386 libtest-most-perl all 0.37-1 [24.9 kB] Fetched 21.9 MB in 0s (80.4 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package bsdextrautils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19675 files and directories currently installed.) Preparing to unpack .../00-bsdextrautils_2.36.1-7_i386.deb ... Unpacking bsdextrautils (2.36.1-7) ... Selecting previously unselected package libuchardet0:i386. Preparing to unpack .../01-libuchardet0_0.0.7-1_i386.deb ... Unpacking libuchardet0:i386 (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../02-groff-base_1.22.4-6_i386.deb ... 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Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/libbio-alignio-stockholm-perl-1.7.3/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b dpkg-buildpackage: info: source package libbio-alignio-stockholm-perl dpkg-buildpackage: info: source version 1.7.3-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 debian/rules clean dh clean dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf dh_auto_configure perl Makefile.PL INSTALLDIRS=vendor "OPTIMIZE=-g -O2 -fdebug-prefix-map=/build/libbio-alignio-stockholm-perl-1.7.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2" "LD=i686-linux-gnu-gcc -g -O2 -fdebug-prefix-map=/build/libbio-alignio-stockholm-perl-1.7.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro" Checking if your kit is complete... Looks good Generating a Unix-style Makefile Writing Makefile for Bio::AlignIO::stockholm Writing MYMETA.yml and MYMETA.json dh_auto_build make -j18 make[1]: Entering directory '/build/libbio-alignio-stockholm-perl-1.7.3' cp lib/Bio/Index/Stockholm.pm blib/lib/Bio/Index/Stockholm.pm cp lib/Bio/AlignIO/stockholm.pm blib/lib/Bio/AlignIO/stockholm.pm Manifying 2 pod documents make[1]: Leaving directory '/build/libbio-alignio-stockholm-perl-1.7.3' dh_auto_test make -j18 test TEST_VERBOSE=1 make[1]: Entering directory '/build/libbio-alignio-stockholm-perl-1.7.3' PERL_DL_NONLAZY=1 "/usr/bin/perl" "-MExtUtils::Command::MM" "-MTest::Harness" "-e" "undef *Test::Harness::Switches; test_harness(1, 'blib/lib', 'blib/arch')" t/*.t t/00-compile.t ........... 1..2 ok 1 - Bio/AlignIO/stockholm.pm loaded ok ok 2 - Bio/Index/Stockholm.pm loaded ok ok t/AlignIO.t .............. 1..87 ok 1 - use Bio::AlignIO::stockholm; ok 2 - An object of class 'Bio::AlignIO::stockholm' isa 'Bio::AlignIO' ok 3 - An object of class 'Bio::SimpleAlign' isa 'Bio::Align::AlignI' ok 4 ok 5 ok 6 ok 7 ok 8 ok 9 - An object of class 'Bio::Annotation::Comment' isa 'Bio::Annotation::Comment' ok 10 - Stockholm annotation ok 11 - Stockholm annotation ok 12 - stockholm output test ok 13 - An object of class 'Bio::SimpleAlign' isa 'Bio::Align::AlignI' ok 14 ok 15 ok 16 ok 17 ok 18 ok 19 ok 20 - 'Stockholm annotation' isa 'Bio::Annotation::Reference' ok 21 - Stockholm annotation ok 22 - Stockholm annotation ok 23 - Stockholm annotation ok 24 - Stockholm annotation ok 25 - An object of class 'Bio::Seq::Meta' isa 'Bio::Seq::MetaI' ok 26 - Rfam meta data ok 27 - Rfam meta data ok 28 ok 29 - An object of class 'Bio::SimpleAlign' isa 'Bio::Align::AlignI' ok 30 ok 31 ok 32 ok 33 ok 34 ok 35 - An object of class 'Bio::Seq::Meta' isa 'Bio::Seq::MetaI' ok 36 - Rfam meta data ok 37 - Rfam meta data ok 38 - An object of class 'Bio::AlignIO::stockholm' isa 'Bio::AlignIO' ok 39 ok 40 - An object of class 'Bio::SimpleAlign' isa 'Bio::Align::AlignI' ok 41 ok 42 ok 43 ok 44 ok 45 - An object of class 'Bio::Annotation::SimpleValue' isa 'Bio::Annotation::SimpleValue' ok 46 - Pfam annotation ok 47 ok 48 - An object of class 'Bio::SimpleAlign' isa 'Bio::Align::AlignI' ok 49 ok 50 ok 51 ok 52 ok 53 - An object of class 'Bio::SimpleAlign' isa 'Bio::Align::AlignI' ok 54 ok 55 ok 56 ok 57 ok 58 ok 59 - An object of class 'Bio::Seq::Meta' isa 'Bio::Seq::MetaI' ok 60 - Pfam aln meta data ok 61 - Pfam aln meta data ok 62 - Pfam aln meta data ok 63 - Pfam aln meta data ok 64 - Pfam aln meta data ok 65 - Pfam aln meta data ok 66 - Pfam seq meta data ok 67 - Pfam seq meta data ok 68 - Pfam seq meta data ok 69 - Pfam seq meta data ok 70 ok 71 - An object of class 'Bio::SeqFeature::Generic' isa 'Bio::SeqFeatureI' ok 72 - An object of class 'Bio::Seq::Meta' isa 'Bio::Seq::Meta' ok 73 - An object of class 'Bio::Annotation::Target' isa 'Bio::AnnotationI' ok 74 - An object of class 'Bio::Annotation::Target' isa 'Bio::Annotation::DBLink' ok 75 ok 76 ok 77 ok 78 ok 79 ok 80 ok 81 ok 82 ok 83 ok 84 ok 85 ok 86 ok 87 ok t/author-eol.t ........... skipped: these tests are for testing by the author t/author-mojibake.t ...... skipped: these tests are for testing by the author t/author-pod-coverage.t .. skipped: these tests are for testing by the author t/author-pod-syntax.t .... skipped: these tests are for testing by the author t/Index.t ................ 1..4 ok 1 - use Bio::Index::Stockholm; ok 2 - An object of class 'Bio::Index::Stockholm' isa 'Bio::Index::Stockholm' ok 3 ok 4 - An object of class 'Bio::SimpleAlign' isa 'Bio::SimpleAlign' ok All tests successful. Files=7, Tests=93, 1 wallclock secs ( 0.02 usr 0.00 sys + 0.64 cusr 0.04 csys = 0.70 CPU) Result: PASS make[1]: Leaving directory '/build/libbio-alignio-stockholm-perl-1.7.3' create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install make -j18 install DESTDIR=/build/libbio-alignio-stockholm-perl-1.7.3/debian/libbio-alignio-stockholm-perl AM_UPDATE_INFO_DIR=no PREFIX=/usr make[1]: Entering directory '/build/libbio-alignio-stockholm-perl-1.7.3' Manifying 2 pod documents Installing /build/libbio-alignio-stockholm-perl-1.7.3/debian/libbio-alignio-stockholm-perl/usr/share/perl5/Bio/AlignIO/stockholm.pm Installing /build/libbio-alignio-stockholm-perl-1.7.3/debian/libbio-alignio-stockholm-perl/usr/share/perl5/Bio/Index/Stockholm.pm Installing /build/libbio-alignio-stockholm-perl-1.7.3/debian/libbio-alignio-stockholm-perl/usr/share/man/man3/Bio::Index::Stockholm.3pm Installing /build/libbio-alignio-stockholm-perl-1.7.3/debian/libbio-alignio-stockholm-perl/usr/share/man/man3/Bio::AlignIO::stockholm.3pm make[1]: Leaving directory '/build/libbio-alignio-stockholm-perl-1.7.3' dh_installdocs dh_installchangelogs dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'libbio-alignio-stockholm-perl' in '../libbio-alignio-stockholm-perl_1.7.3-2_all.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../libbio-alignio-stockholm-perl_1.7.3-2_i386.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/9199 and its subdirectories I: Current time: Fri Jul 8 18:18:13 -12 2022 I: pbuilder-time-stamp: 1657347493 Sat Jun 5 23:55:15 UTC 2021 I: 1st build successful. Starting 2nd build on remote node ionos12-i386.debian.net. Sat Jun 5 23:55:15 UTC 2021 I: Preparing to do remote build '2' on ionos12-i386.debian.net. Sun Jun 6 00:02:50 UTC 2021 I: Deleting $TMPDIR on ionos12-i386.debian.net. Sun Jun 6 00:02:50 UTC 2021 I: libbio-alignio-stockholm-perl_1.7.3-2_i386.changes: Format: 1.8 Date: Tue, 03 Mar 2020 09:00:01 +0100 Source: libbio-alignio-stockholm-perl Binary: libbio-alignio-stockholm-perl Architecture: all Version: 1.7.3-2 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: libbio-alignio-stockholm-perl - stockholm sequence input/output stream Closes: 952747 Changes: libbio-alignio-stockholm-perl (1.7.3-2) unstable; urgency=medium . * Team upload. * Add missing Breaks+Replaces: libbio-perl-perl (<< 1.7.3) Closes: #952747 * Add salsa-ci file (routine-update) Checksums-Sha1: 20828acc610a62f4939b0704e27bbcb3bb5f54c9 23072 libbio-alignio-stockholm-perl_1.7.3-2_all.deb 47b93a4a3e55168e312babb1c11b6d1e5ea26be8 5199 libbio-alignio-stockholm-perl_1.7.3-2_i386.buildinfo Checksums-Sha256: d7af0ee291623e17a359443f29a54c9ddb0668f34fac8bbdb80f4fa925f82e01 23072 libbio-alignio-stockholm-perl_1.7.3-2_all.deb 03bd817c3376381908ab0bd136fdc475592425d834ab855f6f66ed940e7c4811 5199 libbio-alignio-stockholm-perl_1.7.3-2_i386.buildinfo Files: 89fa9471453d0b097a9dbdb1af9bae57 23072 perl optional libbio-alignio-stockholm-perl_1.7.3-2_all.deb d605764a0807bfef5621f3c0e7749ddf 5199 perl optional libbio-alignio-stockholm-perl_1.7.3-2_i386.buildinfo Sun Jun 6 00:02:51 UTC 2021 I: diffoscope 172 will be used to compare the two builds: # Profiling output for: /usr/bin/diffoscope --html /srv/reproducible-results/rbuild-debian/tmp.vUuD1I2jDy/libbio-alignio-stockholm-perl_1.7.3-2.diffoscope.html --text /srv/reproducible-results/rbuild-debian/tmp.vUuD1I2jDy/libbio-alignio-stockholm-perl_1.7.3-2.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/tmp.vUuD1I2jDy/libbio-alignio-stockholm-perl_1.7.3-2.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/tmp.vUuD1I2jDy/b1/libbio-alignio-stockholm-perl_1.7.3-2_i386.changes /srv/reproducible-results/rbuild-debian/tmp.vUuD1I2jDy/b2/libbio-alignio-stockholm-perl_1.7.3-2_i386.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.256s) 0.256s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.016s) 0.015s 10 calls diffoscope.comparators.binary.FilesystemFile 0.000s 8 calls abc.DotChangesFile Sun Jun 6 00:02:53 UTC 2021 I: diffoscope 172 found no differences in the changes files, and a .buildinfo file also exists. Sun Jun 6 00:02:53 UTC 2021 I: libbio-alignio-stockholm-perl from bullseye built successfully and reproducibly on i386. Sun Jun 6 00:02:54 UTC 2021 I: Submitting .buildinfo files to external archives: Sun Jun 6 00:02:54 UTC 2021 I: Submitting 8.0K b1/libbio-alignio-stockholm-perl_1.7.3-2_i386.buildinfo.asc Sun Jun 6 00:02:56 UTC 2021 I: Submitting 8.0K b2/libbio-alignio-stockholm-perl_1.7.3-2_i386.buildinfo.asc Sun Jun 6 00:02:58 UTC 2021 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Sun Jun 6 00:02:58 UTC 2021 I: Done submitting .buildinfo files. Sun Jun 6 00:02:58 UTC 2021 I: Removing signed libbio-alignio-stockholm-perl_1.7.3-2_i386.buildinfo.asc files: removed './b1/libbio-alignio-stockholm-perl_1.7.3-2_i386.buildinfo.asc' removed './b2/libbio-alignio-stockholm-perl_1.7.3-2_i386.buildinfo.asc'