Thu May 20 03:31:26 UTC 2021 I: starting to build ctdconverter/bullseye/i386 on jenkins on '2021-05-20 03:31' Thu May 20 03:31:26 UTC 2021 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/i386_3/8401/console.log Thu May 20 03:31:26 UTC 2021 I: Downloading source for bullseye/ctdconverter=2.1-3 --2021-05-20 03:31:26-- http://cdn-fastly.deb.debian.org/debian/pool/main/c/ctdconverter/ctdconverter_2.1-3.dsc Connecting to 78.137.99.97:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2138 (2.1K) Saving to: ‘ctdconverter_2.1-3.dsc’ 0K .. 100% 43.9M=0s 2021-05-20 03:31:28 (43.9 MB/s) - ‘ctdconverter_2.1-3.dsc’ saved [2138/2138] Thu May 20 03:31:28 UTC 2021 I: ctdconverter_2.1-3.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: ctdconverter Binary: ctdconverter Architecture: all Version: 2.1-3 Maintainer: Debian Med Packaging Team Uploaders: Michael R. Crusoe Homepage: https://github.com/WorkflowConversion/CTDConverter Standards-Version: 4.5.0 Vcs-Browser: https://salsa.debian.org/med-team/ctdconverter Vcs-Git: https://salsa.debian.org/med-team/ctdconverter.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13), dh-python, python3, python3-setuptools, python3-pkg-resources, python3-lxml, python3-ruamel.yaml, python3-ctdopts, help2man, 2to3 Package-List: ctdconverter deb science optional arch=all Checksums-Sha1: 145ec9dd465829165122b821011f3647cc3d7b98 38112 ctdconverter_2.1.orig.tar.gz d5859207f72e9eca9837ed32fba0d8cccabd0f3b 7216 ctdconverter_2.1-3.debian.tar.xz Checksums-Sha256: 3449a86f292bf9760103b6b33dfe1b35c36469f84dfb1fb204fac355c45a2a57 38112 ctdconverter_2.1.orig.tar.gz 0f3792b044b8fba1c468cd837bb3b7f8728c8212b9cc617e37d54709d7c42b3b 7216 ctdconverter_2.1-3.debian.tar.xz Files: ca7d31fba1e4ac94ca8231752476884b 38112 ctdconverter_2.1.orig.tar.gz 43bdb2ba49649ff929fe9c9c9a5a7694 7216 ctdconverter_2.1-3.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAl91r2MRHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtEgCw/8C3rSGtI19sOI7GUlrzmBuwGxpI1AUjlS c31l8VSiwQ03sL4NLC7zjryqmuMOYtQaFyCPLfd2Ec19Km4n9CQgwUSmErBuz8sR cE91oAsKM+HH9B+MNWX5LIf7J5nnxKGQot2HFUN/e2mPOzCv4/Xb3V2BQVwpgH0k U9pOE7tC+UZQcKB8bcp/ZKfUTInSsccutOOP3VEXKE3RIpXqpRVz10KD78tI8f8T kfmruHkmnOxFxdKb9AdmyQ3KDyNRwqIQDbN145Ye3MewUIjXBZIxCg/eMZiqzdz2 +uk6xp/RuACiiJP65i8De5e4EPBaD15PKjFxgiOhACSZ1kvMNQc6Zb1EIgXuW624 wKG7emMbX1P4lub/cdcCpP3aaCAYro6J5C5v0utSxlPFd4ESik1u8qYX/NDy4OHQ T2b3q/sTGyPSzk3q6NsQovuOc6jnlv1kzRm8naCAl5ey8vJN5pne4CeDLv2qjbuA NvnIuNLew6QN0T1Low79/EC7I3T9nb7de6h0JZAP2t2JFE/Qx5U4WM3W3CkDwaEo /ynkdh5J1L7qxQAanXl8nK27392t/1yEvTiAp5y9ad5zTAwhhNR/7WkAxk7/f6Qd JrBydp6XRjlpxkuM5aTdLTJm39NgkJE4B91lIlOX7PlGt8dbwbknJM2TWZxOQrSU PawlpU9Py/c= =+I1x -----END PGP SIGNATURE----- Thu May 20 03:31:28 UTC 2021 I: Checking whether the package is not for us Thu May 20 03:31:28 UTC 2021 I: Starting 1st build on remote node ionos2-i386.debian.net. Thu May 20 03:31:28 UTC 2021 I: Preparing to do remote build '1' on ionos2-i386.debian.net. Thu May 20 03:35:26 UTC 2021 I: Deleting $TMPDIR on ionos2-i386.debian.net. unshare: unshare failed: Cannot allocate memory W: pbuilder: unshare CLONE_NEWNET not available I: pbuilder: network access is available during build! I: Current time: Wed May 19 15:31:34 -12 2021 I: pbuilder-time-stamp: 1621481494 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bullseye-reproducible-base.tgz] I: copying local configuration I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: using eatmydata during job I: Copying source file I: copying [ctdconverter_2.1-3.dsc] I: copying [./ctdconverter_2.1.orig.tar.gz] I: copying [./ctdconverter_2.1-3.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/tmp/dpkg-verify-sig.vc_47jXN/trustedkeys.kbx': General error gpgv: Signature made Wed Sep 30 22:28:51 2020 -12 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./ctdconverter_2.1-3.dsc dpkg-source: info: extracting ctdconverter in ctdconverter-2.1 dpkg-source: info: unpacking ctdconverter_2.1.orig.tar.gz dpkg-source: info: unpacking ctdconverter_2.1-3.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying add_setup.py.patch dpkg-source: info: applying upgrade_deprecated_strip dpkg-source: info: applying correct_name dpkg-source: info: applying py3_compat I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/25125/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='i386' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=10' DISTRIBUTION='' HOME='/root' HOST_ARCH='i386' IFS=' ' INVOCATION_ID='415f80d5315c4d2d889634ab9486a87d' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' LD_LIBRARY_PATH='/usr/lib/libeatmydata' LD_PRELOAD='libeatmydata.so' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='25125' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.OEog5ITAvl/pbuilderrc_DURb --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.OEog5ITAvl/b1 --logfile b1/build.log ctdconverter_2.1-3.dsc' SUDO_GID='112' SUDO_UID='107' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://78.137.99.97:3128' I: uname -a Linux ionos2-i386 4.19.0-16-686-pae #1 SMP Debian 4.19.181-1 (2021-03-19) i686 GNU/Linux I: ls -l /bin total 5776 -rwxr-xr-x 1 root root 1367848 Feb 24 08:57 bash -rwxr-xr-x 3 root root 38280 Jul 20 2020 bunzip2 -rwxr-xr-x 3 root root 38280 Jul 20 2020 bzcat lrwxrwxrwx 1 root root 6 Jul 20 2020 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2225 Jul 20 2020 bzdiff lrwxrwxrwx 1 root root 6 Jul 20 2020 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4877 Sep 4 2019 bzexe lrwxrwxrwx 1 root root 6 Jul 20 2020 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3775 Jul 20 2020 bzgrep -rwxr-xr-x 3 root root 38280 Jul 20 2020 bzip2 -rwxr-xr-x 1 root root 17768 Jul 20 2020 bzip2recover lrwxrwxrwx 1 root root 6 Jul 20 2020 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Jul 20 2020 bzmore -rwxr-xr-x 1 root root 38824 Sep 22 2020 cat -rwxr-xr-x 1 root root 71624 Sep 22 2020 chgrp -rwxr-xr-x 1 root root 67528 Sep 22 2020 chmod -rwxr-xr-x 1 root root 75752 Sep 22 2020 chown -rwxr-xr-x 1 root root 157960 Sep 22 2020 cp -rwxr-xr-x 1 root root 128724 Dec 10 01:23 dash -rwxr-xr-x 1 root root 124904 Sep 22 2020 date -rwxr-xr-x 1 root root 92172 Sep 22 2020 dd -rwxr-xr-x 1 root root 100752 Sep 22 2020 df -rwxr-xr-x 1 root root 153964 Sep 22 2020 dir -rwxr-xr-x 1 root root 83644 Feb 7 02:38 dmesg lrwxrwxrwx 1 root root 8 Nov 6 2019 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Nov 6 2019 domainname -> hostname -rwxr-xr-x 1 root root 34664 Sep 22 2020 echo -rwxr-xr-x 1 root root 28 Nov 9 2020 egrep -rwxr-xr-x 1 root root 34664 Sep 22 2020 false -rwxr-xr-x 1 root root 28 Nov 9 2020 fgrep -rwxr-xr-x 1 root root 71928 Feb 7 02:38 findmnt -rwsr-xr-x 1 root root 30112 Feb 26 04:12 fusermount -rwxr-xr-x 1 root root 210488 Nov 9 2020 grep -rwxr-xr-x 2 root root 2346 Mar 2 11:30 gunzip -rwxr-xr-x 1 root root 6376 Mar 2 11:30 gzexe -rwxr-xr-x 1 root root 100952 Mar 2 11:30 gzip -rwxr-xr-x 1 root root 21916 Nov 6 2019 hostname -rwxr-xr-x 1 root root 83980 Sep 22 2020 ln -rwxr-xr-x 1 root root 55572 Feb 7 2020 login -rwxr-xr-x 1 root root 153964 Sep 22 2020 ls -rwxr-xr-x 1 root root 153124 Feb 7 02:38 lsblk -rwxr-xr-x 1 root root 96328 Sep 22 2020 mkdir -rwxr-xr-x 1 root root 79912 Sep 22 2020 mknod -rwxr-xr-x 1 root root 47048 Sep 22 2020 mktemp -rwxr-xr-x 1 root root 58920 Feb 7 02:38 more -rwsr-xr-x 1 root root 50720 Feb 7 02:38 mount -rwxr-xr-x 1 root root 13856 Feb 7 02:38 mountpoint -rwxr-xr-x 1 root root 157996 Sep 22 2020 mv lrwxrwxrwx 1 root root 8 Nov 6 2019 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Apr 18 03:38 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 38824 Sep 22 2020 pwd lrwxrwxrwx 1 root root 4 Feb 24 08:57 rbash -> bash -rwxr-xr-x 1 root root 46984 Sep 22 2020 readlink -rwxr-xr-x 1 root root 75720 Sep 22 2020 rm -rwxr-xr-x 1 root root 46984 Sep 22 2020 rmdir -rwxr-xr-x 1 root root 22292 Sep 27 2020 run-parts -rwxr-xr-x 1 root root 125036 Dec 22 2018 sed lrwxrwxrwx 1 root root 4 May 17 21:25 sh -> dash -rwxr-xr-x 1 root root 34696 Sep 22 2020 sleep -rwxr-xr-x 1 root root 83880 Sep 22 2020 stty -rwsr-xr-x 1 root root 79396 Feb 7 02:38 su -rwxr-xr-x 1 root root 34696 Sep 22 2020 sync -rwxr-xr-x 1 root root 602584 Feb 16 21:55 tar -rwxr-xr-x 1 root root 13860 Sep 27 2020 tempfile -rwxr-xr-x 1 root root 108520 Sep 22 2020 touch -rwxr-xr-x 1 root root 34664 Sep 22 2020 true -rwxr-xr-x 1 root root 17768 Feb 26 04:12 ulockmgr_server -rwsr-xr-x 1 root root 30236 Feb 7 02:38 umount -rwxr-xr-x 1 root root 34664 Sep 22 2020 uname -rwxr-xr-x 2 root root 2346 Mar 2 11:30 uncompress -rwxr-xr-x 1 root root 153964 Sep 22 2020 vdir -rwxr-xr-x 1 root root 63024 Feb 7 02:38 wdctl lrwxrwxrwx 1 root root 8 Nov 6 2019 ypdomainname -> hostname -rwxr-xr-x 1 root root 1984 Mar 2 11:30 zcat -rwxr-xr-x 1 root root 1678 Mar 2 11:30 zcmp -rwxr-xr-x 1 root root 5880 Mar 2 11:30 zdiff -rwxr-xr-x 1 root root 29 Mar 2 11:30 zegrep -rwxr-xr-x 1 root root 29 Mar 2 11:30 zfgrep -rwxr-xr-x 1 root root 2081 Mar 2 11:30 zforce -rwxr-xr-x 1 root root 7585 Mar 2 11:30 zgrep -rwxr-xr-x 1 root root 2206 Mar 2 11:30 zless -rwxr-xr-x 1 root root 1842 Mar 2 11:30 zmore -rwxr-xr-x 1 root root 4553 Mar 2 11:30 znew I: user script /srv/workspace/pbuilder/25125/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: i386 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-python, python3, python3-setuptools, python3-pkg-resources, python3-lxml, python3-ruamel.yaml, python3-ctdopts, help2man, 2to3 dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19674 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-python; however: Package dh-python is not installed. pbuilder-satisfydepends-dummy depends on python3; however: Package python3 is not installed. pbuilder-satisfydepends-dummy depends on python3-setuptools; however: Package python3-setuptools is not installed. pbuilder-satisfydepends-dummy depends on python3-pkg-resources; however: Package python3-pkg-resources is not installed. pbuilder-satisfydepends-dummy depends on python3-lxml; however: Package python3-lxml is not installed. pbuilder-satisfydepends-dummy depends on python3-ruamel.yaml; however: Package python3-ruamel.yaml is not installed. pbuilder-satisfydepends-dummy depends on python3-ctdopts; however: Package python3-ctdopts is not installed. pbuilder-satisfydepends-dummy depends on help2man; however: Package help2man is not installed. pbuilder-satisfydepends-dummy depends on 2to3; however: Package 2to3 is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: 2to3{a} autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} help2man{a} intltool-debian{a} libarchive-zip-perl{a} libdebhelper-perl{a} libelf1{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libicu67{a} liblocale-gettext-perl{a} libmagic-mgc{a} libmagic1{a} libmpdec3{a} libpipeline1{a} libpython3-stdlib{a} libpython3.9-minimal{a} libpython3.9-stdlib{a} libreadline8{a} libsigsegv2{a} libsub-override-perl{a} libtool{a} libuchardet0{a} libxml2{a} libxslt1.1{a} m4{a} man-db{a} media-types{a} po-debconf{a} python3{a} python3-ctdopts{a} python3-distutils{a} python3-lib2to3{a} python3-lxml{a} python3-minimal{a} python3-pkg-resources{a} python3-ruamel.yaml{a} python3-ruamel.yaml.clib{a} python3-setuptools{a} python3-tz{a} python3.9{a} python3.9-minimal{a} readline-common{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx python3-bs4 python3-html5lib wget 0 packages upgraded, 57 newly installed, 0 to remove and 0 not upgraded. Need to get 26.9 MB of archives. After unpacking 99.4 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian bullseye/main i386 bsdextrautils i386 2.36.1-7 [148 kB] Get: 2 http://deb.debian.org/debian bullseye/main i386 libuchardet0 i386 0.0.7-1 [67.9 kB] Get: 3 http://deb.debian.org/debian bullseye/main i386 groff-base i386 1.22.4-6 [952 kB] Get: 4 http://deb.debian.org/debian bullseye/main i386 libpipeline1 i386 1.5.3-1 [36.8 kB] Get: 5 http://deb.debian.org/debian bullseye/main i386 man-db i386 2.9.4-2 [1367 kB] Get: 6 http://deb.debian.org/debian bullseye/main i386 liblocale-gettext-perl i386 1.07-4+b1 [19.4 kB] Get: 7 http://deb.debian.org/debian bullseye/main i386 libpython3.9-minimal i386 3.9.2-1 [801 kB] Get: 8 http://deb.debian.org/debian bullseye/main i386 libexpat1 i386 2.2.10-2 [98.8 kB] Get: 9 http://deb.debian.org/debian bullseye/main i386 python3.9-minimal i386 3.9.2-1 [1956 kB] Get: 10 http://deb.debian.org/debian bullseye/main i386 python3-minimal i386 3.9.2-3 [38.2 kB] Get: 11 http://deb.debian.org/debian bullseye/main i386 media-types all 4.0.0 [30.3 kB] Get: 12 http://deb.debian.org/debian bullseye/main i386 libmpdec3 i386 2.5.1-1 [91.9 kB] Get: 13 http://deb.debian.org/debian bullseye/main i386 readline-common all 8.1-1 [73.7 kB] Get: 14 http://deb.debian.org/debian bullseye/main i386 libreadline8 i386 8.1-1 [173 kB] Get: 15 http://deb.debian.org/debian bullseye/main i386 libpython3.9-stdlib i386 3.9.2-1 [1703 kB] Get: 16 http://deb.debian.org/debian bullseye/main i386 python3.9 i386 3.9.2-1 [466 kB] Get: 17 http://deb.debian.org/debian bullseye/main i386 libpython3-stdlib i386 3.9.2-3 [21.4 kB] Get: 18 http://deb.debian.org/debian bullseye/main i386 python3 i386 3.9.2-3 [37.9 kB] Get: 19 http://deb.debian.org/debian bullseye/main i386 sensible-utils all 0.0.14 [14.8 kB] Get: 20 http://deb.debian.org/debian bullseye/main i386 libmagic-mgc i386 1:5.39-3 [273 kB] Get: 21 http://deb.debian.org/debian bullseye/main i386 libmagic1 i386 1:5.39-3 [133 kB] Get: 22 http://deb.debian.org/debian bullseye/main i386 file i386 1:5.39-3 [69.0 kB] Get: 23 http://deb.debian.org/debian bullseye/main i386 gettext-base i386 0.21-4 [176 kB] Get: 24 http://deb.debian.org/debian bullseye/main i386 python3-lib2to3 all 3.9.2-1 [77.8 kB] Get: 25 http://deb.debian.org/debian bullseye/main i386 2to3 all 3.9.2-3 [22.4 kB] Get: 26 http://deb.debian.org/debian bullseye/main i386 libsigsegv2 i386 2.13-1 [35.1 kB] Get: 27 http://deb.debian.org/debian bullseye/main i386 m4 i386 1.4.18-5 [206 kB] Get: 28 http://deb.debian.org/debian bullseye/main i386 autoconf all 2.69-14 [313 kB] Get: 29 http://deb.debian.org/debian bullseye/main i386 autotools-dev all 20180224.1+nmu1 [77.1 kB] Get: 30 http://deb.debian.org/debian bullseye/main i386 automake all 1:1.16.3-2 [814 kB] Get: 31 http://deb.debian.org/debian bullseye/main i386 autopoint all 0.21-4 [510 kB] Get: 32 http://deb.debian.org/debian bullseye/main i386 libdebhelper-perl all 13.3.4 [189 kB] Get: 33 http://deb.debian.org/debian bullseye/main i386 libtool all 2.4.6-15 [513 kB] Get: 34 http://deb.debian.org/debian bullseye/main i386 dh-autoreconf all 20 [17.1 kB] Get: 35 http://deb.debian.org/debian bullseye/main i386 libarchive-zip-perl all 1.68-1 [104 kB] Get: 36 http://deb.debian.org/debian bullseye/main i386 libsub-override-perl all 0.09-2 [10.2 kB] Get: 37 http://deb.debian.org/debian bullseye/main i386 libfile-stripnondeterminism-perl all 1.11.0-1 [25.6 kB] Get: 38 http://deb.debian.org/debian bullseye/main i386 dh-strip-nondeterminism all 1.11.0-1 [15.3 kB] Get: 39 http://deb.debian.org/debian bullseye/main i386 libelf1 i386 0.183-1 [171 kB] Get: 40 http://deb.debian.org/debian bullseye/main i386 dwz i386 0.13+20210201-1 [179 kB] Get: 41 http://deb.debian.org/debian bullseye/main i386 libicu67 i386 67.1-6 [8776 kB] Get: 42 http://deb.debian.org/debian bullseye/main i386 libxml2 i386 2.9.10+dfsg-6.6 [727 kB] Get: 43 http://deb.debian.org/debian bullseye/main i386 gettext i386 0.21-4 [1322 kB] Get: 44 http://deb.debian.org/debian bullseye/main i386 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get: 45 http://deb.debian.org/debian bullseye/main i386 po-debconf all 1.0.21+nmu1 [248 kB] Get: 46 http://deb.debian.org/debian bullseye/main i386 debhelper all 13.3.4 [1049 kB] Get: 47 http://deb.debian.org/debian bullseye/main i386 python3-distutils all 3.9.2-1 [143 kB] Get: 48 http://deb.debian.org/debian bullseye/main i386 dh-python all 4.20201102+nmu1 [99.4 kB] Get: 49 http://deb.debian.org/debian bullseye/main i386 help2man i386 1.48.1 [190 kB] Get: 50 http://deb.debian.org/debian bullseye/main i386 libxslt1.1 i386 1.1.34-4 [251 kB] Get: 51 http://deb.debian.org/debian bullseye/main i386 python3-tz all 2021.1-1 [34.8 kB] Get: 52 http://deb.debian.org/debian bullseye/main i386 python3-ctdopts all 1.4-2 [22.5 kB] Get: 53 http://deb.debian.org/debian bullseye/main i386 python3-lxml i386 4.6.3-1 [1080 kB] Get: 54 http://deb.debian.org/debian bullseye/main i386 python3-pkg-resources all 52.0.0-3 [189 kB] Get: 55 http://deb.debian.org/debian bullseye/main i386 python3-ruamel.yaml.clib i386 0.2.2-1+b2 [122 kB] Get: 56 http://deb.debian.org/debian bullseye/main i386 python3-ruamel.yaml all 0.16.12-2 [110 kB] Get: 57 http://deb.debian.org/debian bullseye/main i386 python3-setuptools all 52.0.0-3 [441 kB] Fetched 26.9 MB in 1min 4s (417 kB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package bsdextrautils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19674 files and directories currently installed.) Preparing to unpack .../0-bsdextrautils_2.36.1-7_i386.deb ... Unpacking bsdextrautils (2.36.1-7) ... Selecting previously unselected package libuchardet0:i386. Preparing to unpack .../1-libuchardet0_0.0.7-1_i386.deb ... Unpacking libuchardet0:i386 (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../2-groff-base_1.22.4-6_i386.deb ... 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Setting up libelf1:i386 (0.183-1) ... Setting up readline-common (8.1-1) ... Setting up libxml2:i386 (2.9.10+dfsg-6.6) ... Setting up liblocale-gettext-perl (1.07-4+b1) ... Setting up libfile-stripnondeterminism-perl (1.11.0-1) ... Setting up gettext (0.21-4) ... Setting up libtool (2.4.6-15) ... Setting up libreadline8:i386 (8.1-1) ... Setting up m4 (1.4.18-5) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up help2man (1.48.1) ... Setting up autoconf (2.69-14) ... Setting up dh-strip-nondeterminism (1.11.0-1) ... Setting up dwz (0.13+20210201-1) ... Setting up groff-base (1.22.4-6) ... Setting up libxslt1.1:i386 (1.1.34-4) ... Setting up libpython3.9-stdlib:i386 (3.9.2-1) ... Setting up libpython3-stdlib:i386 (3.9.2-3) ... Setting up automake (1:1.16.3-2) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.9.4-2) ... Not building database; man-db/auto-update is not 'true'. Setting up dh-autoreconf (20) ... Setting up python3.9 (3.9.2-1) ... Setting up debhelper (13.3.4) ... Setting up python3 (3.9.2-3) ... Setting up python3-tz (2021.1-1) ... Setting up python3-lxml:i386 (4.6.3-1) ... Setting up python3-lib2to3 (3.9.2-1) ... Setting up python3-pkg-resources (52.0.0-3) ... Setting up python3-distutils (3.9.2-1) ... Setting up dh-python (4.20201102+nmu1) ... Setting up python3-setuptools (52.0.0-3) ... Setting up python3-ctdopts (1.4-2) ... Setting up python3-ruamel.yaml.clib:i386 (0.2.2-1+b2) ... Setting up 2to3 (3.9.2-3) ... Setting up python3-ruamel.yaml (0.16.12-2) ... Processing triggers for libc-bin (2.31-11) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/ctdconverter-2.1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b dpkg-buildpackage: info: source package ctdconverter dpkg-buildpackage: info: source version 2.1-3 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 debian/rules clean dh clean --with python3 --buildsystem=pybuild dh_auto_clean -O--buildsystem=pybuild I: pybuild base:232: python3.9 setup.py clean running clean removing '/build/ctdconverter-2.1/.pybuild/cpython3_3.9_ctdconverter/build' (and everything under it) 'build/bdist.linux-i386' does not exist -- can't clean it 'build/scripts-3.9' does not exist -- can't clean it dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild debian/rules binary dh binary --with python3 --buildsystem=pybuild dh_update_autotools_config -O--buildsystem=pybuild dh_autoreconf -O--buildsystem=pybuild dh_auto_configure -O--buildsystem=pybuild I: pybuild base:232: python3.9 setup.py config running config debian/rules override_dh_auto_build make[1]: Entering directory '/build/ctdconverter-2.1' 2to3 --write --nobackups --no-diffs convert.py galaxy/ cwl/ common/ RefactoringTool: Skipping optional fixer: buffer RefactoringTool: Skipping optional fixer: idioms RefactoringTool: Skipping optional fixer: set_literal RefactoringTool: Skipping optional fixer: ws_comma RefactoringTool: Refactored convert.py RefactoringTool: Refactored galaxy/converter.py RefactoringTool: No changes to cwl/converter.py RefactoringTool: No changes to common/exceptions.py RefactoringTool: No changes to common/logger.py RefactoringTool: Refactored common/utils.py RefactoringTool: Files that were modified: RefactoringTool: convert.py RefactoringTool: galaxy/converter.py RefactoringTool: cwl/converter.py RefactoringTool: common/exceptions.py RefactoringTool: common/logger.py RefactoringTool: common/utils.py dh_auto_build I: pybuild base:232: /usr/bin/python3 setup.py build running build running build_py copying convert.py -> /build/ctdconverter-2.1/.pybuild/cpython3_3.9_ctdconverter/build creating /build/ctdconverter-2.1/.pybuild/cpython3_3.9_ctdconverter/build/galaxy copying galaxy/converter.py -> /build/ctdconverter-2.1/.pybuild/cpython3_3.9_ctdconverter/build/galaxy copying galaxy/__init__.py -> /build/ctdconverter-2.1/.pybuild/cpython3_3.9_ctdconverter/build/galaxy creating /build/ctdconverter-2.1/.pybuild/cpython3_3.9_ctdconverter/build/cwl copying cwl/converter.py -> /build/ctdconverter-2.1/.pybuild/cpython3_3.9_ctdconverter/build/cwl copying cwl/__init__.py -> /build/ctdconverter-2.1/.pybuild/cpython3_3.9_ctdconverter/build/cwl creating /build/ctdconverter-2.1/.pybuild/cpython3_3.9_ctdconverter/build/common copying common/exceptions.py -> /build/ctdconverter-2.1/.pybuild/cpython3_3.9_ctdconverter/build/common copying common/logger.py -> /build/ctdconverter-2.1/.pybuild/cpython3_3.9_ctdconverter/build/common copying common/__init__.py -> /build/ctdconverter-2.1/.pybuild/cpython3_3.9_ctdconverter/build/common copying common/utils.py -> /build/ctdconverter-2.1/.pybuild/cpython3_3.9_ctdconverter/build/common make[1]: Leaving directory '/build/ctdconverter-2.1' dh_auto_test -O--buildsystem=pybuild I: pybuild base:232: cd /build/ctdconverter-2.1/.pybuild/cpython3_3.9_ctdconverter/build; python3.9 -m unittest discover -v ---------------------------------------------------------------------- Ran 0 tests in 0.000s OK create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=pybuild dh_prep -O--buildsystem=pybuild dh_auto_install -O--buildsystem=pybuild I: pybuild base:232: /usr/bin/python3 setup.py install --root /build/ctdconverter-2.1/debian/ctdconverter running install running build running build_py running install_lib creating /build/ctdconverter-2.1/debian/ctdconverter/usr creating /build/ctdconverter-2.1/debian/ctdconverter/usr/lib creating /build/ctdconverter-2.1/debian/ctdconverter/usr/lib/python3.9 creating /build/ctdconverter-2.1/debian/ctdconverter/usr/lib/python3.9/dist-packages creating /build/ctdconverter-2.1/debian/ctdconverter/usr/lib/python3.9/dist-packages/galaxy creating /build/ctdconverter-2.1/debian/ctdconverter/usr/lib/python3.9/dist-packages/galaxy/__pycache__ copying /build/ctdconverter-2.1/.pybuild/cpython3_3.9_ctdconverter/build/galaxy/__pycache__/__init__.cpython-39.pyc -> /build/ctdconverter-2.1/debian/ctdconverter/usr/lib/python3.9/dist-packages/galaxy/__pycache__ copying /build/ctdconverter-2.1/.pybuild/cpython3_3.9_ctdconverter/build/galaxy/converter.py -> /build/ctdconverter-2.1/debian/ctdconverter/usr/lib/python3.9/dist-packages/galaxy copying /build/ctdconverter-2.1/.pybuild/cpython3_3.9_ctdconverter/build/galaxy/__init__.py -> /build/ctdconverter-2.1/debian/ctdconverter/usr/lib/python3.9/dist-packages/galaxy creating /build/ctdconverter-2.1/debian/ctdconverter/usr/lib/python3.9/dist-packages/cwl creating /build/ctdconverter-2.1/debian/ctdconverter/usr/lib/python3.9/dist-packages/cwl/__pycache__ copying /build/ctdconverter-2.1/.pybuild/cpython3_3.9_ctdconverter/build/cwl/__pycache__/__init__.cpython-39.pyc -> /build/ctdconverter-2.1/debian/ctdconverter/usr/lib/python3.9/dist-packages/cwl/__pycache__ copying /build/ctdconverter-2.1/.pybuild/cpython3_3.9_ctdconverter/build/cwl/converter.py -> /build/ctdconverter-2.1/debian/ctdconverter/usr/lib/python3.9/dist-packages/cwl copying /build/ctdconverter-2.1/.pybuild/cpython3_3.9_ctdconverter/build/cwl/__init__.py -> /build/ctdconverter-2.1/debian/ctdconverter/usr/lib/python3.9/dist-packages/cwl copying /build/ctdconverter-2.1/.pybuild/cpython3_3.9_ctdconverter/build/convert.py -> /build/ctdconverter-2.1/debian/ctdconverter/usr/lib/python3.9/dist-packages creating /build/ctdconverter-2.1/debian/ctdconverter/usr/lib/python3.9/dist-packages/common copying /build/ctdconverter-2.1/.pybuild/cpython3_3.9_ctdconverter/build/common/exceptions.py -> /build/ctdconverter-2.1/debian/ctdconverter/usr/lib/python3.9/dist-packages/common creating /build/ctdconverter-2.1/debian/ctdconverter/usr/lib/python3.9/dist-packages/common/__pycache__ copying /build/ctdconverter-2.1/.pybuild/cpython3_3.9_ctdconverter/build/common/__pycache__/__init__.cpython-39.pyc -> /build/ctdconverter-2.1/debian/ctdconverter/usr/lib/python3.9/dist-packages/common/__pycache__ copying /build/ctdconverter-2.1/.pybuild/cpython3_3.9_ctdconverter/build/common/logger.py -> /build/ctdconverter-2.1/debian/ctdconverter/usr/lib/python3.9/dist-packages/common copying /build/ctdconverter-2.1/.pybuild/cpython3_3.9_ctdconverter/build/common/__init__.py -> /build/ctdconverter-2.1/debian/ctdconverter/usr/lib/python3.9/dist-packages/common copying /build/ctdconverter-2.1/.pybuild/cpython3_3.9_ctdconverter/build/common/utils.py -> /build/ctdconverter-2.1/debian/ctdconverter/usr/lib/python3.9/dist-packages/common byte-compiling /build/ctdconverter-2.1/debian/ctdconverter/usr/lib/python3.9/dist-packages/galaxy/converter.py to converter.cpython-39.pyc /usr/lib/python3.9/dist-packages/galaxy/converter.py:397: SyntaxWarning: "is" with a literal. Did you mean "=="? byte-compiling /build/ctdconverter-2.1/debian/ctdconverter/usr/lib/python3.9/dist-packages/galaxy/__init__.py to __init__.cpython-39.pyc byte-compiling /build/ctdconverter-2.1/debian/ctdconverter/usr/lib/python3.9/dist-packages/cwl/converter.py to converter.cpython-39.pyc byte-compiling /build/ctdconverter-2.1/debian/ctdconverter/usr/lib/python3.9/dist-packages/cwl/__init__.py to __init__.cpython-39.pyc byte-compiling /build/ctdconverter-2.1/debian/ctdconverter/usr/lib/python3.9/dist-packages/convert.py to convert.cpython-39.pyc byte-compiling /build/ctdconverter-2.1/debian/ctdconverter/usr/lib/python3.9/dist-packages/common/exceptions.py to exceptions.cpython-39.pyc byte-compiling /build/ctdconverter-2.1/debian/ctdconverter/usr/lib/python3.9/dist-packages/common/logger.py to logger.cpython-39.pyc byte-compiling /build/ctdconverter-2.1/debian/ctdconverter/usr/lib/python3.9/dist-packages/common/__init__.py to __init__.cpython-39.pyc byte-compiling /build/ctdconverter-2.1/debian/ctdconverter/usr/lib/python3.9/dist-packages/common/utils.py to utils.cpython-39.pyc running install_egg_info running egg_info creating ctdconverter.egg-info writing ctdconverter.egg-info/PKG-INFO writing dependency_links to ctdconverter.egg-info/dependency_links.txt writing entry points to ctdconverter.egg-info/entry_points.txt writing requirements to ctdconverter.egg-info/requires.txt writing top-level names to ctdconverter.egg-info/top_level.txt writing manifest file 'ctdconverter.egg-info/SOURCES.txt' reading manifest file 'ctdconverter.egg-info/SOURCES.txt' writing manifest file 'ctdconverter.egg-info/SOURCES.txt' Copying ctdconverter.egg-info to /build/ctdconverter-2.1/debian/ctdconverter/usr/lib/python3.9/dist-packages/ctdconverter-2.0.egg-info Skipping SOURCES.txt running install_scripts Installing CTDConverter script to /build/ctdconverter-2.1/debian/ctdconverter/usr/bin dh_installdocs -O--buildsystem=pybuild dh_installchangelogs -O--buildsystem=pybuild debian/rules override_dh_installman make[1]: Entering directory '/build/ctdconverter-2.1' help2man 'python3 convert.py' --include=debian/CTDConverter.help2man \ --no-info --version-string="2.1" \ --output=debian/CTDConverter.1 dh_installman make[1]: Leaving directory '/build/ctdconverter-2.1' dh_python3 -O--buildsystem=pybuild dh_installsystemduser -O--buildsystem=pybuild dh_perl -O--buildsystem=pybuild dh_link -O--buildsystem=pybuild dh_strip_nondeterminism -O--buildsystem=pybuild dh_compress -O--buildsystem=pybuild dh_fixperms -O--buildsystem=pybuild dh_missing -O--buildsystem=pybuild dh_installdeb -O--buildsystem=pybuild dh_gencontrol -O--buildsystem=pybuild dh_md5sums -O--buildsystem=pybuild dh_builddeb -O--buildsystem=pybuild dpkg-deb: building package 'ctdconverter' in '../ctdconverter_2.1-3_all.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../ctdconverter_2.1-3_i386.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/25125 and its subdirectories I: Current time: Wed May 19 15:35:25 -12 2021 I: pbuilder-time-stamp: 1621481725 Thu May 20 03:35:26 UTC 2021 I: 1st build successful. Starting 2nd build on remote node ionos16-i386.debian.net. Thu May 20 03:35:26 UTC 2021 I: Preparing to do remote build '2' on ionos16-i386.debian.net. Thu May 20 03:35:53 UTC 2021 I: Deleting $TMPDIR on ionos16-i386.debian.net. Thu May 20 03:35:54 UTC 2021 I: ctdconverter_2.1-3_i386.changes: Format: 1.8 Date: Thu, 01 Oct 2020 11:29:40 +0200 Source: ctdconverter Binary: ctdconverter Architecture: all Version: 2.1-3 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: ctdconverter - Convert CTD files into Galaxy tool and CWL CommandLineTool files Closes: 971459 Changes: ctdconverter (2.1-3) unstable; urgency=medium . * Team upload. * Restrictions: superficial Closes: #971459 * debhelper-compat 13 (routine-update) Checksums-Sha1: 31692c8bd471430695d7742365223165d0c57eac 27784 ctdconverter_2.1-3_all.deb 029e6953f50e696d4ce4122c57fc4f133b8d06b7 5434 ctdconverter_2.1-3_i386.buildinfo Checksums-Sha256: 417fdc8a2cc7715e4e9f8811dcfa0739049d5df4ab462d90e75baf7a4d7bce5b 27784 ctdconverter_2.1-3_all.deb 065464749d75b20f6a90014bfa2e91676a10e6c8dae01335ad70566f36a9537d 5434 ctdconverter_2.1-3_i386.buildinfo Files: b920ce133ad50574d77ec2f75e337225 27784 science optional ctdconverter_2.1-3_all.deb d113e172500195d1822e1c7cbf4e13a1 5434 science optional ctdconverter_2.1-3_i386.buildinfo Thu May 20 03:35:57 UTC 2021 I: diffoscope 172 will be used to compare the two builds: # Profiling output for: /usr/bin/diffoscope --html /srv/reproducible-results/rbuild-debian/tmp.OEog5ITAvl/ctdconverter_2.1-3.diffoscope.html --text /srv/reproducible-results/rbuild-debian/tmp.OEog5ITAvl/ctdconverter_2.1-3.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/tmp.OEog5ITAvl/ctdconverter_2.1-3.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/tmp.OEog5ITAvl/b1/ctdconverter_2.1-3_i386.changes /srv/reproducible-results/rbuild-debian/tmp.OEog5ITAvl/b2/ctdconverter_2.1-3_i386.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 1.694s) 1.694s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.024s) 0.024s 10 calls diffoscope.comparators.binary.FilesystemFile 0.000s 8 calls abc.DotChangesFile Thu May 20 03:41:17 UTC 2021 I: diffoscope 172 found no differences in the changes files, and a .buildinfo file also exists. Thu May 20 03:41:17 UTC 2021 I: ctdconverter from bullseye built successfully and reproducibly on i386. Thu May 20 03:41:21 UTC 2021 I: Submitting .buildinfo files to external archives: Thu May 20 03:41:21 UTC 2021 I: Submitting 8.0K b1/ctdconverter_2.1-3_i386.buildinfo.asc Thu May 20 03:41:22 UTC 2021 I: Submitting 8.0K b2/ctdconverter_2.1-3_i386.buildinfo.asc Thu May 20 03:41:24 UTC 2021 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Thu May 20 03:41:24 UTC 2021 I: Done submitting .buildinfo files. Thu May 20 03:41:24 UTC 2021 I: Removing signed ctdconverter_2.1-3_i386.buildinfo.asc files: removed './b1/ctdconverter_2.1-3_i386.buildinfo.asc' removed './b2/ctdconverter_2.1-3_i386.buildinfo.asc'