Sat Jul 24 23:09:38 UTC 2021 I: starting to build cmtk/bullseye/i386 on jenkins on '2021-07-24 23:09' Sat Jul 24 23:09:38 UTC 2021 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/i386_8/19515/console.log Sat Jul 24 23:09:38 UTC 2021 I: Downloading source for bullseye/cmtk=3.3.1p1+dfsg-2 --2021-07-24 23:09:39-- http://cdn-fastly.deb.debian.org/debian/pool/main/c/cmtk/cmtk_3.3.1p1+dfsg-2.dsc Connecting to 78.137.99.97:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2255 (2.2K) Saving to: ‘cmtk_3.3.1p1+dfsg-2.dsc’ 0K .. 100% 168M=0s 2021-07-24 23:09:39 (168 MB/s) - ‘cmtk_3.3.1p1+dfsg-2.dsc’ saved [2255/2255] Sat Jul 24 23:09:39 UTC 2021 I: cmtk_3.3.1p1+dfsg-2.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: cmtk Binary: cmtk Architecture: any Version: 3.3.1p1+dfsg-2 Maintainer: NeuroDebian Team Uploaders: Yaroslav Halchenko , Michael Hanke Homepage: http://www.nitrc.org/projects/cmtk/ Standards-Version: 4.4.1 Vcs-Browser: https://salsa.debian.org/neurodebian-team/cmtk Vcs-Git: https://salsa.debian.org/neurodebian-team/cmtk.git Build-Depends: debhelper-compat (= 12), cmake, libmxml-dev, libsqlite3-dev, zlib1g-dev | libz-dev, libdcmtk-dev | libdcmtk2-dev | libdcmtk1-dev, libbz2-dev, libfftw3-dev, liblzma-dev, libpng-dev, libtiff-dev | libtiff4-dev, libwrap0-dev, libcharls-dev | libdcmtk1-dev, libxml2-dev, libssl-dev, xvfb, bc, dc, xauth Package-List: cmtk deb science optional arch=any Checksums-Sha1: ae661d5c6a5c31f82880c86ac7b4a7c2af7362bd 1054988 cmtk_3.3.1p1+dfsg.orig.tar.xz e2f8566a10004d0367fc4069e1c4283ebd831ef2 9788 cmtk_3.3.1p1+dfsg-2.debian.tar.xz Checksums-Sha256: 7ca8cea1659b43bf5b1f5e167653e6535df536125c2f79047c1c874c6d07091c 1054988 cmtk_3.3.1p1+dfsg.orig.tar.xz 8c480907cbb7fad38a1aaae11d6e8649f43774fbb5a1a519eb3aa8e3fe11e77a 9788 cmtk_3.3.1p1+dfsg-2.debian.tar.xz Files: 92327e1782775179215133795a74fffe 1054988 cmtk_3.3.1p1+dfsg.orig.tar.xz 80856485dafd8d5b2320dbb5c9cab199 9788 cmtk_3.3.1p1+dfsg-2.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAl3JUVERHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtFVDQ//SbfajdrGUdW8x5l0+pKSijh/bCUxpI/9 FMV8SUyPE8cFCbuwZNeTJEJn+nTknhazl7WfcznLRW/3JXLHGLPXeut5sPYCb9rG joHQ3iA3UfVyMOVpZs+m5UgP37gltHR+f0TibJt9MrmB55cRadq1fUNQ4su3/Fl/ 6Npx+LI9CULvbsHczA2eA1M3svP8AlP1Jnudgw5h7mUmPGP24RPXzjm9oVsClGlE J8toI31TOftPqijZXNQBDeH2hhX20Eu7OeDkxA+7gZVh4D0ibGm3DS+mRlrWK1IB vY8xCMAaL8Trk4x2FbOtP1DyWgXO5Hu4bAmMg4mljXSlaJergjV7Tinc/OQkJavq eh3R5GvDVBEYJtI8mkWRGfty0eTHaGWI1FAF/Wwvo1J3rMLLBUwMxfkBp/uvnV1d 15uU5/024h1wKnQY4U/A246tW/sHJ8zxkFEWWIN8OAQRBh6MQNxRzTxmnEMCr56N H6Xs68H+bWET24UesNFhUasyKvBqS7MinrhIXk6zVmgMXGspch9xpAv4C9OFjNBf FgeXgMpaqKOaRYx5Skrx+bfw7/XlXnhBw4EvH+w78Eh2+zJC/P5r2E+JYxuuXzMC rfzAsj6eIEYgJsafD+KIwyR1LYlHPlR6xx1RSM4wjIQAocrt5xoRzWDqANWX/ITC 9yt9aER3Q08= =mF23 -----END PGP SIGNATURE----- Sat Jul 24 23:09:39 UTC 2021 I: Checking whether the package is not for us Sat Jul 24 23:09:39 UTC 2021 I: Starting 1st build on remote node ionos16-i386.debian.net. Sat Jul 24 23:09:39 UTC 2021 I: Preparing to do remote build '1' on ionos16-i386.debian.net. Sat Jul 24 23:12:47 UTC 2021 I: Deleting $TMPDIR on ionos16-i386.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Fri Aug 26 17:32:39 -12 2022 I: pbuilder-time-stamp: 1661578359 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bullseye-reproducible-base.tgz] I: copying local configuration I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: using eatmydata during job I: Copying source file I: copying [cmtk_3.3.1p1+dfsg-2.dsc] I: copying [./cmtk_3.3.1p1+dfsg.orig.tar.xz] I: copying [./cmtk_3.3.1p1+dfsg-2.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/tmp/dpkg-verify-sig.JavJ5vPe/trustedkeys.kbx': General error gpgv: Signature made Mon Nov 11 00:17:21 2019 -12 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./cmtk_3.3.1p1+dfsg-2.dsc dpkg-source: info: extracting cmtk in cmtk-3.3.1p1+dfsg dpkg-source: info: unpacking cmtk_3.3.1p1+dfsg.orig.tar.xz dpkg-source: info: unpacking cmtk_3.3.1p1+dfsg-2.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying up_assure_no_as_needed_for_checklibdep dpkg-source: info: applying reproducible_build dpkg-source: info: applying fix_cmake_version_comparison dpkg-source: info: applying dcmtk-3.6.1-compatibility I: using fakeroot in build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/28914/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='i386' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=16' DISTRIBUTION='' HOME='/root' HOST_ARCH='i386' IFS=' ' INVOCATION_ID='6681a35673e647ef9de14a8560bedf55' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' LD_LIBRARY_PATH='/usr/lib/libeatmydata' LD_PRELOAD='libeatmydata.so' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='28914' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.h5wwv4vIbH/pbuilderrc_znYH --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.h5wwv4vIbH/b1 --logfile b1/build.log cmtk_3.3.1p1+dfsg-2.dsc' SUDO_GID='112' SUDO_UID='107' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://85.184.249.68:3128' I: uname -a Linux ionos16-i386 4.19.0-17-amd64 #1 SMP Debian 4.19.194-3 (2021-07-18) x86_64 GNU/Linux I: ls -l /bin total 5776 -rwxr-xr-x 1 root root 1367848 Jun 21 2021 bash -rwxr-xr-x 3 root root 38280 Jul 20 2020 bunzip2 -rwxr-xr-x 3 root root 38280 Jul 20 2020 bzcat lrwxrwxrwx 1 root root 6 Jul 20 2020 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2225 Jul 20 2020 bzdiff lrwxrwxrwx 1 root root 6 Jul 20 2020 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4877 Sep 4 2019 bzexe lrwxrwxrwx 1 root root 6 Jul 20 2020 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3775 Jul 20 2020 bzgrep -rwxr-xr-x 3 root root 38280 Jul 20 2020 bzip2 -rwxr-xr-x 1 root root 17768 Jul 20 2020 bzip2recover lrwxrwxrwx 1 root root 6 Jul 20 2020 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Jul 20 2020 bzmore -rwxr-xr-x 1 root root 38824 Sep 22 2020 cat -rwxr-xr-x 1 root root 71624 Sep 22 2020 chgrp -rwxr-xr-x 1 root root 67528 Sep 22 2020 chmod -rwxr-xr-x 1 root root 75752 Sep 22 2020 chown -rwxr-xr-x 1 root root 157960 Sep 22 2020 cp -rwxr-xr-x 1 root root 128724 Dec 10 2020 dash -rwxr-xr-x 1 root root 124904 Sep 22 2020 date -rwxr-xr-x 1 root root 92172 Sep 22 2020 dd -rwxr-xr-x 1 root root 100752 Sep 22 2020 df -rwxr-xr-x 1 root root 153964 Sep 22 2020 dir -rwxr-xr-x 1 root root 83644 Feb 7 2021 dmesg lrwxrwxrwx 1 root root 8 Nov 6 2019 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Nov 6 2019 domainname -> hostname -rwxr-xr-x 1 root root 34664 Sep 22 2020 echo -rwxr-xr-x 1 root root 28 Nov 9 2020 egrep -rwxr-xr-x 1 root root 34664 Sep 22 2020 false -rwxr-xr-x 1 root root 28 Nov 9 2020 fgrep -rwxr-xr-x 1 root root 71928 Feb 7 2021 findmnt -rwsr-xr-x 1 root root 30112 Feb 26 2021 fusermount -rwxr-xr-x 1 root root 210488 Nov 9 2020 grep -rwxr-xr-x 2 root root 2346 Mar 2 2021 gunzip -rwxr-xr-x 1 root root 6376 Mar 2 2021 gzexe -rwxr-xr-x 1 root root 100952 Mar 2 2021 gzip -rwxr-xr-x 1 root root 21916 Nov 6 2019 hostname -rwxr-xr-x 1 root root 83980 Sep 22 2020 ln -rwxr-xr-x 1 root root 55572 Feb 7 2020 login -rwxr-xr-x 1 root root 153964 Sep 22 2020 ls -rwxr-xr-x 1 root root 153124 Feb 7 2021 lsblk -rwxr-xr-x 1 root root 96328 Sep 22 2020 mkdir -rwxr-xr-x 1 root root 79912 Sep 22 2020 mknod -rwxr-xr-x 1 root root 47048 Sep 22 2020 mktemp -rwxr-xr-x 1 root root 58920 Feb 7 2021 more -rwsr-xr-x 1 root root 50720 Feb 7 2021 mount -rwxr-xr-x 1 root root 13856 Feb 7 2021 mountpoint -rwxr-xr-x 1 root root 157996 Sep 22 2020 mv lrwxrwxrwx 1 root root 8 Nov 6 2019 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Apr 18 2021 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 38824 Sep 22 2020 pwd lrwxrwxrwx 1 root root 4 Jun 21 2021 rbash -> bash -rwxr-xr-x 1 root root 46984 Sep 22 2020 readlink -rwxr-xr-x 1 root root 75720 Sep 22 2020 rm -rwxr-xr-x 1 root root 46984 Sep 22 2020 rmdir -rwxr-xr-x 1 root root 22292 Sep 27 2020 run-parts -rwxr-xr-x 1 root root 125036 Dec 22 2018 sed lrwxrwxrwx 1 root root 4 Aug 26 03:46 sh -> dash -rwxr-xr-x 1 root root 34696 Sep 22 2020 sleep -rwxr-xr-x 1 root root 83880 Sep 22 2020 stty -rwsr-xr-x 1 root root 79396 Feb 7 2021 su -rwxr-xr-x 1 root root 34696 Sep 22 2020 sync -rwxr-xr-x 1 root root 602584 Feb 16 2021 tar -rwxr-xr-x 1 root root 13860 Sep 27 2020 tempfile -rwxr-xr-x 1 root root 108520 Sep 22 2020 touch -rwxr-xr-x 1 root root 34664 Sep 22 2020 true -rwxr-xr-x 1 root root 17768 Feb 26 2021 ulockmgr_server -rwsr-xr-x 1 root root 30236 Feb 7 2021 umount -rwxr-xr-x 1 root root 34664 Sep 22 2020 uname -rwxr-xr-x 2 root root 2346 Mar 2 2021 uncompress -rwxr-xr-x 1 root root 153964 Sep 22 2020 vdir -rwxr-xr-x 1 root root 63024 Feb 7 2021 wdctl lrwxrwxrwx 1 root root 8 Nov 6 2019 ypdomainname -> hostname -rwxr-xr-x 1 root root 1984 Mar 2 2021 zcat -rwxr-xr-x 1 root root 1678 Mar 2 2021 zcmp -rwxr-xr-x 1 root root 5880 Mar 2 2021 zdiff -rwxr-xr-x 1 root root 29 Mar 2 2021 zegrep -rwxr-xr-x 1 root root 29 Mar 2 2021 zfgrep -rwxr-xr-x 1 root root 2081 Mar 2 2021 zforce -rwxr-xr-x 1 root root 7585 Mar 2 2021 zgrep -rwxr-xr-x 1 root root 2206 Mar 2 2021 zless -rwxr-xr-x 1 root root 1842 Mar 2 2021 zmore -rwxr-xr-x 1 root root 4553 Mar 2 2021 znew I: user script /srv/workspace/pbuilder/28914/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: i386 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 12), cmake, libmxml-dev, libsqlite3-dev, zlib1g-dev | libz-dev, libdcmtk-dev | libdcmtk2-dev | libdcmtk1-dev, libbz2-dev, libfftw3-dev, liblzma-dev, libpng-dev, libtiff-dev | libtiff4-dev, libwrap0-dev, libcharls-dev | libdcmtk1-dev, libxml2-dev, libssl-dev, xvfb, bc, dc, xauth dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19675 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 12); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on cmake; however: Package cmake is not installed. pbuilder-satisfydepends-dummy depends on libmxml-dev; however: Package libmxml-dev is not installed. pbuilder-satisfydepends-dummy depends on libsqlite3-dev; however: Package libsqlite3-dev is not installed. pbuilder-satisfydepends-dummy depends on zlib1g-dev | libz-dev; however: Package zlib1g-dev is not installed. Package libz-dev is not installed. pbuilder-satisfydepends-dummy depends on libdcmtk-dev | libdcmtk2-dev | libdcmtk1-dev; however: Package libdcmtk-dev is not installed. Package libdcmtk2-dev is not installed. Package libdcmtk1-dev is not installed. pbuilder-satisfydepends-dummy depends on libbz2-dev; however: Package libbz2-dev is not installed. pbuilder-satisfydepends-dummy depends on libfftw3-dev; however: Package libfftw3-dev is not installed. pbuilder-satisfydepends-dummy depends on liblzma-dev; however: Package liblzma-dev is not installed. pbuilder-satisfydepends-dummy depends on libpng-dev; however: Package libpng-dev is not installed. pbuilder-satisfydepends-dummy depends on libtiff-dev | libtiff4-dev; however: Package libtiff-dev is not installed. Package libtiff4-dev is not installed. pbuilder-satisfydepends-dummy depends on libwrap0-dev; however: Package libwrap0-dev is not installed. pbuilder-satisfydepends-dummy depends on libcharls-dev | libdcmtk1-dev; however: Package libcharls-dev is not installed. Package libdcmtk1-dev is not installed. pbuilder-satisfydepends-dummy depends on libxml2-dev; however: Package libxml2-dev is not installed. pbuilder-satisfydepends-dummy depends on libssl-dev; however: Package libssl-dev is not installed. pbuilder-satisfydepends-dummy depends on xvfb; however: Package xvfb is not installed. pbuilder-satisfydepends-dummy depends on bc; however: Package bc is not installed. pbuilder-satisfydepends-dummy depends on dc; however: Package dc is not installed. pbuilder-satisfydepends-dummy depends on xauth; however: Package xauth is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bc{a} bsdextrautils{a} cmake{a} cmake-data{a} dc{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} icu-devtools{a} intltool-debian{a} libarchive-zip-perl{a} libarchive13{a} libbrotli1{a} libbsd0{a} libbz2-dev{a} libcharls-dev{a} libcharls2{a} libcurl4{a} libdcmtk-dev{a} libdcmtk15{a} libdebhelper-perl{a} libdeflate-dev{a} libdeflate0{a} libdrm-amdgpu1{a} libdrm-common{a} libdrm-intel1{a} libdrm-nouveau2{a} libdrm-radeon1{a} libdrm2{a} libedit2{a} libelf1{a} libexpat1{a} libfftw3-bin{a} libfftw3-dev{a} libfftw3-double3{a} libfftw3-long3{a} libfftw3-quad3{a} libfftw3-single3{a} libfile-stripnondeterminism-perl{a} libfontenc1{a} libfreetype6{a} libgl1{a} libgl1-mesa-dri{a} libglapi-mesa{a} libglvnd0{a} libglx-mesa0{a} libglx0{a} libice6{a} libicu-dev{a} libicu67{a} libjbig-dev{a} libjbig0{a} libjpeg-dev{a} libjpeg62-turbo{a} libjpeg62-turbo-dev{a} libjsoncpp24{a} libldap-2.4-2{a} libllvm11{a} liblzma-dev{a} libmagic-mgc{a} libmagic1{a} libmd0{a} libmxml-dev{a} libmxml1{a} libncurses6{a} libnghttp2-14{a} libpciaccess0{a} libpipeline1{a} libpixman-1-0{a} libpng-dev{a} libpng16-16{a} libprocps8{a} libpsl5{a} libreadline8{a} librhash0{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libsensors-config{a} libsensors5{a} libsigsegv2{a} libsm6{a} libsqlite3-dev{a} libssh2-1{a} libssl-dev{a} libsub-override-perl{a} libtiff-dev{a} libtiff5{a} libtiffxx5{a} libtool{a} libuchardet0{a} libunwind8{a} libuv1{a} libvulkan1{a} libwebp6{a} libwrap0{a} libwrap0-dev{a} libx11-6{a} libx11-data{a} libx11-xcb1{a} libxau6{a} libxaw7{a} libxcb-dri2-0{a} libxcb-dri3-0{a} libxcb-glx0{a} libxcb-present0{a} libxcb-shm0{a} libxcb-sync1{a} libxcb-xfixes0{a} libxcb1{a} libxdamage1{a} libxdmcp6{a} libxext6{a} libxfixes3{a} libxfont2{a} libxkbfile1{a} libxml2{a} libxml2-dev{a} libxmu6{a} libxmuu1{a} libxpm4{a} libxshmfence1{a} libxt6{a} libxxf86vm1{a} libz3-4{a} m4{a} man-db{a} po-debconf{a} procps{a} readline-common{a} sensible-utils{a} x11-common{a} x11-xkb-utils{a} xauth{a} xkb-data{a} xserver-common{a} xvfb{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: bzip2-doc ca-certificates curl libarchive-cpio-perl libgpm2 libldap-common libltdl-dev libmail-sendmail-perl libpng-tools libsasl2-modules lynx mesa-vulkan-drivers psmisc publicsuffix wget xfonts-base 0 packages upgraded, 147 newly installed, 0 to remove and 0 not upgraded. Need to get 108 MB of archives. After unpacking 416 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian bullseye/main i386 bsdextrautils i386 2.36.1-7 [148 kB] Get: 2 http://deb.debian.org/debian bullseye/main i386 libuchardet0 i386 0.0.7-1 [67.9 kB] Get: 3 http://deb.debian.org/debian bullseye/main i386 groff-base i386 1.22.4-6 [952 kB] Get: 4 http://deb.debian.org/debian bullseye/main i386 libpipeline1 i386 1.5.3-1 [36.8 kB] Get: 5 http://deb.debian.org/debian bullseye/main i386 man-db i386 2.9.4-2 [1367 kB] Get: 6 http://deb.debian.org/debian bullseye/main i386 libcharls2 i386 2.2.0+dfsg-2 [82.1 kB] Get: 7 http://deb.debian.org/debian bullseye/main i386 libcharls-dev i386 2.2.0+dfsg-2 [24.4 kB] Get: 8 http://deb.debian.org/debian bullseye/main i386 readline-common all 8.1-1 [73.7 kB] Get: 9 http://deb.debian.org/debian bullseye/main i386 libreadline8 i386 8.1-1 [173 kB] Get: 10 http://deb.debian.org/debian bullseye/main i386 libncurses6 i386 6.2+20201114-2 [110 kB] Get: 11 http://deb.debian.org/debian bullseye/main i386 libprocps8 i386 2:3.3.17-5 [64.2 kB] Get: 12 http://deb.debian.org/debian bullseye/main i386 procps i386 2:3.3.17-5 [501 kB] Get: 13 http://deb.debian.org/debian bullseye/main i386 sensible-utils all 0.0.14 [14.8 kB] Get: 14 http://deb.debian.org/debian bullseye/main i386 libmagic-mgc i386 1:5.39-3 [273 kB] Get: 15 http://deb.debian.org/debian bullseye/main i386 libmagic1 i386 1:5.39-3 [133 kB] Get: 16 http://deb.debian.org/debian bullseye/main i386 file i386 1:5.39-3 [69.0 kB] Get: 17 http://deb.debian.org/debian bullseye/main i386 gettext-base i386 0.21-4 [176 kB] Get: 18 http://deb.debian.org/debian bullseye/main i386 libsigsegv2 i386 2.13-1 [35.1 kB] Get: 19 http://deb.debian.org/debian bullseye/main i386 m4 i386 1.4.18-5 [206 kB] Get: 20 http://deb.debian.org/debian bullseye/main i386 autoconf all 2.69-14 [313 kB] Get: 21 http://deb.debian.org/debian bullseye/main i386 autotools-dev all 20180224.1+nmu1 [77.1 kB] Get: 22 http://deb.debian.org/debian bullseye/main i386 automake all 1:1.16.3-2 [814 kB] Get: 23 http://deb.debian.org/debian bullseye/main i386 autopoint all 0.21-4 [510 kB] Get: 24 http://deb.debian.org/debian bullseye/main i386 bc i386 1.07.1-2+b2 [111 kB] Get: 25 http://deb.debian.org/debian bullseye/main i386 cmake-data all 3.18.4-2 [1725 kB] Get: 26 http://deb.debian.org/debian bullseye/main i386 libicu67 i386 67.1-7 [8775 kB] Get: 27 http://deb.debian.org/debian bullseye/main i386 libxml2 i386 2.9.10+dfsg-6.7 [728 kB] Get: 28 http://deb.debian.org/debian bullseye/main i386 libarchive13 i386 3.4.3-2+b1 [384 kB] Get: 29 http://deb.debian.org/debian bullseye/main i386 libbrotli1 i386 1.0.9-2+b2 [286 kB] Get: 30 http://deb.debian.org/debian bullseye/main i386 libsasl2-modules-db i386 2.1.27+dfsg-2.1 [70.0 kB] Get: 31 http://deb.debian.org/debian bullseye/main i386 libsasl2-2 i386 2.1.27+dfsg-2.1 [110 kB] Get: 32 http://deb.debian.org/debian bullseye/main i386 libldap-2.4-2 i386 2.4.57+dfsg-3 [244 kB] Get: 33 http://deb.debian.org/debian bullseye/main i386 libnghttp2-14 i386 1.43.0-1 [85.7 kB] Get: 34 http://deb.debian.org/debian bullseye/main i386 libpsl5 i386 0.21.0-1.2 [57.9 kB] Get: 35 http://deb.debian.org/debian bullseye/main i386 librtmp1 i386 2.4+20151223.gitfa8646d.1-2+b2 [64.3 kB] Get: 36 http://deb.debian.org/debian bullseye/main i386 libssh2-1 i386 1.9.0-2 [164 kB] Get: 37 http://deb.debian.org/debian bullseye/main i386 libcurl4 i386 7.74.0-1.3+b1 [372 kB] Get: 38 http://deb.debian.org/debian bullseye/main i386 libexpat1 i386 2.2.10-2 [98.8 kB] Get: 39 http://deb.debian.org/debian bullseye/main i386 libjsoncpp24 i386 1.9.4-4 [86.1 kB] Get: 40 http://deb.debian.org/debian bullseye/main i386 librhash0 i386 1.4.1-2 [144 kB] Get: 41 http://deb.debian.org/debian bullseye/main i386 libuv1 i386 1.40.0-2 [139 kB] Get: 42 http://deb.debian.org/debian bullseye/main i386 cmake i386 3.18.4-2 [7029 kB] Get: 43 http://deb.debian.org/debian bullseye/main i386 dc i386 1.07.1-2+b2 [74.2 kB] Get: 44 http://deb.debian.org/debian bullseye/main i386 libdebhelper-perl all 13.3.4 [189 kB] Get: 45 http://deb.debian.org/debian bullseye/main i386 libtool all 2.4.6-15 [513 kB] Get: 46 http://deb.debian.org/debian bullseye/main i386 dh-autoreconf all 20 [17.1 kB] Get: 47 http://deb.debian.org/debian bullseye/main i386 libarchive-zip-perl all 1.68-1 [104 kB] Get: 48 http://deb.debian.org/debian bullseye/main i386 libsub-override-perl all 0.09-2 [10.2 kB] Get: 49 http://deb.debian.org/debian bullseye/main i386 libfile-stripnondeterminism-perl all 1.12.0-1 [26.3 kB] Get: 50 http://deb.debian.org/debian bullseye/main i386 dh-strip-nondeterminism all 1.12.0-1 [15.4 kB] Get: 51 http://deb.debian.org/debian bullseye/main i386 libelf1 i386 0.183-1 [171 kB] Get: 52 http://deb.debian.org/debian bullseye/main i386 dwz i386 0.13+20210201-1 [179 kB] Get: 53 http://deb.debian.org/debian bullseye/main i386 gettext i386 0.21-4 [1322 kB] Get: 54 http://deb.debian.org/debian bullseye/main i386 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get: 55 http://deb.debian.org/debian bullseye/main i386 po-debconf all 1.0.21+nmu1 [248 kB] Get: 56 http://deb.debian.org/debian bullseye/main i386 debhelper all 13.3.4 [1049 kB] Get: 57 http://deb.debian.org/debian bullseye/main i386 icu-devtools i386 67.1-7 [209 kB] Get: 58 http://deb.debian.org/debian bullseye/main i386 libmd0 i386 1.0.3-3 [28.9 kB] Get: 59 http://deb.debian.org/debian bullseye/main i386 libbsd0 i386 0.11.3-1 [111 kB] Get: 60 http://deb.debian.org/debian bullseye/main i386 libbz2-dev i386 1.0.8-4 [31.3 kB] Get: 61 http://deb.debian.org/debian bullseye/main i386 libicu-dev i386 67.1-7 [9801 kB] Get: 62 http://deb.debian.org/debian bullseye/main i386 libxml2-dev i386 2.9.10+dfsg-6.7 [851 kB] Get: 63 http://deb.debian.org/debian bullseye/main i386 libssl-dev i386 1.1.1k-1 [1841 kB] Get: 64 http://deb.debian.org/debian bullseye/main i386 libpng16-16 i386 1.6.37-3 [303 kB] Get: 65 http://deb.debian.org/debian bullseye/main i386 zlib1g-dev i386 1:1.2.11.dfsg-2 [194 kB] Get: 66 http://deb.debian.org/debian bullseye/main i386 libpng-dev i386 1.6.37-3 [307 kB] Get: 67 http://deb.debian.org/debian bullseye/main i386 libwrap0 i386 7.6.q-31 [60.0 kB] Get: 68 http://deb.debian.org/debian bullseye/main i386 libwrap0-dev i386 7.6.q-31 [23.4 kB] Get: 69 http://deb.debian.org/debian bullseye/main i386 libjbig0 i386 2.1-3.1+b2 [31.5 kB] Get: 70 http://deb.debian.org/debian bullseye/main i386 libjbig-dev i386 2.1-3.1+b2 [30.8 kB] Get: 71 http://deb.debian.org/debian bullseye/main i386 libjpeg62-turbo i386 1:2.0.6-4 [160 kB] Get: 72 http://deb.debian.org/debian bullseye/main i386 libjpeg62-turbo-dev i386 1:2.0.6-4 [299 kB] Get: 73 http://deb.debian.org/debian bullseye/main i386 libjpeg-dev i386 1:2.0.6-4 [67.8 kB] Get: 74 http://deb.debian.org/debian bullseye/main i386 liblzma-dev i386 5.2.5-2 [240 kB] Get: 75 http://deb.debian.org/debian bullseye/main i386 libdeflate0 i386 1.7-1 [48.4 kB] Get: 76 http://deb.debian.org/debian bullseye/main i386 libwebp6 i386 0.6.1-2.1 [269 kB] Get: 77 http://deb.debian.org/debian bullseye/main i386 libtiff5 i386 4.2.0-1 [305 kB] Get: 78 http://deb.debian.org/debian bullseye/main i386 libtiffxx5 i386 4.2.0-1 [129 kB] Get: 79 http://deb.debian.org/debian bullseye/main i386 libdeflate-dev i386 1.7-1 [44.4 kB] Get: 80 http://deb.debian.org/debian bullseye/main i386 libtiff-dev i386 4.2.0-1 [438 kB] Get: 81 http://deb.debian.org/debian bullseye/main i386 libdcmtk15 i386 3.6.5-1 [4919 kB] Get: 82 http://deb.debian.org/debian bullseye/main i386 libdcmtk-dev i386 3.6.5-1 [966 kB] Get: 83 http://deb.debian.org/debian bullseye/main i386 libdrm-common all 2.4.104-1 [14.9 kB] Get: 84 http://deb.debian.org/debian bullseye/main i386 libdrm2 i386 2.4.104-1 [44.3 kB] Get: 85 http://deb.debian.org/debian bullseye/main i386 libdrm-amdgpu1 i386 2.4.104-1 [31.5 kB] Get: 86 http://deb.debian.org/debian bullseye/main i386 libpciaccess0 i386 0.16-1 [55.7 kB] Get: 87 http://deb.debian.org/debian bullseye/main i386 libdrm-intel1 i386 2.4.104-1 [74.5 kB] Get: 88 http://deb.debian.org/debian bullseye/main i386 libdrm-nouveau2 i386 2.4.104-1 [28.5 kB] Get: 89 http://deb.debian.org/debian bullseye/main i386 libdrm-radeon1 i386 2.4.104-1 [31.4 kB] Get: 90 http://deb.debian.org/debian bullseye/main i386 libedit2 i386 3.1-20191231-2+b1 [101 kB] Get: 91 http://deb.debian.org/debian bullseye/main i386 libfftw3-double3 i386 3.3.8-2 [640 kB] Get: 92 http://deb.debian.org/debian bullseye/main i386 libfftw3-long3 i386 3.3.8-2 [326 kB] Get: 93 http://deb.debian.org/debian bullseye/main i386 libfftw3-quad3 i386 3.3.8-2 [1762 kB] Get: 94 http://deb.debian.org/debian bullseye/main i386 libfftw3-single3 i386 3.3.8-2 [652 kB] Get: 95 http://deb.debian.org/debian bullseye/main i386 libfftw3-bin i386 3.3.8-2 [53.5 kB] Get: 96 http://deb.debian.org/debian bullseye/main i386 libfftw3-dev i386 3.3.8-2 [3170 kB] Get: 97 http://deb.debian.org/debian bullseye/main i386 libfontenc1 i386 1:1.1.4-1 [24.5 kB] Get: 98 http://deb.debian.org/debian bullseye/main i386 libfreetype6 i386 2.10.4+dfsg-1 [429 kB] Get: 99 http://deb.debian.org/debian bullseye/main i386 libglapi-mesa i386 20.3.5-1 [71.9 kB] Get: 100 http://deb.debian.org/debian bullseye/main i386 libz3-4 i386 4.8.10-1 [7737 kB] Get: 101 http://deb.debian.org/debian bullseye/main i386 libllvm11 i386 1:11.0.1-2 [17.7 MB] Get: 102 http://deb.debian.org/debian bullseye/main i386 libsensors-config all 1:3.6.0-7 [32.3 kB] Get: 103 http://deb.debian.org/debian bullseye/main i386 libsensors5 i386 1:3.6.0-7 [53.2 kB] Get: 104 http://deb.debian.org/debian bullseye/main i386 libvulkan1 i386 1.2.162.0-1 [110 kB] Get: 105 http://deb.debian.org/debian bullseye/main i386 libgl1-mesa-dri i386 20.3.5-1 [9948 kB] Get: 106 http://deb.debian.org/debian bullseye/main i386 libglvnd0 i386 1.3.2-1 [44.1 kB] Get: 107 http://deb.debian.org/debian bullseye/main i386 libxau6 i386 1:1.0.9-1 [20.0 kB] Get: 108 http://deb.debian.org/debian bullseye/main i386 libxdmcp6 i386 1:1.1.2-3 [26.7 kB] Get: 109 http://deb.debian.org/debian bullseye/main i386 libxcb1 i386 1.14-3 [144 kB] Get: 110 http://deb.debian.org/debian bullseye/main i386 libx11-data all 2:1.7.1-1 [310 kB] Get: 111 http://deb.debian.org/debian bullseye/main i386 libx11-6 i386 2:1.7.1-1 [796 kB] Get: 112 http://deb.debian.org/debian bullseye/main i386 libx11-xcb1 i386 2:1.7.1-1 [203 kB] Get: 113 http://deb.debian.org/debian bullseye/main i386 libxcb-dri2-0 i386 1.14-3 [103 kB] Get: 114 http://deb.debian.org/debian bullseye/main i386 libxcb-dri3-0 i386 1.14-3 [103 kB] Get: 115 http://deb.debian.org/debian bullseye/main i386 libxcb-glx0 i386 1.14-3 [120 kB] Get: 116 http://deb.debian.org/debian bullseye/main i386 libxcb-present0 i386 1.14-3 [101 kB] Get: 117 http://deb.debian.org/debian bullseye/main i386 libxcb-shm0 i386 1.14-3 [102 kB] Get: 118 http://deb.debian.org/debian bullseye/main i386 libxcb-sync1 i386 1.14-3 [105 kB] Get: 119 http://deb.debian.org/debian bullseye/main i386 libxcb-xfixes0 i386 1.14-3 [105 kB] Get: 120 http://deb.debian.org/debian bullseye/main i386 libxdamage1 i386 1:1.1.5-2 [15.9 kB] Get: 121 http://deb.debian.org/debian bullseye/main i386 libxext6 i386 2:1.3.3-1.1 [55.2 kB] Get: 122 http://deb.debian.org/debian bullseye/main i386 libxfixes3 i386 1:5.0.3-2 [22.6 kB] Get: 123 http://deb.debian.org/debian bullseye/main i386 libxshmfence1 i386 1.3-1 [8976 B] Get: 124 http://deb.debian.org/debian bullseye/main i386 libxxf86vm1 i386 1:1.1.4-1+b2 [21.7 kB] Get: 125 http://deb.debian.org/debian bullseye/main i386 libglx-mesa0 i386 20.3.5-1 [195 kB] Get: 126 http://deb.debian.org/debian bullseye/main i386 x11-common all 1:7.7+22 [252 kB] Get: 127 http://deb.debian.org/debian bullseye/main i386 libice6 i386 2:1.0.10-1 [60.8 kB] Get: 128 http://deb.debian.org/debian bullseye/main i386 libmxml1 i386 3.2-1 [30.7 kB] Get: 129 http://deb.debian.org/debian bullseye/main i386 libmxml-dev i386 3.2-1 [727 kB] Get: 130 http://deb.debian.org/debian bullseye/main i386 libpixman-1-0 i386 0.40.0-1 [545 kB] Get: 131 http://deb.debian.org/debian bullseye/main i386 libsm6 i386 2:1.2.3-1 [35.7 kB] Get: 132 http://deb.debian.org/debian bullseye/main i386 libsqlite3-dev i386 3.34.1-3 [1001 kB] Get: 133 http://deb.debian.org/debian bullseye/main i386 libunwind8 i386 1.3.2-2 [53.2 kB] Get: 134 http://deb.debian.org/debian bullseye/main i386 libxt6 i386 1:1.2.0-1 [195 kB] Get: 135 http://deb.debian.org/debian bullseye/main i386 libxmu6 i386 2:1.1.2-2+b3 [62.8 kB] Get: 136 http://deb.debian.org/debian bullseye/main i386 libxpm4 i386 1:3.5.12-1 [50.9 kB] Get: 137 http://deb.debian.org/debian bullseye/main i386 libxaw7 i386 2:1.0.13-1.1 [210 kB] Get: 138 http://deb.debian.org/debian bullseye/main i386 libxfont2 i386 1:2.0.4-1 [139 kB] Get: 139 http://deb.debian.org/debian bullseye/main i386 libxkbfile1 i386 1:1.1.0-1 [78.9 kB] Get: 140 http://deb.debian.org/debian bullseye/main i386 libxmuu1 i386 2:1.1.2-2+b3 [24.2 kB] Get: 141 http://deb.debian.org/debian bullseye/main i386 x11-xkb-utils i386 7.7+5 [170 kB] Get: 142 http://deb.debian.org/debian bullseye/main i386 xauth i386 1:1.1-1 [41.2 kB] Get: 143 http://deb.debian.org/debian bullseye/main i386 xkb-data all 2.29-2 [655 kB] Get: 144 http://deb.debian.org/debian bullseye/main i386 xserver-common all 2:1.20.11-1 [2283 kB] Get: 145 http://deb.debian.org/debian bullseye/main i386 libglx0 i386 1.3.2-1 [39.1 kB] Get: 146 http://deb.debian.org/debian bullseye/main i386 libgl1 i386 1.3.2-1 [83.6 kB] Get: 147 http://deb.debian.org/debian bullseye/main i386 xvfb i386 2:1.20.11-1 [3099 kB] Fetched 108 MB in 1s (96.7 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package bsdextrautils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19675 files and directories currently installed.) Preparing to unpack .../000-bsdextrautils_2.36.1-7_i386.deb ... Unpacking bsdextrautils (2.36.1-7) ... Selecting previously unselected package libuchardet0:i386. Preparing to unpack .../001-libuchardet0_0.0.7-1_i386.deb ... Unpacking libuchardet0:i386 (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../002-groff-base_1.22.4-6_i386.deb ... Unpacking groff-base (1.22.4-6) ... Selecting previously unselected package libpipeline1:i386. Preparing to unpack .../003-libpipeline1_1.5.3-1_i386.deb ... Unpacking libpipeline1:i386 (1.5.3-1) ... Selecting previously unselected package man-db. Preparing to unpack .../004-man-db_2.9.4-2_i386.deb ... Unpacking man-db (2.9.4-2) ... Selecting previously unselected package libcharls2:i386. Preparing to unpack .../005-libcharls2_2.2.0+dfsg-2_i386.deb ... Unpacking libcharls2:i386 (2.2.0+dfsg-2) ... Selecting previously unselected package libcharls-dev:i386. Preparing to unpack .../006-libcharls-dev_2.2.0+dfsg-2_i386.deb ... Unpacking libcharls-dev:i386 (2.2.0+dfsg-2) ... Selecting previously unselected package readline-common. Preparing to unpack .../007-readline-common_8.1-1_all.deb ... Unpacking readline-common (8.1-1) ... Selecting previously unselected package libreadline8:i386. Preparing to unpack .../008-libreadline8_8.1-1_i386.deb ... Unpacking libreadline8:i386 (8.1-1) ... Selecting previously unselected package libncurses6:i386. Preparing to unpack .../009-libncurses6_6.2+20201114-2_i386.deb ... Unpacking libncurses6:i386 (6.2+20201114-2) ... Selecting previously unselected package libprocps8:i386. Preparing to unpack .../010-libprocps8_2%3a3.3.17-5_i386.deb ... Unpacking libprocps8:i386 (2:3.3.17-5) ... Selecting previously unselected package procps. Preparing to unpack .../011-procps_2%3a3.3.17-5_i386.deb ... Unpacking procps (2:3.3.17-5) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../012-sensible-utils_0.0.14_all.deb ... Unpacking sensible-utils (0.0.14) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../013-libmagic-mgc_1%3a5.39-3_i386.deb ... Unpacking libmagic-mgc (1:5.39-3) ... Selecting previously unselected package libmagic1:i386. Preparing to unpack .../014-libmagic1_1%3a5.39-3_i386.deb ... Unpacking libmagic1:i386 (1:5.39-3) ... Selecting previously unselected package file. Preparing to unpack .../015-file_1%3a5.39-3_i386.deb ... Unpacking file (1:5.39-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../016-gettext-base_0.21-4_i386.deb ... Unpacking gettext-base (0.21-4) ... Selecting previously unselected package libsigsegv2:i386. Preparing to unpack .../017-libsigsegv2_2.13-1_i386.deb ... Unpacking libsigsegv2:i386 (2.13-1) ... Selecting previously unselected package m4. Preparing to unpack .../018-m4_1.4.18-5_i386.deb ... Unpacking m4 (1.4.18-5) ... Selecting previously unselected package autoconf. Preparing to unpack .../019-autoconf_2.69-14_all.deb ... Unpacking autoconf (2.69-14) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../020-autotools-dev_20180224.1+nmu1_all.deb ... Unpacking autotools-dev (20180224.1+nmu1) ... Selecting previously unselected package automake. Preparing to unpack .../021-automake_1%3a1.16.3-2_all.deb ... Unpacking automake (1:1.16.3-2) ... Selecting previously unselected package autopoint. Preparing to unpack .../022-autopoint_0.21-4_all.deb ... Unpacking autopoint (0.21-4) ... Selecting previously unselected package bc. Preparing to unpack .../023-bc_1.07.1-2+b2_i386.deb ... Unpacking bc (1.07.1-2+b2) ... Selecting previously unselected package cmake-data. Preparing to unpack .../024-cmake-data_3.18.4-2_all.deb ... Unpacking cmake-data (3.18.4-2) ... Selecting previously unselected package libicu67:i386. Preparing to unpack .../025-libicu67_67.1-7_i386.deb ... Unpacking libicu67:i386 (67.1-7) ... Selecting previously unselected package libxml2:i386. Preparing to unpack .../026-libxml2_2.9.10+dfsg-6.7_i386.deb ... Unpacking libxml2:i386 (2.9.10+dfsg-6.7) ... Selecting previously unselected package libarchive13:i386. Preparing to unpack .../027-libarchive13_3.4.3-2+b1_i386.deb ... Unpacking libarchive13:i386 (3.4.3-2+b1) ... Selecting previously unselected package libbrotli1:i386. Preparing to unpack .../028-libbrotli1_1.0.9-2+b2_i386.deb ... Unpacking libbrotli1:i386 (1.0.9-2+b2) ... Selecting previously unselected package libsasl2-modules-db:i386. Preparing to unpack .../029-libsasl2-modules-db_2.1.27+dfsg-2.1_i386.deb ... Unpacking libsasl2-modules-db:i386 (2.1.27+dfsg-2.1) ... Selecting previously unselected package libsasl2-2:i386. Preparing to unpack .../030-libsasl2-2_2.1.27+dfsg-2.1_i386.deb ... Unpacking libsasl2-2:i386 (2.1.27+dfsg-2.1) ... Selecting previously unselected package libldap-2.4-2:i386. Preparing to unpack .../031-libldap-2.4-2_2.4.57+dfsg-3_i386.deb ... Unpacking libldap-2.4-2:i386 (2.4.57+dfsg-3) ... Selecting previously unselected package libnghttp2-14:i386. Preparing to unpack .../032-libnghttp2-14_1.43.0-1_i386.deb ... Unpacking libnghttp2-14:i386 (1.43.0-1) ... Selecting previously unselected package libpsl5:i386. Preparing to unpack .../033-libpsl5_0.21.0-1.2_i386.deb ... Unpacking libpsl5:i386 (0.21.0-1.2) ... 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Setting up bsdextrautils (2.36.1-7) ... update-alternatives: using /usr/bin/write.ul to provide /usr/bin/write (write) in auto mode Setting up libicu67:i386 (67.1-7) ... Setting up libmagic-mgc (1:5.39-3) ... Setting up libcharls2:i386 (2.2.0+dfsg-2) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libglvnd0:i386 (1.3.2-1) ... Setting up libdebhelper-perl (13.3.4) ... Setting up libbrotli1:i386 (1.0.9-2+b2) ... Setting up x11-common (1:7.7+22) ... invoke-rc.d: could not determine current runlevel Setting up X socket directories... /tmp/.X11-unix /tmp/.ICE-unix. Setting up libsensors-config (1:3.6.0-7) ... Setting up libnghttp2-14:i386 (1.43.0-1) ... Setting up libmagic1:i386 (1:5.39-3) ... Setting up libdeflate0:i386 (1.7-1) ... Setting up libfftw3-long3:i386 (3.3.8-2) ... Setting up gettext-base (0.21-4) ... Setting up xkb-data (2.29-2) ... Setting up file (1:5.39-3) ... Setting up libunwind8:i386 (1.3.2-2) ... Setting up libjbig0:i386 (2.1-3.1+b2) ... 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Setting up libxcb-shm0:i386 (1.14-3) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up libxcb-present0:i386 (1.14-3) ... Setting up libxml2-dev:i386 (2.9.10+dfsg-6.7) ... Setting up libllvm11:i386 (1:11.0.1-2) ... Setting up libfreetype6:i386 (2.10.4+dfsg-1) ... Setting up libtiff-dev:i386 (4.2.0-1) ... Setting up libxcb-sync1:i386 (1.14-3) ... Setting up autoconf (2.69-14) ... Setting up libxcb-dri2-0:i386 (1.14-3) ... Setting up dh-strip-nondeterminism (1.12.0-1) ... Setting up libdrm2:i386 (2.4.104-1) ... Setting up dwz (0.13+20210201-1) ... Setting up groff-base (1.22.4-6) ... Setting up procps (2:3.3.17-5) ... Setting up libcurl4:i386 (7.74.0-1.3+b1) ... Setting up libx11-6:i386 (2:1.7.1-1) ... Setting up libxkbfile1:i386 (1:1.1.0-1) ... Setting up libsm6:i386 (2:1.2.3-1) ... Setting up libxfont2:i386 (1:2.0.4-1) ... Setting up libfftw3-dev:i386 (3.3.8-2) ... Setting up libxmuu1:i386 (2:1.1.2-2+b3) ... Setting up libdrm-amdgpu1:i386 (2.4.104-1) ... Setting up automake (1:1.16.3-2) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libxcb-dri3-0:i386 (1.14-3) ... Setting up libx11-xcb1:i386 (2:1.7.1-1) ... Setting up libdrm-nouveau2:i386 (2.4.104-1) ... Setting up libxdamage1:i386 (1:1.1.5-2) ... Setting up libxpm4:i386 (1:3.5.12-1) ... Setting up libdcmtk-dev (3.6.5-1) ... Setting up libdrm-radeon1:i386 (2.4.104-1) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libdrm-intel1:i386 (2.4.104-1) ... Setting up libgl1-mesa-dri:i386 (20.3.5-1) ... Setting up libxext6:i386 (2:1.3.3-1.1) ... Setting up man-db (2.9.4-2) ... Not building database; man-db/auto-update is not 'true'. Setting up libxxf86vm1:i386 (1:1.1.4-1+b2) ... Setting up dh-autoreconf (20) ... Setting up libxfixes3:i386 (1:5.0.3-2) ... Setting up libxt6:i386 (1:1.2.0-1) ... Setting up xauth (1:1.1-1) ... Setting up cmake (3.18.4-2) ... Setting up libxmu6:i386 (2:1.1.2-2+b3) ... Setting up libglx-mesa0:i386 (20.3.5-1) ... Setting up libglx0:i386 (1.3.2-1) ... Setting up debhelper (13.3.4) ... Setting up libxaw7:i386 (2:1.0.13-1.1) ... Setting up libgl1:i386 (1.3.2-1) ... Setting up x11-xkb-utils (7.7+5) ... Setting up xserver-common (2:1.20.11-1) ... Setting up xvfb (2:1.20.11-1) ... Processing triggers for libc-bin (2.31-13) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps Reading package lists... Building dependency tree... Reading state information... fakeroot is already the newest version (1.25.3-1.1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package I: Running cd /build/cmtk-3.3.1p1+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b dpkg-buildpackage: info: source package cmtk dpkg-buildpackage: info: source version 3.3.1p1+dfsg-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 fakeroot debian/rules clean dh clean dh: warning: invalid flag in DEB_BUILD_OPTIONS: " dh: warning: invalid flag in DEB_BUILD_OPTIONS: nocheck" debian/rules override_dh_auto_clean make[1]: Entering directory '/build/cmtk-3.3.1p1+dfsg' dh_auto_clean rm -rf debian/manpages make[1]: Leaving directory '/build/cmtk-3.3.1p1+dfsg' dh_clean rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/cmtk.substvars debian/files rm -fr -- debian/cmtk/ debian/tmp/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a -name autom4te.cache -prune -exec rm -rf {} + \) \) debian/rules build dh build dh: warning: invalid flag in DEB_BUILD_OPTIONS: " dh: warning: invalid flag in DEB_BUILD_OPTIONS: nocheck" dh_update_autotools_config dh_autoreconf debian/rules override_dh_auto_configure make[1]: Entering directory '/build/cmtk-3.3.1p1+dfsg' dh_auto_configure -- \ -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON \ -DBUILD_APPS:BOOL=ON \ -DBUILD_DOCUMENTATION:BOOL=OFF \ -DBUILD_GUI:BOOL=OFF \ -DBUILD_SHARED_LIBS:BOOL=ON \ -DBUILD_TESTING:BOOL=OFF \ -DCMTK_BUILD_DCMTK:BOOL=OFF \ -DCMTK_BUILD_MXML:BOOL=OFF \ -DCMTK_BUILD_NRRD:BOOL=ON \ -DCMTK_BUILD_SQLITE:BOOL=OFF \ -DCMTK_BUILD_ZLIB:BOOL=OFF \ -DCMTK_ROOT_PATH_SRI24:PATH=/usr/share/data/sri24-atlas \ -DCMTK_USE_DCMTK:BOOL=ON \ -DCMTK_USE_FFTW:BOOL=ON \ -DCMTK_USE_QT:BOOL=OFF \ -DCMTK_USE_SMP:BOOL=ON \ -DCMTK_USE_SQLITE:BOOL=ON \ -DDART_TESTING_TIMEOUT:STRING=15000 \ -DMXML_INCLUDE_DIR:PATH=/usr/include \ -DLZMA_INCLUDE_DIRS:PATH=/usr/include/lzma \ -DCMAKE_SKIP_RPATH:BOOL=OFF \ -DCMTK_BUILD_WRAPPER:BOOL=ON \ install -d obj-i686-linux-gnu cd obj-i686-linux-gnu && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/i386-linux-gnu -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DBUILD_APPS:BOOL=ON -DBUILD_DOCUMENTATION:BOOL=OFF -DBUILD_GUI:BOOL=OFF -DBUILD_SHARED_LIBS:BOOL=ON -DBUILD_TESTING:BOOL=OFF -DCMTK_BUILD_DCMTK:BOOL=OFF -DCMTK_BUILD_MXML:BOOL=OFF -DCMTK_BUILD_NRRD:BOOL=ON -DCMTK_BUILD_SQLITE:BOOL=OFF -DCMTK_BUILD_ZLIB:BOOL=OFF -DCMTK_ROOT_PATH_SRI24:PATH=/usr/share/data/sri24-atlas -DCMTK_USE_DCMTK:BOOL=ON -DCMTK_USE_FFTW:BOOL=ON -DCMTK_USE_QT:BOOL=OFF -DCMTK_USE_SMP:BOOL=ON -DCMTK_USE_SQLITE:BOOL=ON -DDART_TESTING_TIMEOUT:STRING=15000 -DMXML_INCLUDE_DIR:PATH=/usr/include -DLZMA_INCLUDE_DIRS:PATH=/usr/include/lzma -DCMAKE_SKIP_RPATH:BOOL=OFF -DCMTK_BUILD_WRAPPER:BOOL=ON .. -- The C compiler identification is GNU 10.2.1 -- The CXX compiler identification is GNU 10.2.1 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Looking for sys/types.h -- Looking for sys/types.h - found -- Looking for stdint.h -- Looking for stdint.h - found -- Looking for stddef.h -- Looking for stddef.h - found -- Check size of int -- Check size of int - done -- Check size of long -- Check size of long - done -- Check size of void* -- Check size of void* - done -- Check size of char -- Check size of char - done -- Check size of short -- Check size of short - done -- Check size of float -- Check size of float - done -- Check size of double -- Check size of double - done -- Looking for limits.h -- Looking for limits.h - found -- Looking for unistd.h -- Looking for unistd.h - found -- Looking for pthread.h -- Looking for pthread.h - found -- Looking for include files sys/types.h, sys/prctl.h -- Looking for include files sys/types.h, sys/prctl.h - found -- Check if the system is big endian -- Searching 16 bit integer -- Check size of unsigned short -- Check size of unsigned short - done -- Searching 16 bit integer - Using unsigned short -- Check if the system is big endian - little endian -- Could NOT find X11 (missing: X11_X11_INCLUDE_PATH X11_X11_LIB) -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Failed -- Looking for pthread_create in pthreads -- Looking for pthread_create in pthreads - not found -- Looking for pthread_create in pthread -- Looking for pthread_create in pthread - found -- Found Threads: TRUE -- Looking for C++ include iostream -- Looking for C++ include iostream - found -- Check for STD namespace -- Check for STD namespace - found -- Check for ANSI scope -- Check for ANSI scope - found -- Check for sstream -- Check for sstream - found -- System is Linux-4.19.0-17-amd64 -- Looking for include file dirent.h -- Looking for include file dirent.h - found -- Looking for include file execinfo.h -- Looking for include file execinfo.h - found -- Looking for include file fcntl.h -- Looking for include file fcntl.h - found -- Looking for include file ieeefp.h -- Looking for include file ieeefp.h - not found -- Looking for include file inttypes.h -- Looking for include file inttypes.h - found -- Looking for include file malloc.h -- Looking for include file malloc.h - found -- Looking for include file pthread.h -- Looking for include file pthread.h - found -- Looking for include file termios.h -- Looking for include file termios.h - found -- Looking for include file unistd.h -- Looking for include file unistd.h - found -- Looking for include file values.h -- Looking for include file values.h - found -- Looking for include file sys/ioctl.h -- Looking for include file sys/ioctl.h - found -- Looking for include file sys/procfs.h -- Looking for include file sys/procfs.h - found -- Looking for include file sys/stat.h -- Looking for include file sys/stat.h - found -- Looking for include file sys/time.h -- Looking for include file sys/time.h - found -- Looking for include file sys/times.h -- Looking for include file sys/times.h - found -- Looking for include file sys/utsname.h -- Looking for include file sys/utsname.h - found -- Check size of ((struct stat*)0)->st_mode -- Check size of ((struct stat*)0)->st_mode - done -- Check size of struct stat64 -- Check size of struct stat64 - failed -- Check if the system is big endian -- Searching 16 bit integer -- Searching 16 bit integer - Using unsigned short -- Check if the system is big endian - little endian -- Check the value of the 22nd bit of a 32-bit quiet-NaN -- Check the value of the 22nd bit of a 32-bit quiet-NaN - 1 -- Looking for C++ include unordered_map -- Looking for C++ include unordered_map - found -- Found OpenMP_C: -fopenmp (found version "4.5") -- Found OpenMP_CXX: -fopenmp (found version "4.5") -- Found OpenMP: TRUE (found version "4.5") -- Looking for include file dispatch/dispatch.h -- Looking for include file dispatch/dispatch.h - not found -- Performing Test CMTK_COMPILER_VAR_AUTO_ARRAYSIZE -- Performing Test CMTK_COMPILER_VAR_AUTO_ARRAYSIZE - Success -- Could NOT find Doxygen (missing: DOXYGEN_EXECUTABLE) -- Found ZLIB: /usr/lib/i386-linux-gnu/libz.so (found version "1.2.11") -- Using system zlib -- Building bundled mxml due to outdated or broken system mxml (minimum version required is 2.7, version 2.8 is broken; installed version is 0.0) -- Found BZip2: /usr/lib/i386-linux-gnu/libbz2.so (found version "1.0.8") -- Looking for BZ2_bzCompressInit -- Looking for BZ2_bzCompressInit - found -- Found system libbz2 -- Could NOT find LZMA (missing: LZMA_LIBRARIES LZMA_INCLUDE_DIRS) -- Found DCMTK: /usr/include/dcmtk/config -- - tested library png -- - tested library tiff -- - tested library CharLS -- Using system DCMTK library. -- Could NOT find PkgConfig (missing: PKG_CONFIG_EXECUTABLE) -- Found SQLite3: /usr/lib/i386-linux-gnu/libsqlite3.so -- Using system sqlite3 library -- Check size of long long -- Check size of long long - done -- Looking for strdup -- Looking for strdup - found -- Looking for snprintf -- Looking for snprintf - found -- Looking for vsnprintf -- Looking for vsnprintf - found CMake Warning (dev) at CMakeLists.txt:698 (EXPORT_LIBRARY_DEPENDENCIES): Policy CMP0033 is not set: The export_library_dependencies command should not be called. Run "cmake --help-policy CMP0033" for policy details. Use the cmake_policy command to set the policy and suppress this warning. This warning is for project developers. Use -Wno-dev to suppress it. -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: BUILD_DOCUMENTATION CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_INSTALL_LIBDIR CMAKE_INSTALL_LOCALSTATEDIR CMAKE_INSTALL_RUNSTATEDIR CMAKE_INSTALL_SYSCONFDIR DART_TESTING_TIMEOUT -- Build files have been written to: /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu make[1]: Leaving directory '/build/cmtk-3.3.1p1+dfsg' dh_auto_build cd obj-i686-linux-gnu && make -j16 "INSTALL=install --strip-program=true" VERBOSE=1 make[1]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' /usr/bin/cmake -S/build/cmtk-3.3.1p1+dfsg -B/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/CMakeFiles /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/build.make Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/depend make -f Utilities/mxml/CMakeFiles/cmtkMxml.dir/build.make Utilities/mxml/CMakeFiles/cmtkMxml.dir/depend make -f libs/Numerics/CMakeFiles/cmtkNumerics.dir/build.make libs/Numerics/CMakeFiles/cmtkNumerics.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/Utilities/mxml /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/mxml /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/mxml/CMakeFiles/cmtkMxml.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/libs/Numerics /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Numerics /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Numerics/CMakeFiles/cmtkNumerics.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/mxml/CMakeFiles/cmtkMxml.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/mxml/CMakeFiles/cmtkMxml.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/mxml/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/mxml/CMakeFiles/cmtkMxml.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Numerics/CMakeFiles/cmtkNumerics.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Numerics/CMakeFiles/cmtkNumerics.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Numerics/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Numerics/CMakeFiles/cmtkNumerics.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/depend.internal". Scanning dependencies of target cmtkMxml make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f Utilities/mxml/CMakeFiles/cmtkMxml.dir/build.make Utilities/mxml/CMakeFiles/cmtkMxml.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' Scanning dependencies of target NrrdIO make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/build.make Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' Scanning dependencies of target cmtkNumerics [ 0%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-get.c.o make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f libs/Numerics/CMakeFiles/cmtkNumerics.dir/build.make libs/Numerics/CMakeFiles/cmtkNumerics.dir/build [ 0%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-set.c.o [ 0%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-node.c.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/mxml -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/cmtkMxml.dir/mxml-get.c.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/mxml/mxml-get.c [ 1%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-entity.c.o [ 1%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-attr.c.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/mxml -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/cmtkMxml.dir/mxml-set.c.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/mxml/mxml-set.c cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/mxml -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/cmtkMxml.dir/mxml-node.c.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/mxml/mxml-node.c [ 1%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-index.c.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/mxml -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/cmtkMxml.dir/mxml-entity.c.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/mxml/mxml-entity.c [ 1%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-private.c.o make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/mxml -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/cmtkMxml.dir/mxml-attr.c.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/mxml/mxml-attr.c cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/mxml -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/cmtkMxml.dir/mxml-index.c.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/mxml/mxml-index.c [ 2%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-file.c.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/mxml -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/cmtkMxml.dir/mxml-private.c.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/mxml/mxml-private.c [ 2%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-search.c.o [ 2%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-string.c.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/mxml -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/cmtkMxml.dir/mxml-file.c.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/mxml/mxml-file.c cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/mxml -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/cmtkMxml.dir/mxml-search.c.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/mxml/mxml-search.c [ 2%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/comment.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/comment.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/comment.c cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/mxml -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/cmtkMxml.dir/mxml-string.c.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/mxml/mxml-string.c [ 2%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/enumsNrrd.o [ 2%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/754.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/enumsNrrd.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/enumsNrrd.c [ 2%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/mop.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/754.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/754.c [ 2%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/string.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/mop.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/mop.c cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/string.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/string.c [ 3%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/ap.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/ap.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/ap.cxx [ 3%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/parseAir.o [ 4%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/defaultsNrrd.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/parseAir.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/parseAir.c cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/defaultsNrrd.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/defaultsNrrd.c [ 4%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/dio.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/dio.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/dio.c [ 4%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/format.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/format.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/format.c [ 4%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/bdsvd.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/bdsvd.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/bdsvd.cxx [ 4%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/parseNrrd.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/parseNrrd.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/parseNrrd.c [ 4%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/bidiagonal.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/bidiagonal.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/bidiagonal.cxx [ 5%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/formatEPS.o [ 5%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/blas.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/blas.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/blas.cxx cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/formatEPS.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/formatEPS.c [ 5%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/encoding.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/encoding.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/encoding.c [ 5%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/encodingAscii.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/encodingAscii.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/encodingAscii.c [ 5%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/formatNRRD.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/formatNRRD.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/formatNRRD.c [ 5%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/formatPNG.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/formatPNG.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/formatPNG.c [ 6%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/encodingBzip2.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/encodingBzip2.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/encodingBzip2.c [ 6%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/formatPNM.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/formatPNM.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/formatPNM.c [ 6%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/accessors.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/accessors.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/accessors.c [ 6%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/encodingGzip.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/encodingGzip.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/encodingGzip.c [ 6%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/formatText.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/formatText.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/formatText.c [ 7%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/array.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/array.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/array.c [ 7%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/encodingHex.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/encodingHex.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/encodingHex.c [ 7%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/formatVTK.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/formatVTK.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/formatVTK.c [ 7%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/read.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/read.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/read.c [ 7%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/arraysNrrd.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/arraysNrrd.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/arraysNrrd.c [ 8%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/encodingRaw.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/encodingRaw.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/encodingRaw.c [ 8%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/gzio.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/gzio.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/gzio.c [ 8%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/cholesky.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/cholesky.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/cholesky.cxx [ 8%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/reorder.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/reorder.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/reorder.c [ 8%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/axis.o [ 8%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/write.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/axis.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/axis.c cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/write.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/write.c [ 9%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/endianAir.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/endianAir.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/endianAir.c [ 9%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/keyvalue.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/keyvalue.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/keyvalue.c [ 9%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/biffbiff.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/biffbiff.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/biffbiff.c [ 9%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/biffmsg.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/biffmsg.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/biffmsg.c [ 10%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/det.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/det.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/det.cxx [ 10%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/endianNrrd.o [ 10%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/gammaf.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/endianNrrd.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/endianNrrd.c cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/gammaf.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/gammaf.cxx [ 11%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/methodsNrrd.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/methodsNrrd.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/methodsNrrd.c [ 11%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/sane.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/sane.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/sane.c [ 11%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/enum.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/enum.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/enum.c [ 11%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/hessenberg.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/hessenberg.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/hessenberg.cxx [ 11%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/miscAir.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/miscAir.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/miscAir.c [ 11%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/simple.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/simple.o -c /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/simple.c [ 11%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/hsschur.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/hsschur.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/hsschur.cxx [ 11%] Linking C shared library ../../bin/libcmtkMxml.so cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/mxml && /usr/bin/cmake -E cmake_link_script CMakeFiles/cmtkMxml.dir/link.txt --verbose=1 /usr/bin/cc -fPIC -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -shared -Wl,-soname,libcmtkMxml.so -o ../../bin/libcmtkMxml.so CMakeFiles/cmtkMxml.dir/mxml-attr.c.o CMakeFiles/cmtkMxml.dir/mxml-entity.c.o CMakeFiles/cmtkMxml.dir/mxml-index.c.o CMakeFiles/cmtkMxml.dir/mxml-private.c.o CMakeFiles/cmtkMxml.dir/mxml-get.c.o CMakeFiles/cmtkMxml.dir/mxml-set.c.o CMakeFiles/cmtkMxml.dir/mxml-file.c.o CMakeFiles/cmtkMxml.dir/mxml-node.c.o CMakeFiles/cmtkMxml.dir/mxml-search.c.o CMakeFiles/cmtkMxml.dir/mxml-string.c.o [ 11%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/ibetaf.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/ibetaf.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/ibetaf.cxx [ 12%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/lbfgsb.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/lbfgsb.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/lbfgsb.cxx [ 12%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/lu.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/lu.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/lu.cxx [ 12%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/lq.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/lq.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/lq.cxx make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 12%] Built target cmtkMxml [ 12%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/nsevd.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/nsevd.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/nsevd.cxx [ 12%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/normaldistr.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/normaldistr.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/normaldistr.cxx [ 13%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/qr.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/qr.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/qr.cxx make -f libs/System/CMakeFiles/cmtkSystem.dir/build.make libs/System/CMakeFiles/cmtkSystem.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/libs/System /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System/CMakeFiles/cmtkSystem.dir/DependInfo.cmake --color= [ 13%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/reflections.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/reflections.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/reflections.cxx [ 13%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/rotations.cxx.o Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System/CMakeFiles/cmtkSystem.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System/CMakeFiles/cmtkSystem.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System/CMakeFiles/cmtkSystem.dir/depend.internal". cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/rotations.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/rotations.cxx [ 13%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/sblas.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/sblas.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/sblas.cxx Scanning dependencies of target cmtkSystem make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f libs/System/CMakeFiles/cmtkSystem.dir/build.make libs/System/CMakeFiles/cmtkSystem.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 13%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLine.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLine.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.cxx [ 13%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/sevd.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/sevd.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/sevd.cxx [ 13%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/spddet.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/spddet.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/spddet.cxx [ 14%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/studenttdistr.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/studenttdistr.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/studenttdistr.cxx [ 14%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/studentttests.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/studentttests.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/studentttests.cxx [ 14%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/svd.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/svd.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/svd.cxx [ 15%] Linking C shared library ../../bin/libNrrdIO.so cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO && /usr/bin/cmake -E cmake_link_script CMakeFiles/NrrdIO.dir/link.txt --verbose=1 /usr/bin/cc -fPIC -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -shared -Wl,-soname,libNrrdIO.so -o ../../bin/libNrrdIO.so CMakeFiles/NrrdIO.dir/comment.o CMakeFiles/NrrdIO.dir/enumsNrrd.o CMakeFiles/NrrdIO.dir/mop.o CMakeFiles/NrrdIO.dir/string.o CMakeFiles/NrrdIO.dir/754.o CMakeFiles/NrrdIO.dir/defaultsNrrd.o CMakeFiles/NrrdIO.dir/parseAir.o CMakeFiles/NrrdIO.dir/dio.o CMakeFiles/NrrdIO.dir/format.o CMakeFiles/NrrdIO.dir/parseNrrd.o CMakeFiles/NrrdIO.dir/formatEPS.o CMakeFiles/NrrdIO.dir/encoding.o CMakeFiles/NrrdIO.dir/formatNRRD.o CMakeFiles/NrrdIO.dir/encodingAscii.o CMakeFiles/NrrdIO.dir/formatPNG.o CMakeFiles/NrrdIO.dir/encodingBzip2.o CMakeFiles/NrrdIO.dir/formatPNM.o CMakeFiles/NrrdIO.dir/accessors.o CMakeFiles/NrrdIO.dir/encodingGzip.o CMakeFiles/NrrdIO.dir/formatText.o CMakeFiles/NrrdIO.dir/array.o CMakeFiles/NrrdIO.dir/encodingHex.o CMakeFiles/NrrdIO.dir/formatVTK.o CMakeFiles/NrrdIO.dir/read.o CMakeFiles/NrrdIO.dir/arraysNrrd.o CMakeFiles/NrrdIO.dir/encodingRaw.o CMakeFiles/NrrdIO.dir/gzio.o CMakeFiles/NrrdIO.dir/reorder.o CMakeFiles/NrrdIO.dir/write.o CMakeFiles/NrrdIO.dir/axis.o CMakeFiles/NrrdIO.dir/endianAir.o CMakeFiles/NrrdIO.dir/keyvalue.o CMakeFiles/NrrdIO.dir/biffbiff.o CMakeFiles/NrrdIO.dir/biffmsg.o CMakeFiles/NrrdIO.dir/endianNrrd.o CMakeFiles/NrrdIO.dir/methodsNrrd.o CMakeFiles/NrrdIO.dir/sane.o CMakeFiles/NrrdIO.dir/enum.o CMakeFiles/NrrdIO.dir/miscAir.o CMakeFiles/NrrdIO.dir/simple.o -lz [ 15%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/tdevd.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/tdevd.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/tdevd.cxx make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 15%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/tridiagonal.cxx.o [ 15%] Built target NrrdIO cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/tridiagonal.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/tridiagonal.cxx [ 16%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/mersenne.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/mersenne.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Numerics/mersenne.cxx [ 16%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineCallback.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineCallback.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineCallback.cxx [ 17%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineItem.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineItem.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineItem.cxx [ 17%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToAction.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToAction.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineKeyToAction.cxx [ 17%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToActionEnum.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToActionEnum.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineKeyToActionEnum.cxx In file included from /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.cxx:33: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 17%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToActionSingle.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToActionSingle.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineKeyToActionSingle.cxx /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.cxx:123:58: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 123 | CommandLine::Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ) | ^~~~~ [ 17%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineNonOptionParameter.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineNonOptionParameter.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineNonOptionParameter.cxx [ 18%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineNonOptionParameterVector.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineNonOptionParameterVector.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineNonOptionParameterVector.cxx [ 18%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineHelp.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineHelp.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineHelp.cxx [ 18%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineMan.cxx.o In file included from /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineCallback.cxx:33: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineMan.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineMan.cxx In file included from /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineKeyToAction.cxx:33: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 18%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineXML.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineXML.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineXML.cxx /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineMan.cxx:61:45: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 61 | StdOut << ".TH " << cmd << " \"1\" \"" << __DATE__ << "\" \"CMTK " << ppit->second << "\" \"The Computational Morphometry Toolkit\"\n"; | ^~~~~~~~ [ 18%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineWiki.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineWiki.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineWiki.cxx In file included from /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineItem.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineKeyToActionSingle.cxx:33: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineKeyToActionEnum.cxx:33: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 19%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCompressedStream.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCompressedStream.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCompressedStream.cxx In file included from /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineNonOptionParameter.cxx:31: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineNonOptionParameterVector.cxx:31: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineHelp.cxx:34: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineMan.cxx:34: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 19%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamFile.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamFile.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCompressedStreamFile.cxx In file included from /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineXML.cxx:34: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 19%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamPipe.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamPipe.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCompressedStreamPipe.cxx In file included from /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineWiki.cxx:34: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 19%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamReaderBase.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamReaderBase.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCompressedStreamReaderBase.cxx [ 19%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamZlib.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamZlib.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCompressedStreamZlib.cxx [ 19%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkConsole.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkConsole.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkConsole.cxx [ 20%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkFileUtils.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkFileUtils.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkFileUtils.cxx [ 20%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkMemory.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkMemory.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkMemory.cxx [ 20%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkMountPoints.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkMountPoints.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkMountPoints.cxx [ 20%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkProgress.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkProgress.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkProgress.cxx [ 20%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkProgressConsole.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkProgressConsole.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkProgressConsole.cxx [ 21%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkRegressionTracker.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkRegressionTracker.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkRegressionTracker.cxx [ 21%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkStackBacktrace.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkStackBacktrace.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkStackBacktrace.cxx [ 21%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkThreads.cxx.o [ 21%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkStrUtility.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkThreads.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkThreads.cxx cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkStrUtility.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkStrUtility.cxx /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkFileUtils.cxx: In function 'std::string cmtk::FileUtils::GetAbsolutePath(const string&)': /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkFileUtils.cxx:147:11: warning: ignoring return value of 'char* getcwd(char*, size_t)' declared with attribute 'warn_unused_result' [-Wunused-result] 147 | getcwd( absPath, PATH_MAX ); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~ [ 21%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkThreadPoolThreads.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkThreadPoolThreads.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkThreadPoolThreads.cxx [ 22%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkThreadSemaphore.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkThreadSemaphore.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkThreadSemaphore.cxx [ 22%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkTimers.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkTimers.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkTimers.cxx [ 22%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamBZip2.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamBZip2.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCompressedStreamBZip2.cxx [ 22%] Linking CXX shared library ../../bin/libcmtkNumerics.so cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Numerics && /usr/bin/cmake -E cmake_link_script CMakeFiles/cmtkNumerics.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -shared -Wl,-soname,libcmtkNumerics.so -o ../../bin/libcmtkNumerics.so CMakeFiles/cmtkNumerics.dir/ap.cxx.o CMakeFiles/cmtkNumerics.dir/bdsvd.cxx.o CMakeFiles/cmtkNumerics.dir/bidiagonal.cxx.o CMakeFiles/cmtkNumerics.dir/blas.cxx.o CMakeFiles/cmtkNumerics.dir/cholesky.cxx.o CMakeFiles/cmtkNumerics.dir/det.cxx.o CMakeFiles/cmtkNumerics.dir/gammaf.cxx.o CMakeFiles/cmtkNumerics.dir/hessenberg.cxx.o CMakeFiles/cmtkNumerics.dir/hsschur.cxx.o CMakeFiles/cmtkNumerics.dir/ibetaf.cxx.o CMakeFiles/cmtkNumerics.dir/lbfgsb.cxx.o CMakeFiles/cmtkNumerics.dir/lq.cxx.o CMakeFiles/cmtkNumerics.dir/lu.cxx.o CMakeFiles/cmtkNumerics.dir/normaldistr.cxx.o CMakeFiles/cmtkNumerics.dir/nsevd.cxx.o CMakeFiles/cmtkNumerics.dir/qr.cxx.o CMakeFiles/cmtkNumerics.dir/reflections.cxx.o CMakeFiles/cmtkNumerics.dir/rotations.cxx.o CMakeFiles/cmtkNumerics.dir/sblas.cxx.o CMakeFiles/cmtkNumerics.dir/sevd.cxx.o CMakeFiles/cmtkNumerics.dir/spddet.cxx.o CMakeFiles/cmtkNumerics.dir/studenttdistr.cxx.o CMakeFiles/cmtkNumerics.dir/studentttests.cxx.o CMakeFiles/cmtkNumerics.dir/svd.cxx.o CMakeFiles/cmtkNumerics.dir/tdevd.cxx.o CMakeFiles/cmtkNumerics.dir/tridiagonal.cxx.o CMakeFiles/cmtkNumerics.dir/mersenne.cxx.o -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,::::::::::::: make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 22%] Built target cmtkNumerics [ 22%] Linking CXX shared library ../../bin/libcmtkSystem.so cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System && /usr/bin/cmake -E cmake_link_script CMakeFiles/cmtkSystem.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -shared -Wl,-soname,libcmtkSystem.so -o ../../bin/libcmtkSystem.so CMakeFiles/cmtkSystem.dir/cmtkCommandLine.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineCallback.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineItem.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToAction.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToActionEnum.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToActionSingle.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineNonOptionParameter.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineNonOptionParameterVector.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineHelp.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineMan.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineXML.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineWiki.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCompressedStream.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamFile.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamPipe.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamReaderBase.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamZlib.cxx.o CMakeFiles/cmtkSystem.dir/cmtkConsole.cxx.o CMakeFiles/cmtkSystem.dir/cmtkFileUtils.cxx.o CMakeFiles/cmtkSystem.dir/cmtkMemory.cxx.o CMakeFiles/cmtkSystem.dir/cmtkMountPoints.cxx.o CMakeFiles/cmtkSystem.dir/cmtkProgress.cxx.o CMakeFiles/cmtkSystem.dir/cmtkProgressConsole.cxx.o CMakeFiles/cmtkSystem.dir/cmtkRegressionTracker.cxx.o CMakeFiles/cmtkSystem.dir/cmtkStackBacktrace.cxx.o CMakeFiles/cmtkSystem.dir/cmtkStrUtility.cxx.o CMakeFiles/cmtkSystem.dir/cmtkThreads.cxx.o CMakeFiles/cmtkSystem.dir/cmtkThreadPoolThreads.cxx.o CMakeFiles/cmtkSystem.dir/cmtkThreadSemaphore.cxx.o CMakeFiles/cmtkSystem.dir/cmtkTimers.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamBZip2.cxx.o -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: -lbz2 -lz ../../bin/libcmtkMxml.so -lfftw3_omp -lfftw3 -lfftw3_threads make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 22%] Built target cmtkSystem make -f libs/Base/CMakeFiles/cmtkBase.dir/build.make libs/Base/CMakeFiles/cmtkBase.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/libs/Base /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base/CMakeFiles/cmtkBase.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base/CMakeFiles/cmtkBase.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base/CMakeFiles/cmtkBase.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base/CMakeFiles/cmtkBase.dir/depend.internal". Scanning dependencies of target cmtkBase make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f libs/Base/CMakeFiles/cmtkBase.dir/build.make libs/Base/CMakeFiles/cmtkBase.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 22%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkActiveDeformationModel.cxx.o [ 23%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkAffineXform.cxx.o [ 23%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkActiveShapeModel.cxx.o [ 23%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkAffineXformUniformVolume.cxx.o [ 23%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkAnatomicalOrientation.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkActiveDeformationModel.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkActiveDeformationModel.cxx [ 23%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkAnatomicalOrientationBase.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkActiveShapeModel.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkActiveShapeModel.cxx [ 24%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDataGridLocalCorrelation.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkAffineXform.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkAffineXform.cxx cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkAffineXformUniformVolume.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkAffineXformUniformVolume.cxx cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkAnatomicalOrientation.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkAnatomicalOrientation.cxx [ 24%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkAnatomicalOrientationPermutationMatrix.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkAnatomicalOrientationBase.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkAnatomicalOrientationBase.cxx cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkDataGridLocalCorrelation.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkDataGridLocalCorrelation.cxx [ 24%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkBitVector.cxx.o [ 25%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkCompatibilityMatrix4x4.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkAnatomicalOrientationPermutationMatrix.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkAnatomicalOrientationPermutationMatrix.cxx [ 25%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDataGrid.cxx.o [ 25%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDataGridConnectedComponents.cxx.o [ 25%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDataGridFilter.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkBitVector.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkBitVector.cxx [ 25%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDataGrid_Crop.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkCompatibilityMatrix4x4.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkCompatibilityMatrix4x4.cxx [ 25%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDataGridMorphologicalOperators.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkDataGrid.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkDataGrid.cxx cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkDataGrid_Crop.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkDataGrid_Crop.cxx cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkDataGridFilter.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkDataGridFilter.cxx cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkDataGridConnectedComponents.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkDataGridConnectedComponents.cxx cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkDataGridMorphologicalOperators.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkDataGridMorphologicalOperators.cxx [ 25%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDeformationField.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkDeformationField.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkDeformationField.cxx [ 25%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDeformationField_Jacobian.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkDeformationField_Jacobian.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkDeformationField_Jacobian.cxx [ 25%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDirectionSet.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkDirectionSet.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkDirectionSet.cxx [ 26%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFilterVolume.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkFilterVolume.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkFilterVolume.cxx [ 26%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitAffineToLandmarks.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkFitAffineToLandmarks.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkFitAffineToLandmarks.cxx [ 26%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitAffineToWarpXform.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkFitAffineToWarpXform.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkFitAffineToWarpXform.cxx [ 26%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitAffineToXformList.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkFitAffineToXformList.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkFitAffineToXformList.cxx [ 27%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitPolynomialToLandmarks.cxx.o [ 27%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitSplineWarpToDeformationField.cxx.o [ 27%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitRigidToLandmarks.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkFitPolynomialToLandmarks.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkFitPolynomialToLandmarks.cxx cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkFitRigidToLandmarks.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkFitRigidToLandmarks.cxx cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkFitSplineWarpToDeformationField.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkFitSplineWarpToDeformationField.cxx [ 27%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitSplineWarpToLandmarks.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkFitSplineWarpToLandmarks.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkFitSplineWarpToLandmarks.cxx [ 27%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitSplineWarpToXformList.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkFitSplineWarpToXformList.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkFitSplineWarpToXformList.cxx [ 27%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitToXformListBase.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkFitToXformListBase.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkFitToXformListBase.cxx [ 28%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFunctional.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkFunctional.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkFunctional.cxx [ 28%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkGeneralLinearModel.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkGeneralLinearModel.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkGeneralLinearModel.cxx [ 28%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkHistogram.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkHistogram.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkHistogram.cxx [ 28%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkHypothesisTests.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkHypothesisTests.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkHypothesisTests.cxx [ 28%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperation.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperation.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperation.cxx [ 29%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationCropRegion.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationCropRegion.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationCropRegion.cxx [ 29%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationCropThreshold.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationCropThreshold.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationCropThreshold.cxx [ 29%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationDistanceMap.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationDistanceMap.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationDistanceMap.cxx [ 29%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationDownsample.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationDownsample.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationDownsample.cxx [ 29%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationHistogramEqualization.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationHistogramEqualization.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationHistogramEqualization.cxx [ 30%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationMapValues.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationMapValues.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationMapValues.cxx [ 30%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationRegionFilter.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationRegionFilter.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationRegionFilter.cxx /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationCropThreshold.cxx: In member function 'virtual cmtk::UniformVolume::SmartPtr cmtk::ImageOperationCropThreshold::Apply(cmtk::UniformVolume::SmartPtr&)': /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationCropThreshold.cxx:41:24: warning: format '%d' expects argument of type 'int', but argument 2 has type 'long long int' [-Wformat=] 41 | printf( "AutoCrop %d,%d,%d,%d,%d,%d\n", cropRegion.From()[0], cropRegion.From()[1], cropRegion.From()[2], cropRegion.To()[0], cropRegion.To()[1], cropRegion.To()[2] ); | ~^ | | | int | %lld /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationCropThreshold.cxx:41:27: warning: format '%d' expects argument of type 'int', but argument 3 has type 'long long int' [-Wformat=] 41 | printf( "AutoCrop %d,%d,%d,%d,%d,%d\n", cropRegion.From()[0], cropRegion.From()[1], cropRegion.From()[2], cropRegion.To()[0], cropRegion.To()[1], cropRegion.To()[2] ); | ~^ | | | int | %lld /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationCropThreshold.cxx:41:30: warning: format '%d' expects argument of type 'int', but argument 4 has type 'long long int' [-Wformat=] 41 | printf( "AutoCrop %d,%d,%d,%d,%d,%d\n", cropRegion.From()[0], cropRegion.From()[1], cropRegion.From()[2], cropRegion.To()[0], cropRegion.To()[1], cropRegion.To()[2] ); | ~^ | | | int | %lld /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationCropThreshold.cxx:41:33: warning: format '%d' expects argument of type 'int', but argument 5 has type 'long long int' [-Wformat=] 41 | printf( "AutoCrop %d,%d,%d,%d,%d,%d\n", cropRegion.From()[0], cropRegion.From()[1], cropRegion.From()[2], cropRegion.To()[0], cropRegion.To()[1], cropRegion.To()[2] ); | ~^ | | | int | %lld /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationCropThreshold.cxx:41:36: warning: format '%d' expects argument of type 'int', but argument 6 has type 'long long int' [-Wformat=] 41 | printf( "AutoCrop %d,%d,%d,%d,%d,%d\n", cropRegion.From()[0], cropRegion.From()[1], cropRegion.From()[2], cropRegion.To()[0], cropRegion.To()[1], cropRegion.To()[2] ); | ~^ | | | int | %lld /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationCropThreshold.cxx:41:39: warning: format '%d' expects argument of type 'int', but argument 7 has type 'long long int' [-Wformat=] 41 | printf( "AutoCrop %d,%d,%d,%d,%d,%d\n", cropRegion.From()[0], cropRegion.From()[1], cropRegion.From()[2], cropRegion.To()[0], cropRegion.To()[1], cropRegion.To()[2] ); | ~^ | | | int | %lld [ 30%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationResampleIsotropic.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationResampleIsotropic.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationResampleIsotropic.cxx [ 30%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationScaleToRange.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationScaleToRange.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationScaleToRange.cxx [ 30%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationThreshold.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationThreshold.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationThreshold.cxx [ 31%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationOtsuThreshold.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationOtsuThreshold.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationOtsuThreshold.cxx [ 31%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationPruneHistogram.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationPruneHistogram.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationPruneHistogram.cxx /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationDownsample.cxx: In static member function 'static void cmtk::ImageOperationDownsample::NewGeneric(bool, const char*)': /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationDownsample.cxx:54:43: warning: format '%d' expects argument of type 'int*', but argument 3 has type 'cmtk::Types::GridIndexType*' {aka 'long long int*'} [-Wformat=] 54 | const size_t nFactors = sscanf( arg, "%5d,%5d,%5d", &factorsX, &factorsY, &factorsZ ); | ~~^ ~~~~~~~~~ | | | | int* cmtk::Types::GridIndexType* {aka long long int*} | %5lld /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationDownsample.cxx:54:47: warning: format '%d' expects argument of type 'int*', but argument 4 has type 'cmtk::Types::GridIndexType*' {aka 'long long int*'} [-Wformat=] 54 | const size_t nFactors = sscanf( arg, "%5d,%5d,%5d", &factorsX, &factorsY, &factorsZ ); | ~~^ ~~~~~~~~~ | | | | int* cmtk::Types::GridIndexType* {aka long long int*} | %5lld /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationDownsample.cxx:54:51: warning: format '%d' expects argument of type 'int*', but argument 5 has type 'cmtk::Types::GridIndexType*' {aka 'long long int*'} [-Wformat=] 54 | const size_t nFactors = sscanf( arg, "%5d,%5d,%5d", &factorsX, &factorsY, &factorsZ ); | ~~^ ~~~~~~~~~ | | | | int* cmtk::Types::GridIndexType* {aka long long int*} | %5lld [ 31%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationRevert.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationRevert.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationRevert.cxx In file included from /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationHistogramEqualization.cxx:34: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 31%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkJointHistogram.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkJointHistogram.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkJointHistogram.cxx [ 31%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkJointHistogramBase.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkJointHistogramBase.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkJointHistogramBase.cxx [ 32%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkLandmark.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkLandmark.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkLandmark.cxx [ 32%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkLandmarkPair.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkLandmarkPair.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkLandmarkPair.cxx [ 32%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkLandmarkList.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkLandmarkList.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkLandmarkList.cxx [ 32%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkLandmarkPairList.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkLandmarkPairList.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkLandmarkPairList.cxx In file included from /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationScaleToRange.cxx:33: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 32%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkMagphanEMR051.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkMagphanEMR051.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMagphanEMR051.cxx [ 33%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkMagphanEMR051_GetPhantomImage.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkMagphanEMR051_GetPhantomImage.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMagphanEMR051_GetPhantomImage.cxx [ 33%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkMathFunctionWrappers.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkMathFunctionWrappers.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMathFunctionWrappers.cxx [ 33%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkMathUtil_LinAlg.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkMathUtil_LinAlg.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMathUtil_LinAlg.cxx [ 33%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkMathUtil_Random.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkMathUtil_Random.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMathUtil_Random.cxx [ 33%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkMathUtil_Statistics.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkMathUtil_Statistics.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMathUtil_Statistics.cxx [ 34%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkMatrix3x3.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkMatrix3x3.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMatrix3x3.cxx [ 34%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkMatrix4x4.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkMatrix4x4.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMatrix4x4.cxx [ 34%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkMetaInformationObject.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkMetaInformationObject.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMetaInformationObject.cxx [ 34%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkParametricPlane.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkParametricPlane.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkParametricPlane.cxx [ 34%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkPolynomialXform.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkPolynomialXform.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkPolynomialXform.cxx [ 34%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkScalarImage.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkScalarImage.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkScalarImage.cxx [ 35%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkSegmentationLabel.cxx.o [ 35%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkScalarImageGradientField.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkSegmentationLabel.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkSegmentationLabel.cxx cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkScalarImageGradientField.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkScalarImageGradientField.cxx [ 35%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkSplineWarpXform.cxx [ 35%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform_Inverse.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform_Inverse.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkSplineWarpXform_Inverse.cxx [ 35%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform_Jacobian.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform_Jacobian.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkSplineWarpXform_Jacobian.cxx [ 36%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform_Rigidity.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform_Rigidity.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkSplineWarpXform_Rigidity.cxx [ 36%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkSplineWarpXformUniformVolume.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkSplineWarpXformUniformVolume.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkSplineWarpXformUniformVolume.cxx [ 36%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkTransformChangeToSpaceAffine.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkTransformChangeToSpaceAffine.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkTransformChangeToSpaceAffine.cxx [ 36%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkTransformChangeFromSpaceAffine.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkTransformChangeFromSpaceAffine.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkTransformChangeFromSpaceAffine.cxx [ 36%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkTransformedVolumeAxes.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkTransformedVolumeAxes.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkTransformedVolumeAxes.cxx [ 37%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkTypedArray.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkTypedArray.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkTypedArray.cxx [ 37%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkTypedArrayFunctionHistogramMatching.cxx.o [ 37%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkTypedArray_Statistics.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkTypedArrayFunctionHistogramMatching.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkTypedArrayFunctionHistogramMatching.cxx cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkTypedArray_Statistics.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkTypedArray_Statistics.cxx [ 37%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkTypedArrayFunctionHistogramEqualization.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkTypedArrayFunctionHistogramEqualization.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkTypedArrayFunctionHistogramEqualization.cxx [ 37%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkTypedArrayNoiseEstimatorNaiveGaussian.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkTypedArrayNoiseEstimatorNaiveGaussian.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkTypedArrayNoiseEstimatorNaiveGaussian.cxx [ 38%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkTypes.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkTypes.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkTypes.cxx [ 38%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformDistanceMap.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkUniformDistanceMap.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkUniformDistanceMap.cxx [ 38%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolume.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkUniformVolume.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkUniformVolume.cxx [ 38%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Crop.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Crop.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkUniformVolume_Crop.cxx [ 38%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Differential.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Differential.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkUniformVolume_Differential.cxx [ 39%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Resample.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Resample.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkUniformVolume_Resample.cxx [ 39%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Space.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Space.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkUniformVolume_Space.cxx [ 39%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolumeGaussianFilter.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkUniformVolumeGaussianFilter.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkUniformVolumeGaussianFilter.cxx [ 39%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolumeLaplaceFilter.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkUniformVolumeLaplaceFilter.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkUniformVolumeLaplaceFilter.cxx [ 39%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolumeInterpolatorBase.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkUniformVolumeInterpolatorBase.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkUniformVolumeInterpolatorBase.cxx [ 40%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolumeInterpolatorPartialVolume.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkUniformVolumeInterpolatorPartialVolume.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkUniformVolumeInterpolatorPartialVolume.cxx [ 40%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolumeMorphologicalOperators.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkUniformVolumeMorphologicalOperators.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkUniformVolumeMorphologicalOperators.cxx [ 40%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolumePainter.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkUniformVolumePainter.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkUniformVolumePainter.cxx [ 40%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkVolumeClipping.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkVolumeClipping.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkVolumeClipping.cxx [ 40%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkVolume.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkVolume.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkVolume.cxx [ 41%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkVolumeGridToGridLookup.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkVolumeGridToGridLookup.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkVolumeGridToGridLookup.cxx [ 41%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkWarpXform.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkWarpXform.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkWarpXform.cxx [ 41%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkXform.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkXform.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkXform.cxx [ 41%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkXformList.cxx.o [ 41%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkXform_Inverse.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkXform_Inverse.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkXform_Inverse.cxx cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkXformList.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkXformList.cxx [ 42%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkXformListEntry.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkXformListEntry.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Base/cmtkXformListEntry.cxx [ 42%] Linking CXX shared library ../../bin/libcmtkBase.so cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base && /usr/bin/cmake -E cmake_link_script CMakeFiles/cmtkBase.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -shared -Wl,-soname,libcmtkBase.so -o ../../bin/libcmtkBase.so CMakeFiles/cmtkBase.dir/cmtkActiveDeformationModel.cxx.o CMakeFiles/cmtkBase.dir/cmtkActiveShapeModel.cxx.o CMakeFiles/cmtkBase.dir/cmtkAffineXform.cxx.o CMakeFiles/cmtkBase.dir/cmtkAffineXformUniformVolume.cxx.o CMakeFiles/cmtkBase.dir/cmtkAnatomicalOrientation.cxx.o CMakeFiles/cmtkBase.dir/cmtkAnatomicalOrientationBase.cxx.o CMakeFiles/cmtkBase.dir/cmtkAnatomicalOrientationPermutationMatrix.cxx.o CMakeFiles/cmtkBase.dir/cmtkBitVector.cxx.o CMakeFiles/cmtkBase.dir/cmtkCompatibilityMatrix4x4.cxx.o CMakeFiles/cmtkBase.dir/cmtkDataGrid.cxx.o CMakeFiles/cmtkBase.dir/cmtkDataGrid_Crop.cxx.o CMakeFiles/cmtkBase.dir/cmtkDataGridFilter.cxx.o CMakeFiles/cmtkBase.dir/cmtkDataGridConnectedComponents.cxx.o CMakeFiles/cmtkBase.dir/cmtkDataGridLocalCorrelation.cxx.o CMakeFiles/cmtkBase.dir/cmtkDataGridMorphologicalOperators.cxx.o CMakeFiles/cmtkBase.dir/cmtkDeformationField.cxx.o CMakeFiles/cmtkBase.dir/cmtkDeformationField_Jacobian.cxx.o CMakeFiles/cmtkBase.dir/cmtkDirectionSet.cxx.o CMakeFiles/cmtkBase.dir/cmtkFilterVolume.cxx.o CMakeFiles/cmtkBase.dir/cmtkFitAffineToLandmarks.cxx.o CMakeFiles/cmtkBase.dir/cmtkFitAffineToWarpXform.cxx.o CMakeFiles/cmtkBase.dir/cmtkFitAffineToXformList.cxx.o CMakeFiles/cmtkBase.dir/cmtkFitPolynomialToLandmarks.cxx.o CMakeFiles/cmtkBase.dir/cmtkFitRigidToLandmarks.cxx.o CMakeFiles/cmtkBase.dir/cmtkFitSplineWarpToDeformationField.cxx.o CMakeFiles/cmtkBase.dir/cmtkFitSplineWarpToLandmarks.cxx.o CMakeFiles/cmtkBase.dir/cmtkFitSplineWarpToXformList.cxx.o CMakeFiles/cmtkBase.dir/cmtkFitToXformListBase.cxx.o CMakeFiles/cmtkBase.dir/cmtkFunctional.cxx.o CMakeFiles/cmtkBase.dir/cmtkGeneralLinearModel.cxx.o CMakeFiles/cmtkBase.dir/cmtkHistogram.cxx.o CMakeFiles/cmtkBase.dir/cmtkHypothesisTests.cxx.o CMakeFiles/cmtkBase.dir/cmtkImageOperation.cxx.o CMakeFiles/cmtkBase.dir/cmtkImageOperationCropRegion.cxx.o CMakeFiles/cmtkBase.dir/cmtkImageOperationCropThreshold.cxx.o CMakeFiles/cmtkBase.dir/cmtkImageOperationDistanceMap.cxx.o CMakeFiles/cmtkBase.dir/cmtkImageOperationDownsample.cxx.o CMakeFiles/cmtkBase.dir/cmtkImageOperationHistogramEqualization.cxx.o CMakeFiles/cmtkBase.dir/cmtkImageOperationMapValues.cxx.o CMakeFiles/cmtkBase.dir/cmtkImageOperationRegionFilter.cxx.o CMakeFiles/cmtkBase.dir/cmtkImageOperationResampleIsotropic.cxx.o CMakeFiles/cmtkBase.dir/cmtkImageOperationScaleToRange.cxx.o CMakeFiles/cmtkBase.dir/cmtkImageOperationThreshold.cxx.o CMakeFiles/cmtkBase.dir/cmtkImageOperationOtsuThreshold.cxx.o CMakeFiles/cmtkBase.dir/cmtkImageOperationPruneHistogram.cxx.o CMakeFiles/cmtkBase.dir/cmtkImageOperationRevert.cxx.o CMakeFiles/cmtkBase.dir/cmtkJointHistogram.cxx.o CMakeFiles/cmtkBase.dir/cmtkJointHistogramBase.cxx.o CMakeFiles/cmtkBase.dir/cmtkLandmark.cxx.o CMakeFiles/cmtkBase.dir/cmtkLandmarkPair.cxx.o CMakeFiles/cmtkBase.dir/cmtkLandmarkList.cxx.o CMakeFiles/cmtkBase.dir/cmtkLandmarkPairList.cxx.o CMakeFiles/cmtkBase.dir/cmtkMagphanEMR051.cxx.o CMakeFiles/cmtkBase.dir/cmtkMagphanEMR051_GetPhantomImage.cxx.o CMakeFiles/cmtkBase.dir/cmtkMathFunctionWrappers.cxx.o CMakeFiles/cmtkBase.dir/cmtkMathUtil_LinAlg.cxx.o CMakeFiles/cmtkBase.dir/cmtkMathUtil_Random.cxx.o CMakeFiles/cmtkBase.dir/cmtkMathUtil_Statistics.cxx.o CMakeFiles/cmtkBase.dir/cmtkMatrix3x3.cxx.o CMakeFiles/cmtkBase.dir/cmtkMatrix4x4.cxx.o CMakeFiles/cmtkBase.dir/cmtkMetaInformationObject.cxx.o CMakeFiles/cmtkBase.dir/cmtkParametricPlane.cxx.o CMakeFiles/cmtkBase.dir/cmtkPolynomialXform.cxx.o CMakeFiles/cmtkBase.dir/cmtkScalarImage.cxx.o CMakeFiles/cmtkBase.dir/cmtkScalarImageGradientField.cxx.o CMakeFiles/cmtkBase.dir/cmtkSegmentationLabel.cxx.o CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform.cxx.o CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform_Inverse.cxx.o CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform_Jacobian.cxx.o CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform_Rigidity.cxx.o CMakeFiles/cmtkBase.dir/cmtkSplineWarpXformUniformVolume.cxx.o CMakeFiles/cmtkBase.dir/cmtkTransformChangeToSpaceAffine.cxx.o CMakeFiles/cmtkBase.dir/cmtkTransformChangeFromSpaceAffine.cxx.o CMakeFiles/cmtkBase.dir/cmtkTransformedVolumeAxes.cxx.o CMakeFiles/cmtkBase.dir/cmtkTypedArray.cxx.o CMakeFiles/cmtkBase.dir/cmtkTypedArray_Statistics.cxx.o CMakeFiles/cmtkBase.dir/cmtkTypedArrayFunctionHistogramMatching.cxx.o CMakeFiles/cmtkBase.dir/cmtkTypedArrayFunctionHistogramEqualization.cxx.o CMakeFiles/cmtkBase.dir/cmtkTypedArrayNoiseEstimatorNaiveGaussian.cxx.o CMakeFiles/cmtkBase.dir/cmtkTypes.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformDistanceMap.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformVolume.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Crop.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Differential.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Resample.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Space.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformVolumeGaussianFilter.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformVolumeLaplaceFilter.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformVolumeInterpolatorBase.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformVolumeInterpolatorPartialVolume.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformVolumeMorphologicalOperators.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformVolumePainter.cxx.o CMakeFiles/cmtkBase.dir/cmtkVolumeClipping.cxx.o CMakeFiles/cmtkBase.dir/cmtkVolume.cxx.o CMakeFiles/cmtkBase.dir/cmtkVolumeGridToGridLookup.cxx.o CMakeFiles/cmtkBase.dir/cmtkWarpXform.cxx.o CMakeFiles/cmtkBase.dir/cmtkXform.cxx.o CMakeFiles/cmtkBase.dir/cmtkXform_Inverse.cxx.o CMakeFiles/cmtkBase.dir/cmtkXformList.cxx.o CMakeFiles/cmtkBase.dir/cmtkXformListEntry.cxx.o -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../../bin/libcmtkSystem.so ../../bin/libcmtkNumerics.so -lbz2 -lz ../../bin/libcmtkMxml.so -lfftw3_omp -lfftw3 -lfftw3_threads make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 42%] Built target cmtkBase make -f libs/IO/CMakeFiles/cmtkIO.dir/build.make libs/IO/CMakeFiles/cmtkIO.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/libs/IO /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO/CMakeFiles/cmtkIO.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO/CMakeFiles/cmtkIO.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO/CMakeFiles/cmtkIO.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO/CMakeFiles/cmtkIO.dir/depend.internal". Scanning dependencies of target cmtkIO make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f libs/IO/CMakeFiles/cmtkIO.dir/build.make libs/IO/CMakeFiles/cmtkIO.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 42%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkClassStreamStudyList.cxx.o [ 42%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkAffineXformITKIO.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkClassStreamStudyList.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkClassStreamStudyList.cxx [ 42%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkSplineWarpXformITKIO.cxx.o [ 42%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkClassStreamAffineXform.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkAffineXformITKIO.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkAffineXformITKIO.cxx [ 43%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkClassStreamParametricPlane.cxx.o [ 43%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkClassStreamPolynomialXform.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkSplineWarpXformITKIO.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkSplineWarpXformITKIO.cxx cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkClassStreamAffineXform.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkClassStreamAffineXform.cxx cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkClassStreamParametricPlane.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkClassStreamParametricPlane.cxx [ 43%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkPhantomIO_MagphanEMR051.cxx.o [ 43%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkClassStreamWarpXform.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkClassStreamPolynomialXform.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkClassStreamPolynomialXform.cxx [ 43%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkFileFormat.cxx.o [ 43%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkImageOperationMatchIntensities.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkPhantomIO_MagphanEMR051.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkPhantomIO_MagphanEMR051.cxx [ 44%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkGroupwiseRegistrationFunctionalIO.cxx.o [ 44%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkImageOperationApplyMask.cxx.o [ 44%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkImageStackDICOM.cxx.o [ 44%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkImageFileDICOM.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkClassStreamWarpXform.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkClassStreamWarpXform.cxx cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkFileFormat.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkFileFormat.cxx cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkGroupwiseRegistrationFunctionalIO.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkGroupwiseRegistrationFunctionalIO.cxx [ 45%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkLandmarkIO.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkImageFileDICOM.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.cxx cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkImageOperationApplyMask.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageOperationApplyMask.cxx cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkImageOperationMatchIntensities.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageOperationMatchIntensities.cxx cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkImageStackDICOM.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.cxx cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkLandmarkIO.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkLandmarkIO.cxx [ 45%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkLandmarkListIO.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkLandmarkListIO.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkLandmarkListIO.cxx [ 45%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkSegmentationLabelIO.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkSegmentationLabelIO.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkSegmentationLabelIO.cxx [ 45%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkSiemensCSAHeader.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkSiemensCSAHeader.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkSiemensCSAHeader.cxx [ 45%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkStudy.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkStudy.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkStudy.cxx In file included from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.cxx:33: /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:179:8: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] 179 | std::auto_ptr m_Dataset; | ^~~~~~~~ In file included from /usr/include/c++/10/bits/locale_conv.h:41, from /usr/include/c++/10/locale:43, from /usr/include/c++/10/iomanip:43, from /usr/include/dcmtk/ofstd/ofstream.h:35, from /usr/include/dcmtk/ofstd/ofstring.h:59, from /usr/include/dcmtk/oflog/tstring.h:33, from /usr/include/dcmtk/oflog/loglevel.h:36, from /usr/include/dcmtk/oflog/logger.h:34, from /usr/include/dcmtk/oflog/oflog.h:28, from /usr/include/dcmtk/dcmdata/dctypes.h:27, from /usr/include/dcmtk/dcmdata/dctk.h:28, from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:43, from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.cxx:33: /usr/include/c++/10/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.cxx:33: /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:182:8: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] 182 | std::auto_ptr m_Document; | ^~~~~~~~ In file included from /usr/include/c++/10/bits/locale_conv.h:41, from /usr/include/c++/10/locale:43, from /usr/include/c++/10/iomanip:43, from /usr/include/dcmtk/ofstd/ofstream.h:35, from /usr/include/dcmtk/ofstd/ofstring.h:59, from /usr/include/dcmtk/oflog/tstring.h:33, from /usr/include/dcmtk/oflog/loglevel.h:36, from /usr/include/dcmtk/oflog/logger.h:34, from /usr/include/dcmtk/oflog/oflog.h:28, from /usr/include/dcmtk/dcmdata/dctypes.h:27, from /usr/include/dcmtk/dcmdata/dctk.h:28, from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:43, from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.cxx:33: /usr/include/c++/10/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.cxx:33: /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h: In member function 'void cmtk::ImageFileDICOM::ReleaseDocument()': /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:164:29: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] 164 | this->m_Document = std::auto_ptr( NULL ); | ^~~~~~~~ In file included from /usr/include/c++/10/bits/locale_conv.h:41, from /usr/include/c++/10/locale:43, from /usr/include/c++/10/iomanip:43, from /usr/include/dcmtk/ofstd/ofstream.h:35, from /usr/include/dcmtk/ofstd/ofstring.h:59, from /usr/include/dcmtk/oflog/tstring.h:33, from /usr/include/dcmtk/oflog/loglevel.h:36, from /usr/include/dcmtk/oflog/logger.h:34, from /usr/include/dcmtk/oflog/oflog.h:28, from /usr/include/dcmtk/dcmdata/dctypes.h:27, from /usr/include/dcmtk/dcmdata/dctk.h:28, from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:43, from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.cxx:33: /usr/include/c++/10/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.h:38, from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.cxx:33: /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:179:8: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] 179 | std::auto_ptr m_Dataset; | ^~~~~~~~ In file included from /usr/include/c++/10/bits/locale_conv.h:41, from /usr/include/c++/10/locale:43, from /usr/include/c++/10/iomanip:43, from /usr/include/dcmtk/ofstd/ofstream.h:35, from /usr/include/dcmtk/ofstd/ofstring.h:59, from /usr/include/dcmtk/oflog/tstring.h:33, from /usr/include/dcmtk/oflog/loglevel.h:36, from /usr/include/dcmtk/oflog/logger.h:34, from /usr/include/dcmtk/oflog/oflog.h:28, from /usr/include/dcmtk/dcmdata/dctypes.h:27, from /usr/include/dcmtk/dcmdata/dctk.h:28, from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:43, from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.h:38, from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.cxx:33: /usr/include/c++/10/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.h:38, from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.cxx:33: /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:182:8: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] 182 | std::auto_ptr m_Document; | ^~~~~~~~ In file included from /usr/include/c++/10/bits/locale_conv.h:41, from /usr/include/c++/10/locale:43, from /usr/include/c++/10/iomanip:43, from /usr/include/dcmtk/ofstd/ofstream.h:35, from /usr/include/dcmtk/ofstd/ofstring.h:59, from /usr/include/dcmtk/oflog/tstring.h:33, from /usr/include/dcmtk/oflog/loglevel.h:36, from /usr/include/dcmtk/oflog/logger.h:34, from /usr/include/dcmtk/oflog/oflog.h:28, from /usr/include/dcmtk/dcmdata/dctypes.h:27, from /usr/include/dcmtk/dcmdata/dctk.h:28, from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:43, from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.h:38, from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.cxx:33: /usr/include/c++/10/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.h:38, from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.cxx:33: /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h: In member function 'void cmtk::ImageFileDICOM::ReleaseDocument()': /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:164:29: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] 164 | this->m_Document = std::auto_ptr( NULL ); | ^~~~~~~~ In file included from /usr/include/c++/10/bits/locale_conv.h:41, from /usr/include/c++/10/locale:43, from /usr/include/c++/10/iomanip:43, from /usr/include/dcmtk/ofstd/ofstream.h:35, from /usr/include/dcmtk/ofstd/ofstring.h:59, from /usr/include/dcmtk/oflog/tstring.h:33, from /usr/include/dcmtk/oflog/loglevel.h:36, from /usr/include/dcmtk/oflog/logger.h:34, from /usr/include/dcmtk/oflog/oflog.h:28, from /usr/include/dcmtk/dcmdata/dctypes.h:27, from /usr/include/dcmtk/dcmdata/dctk.h:28, from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:43, from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.h:38, from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.cxx:33: /usr/include/c++/10/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.cxx: In constructor 'cmtk::ImageFileDICOM::ImageFileDICOM(const string&)': /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.cxx:155:8: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] 155 | std::auto_ptr fileformat( new DcmFileFormat ); | ^~~~~~~~ In file included from /usr/include/c++/10/bits/locale_conv.h:41, from /usr/include/c++/10/locale:43, from /usr/include/c++/10/iomanip:43, from /usr/include/dcmtk/ofstd/ofstream.h:35, from /usr/include/dcmtk/ofstd/ofstring.h:59, from /usr/include/dcmtk/oflog/tstring.h:33, from /usr/include/dcmtk/oflog/loglevel.h:36, from /usr/include/dcmtk/oflog/logger.h:34, from /usr/include/dcmtk/oflog/oflog.h:28, from /usr/include/dcmtk/dcmdata/dctypes.h:27, from /usr/include/dcmtk/dcmdata/dctk.h:28, from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:43, from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.cxx:33: /usr/include/c++/10/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.cxx:164:26: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] 164 | this->m_Dataset = std::auto_ptr( fileformat->getAndRemoveDataset() ); | ^~~~~~~~ In file included from /usr/include/c++/10/bits/locale_conv.h:41, from /usr/include/c++/10/locale:43, from /usr/include/c++/10/iomanip:43, from /usr/include/dcmtk/ofstd/ofstream.h:35, from /usr/include/dcmtk/ofstd/ofstring.h:59, from /usr/include/dcmtk/oflog/tstring.h:33, from /usr/include/dcmtk/oflog/loglevel.h:36, from /usr/include/dcmtk/oflog/logger.h:34, from /usr/include/dcmtk/oflog/oflog.h:28, from /usr/include/dcmtk/dcmdata/dctypes.h:27, from /usr/include/dcmtk/dcmdata/dctk.h:28, from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:43, from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.cxx:33: /usr/include/c++/10/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.cxx:170:27: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] 170 | this->m_Document = std::auto_ptr( new DiDocument( this->m_Dataset.get(), this->m_Dataset->getOriginalXfer(), CIF_AcrNemaCompatibility ) ); | ^~~~~~~~ In file included from /usr/include/c++/10/bits/locale_conv.h:41, from /usr/include/c++/10/locale:43, from /usr/include/c++/10/iomanip:43, from /usr/include/dcmtk/ofstd/ofstream.h:35, from /usr/include/dcmtk/ofstd/ofstring.h:59, from /usr/include/dcmtk/oflog/tstring.h:33, from /usr/include/dcmtk/oflog/loglevel.h:36, from /usr/include/dcmtk/oflog/logger.h:34, from /usr/include/dcmtk/oflog/oflog.h:28, from /usr/include/dcmtk/dcmdata/dctypes.h:27, from /usr/include/dcmtk/dcmdata/dctk.h:28, from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:43, from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.cxx:33: /usr/include/c++/10/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ [ 46%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkStudyList.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkStudyList.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkStudyList.cxx [ 46%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkTypedStream.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkTypedStream.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkTypedStream.cxx [ 46%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkTypedStreamInput.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkTypedStreamInput.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkTypedStreamInput.cxx [ 46%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkTypedStreamOutput.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkTypedStreamOutput.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkTypedStreamOutput.cxx [ 46%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkTypedStreamStudylist.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkTypedStreamStudylist.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkTypedStreamStudylist.cxx [ 47%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFile.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFile.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFile.cxx [ 47%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileAnalyze.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileAnalyze.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFileAnalyze.cxx [ 47%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileBioRad.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileBioRad.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFileBioRad.cxx [ 47%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileMetaFile.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileMetaFile.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFileMetaFile.cxx [ 47%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileNRRD.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileNRRD.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFileNRRD.cxx [ 48%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileNifti.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileNifti.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFileNifti.cxx [ 48%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileVanderbilt.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileVanderbilt.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFileVanderbilt.cxx /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkTypedStreamOutput.cxx: In member function 'cmtk::TypedStream::Condition cmtk::TypedStreamOutput::WriteIntArray(const char*, const long long int*, int, int)': /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkTypedStreamOutput.cxx:564:25: warning: format '%ld' expects argument of type 'long int', but argument 3 has type 'long long int' [-Wformat=] 564 | fprintf( File, "%ld ", array[i] ); | ~~^ ~~~~~~~~ | | | | long int long long int | %lld [ 48%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromSlices.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromSlices.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromSlices.cxx [ 48%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeIO.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkVolumeIO.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeIO.cxx [ 48%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkXformIO.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkXformIO.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkXformIO.cxx /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFileMetaFile.cxx: In static member function 'static void cmtk::VolumeFromFile::WriteMetaImage(const string&, const cmtk::UniformVolume&)': /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFileMetaFile.cxx:87:33: warning: format '%d' expects argument of type 'int', but argument 3 has type 'long long int' [-Wformat=] 87 | fprintf( outfile, "DimSize = %d %d %d\n", volume.m_Dims[AXIS_X], volume.m_Dims[AXIS_Y], volume.m_Dims[AXIS_Z] ); | ~^ | | | int | %lld /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFileMetaFile.cxx:87:36: warning: format '%d' expects argument of type 'int', but argument 4 has type 'long long int' [-Wformat=] 87 | fprintf( outfile, "DimSize = %d %d %d\n", volume.m_Dims[AXIS_X], volume.m_Dims[AXIS_Y], volume.m_Dims[AXIS_Z] ); | ~^ | | | int | %lld /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFileMetaFile.cxx:87:39: warning: format '%d' expects argument of type 'int', but argument 5 has type 'long long int' [-Wformat=] 87 | fprintf( outfile, "DimSize = %d %d %d\n", volume.m_Dims[AXIS_X], volume.m_Dims[AXIS_Y], volume.m_Dims[AXIS_Z] ); | ~^ | | | int | %lld [ 49%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkXformListIO.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkXformListIO.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkXformListIO.cxx [ 49%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkXformIONifti.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkXformIONifti.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkXformIONifti.cxx [ 49%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkXformIONrrd.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkXformIONrrd.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkXformIONrrd.cxx /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFileVanderbilt.cxx: In static member function 'static const SmartPtr cmtk::VolumeFromFile::ReadVanderbilt(const string&)': /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFileVanderbilt.cxx:58:10: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 58 | fgets( line, 96, fp ); | ~~~~~^~~~~~~~~~~~~~~~ [ 49%] Building C object libs/IO/CMakeFiles/cmtkIO.dir/nifti1_io_math.c.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/cmtkIO.dir/nifti1_io_math.c.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/nifti1_io_math.c [ 49%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkDICOM.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkDICOM.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkDICOM.cxx [ 50%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromStudy.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromStudy.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromStudy.cxx [ 50%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileDICOM.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileDICOM.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFileDICOM.cxx [ 50%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkSQLite.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkSQLite.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkSQLite.cxx In file included from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkDICOM.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkDICOM.h:137:8: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] 137 | std::auto_ptr m_Document; | ^~~~~~~~ In file included from /usr/include/c++/10/bits/locale_conv.h:41, from /usr/include/c++/10/locale:43, from /usr/include/c++/10/iomanip:43, from /usr/include/dcmtk/ofstd/ofstream.h:35, from /usr/include/dcmtk/dcmdata/dctagkey.h:27, from /usr/include/dcmtk/dcmdata/dcdeftag.h:18, from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkDICOM.h:40, from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkDICOM.cxx:35: /usr/include/c++/10/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkDICOM.cxx: In member function 'void cmtk::DICOM::InitFromFile(const string&)': /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkDICOM.cxx:112:8: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] 112 | std::auto_ptr fileformat( new DcmFileFormat ); | ^~~~~~~~ In file included from /usr/include/c++/10/bits/locale_conv.h:41, from /usr/include/c++/10/locale:43, from /usr/include/c++/10/iomanip:43, from /usr/include/dcmtk/ofstd/ofstream.h:35, from /usr/include/dcmtk/dcmdata/dctagkey.h:27, from /usr/include/dcmtk/dcmdata/dcdeftag.h:18, from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkDICOM.h:40, from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkDICOM.cxx:35: /usr/include/c++/10/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkDICOM.cxx:133:27: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] 133 | this->m_Document = std::auto_ptr( new DiDocument( this->m_Dataset, this->m_Dataset->getOriginalXfer(), CIF_AcrNemaCompatibility ) ); | ^~~~~~~~ In file included from /usr/include/c++/10/bits/locale_conv.h:41, from /usr/include/c++/10/locale:43, from /usr/include/c++/10/iomanip:43, from /usr/include/dcmtk/ofstd/ofstream.h:35, from /usr/include/dcmtk/dcmdata/dctagkey.h:27, from /usr/include/dcmtk/dcmdata/dcdeftag.h:18, from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkDICOM.h:40, from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkDICOM.cxx:35: /usr/include/c++/10/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFileDICOM.cxx:37: /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkDICOM.h:137:8: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] 137 | std::auto_ptr m_Document; | ^~~~~~~~ In file included from /usr/include/c++/10/bits/locale_conv.h:41, from /usr/include/c++/10/locale:43, from /usr/include/c++/10/iomanip:43, from /usr/include/dcmtk/ofstd/ofstream.h:35, from /usr/include/dcmtk/dcmdata/dctagkey.h:27, from /usr/include/dcmtk/dcmdata/dcdeftag.h:18, from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkDICOM.h:40, from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFileDICOM.cxx:37: /usr/include/c++/10/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromStudy.cxx:43: /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkDICOM.h:137:8: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] 137 | std::auto_ptr m_Document; | ^~~~~~~~ In file included from /usr/include/c++/10/bits/locale_conv.h:41, from /usr/include/c++/10/locale:43, from /usr/include/c++/10/iomanip:43, from /usr/include/dcmtk/ofstd/ofstream.h:35, from /usr/include/dcmtk/dcmdata/dctagkey.h:27, from /usr/include/dcmtk/dcmdata/dcdeftag.h:18, from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkDICOM.h:40, from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromStudy.cxx:43: /usr/include/c++/10/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ [ 50%] Linking CXX shared library ../../bin/libcmtkIO.so cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO && /usr/bin/cmake -E cmake_link_script CMakeFiles/cmtkIO.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -shared -Wl,-soname,libcmtkIO.so -o ../../bin/libcmtkIO.so CMakeFiles/cmtkIO.dir/cmtkAffineXformITKIO.cxx.o CMakeFiles/cmtkIO.dir/cmtkSplineWarpXformITKIO.cxx.o CMakeFiles/cmtkIO.dir/cmtkClassStreamAffineXform.cxx.o CMakeFiles/cmtkIO.dir/cmtkClassStreamParametricPlane.cxx.o CMakeFiles/cmtkIO.dir/cmtkClassStreamPolynomialXform.cxx.o CMakeFiles/cmtkIO.dir/cmtkClassStreamStudyList.cxx.o CMakeFiles/cmtkIO.dir/cmtkClassStreamWarpXform.cxx.o CMakeFiles/cmtkIO.dir/cmtkFileFormat.cxx.o CMakeFiles/cmtkIO.dir/cmtkGroupwiseRegistrationFunctionalIO.cxx.o CMakeFiles/cmtkIO.dir/cmtkImageFileDICOM.cxx.o CMakeFiles/cmtkIO.dir/cmtkImageOperationApplyMask.cxx.o CMakeFiles/cmtkIO.dir/cmtkImageOperationMatchIntensities.cxx.o CMakeFiles/cmtkIO.dir/cmtkImageStackDICOM.cxx.o CMakeFiles/cmtkIO.dir/cmtkLandmarkIO.cxx.o CMakeFiles/cmtkIO.dir/cmtkLandmarkListIO.cxx.o CMakeFiles/cmtkIO.dir/cmtkPhantomIO_MagphanEMR051.cxx.o CMakeFiles/cmtkIO.dir/cmtkSegmentationLabelIO.cxx.o CMakeFiles/cmtkIO.dir/cmtkSiemensCSAHeader.cxx.o CMakeFiles/cmtkIO.dir/cmtkStudy.cxx.o CMakeFiles/cmtkIO.dir/cmtkStudyList.cxx.o CMakeFiles/cmtkIO.dir/cmtkTypedStream.cxx.o CMakeFiles/cmtkIO.dir/cmtkTypedStreamInput.cxx.o CMakeFiles/cmtkIO.dir/cmtkTypedStreamOutput.cxx.o CMakeFiles/cmtkIO.dir/cmtkTypedStreamStudylist.cxx.o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFile.cxx.o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileAnalyze.cxx.o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileBioRad.cxx.o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileMetaFile.cxx.o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileNRRD.cxx.o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileNifti.cxx.o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileVanderbilt.cxx.o CMakeFiles/cmtkIO.dir/cmtkVolumeFromSlices.cxx.o CMakeFiles/cmtkIO.dir/cmtkVolumeIO.cxx.o CMakeFiles/cmtkIO.dir/cmtkXformIO.cxx.o CMakeFiles/cmtkIO.dir/cmtkXformListIO.cxx.o CMakeFiles/cmtkIO.dir/cmtkXformIONifti.cxx.o CMakeFiles/cmtkIO.dir/cmtkXformIONrrd.cxx.o CMakeFiles/cmtkIO.dir/nifti1_io_math.c.o CMakeFiles/cmtkIO.dir/cmtkDICOM.cxx.o CMakeFiles/cmtkIO.dir/cmtkVolumeFromStudy.cxx.o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileDICOM.cxx.o CMakeFiles/cmtkIO.dir/cmtkSQLite.cxx.o -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../../bin/libcmtkBase.so ../../bin/libcmtkSystem.so ../../bin/libcmtkNumerics.so ../../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 ../../bin/libcmtkMxml.so -lfftw3_omp -lfftw3 -lfftw3_threads -lz make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 50%] Built target cmtkIO make -f libs/Registration/CMakeFiles/cmtkRegistration.dir/build.make libs/Registration/CMakeFiles/cmtkRegistration.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/libs/Registration /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration/CMakeFiles/cmtkRegistration.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration/CMakeFiles/cmtkRegistration.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration/CMakeFiles/cmtkRegistration.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration/CMakeFiles/cmtkRegistration.dir/depend.internal". Scanning dependencies of target cmtkRegistration make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f libs/Registration/CMakeFiles/cmtkRegistration.dir/build.make libs/Registration/CMakeFiles/cmtkRegistration.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 51%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkAffineRegistrationCommandLine.cxx.o [ 51%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkAffineRegistration.cxx.o [ 51%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkBestDirectionOptimizer.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkAffineRegistrationCommandLine.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkAffineRegistrationCommandLine.cxx [ 51%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkBestNeighbourOptimizer.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkAffineRegistration.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkAffineRegistration.cxx cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkBestDirectionOptimizer.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkBestDirectionOptimizer.cxx [ 51%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkCongealingFunctional.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkBestNeighbourOptimizer.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkBestNeighbourOptimizer.cxx [ 52%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkEchoPlanarUnwarpFunctional.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkCongealingFunctional.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkCongealingFunctional.cxx [ 52%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkElasticRegistrationCommandLine.cxx.o [ 52%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkElasticRegistration.cxx.o [ 52%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalAffineInitializer.cxx.o [ 52%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate_SplineWarp_IO.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkEchoPlanarUnwarpFunctional.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkEchoPlanarUnwarpFunctional.cxx cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkElasticRegistrationCommandLine.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkElasticRegistrationCommandLine.cxx [ 52%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalBase.cxx.o [ 53%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalAffineInitializer.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkGroupwiseRegistrationFunctionalAffineInitializer.cxx [ 53%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate_Affine_IO.cxx.o [ 53%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate_SplineWarp.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkElasticRegistration.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkElasticRegistration.cxx [ 54%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationOutput.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalBase.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkGroupwiseRegistrationFunctionalBase.cxx cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkGroupwiseRegistrationFunctionalXformTemplate.cxx cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate_Affine_IO.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkGroupwiseRegistrationFunctionalXformTemplate_Affine_IO.cxx cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate_SplineWarp.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkGroupwiseRegistrationFunctionalXformTemplate_SplineWarp.cxx [ 54%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplateBase.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate_SplineWarp_IO.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkGroupwiseRegistrationFunctionalXformTemplate_SplineWarp_IO.cxx cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationOutput.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkGroupwiseRegistrationOutput.cxx cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplateBase.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkGroupwiseRegistrationFunctionalXformTemplateBase.cxx [ 54%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationRMIFunctional.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationRMIFunctional.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkGroupwiseRegistrationRMIFunctional.cxx In file included from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelRegistration.h:52, from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkAffineRegistration.h:38, from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkAffineRegistration.cxx:33: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelRegistration.h:52, from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkElasticRegistration.h:38, from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkElasticRegistration.cxx:33: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelRegistration.h:52, from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkElasticRegistration.h:38, from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkElasticRegistrationCommandLine.h:38, from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkElasticRegistrationCommandLine.cxx:33: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelRegistration.h:52, from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkAffineRegistration.h:38, from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkAffineRegistrationCommandLine.h:38, from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkAffineRegistrationCommandLine.cxx:33: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 54%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkHausdorffDistance.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkHausdorffDistance.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkHausdorffDistance.cxx [ 54%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistration.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistration.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairRegistration.cxx [ 54%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistrationFunctional.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistrationFunctional.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairRegistrationFunctional.cxx [ 55%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistrationImagePreprocessor.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistrationImagePreprocessor.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairRegistrationImagePreprocessor.cxx [ 55%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairAffineRegistration.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairAffineRegistration.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairAffineRegistration.cxx [ 55%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairAffineRegistrationCommandLine.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairAffineRegistrationCommandLine.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairAffineRegistrationCommandLine.cxx In file included from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairRegistration.h:39, from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairRegistration.cxx:33: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairRegistration.h:39, from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairRegistrationImagePreprocessor.cxx:33: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 55%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairAffineRegistrationFunctional.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairAffineRegistrationFunctional.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairAffineRegistrationFunctional.cxx [ 55%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairNonrigidRegistration.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairNonrigidRegistration.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairNonrigidRegistration.cxx [ 56%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairNonrigidRegistrationCommandLine.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairNonrigidRegistrationCommandLine.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairNonrigidRegistrationCommandLine.cxx [ 56%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairNonrigidRegistrationFunctional.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairNonrigidRegistrationFunctional.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairNonrigidRegistrationFunctional.cxx [ 56%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityJointHistogram.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityJointHistogram.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairSimilarityJointHistogram.cxx [ 56%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasure.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasure.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairSimilarityMeasure.cxx In file included from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairRegistration.h:39, from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairAffineRegistration.h:41, from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairAffineRegistration.cxx:33: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairRegistration.h:39, from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairAffineRegistration.h:41, from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairAffineRegistrationCommandLine.h:38, from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairAffineRegistrationCommandLine.cxx:33: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 56%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureCR.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureCR.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairSimilarityMeasureCR.cxx In file included from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairRegistration.h:39, from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairNonrigidRegistration.h:40, from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairNonrigidRegistration.cxx:33: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 57%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureMSD.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureMSD.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairSimilarityMeasureMSD.cxx [ 57%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureNCC.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureNCC.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairSimilarityMeasureNCC.cxx [ 57%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureRMS.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureRMS.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairSimilarityMeasureRMS.cxx In file included from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairRegistration.h:39, from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairNonrigidRegistration.h:40, from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairNonrigidRegistrationCommandLine.h:38, from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairNonrigidRegistrationCommandLine.cxx:33: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 57%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSymmetricAffineRegistrationFunctional.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSymmetricAffineRegistrationFunctional.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairSymmetricAffineRegistrationFunctional.cxx [ 57%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSymmetricNonrigidRegistrationFunctional.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSymmetricNonrigidRegistrationFunctional.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairSymmetricNonrigidRegistrationFunctional.cxx [ 58%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImageSymmetryPlaneCommandLineBase.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImageSymmetryPlaneCommandLineBase.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImageSymmetryPlaneCommandLineBase.cxx [ 58%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImageSymmetryPlaneFunctional.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImageSymmetryPlaneFunctional.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImageSymmetryPlaneFunctional.cxx [ 58%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImageSymmetryPlaneFunctionalBase.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImageSymmetryPlaneFunctionalBase.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImageSymmetryPlaneFunctionalBase.cxx [ 58%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkMakeInitialAffineTransformation.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkMakeInitialAffineTransformation.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkMakeInitialAffineTransformation.cxx [ 58%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkMultiChannelRegistrationFunctionalBase.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkMultiChannelRegistrationFunctionalBase.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkMultiChannelRegistrationFunctionalBase.cxx [ 59%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkProtocolCallback.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkProtocolCallback.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkProtocolCallback.cxx [ 59%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkReformatVolume.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkReformatVolume.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkReformatVolume.cxx In file included from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImageSymmetryPlaneCommandLineBase.h:43, from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImageSymmetryPlaneCommandLineBase.cxx:33: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 59%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkRegistrationCallback.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkRegistrationCallback.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkRegistrationCallback.cxx [ 59%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkRegistrationJointHistogram.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkRegistrationJointHistogram.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkRegistrationJointHistogram.cxx [ 59%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkSplineWarpCongealingFunctional.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkSplineWarpCongealingFunctional.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkSplineWarpCongealingFunctional.cxx [ 59%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkSplineWarpCongealingFunctionalStaticThreadStorage.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkSplineWarpCongealingFunctionalStaticThreadStorage.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkSplineWarpCongealingFunctionalStaticThreadStorage.cxx [ 60%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkSplineWarpGroupwiseRegistrationRMIFunctional.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkSplineWarpGroupwiseRegistrationRMIFunctional.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkSplineWarpGroupwiseRegistrationRMIFunctional.cxx [ 60%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkSymmetricElasticFunctional.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkSymmetricElasticFunctional.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkSymmetricElasticFunctional.cxx [ 60%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkSymmetryPlaneFunctional.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkSymmetryPlaneFunctional.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkSymmetryPlaneFunctional.cxx [ 60%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkTypedArraySimilarity.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkTypedArraySimilarity.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkTypedArraySimilarity.cxx [ 60%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkTypedArraySimilarityMemory.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkTypedArraySimilarityMemory.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkTypedArraySimilarityMemory.cxx [ 61%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkTypedArraySimilarityRMI.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkTypedArraySimilarityRMI.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkTypedArraySimilarityRMI.cxx [ 61%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingAffineFunctional.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingAffineFunctional.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelMatchingAffineFunctional.cxx [ 61%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingCorrRatio.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingCorrRatio.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelMatchingCorrRatio.cxx [ 61%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingCrossCorrelation.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingCrossCorrelation.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelMatchingCrossCorrelation.cxx [ 61%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingElasticFunctional.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingElasticFunctional.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelMatchingElasticFunctional.cxx [ 62%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingFunctional.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingFunctional.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelMatchingFunctional.cxx [ 62%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingMeanSquaredDifference.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingMeanSquaredDifference.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelMatchingMeanSquaredDifference.cxx [ 62%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingMetric.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingMetric.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelMatchingMetric.cxx [ 62%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingMetric_Type.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingMetric_Type.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelMatchingMetric_Type.cxx [ 62%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelRegistration.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkVoxelRegistration.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelRegistration.cxx [ 63%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelRegistrationImagePreprocessor.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkVoxelRegistrationImagePreprocessor.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelRegistrationImagePreprocessor.cxx [ 63%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImageXformDB.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImageXformDB.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImageXformDB.cxx In file included from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelRegistration.h:52, from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelRegistration.cxx:33: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelRegistration.h:52, from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelRegistrationImagePreprocessor.cxx:33: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 63%] Linking CXX shared library ../../bin/libcmtkRegistration.so cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration && /usr/bin/cmake -E cmake_link_script CMakeFiles/cmtkRegistration.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -shared -Wl,-soname,libcmtkRegistration.so -o ../../bin/libcmtkRegistration.so CMakeFiles/cmtkRegistration.dir/cmtkAffineRegistrationCommandLine.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkAffineRegistration.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkBestDirectionOptimizer.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkBestNeighbourOptimizer.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkCongealingFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkEchoPlanarUnwarpFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkElasticRegistrationCommandLine.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkElasticRegistration.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalAffineInitializer.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalBase.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate_Affine_IO.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate_SplineWarp.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate_SplineWarp_IO.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplateBase.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationOutput.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationRMIFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkHausdorffDistance.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistration.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistrationFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistrationImagePreprocessor.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairAffineRegistration.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairAffineRegistrationCommandLine.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairAffineRegistrationFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairNonrigidRegistration.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairNonrigidRegistrationCommandLine.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairNonrigidRegistrationFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityJointHistogram.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasure.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureCR.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureMSD.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureNCC.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureRMS.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSymmetricAffineRegistrationFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSymmetricNonrigidRegistrationFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImageSymmetryPlaneCommandLineBase.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImageSymmetryPlaneFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImageSymmetryPlaneFunctionalBase.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkMakeInitialAffineTransformation.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkMultiChannelRegistrationFunctionalBase.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkProtocolCallback.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkReformatVolume.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkRegistrationCallback.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkRegistrationJointHistogram.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkSplineWarpCongealingFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkSplineWarpCongealingFunctionalStaticThreadStorage.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkSplineWarpGroupwiseRegistrationRMIFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkSymmetricElasticFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkSymmetryPlaneFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkTypedArraySimilarity.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkTypedArraySimilarityMemory.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkTypedArraySimilarityRMI.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingAffineFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingCorrRatio.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingCrossCorrelation.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingElasticFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingMeanSquaredDifference.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingMetric.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingMetric_Type.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkVoxelRegistration.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkVoxelRegistrationImagePreprocessor.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImageXformDB.cxx.o -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../../bin/libcmtkIO.so ../../bin/libcmtkBase.so ../../bin/libcmtkSystem.so ../../bin/libcmtkNumerics.so -lbz2 ../../bin/libcmtkMxml.so -lfftw3_omp -lfftw3 -lfftw3_threads ../../bin/libNrrdIO.so -lz -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 63%] Built target cmtkRegistration make -f libs/Recon/CMakeFiles/cmtkRecon.dir/build.make libs/Recon/CMakeFiles/cmtkRecon.dir/depend make -f libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/build.make libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/libs/Recon /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Recon /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Recon/CMakeFiles/cmtkRecon.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/libs/Segmentation /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Segmentation /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Recon/CMakeFiles/cmtkRecon.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Recon/CMakeFiles/cmtkRecon.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Recon/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Recon/CMakeFiles/cmtkRecon.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Segmentation/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/depend.internal". Scanning dependencies of target cmtkRecon make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f libs/Recon/CMakeFiles/cmtkRecon.dir/build.make libs/Recon/CMakeFiles/cmtkRecon.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 63%] Building CXX object libs/Recon/CMakeFiles/cmtkRecon.dir/cmtkVolumeInjectionReconstruction.cxx.o [ 63%] Building CXX object libs/Recon/CMakeFiles/cmtkRecon.dir/cmtkInverseInterpolationVolumeReconstructionBase.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Recon && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRecon_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRecon.dir/cmtkInverseInterpolationVolumeReconstructionBase.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Recon/cmtkInverseInterpolationVolumeReconstructionBase.cxx cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Recon && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRecon_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRecon.dir/cmtkVolumeInjectionReconstruction.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Recon/cmtkVolumeInjectionReconstruction.cxx Scanning dependencies of target cmtkSegmentation make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/build.make libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 63%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalBinaryShapeBasedAveraging.cxx.o [ 63%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalVoting.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalBinaryShapeBasedAveraging.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLabelCombinationLocalBinaryShapeBasedAveraging.cxx cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalVoting.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLabelCombinationLocalVoting.cxx [ 63%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkAtlasSegmentation.cxx.o [ 63%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkEntropyMinimizationIntensityCorrectionFunctionalBase.cxx.o [ 64%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkEntropyMinimizationIntensityCorrectionFunctional.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkAtlasSegmentation.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkAtlasSegmentation.cxx cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkEntropyMinimizationIntensityCorrectionFunctionalBase.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkEntropyMinimizationIntensityCorrectionFunctionalBase.cxx [ 64%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalShapeBasedAveraging.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkEntropyMinimizationIntensityCorrectionFunctional.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkEntropyMinimizationIntensityCorrectionFunctional.cxx [ 64%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalWeighting.cxx.o [ 65%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationMultiClassSTAPLE.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalShapeBasedAveraging.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLabelCombinationLocalShapeBasedAveraging.cxx [ 65%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationSTAPLE.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalWeighting.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLabelCombinationLocalWeighting.cxx [ 65%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationVoting.cxx.o [ 65%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationShapeBasedAveraging.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationMultiClassSTAPLE.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLabelCombinationMultiClassSTAPLE.cxx cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationVoting.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLabelCombinationVoting.cxx cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationSTAPLE.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLabelCombinationSTAPLE.cxx [ 66%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLeastSquaresPolynomialIntensityBiasField.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationShapeBasedAveraging.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLabelCombinationShapeBasedAveraging.cxx [ 66%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationShapeBasedAveragingInterpolation.cxx.o [ 66%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkOverlapMeasures.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkLeastSquaresPolynomialIntensityBiasField.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLeastSquaresPolynomialIntensityBiasField.cxx cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationShapeBasedAveragingInterpolation.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLabelCombinationShapeBasedAveragingInterpolation.cxx cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkOverlapMeasures.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkOverlapMeasures.cxx [ 66%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkSimpleLevelset.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkSimpleLevelset.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkSimpleLevelset.cxx In file included from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelRegistration.h:52, from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkAffineRegistration.h:38, from /build/cmtk-3.3.1p1+dfsg/libs/Recon/cmtkVolumeInjectionReconstruction.h:40, from /build/cmtk-3.3.1p1+dfsg/libs/Recon/cmtkInverseInterpolationVolumeReconstructionBase.h:40, from /build/cmtk-3.3.1p1+dfsg/libs/Recon/cmtkInverseInterpolationVolumeReconstructionBase.cxx:37: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 66%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkSimpleLevelsetCommandLineBase.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkSimpleLevelsetCommandLineBase.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkSimpleLevelsetCommandLineBase.cxx In file included from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelRegistration.h:52, from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkAffineRegistration.h:38, from /build/cmtk-3.3.1p1+dfsg/libs/Recon/cmtkVolumeInjectionReconstruction.h:40, from /build/cmtk-3.3.1p1+dfsg/libs/Recon/cmtkVolumeInjectionReconstruction.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelRegistration.h:52, from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkAffineRegistration.h:38, from /build/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkAtlasSegmentation.cxx:36: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 66%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkDetectPhantomMagphanEMR051.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkDetectPhantomMagphanEMR051.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkDetectPhantomMagphanEMR051.cxx [ 67%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkSphereDetectionBipolarMatchedFilterFFT.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkSphereDetectionBipolarMatchedFilterFFT.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkSphereDetectionBipolarMatchedFilterFFT.cxx [ 67%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkSphereDetectionNormalizedBipolarMatchedFilterFFT.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkSphereDetectionNormalizedBipolarMatchedFilterFFT.cxx.o -c /build/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkSphereDetectionNormalizedBipolarMatchedFilterFFT.cxx In file included from /build/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkSimpleLevelsetCommandLineBase.h:40, from /build/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkSimpleLevelsetCommandLineBase.cxx:33: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 67%] Linking CXX shared library ../../bin/libcmtkRecon.so cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Recon && /usr/bin/cmake -E cmake_link_script CMakeFiles/cmtkRecon.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -shared -Wl,-soname,libcmtkRecon.so -o ../../bin/libcmtkRecon.so CMakeFiles/cmtkRecon.dir/cmtkInverseInterpolationVolumeReconstructionBase.cxx.o CMakeFiles/cmtkRecon.dir/cmtkVolumeInjectionReconstruction.cxx.o -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../../bin/libcmtkRegistration.so ../../bin/libcmtkIO.so ../../bin/libcmtkBase.so ../../bin/libcmtkSystem.so -lbz2 ../../bin/libcmtkMxml.so -lfftw3_omp -lfftw3 -lfftw3_threads ../../bin/libcmtkNumerics.so ../../bin/libNrrdIO.so -lz -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 67%] Built target cmtkRecon [ 67%] Linking CXX shared library ../../bin/libcmtkSegmentation.so cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Segmentation && /usr/bin/cmake -E cmake_link_script CMakeFiles/cmtkSegmentation.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -shared -Wl,-soname,libcmtkSegmentation.so -o ../../bin/libcmtkSegmentation.so CMakeFiles/cmtkSegmentation.dir/cmtkAtlasSegmentation.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkEntropyMinimizationIntensityCorrectionFunctionalBase.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkEntropyMinimizationIntensityCorrectionFunctional.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalBinaryShapeBasedAveraging.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalShapeBasedAveraging.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalVoting.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalWeighting.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationMultiClassSTAPLE.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationSTAPLE.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationVoting.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationShapeBasedAveraging.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationShapeBasedAveragingInterpolation.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkLeastSquaresPolynomialIntensityBiasField.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkOverlapMeasures.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkSimpleLevelset.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkSimpleLevelsetCommandLineBase.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkDetectPhantomMagphanEMR051.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkSphereDetectionBipolarMatchedFilterFFT.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkSphereDetectionNormalizedBipolarMatchedFilterFFT.cxx.o -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../../bin/libcmtkRegistration.so -lfftw3_omp -lfftw3 -lfftw3_threads ../../bin/libcmtkIO.so ../../bin/libcmtkBase.so ../../bin/libcmtkSystem.so -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads ../../bin/libcmtkMxml.so ../../bin/libcmtkNumerics.so ../../bin/libNrrdIO.so -lz -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 67%] Built target cmtkSegmentation make -f apps/CMakeFiles/detect_spheres_matched_filter.dir/build.make apps/CMakeFiles/detect_spheres_matched_filter.dir/depend make -f apps/CMakeFiles/dcm2image.dir/build.make apps/CMakeFiles/dcm2image.dir/depend make -f apps/CMakeFiles/asegment_sri24.dir/build.make apps/CMakeFiles/asegment_sri24.dir/depend make -f apps/CMakeFiles/dbtool.dir/build.make apps/CMakeFiles/dbtool.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/detect_spheres_matched_filter.dir/DependInfo.cmake --color= make -f apps/CMakeFiles/warp.dir/build.make apps/CMakeFiles/warp.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/dcm2image.dir/DependInfo.cmake --color= make -f apps/CMakeFiles/volume_reconstruction.dir/build.make apps/CMakeFiles/volume_reconstruction.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/asegment_sri24.dir/DependInfo.cmake --color= make -f apps/CMakeFiles/volume_injection.dir/build.make apps/CMakeFiles/volume_injection.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/dbtool.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/warp.dir/DependInfo.cmake --color= make -f apps/CMakeFiles/unwarp_image_phantom.dir/build.make apps/CMakeFiles/unwarp_image_phantom.dir/depend make -f apps/CMakeFiles/ttest.dir/build.make apps/CMakeFiles/ttest.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/volume_reconstruction.dir/DependInfo.cmake --color= make -f apps/CMakeFiles/sympl.dir/build.make apps/CMakeFiles/sympl.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/volume_injection.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/unwarp_image_phantom.dir/DependInfo.cmake --color= make -f apps/CMakeFiles/streamxform.dir/build.make apps/CMakeFiles/streamxform.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/ttest.dir/DependInfo.cmake --color= make -f apps/CMakeFiles/stream_pixels.dir/build.make apps/CMakeFiles/stream_pixels.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/sympl.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/streamxform.dir/DependInfo.cmake --color= make -f apps/CMakeFiles/xform2scalar.dir/build.make apps/CMakeFiles/xform2scalar.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/stream_pixels.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/xform2scalar.dir/DependInfo.cmake --color= make -f apps/CMakeFiles/filter.dir/build.make apps/CMakeFiles/filter.dir/depend make -f apps/CMakeFiles/asegment.dir/build.make apps/CMakeFiles/asegment.dir/depend Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/volume_reconstruction.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/volume_reconstruction.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/volume_reconstruction.dir/depend.internal". make -f apps/CMakeFiles/fit_spline_xform.dir/build.make apps/CMakeFiles/fit_spline_xform.dir/depend Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/dbtool.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/dbtool.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/dbtool.dir/depend.internal". make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/filter.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/volume_injection.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/volume_injection.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/volume_injection.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/dcm2image.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/dcm2image.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/dcm2image.dir/depend.internal". make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/asegment.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/detect_spheres_matched_filter.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/detect_spheres_matched_filter.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/detect_spheres_matched_filter.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/asegment_sri24.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/asegment_sri24.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/asegment_sri24.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/sympl.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/sympl.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/sympl.dir/depend.internal". make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/fit_spline_xform.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/warp.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/warp.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/warp.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/unwarp_image_phantom.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/unwarp_image_phantom.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/unwarp_image_phantom.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/stream_pixels.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/stream_pixels.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/stream_pixels.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/ttest.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/ttest.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/ttest.dir/depend.internal". Scanning dependencies of target dbtool Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/streamxform.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/streamxform.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/streamxform.dir/depend.internal". make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/dbtool.dir/build.make apps/CMakeFiles/dbtool.dir/build Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/xform2scalar.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/xform2scalar.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/xform2scalar.dir/depend.internal". make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' Scanning dependencies of target stream_pixels Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/filter.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/filter.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/filter.dir/depend.internal". Scanning dependencies of target sympl make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/asegment.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/asegment.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/asegment.dir/depend.internal". make -f apps/CMakeFiles/stream_pixels.dir/build.make apps/CMakeFiles/stream_pixels.dir/build make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' Scanning dependencies of target dcm2image Scanning dependencies of target detect_spheres_matched_filter make -f apps/CMakeFiles/sympl.dir/build.make apps/CMakeFiles/sympl.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' Scanning dependencies of target volume_reconstruction make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/dcm2image.dir/build.make apps/CMakeFiles/dcm2image.dir/build make -f apps/CMakeFiles/detect_spheres_matched_filter.dir/build.make apps/CMakeFiles/detect_spheres_matched_filter.dir/build Scanning dependencies of target asegment_sri24 make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/volume_reconstruction.dir/build.make apps/CMakeFiles/volume_reconstruction.dir/build make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/asegment_sri24.dir/build.make apps/CMakeFiles/asegment_sri24.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' Scanning dependencies of target volume_injection Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/fit_spline_xform.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/fit_spline_xform.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/fit_spline_xform.dir/depend.internal". Scanning dependencies of target ttest Scanning dependencies of target unwarp_image_phantom make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' Scanning dependencies of target streamxform make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' Scanning dependencies of target warp make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/ttest.dir/build.make apps/CMakeFiles/ttest.dir/build make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/volume_injection.dir/build.make apps/CMakeFiles/volume_injection.dir/build make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/unwarp_image_phantom.dir/build.make apps/CMakeFiles/unwarp_image_phantom.dir/build [ 68%] Building CXX object apps/CMakeFiles/dbtool.dir/dbtool.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/dbtool.dir/dbtool.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/dbtool.cxx make -f apps/CMakeFiles/streamxform.dir/build.make apps/CMakeFiles/streamxform.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/warp.dir/build.make apps/CMakeFiles/warp.dir/build Scanning dependencies of target xform2scalar make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/xform2scalar.dir/build.make apps/CMakeFiles/xform2scalar.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 68%] Building CXX object apps/CMakeFiles/stream_pixels.dir/stream_pixels.cxx.o make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' Scanning dependencies of target asegment [ 69%] Building CXX object apps/CMakeFiles/detect_spheres_matched_filter.dir/detect_spheres_matched_filter.cxx.o Scanning dependencies of target filter cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/stream_pixels.dir/stream_pixels.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/stream_pixels.cxx make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/asegment.dir/build.make apps/CMakeFiles/asegment.dir/build cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/detect_spheres_matched_filter.dir/detect_spheres_matched_filter.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/detect_spheres_matched_filter.cxx make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/filter.dir/build.make apps/CMakeFiles/filter.dir/build [ 69%] Building CXX object apps/CMakeFiles/dcm2image.dir/dcm2image.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/dcm2image.dir/dcm2image.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/dcm2image.cxx make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 70%] Building CXX object apps/CMakeFiles/volume_reconstruction.dir/volume_reconstruction.cxx.o make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 70%] Building CXX object apps/CMakeFiles/sympl.dir/sympl.cxx.o [ 70%] Building CXX object apps/CMakeFiles/asegment_sri24.dir/asegment_sri24.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/sympl.dir/sympl.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/sympl.cxx Scanning dependencies of target fit_spline_xform cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/asegment_sri24.dir/asegment_sri24.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/asegment_sri24.cxx cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/volume_reconstruction.dir/volume_reconstruction.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/volume_reconstruction.cxx [ 70%] Building CXX object apps/CMakeFiles/volume_injection.dir/volume_injection.cxx.o make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/fit_spline_xform.dir/build.make apps/CMakeFiles/fit_spline_xform.dir/build cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/volume_injection.dir/volume_injection.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/volume_injection.cxx [ 71%] Building CXX object apps/CMakeFiles/ttest.dir/ttest.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/ttest.dir/ttest.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/ttest.cxx [ 71%] Building CXX object apps/CMakeFiles/unwarp_image_phantom.dir/unwarp_image_phantom.cxx.o [ 71%] Building CXX object apps/CMakeFiles/warp.dir/warp.cxx.o make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/warp.dir/warp.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/warp.cxx cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/unwarp_image_phantom.dir/unwarp_image_phantom.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/unwarp_image_phantom.cxx [ 71%] Building CXX object apps/CMakeFiles/streamxform.dir/streamxform.cxx.o [ 71%] Building CXX object apps/CMakeFiles/xform2scalar.dir/xform2scalar.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/streamxform.dir/streamxform.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/streamxform.cxx cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/xform2scalar.dir/xform2scalar.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/xform2scalar.cxx [ 71%] Building CXX object apps/CMakeFiles/asegment.dir/asegment.cxx.o [ 71%] Building CXX object apps/CMakeFiles/filter.dir/filter.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/asegment.dir/asegment.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/asegment.cxx cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/filter.dir/filter.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/filter.cxx [ 71%] Building CXX object apps/CMakeFiles/fit_spline_xform.dir/fit_spline_xform.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/fit_spline_xform.dir/fit_spline_xform.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/fit_spline_xform.cxx In file included from /build/cmtk-3.3.1p1+dfsg/apps/dbtool.cxx:33: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/apps/volume_injection.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/apps/stream_pixels.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/apps/ttest.cxx:37: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/apps/asegment_sri24.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/apps/detect_spheres_matched_filter.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/apps/xform2scalar.cxx:36: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/apps/sympl.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/apps/volume_reconstruction.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/apps/unwarp_image_phantom.cxx:36: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/apps/streamxform.cxx:37: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/apps/fit_spline_xform.cxx:36: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/apps/asegment.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/apps/filter.cxx:36: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/apps/dcm2image.cxx:39: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelRegistration.h:52, from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkElasticRegistration.h:38, from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkElasticRegistrationCommandLine.h:38, from /build/cmtk-3.3.1p1+dfsg/apps/warp.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/apps/dcm2image.cxx:45: /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:179:8: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] 179 | std::auto_ptr m_Dataset; | ^~~~~~~~ In file included from /usr/include/c++/10/bits/locale_conv.h:41, from /usr/include/c++/10/locale:43, from /usr/include/c++/10/iomanip:43, from /usr/include/dcmtk/ofstd/ofstream.h:35, from /usr/include/dcmtk/ofstd/ofstring.h:59, from /usr/include/dcmtk/oflog/tstring.h:33, from /usr/include/dcmtk/oflog/loglevel.h:36, from /usr/include/dcmtk/oflog/logger.h:34, from /usr/include/dcmtk/oflog/oflog.h:28, from /usr/include/dcmtk/dcmdata/dctypes.h:27, from /usr/include/dcmtk/dcmdata/dctk.h:28, from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:43, from /build/cmtk-3.3.1p1+dfsg/apps/dcm2image.cxx:45: /usr/include/c++/10/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/apps/dcm2image.cxx:45: /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:182:8: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] 182 | std::auto_ptr m_Document; | ^~~~~~~~ In file included from /usr/include/c++/10/bits/locale_conv.h:41, from /usr/include/c++/10/locale:43, from /usr/include/c++/10/iomanip:43, from /usr/include/dcmtk/ofstd/ofstream.h:35, from /usr/include/dcmtk/ofstd/ofstring.h:59, from /usr/include/dcmtk/oflog/tstring.h:33, from /usr/include/dcmtk/oflog/loglevel.h:36, from /usr/include/dcmtk/oflog/logger.h:34, from /usr/include/dcmtk/oflog/oflog.h:28, from /usr/include/dcmtk/dcmdata/dctypes.h:27, from /usr/include/dcmtk/dcmdata/dctk.h:28, from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:43, from /build/cmtk-3.3.1p1+dfsg/apps/dcm2image.cxx:45: /usr/include/c++/10/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/apps/dcm2image.cxx:45: /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h: In member function 'void cmtk::ImageFileDICOM::ReleaseDocument()': /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:164:29: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] 164 | this->m_Document = std::auto_ptr( NULL ); | ^~~~~~~~ In file included from /usr/include/c++/10/bits/locale_conv.h:41, from /usr/include/c++/10/locale:43, from /usr/include/c++/10/iomanip:43, from /usr/include/dcmtk/ofstd/ofstream.h:35, from /usr/include/dcmtk/ofstd/ofstring.h:59, from /usr/include/dcmtk/oflog/tstring.h:33, from /usr/include/dcmtk/oflog/loglevel.h:36, from /usr/include/dcmtk/oflog/logger.h:34, from /usr/include/dcmtk/oflog/oflog.h:28, from /usr/include/dcmtk/dcmdata/dctypes.h:27, from /usr/include/dcmtk/dcmdata/dctk.h:28, from /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:43, from /build/cmtk-3.3.1p1+dfsg/apps/dcm2image.cxx:45: /usr/include/c++/10/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ [ 72%] Linking CXX executable ../bin/warp cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/warp.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/warp.dir/warp.cxx.o -o ../bin/warp -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 72%] Built target warp make -f apps/CMakeFiles/fit_affine_dfield.dir/build.make apps/CMakeFiles/fit_affine_dfield.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/fit_affine_dfield.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/fit_affine_dfield.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/fit_affine_dfield.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/fit_affine_dfield.dir/depend.internal". Scanning dependencies of target fit_affine_dfield make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/fit_affine_dfield.dir/build.make apps/CMakeFiles/fit_affine_dfield.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 72%] Building CXX object apps/CMakeFiles/fit_affine_dfield.dir/fit_affine_dfield.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/fit_affine_dfield.dir/fit_affine_dfield.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/fit_affine_dfield.cxx [ 72%] Linking CXX executable ../bin/dbtool cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/dbtool.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/dbtool.dir/dbtool.cxx.o -o ../bin/dbtool -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 72%] Built target dbtool make -f apps/CMakeFiles/fibxform.dir/build.make apps/CMakeFiles/fibxform.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/fibxform.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/fibxform.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/fibxform.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/fibxform.dir/depend.internal". Scanning dependencies of target fibxform make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/fibxform.dir/build.make apps/CMakeFiles/fibxform.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 73%] Building CXX object apps/CMakeFiles/fibxform.dir/fibxform.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/fibxform.dir/fibxform.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/fibxform.cxx In file included from /build/cmtk-3.3.1p1+dfsg/apps/fit_affine_dfield.cxx:36: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/apps/fibxform.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 73%] Linking CXX executable ../bin/asegment [ 73%] Linking CXX executable ../bin/stream_pixels cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/asegment.dir/link.txt --verbose=1 cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/stream_pixels.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/asegment.dir/asegment.cxx.o -o ../bin/asegment -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/stream_pixels.dir/stream_pixels.cxx.o -o ../bin/stream_pixels -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 73%] Built target asegment make -f apps/CMakeFiles/groupwise_affine.dir/build.make apps/CMakeFiles/groupwise_affine.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/groupwise_affine.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/groupwise_affine.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/groupwise_affine.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/groupwise_affine.dir/depend.internal". Scanning dependencies of target groupwise_affine make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/groupwise_affine.dir/build.make apps/CMakeFiles/groupwise_affine.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 73%] Building CXX object apps/CMakeFiles/groupwise_affine.dir/groupwise_affine.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/groupwise_affine.dir/groupwise_affine.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/groupwise_affine.cxx make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 73%] Built target stream_pixels make -f apps/CMakeFiles/dwi_mask_bad_slices.dir/build.make apps/CMakeFiles/dwi_mask_bad_slices.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/dwi_mask_bad_slices.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/dwi_mask_bad_slices.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/dwi_mask_bad_slices.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/dwi_mask_bad_slices.dir/depend.internal". Scanning dependencies of target dwi_mask_bad_slices make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/dwi_mask_bad_slices.dir/build.make apps/CMakeFiles/dwi_mask_bad_slices.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 73%] Building CXX object apps/CMakeFiles/dwi_mask_bad_slices.dir/dwi_mask_bad_slices.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/dwi_mask_bad_slices.dir/dwi_mask_bad_slices.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/dwi_mask_bad_slices.cxx [ 73%] Linking CXX executable ../bin/detect_spheres_matched_filter cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/detect_spheres_matched_filter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/detect_spheres_matched_filter.dir/detect_spheres_matched_filter.cxx.o -o ../bin/detect_spheres_matched_filter -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so [ 73%] Linking CXX executable ../bin/asegment_sri24 cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/asegment_sri24.dir/link.txt --verbose=1 In file included from /build/cmtk-3.3.1p1+dfsg/apps/groupwise_affine.cxx:39: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/asegment_sri24.dir/asegment_sri24.cxx.o -o ../bin/asegment_sri24 -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 73%] Built target detect_spheres_matched_filter make -f apps/CMakeFiles/film.dir/build.make apps/CMakeFiles/film.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/film.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/film.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/film.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/film.dir/depend.internal". Scanning dependencies of target film make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/film.dir/build.make apps/CMakeFiles/film.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 73%] Building CXX object apps/CMakeFiles/film.dir/film.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/film.dir/film.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/film.cxx make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 73%] Built target asegment_sri24 make -f apps/CMakeFiles/destripe.dir/build.make apps/CMakeFiles/destripe.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/destripe.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/destripe.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/destripe.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/destripe.dir/depend.internal". Scanning dependencies of target destripe make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/destripe.dir/build.make apps/CMakeFiles/destripe.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 73%] Building CXX object apps/CMakeFiles/destripe.dir/destripe.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/destripe.dir/destripe.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/destripe.cxx [ 74%] Linking CXX executable ../bin/filter [ 74%] Linking CXX executable ../bin/fit_affine_dfield cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/filter.dir/link.txt --verbose=1 cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/fit_affine_dfield.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/filter.dir/filter.cxx.o -o ../bin/filter -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/fit_affine_dfield.dir/fit_affine_dfield.cxx.o -o ../bin/fit_affine_dfield -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so In file included from /build/cmtk-3.3.1p1+dfsg/apps/dwi_mask_bad_slices.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 74%] Built target fit_affine_dfield make -f apps/CMakeFiles/mcaffine.dir/build.make apps/CMakeFiles/mcaffine.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/mcaffine.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/mcaffine.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/mcaffine.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/mcaffine.dir/depend.internal". Scanning dependencies of target mcaffine make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/mcaffine.dir/build.make apps/CMakeFiles/mcaffine.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 74%] Building CXX object apps/CMakeFiles/mcaffine.dir/mcaffine.cxx.o [ 74%] Built target filter cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/mcaffine.dir/mcaffine.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/mcaffine.cxx make -f apps/CMakeFiles/sba.dir/build.make apps/CMakeFiles/sba.dir/depend [ 75%] Linking CXX executable ../bin/xform2scalar cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/xform2scalar.dir/link.txt --verbose=1 make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/sba.dir/DependInfo.cmake --color= /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/xform2scalar.dir/xform2scalar.cxx.o -o ../bin/xform2scalar -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/sba.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/sba.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/sba.dir/depend.internal". Scanning dependencies of target sba make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/sba.dir/build.make apps/CMakeFiles/sba.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 76%] Building CXX object apps/CMakeFiles/sba.dir/sba.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/sba.dir/sba.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/sba.cxx make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 76%] Built target xform2scalar make -f apps/CMakeFiles/dof2mat.dir/build.make apps/CMakeFiles/dof2mat.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/dof2mat.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/dof2mat.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/dof2mat.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/dof2mat.dir/depend.internal". Scanning dependencies of target dof2mat make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/dof2mat.dir/build.make apps/CMakeFiles/dof2mat.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 76%] Building CXX object apps/CMakeFiles/dof2mat.dir/dof2mat.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/dof2mat.dir/dof2mat.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/dof2mat.cxx In file included from /build/cmtk-3.3.1p1+dfsg/apps/film.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 76%] Linking CXX executable ../bin/ttest cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/ttest.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/ttest.dir/ttest.cxx.o -o ../bin/ttest -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so In file included from /build/cmtk-3.3.1p1+dfsg/apps/destripe.cxx:33: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 76%] Linking CXX executable ../bin/fit_spline_xform cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/fit_spline_xform.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/fit_spline_xform.dir/fit_spline_xform.cxx.o -o ../bin/fit_spline_xform -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so [ 77%] Linking CXX executable ../bin/streamxform cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/streamxform.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/streamxform.dir/streamxform.cxx.o -o ../bin/streamxform -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so [ 77%] Linking CXX executable ../bin/volume_injection cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/volume_injection.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/volume_injection.dir/volume_injection.cxx.o -o ../bin/volume_injection -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so [ 77%] Built target ttest make -f apps/CMakeFiles/histogram.dir/build.make apps/CMakeFiles/histogram.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/histogram.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/histogram.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/histogram.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/histogram.dir/depend.internal". Scanning dependencies of target histogram make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/histogram.dir/build.make apps/CMakeFiles/histogram.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' In file included from /build/cmtk-3.3.1p1+dfsg/apps/sba.cxx:37: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 77%] Building CXX object apps/CMakeFiles/histogram.dir/histogram.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/histogram.dir/histogram.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/histogram.cxx make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' In file included from /build/cmtk-3.3.1p1+dfsg/apps/mcaffine.cxx:37: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 77%] Built target streamxform make -f apps/CMakeFiles/groupwise_init.dir/build.make apps/CMakeFiles/groupwise_init.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/groupwise_init.dir/DependInfo.cmake --color= [ 77%] Built target fit_spline_xform make -f apps/CMakeFiles/mk_phantom_3d.dir/build.make apps/CMakeFiles/mk_phantom_3d.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/mk_phantom_3d.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/groupwise_init.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/groupwise_init.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/groupwise_init.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/mk_phantom_3d.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/mk_phantom_3d.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/mk_phantom_3d.dir/depend.internal". Scanning dependencies of target groupwise_init make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/groupwise_init.dir/build.make apps/CMakeFiles/groupwise_init.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' Scanning dependencies of target mk_phantom_3d make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/mk_phantom_3d.dir/build.make apps/CMakeFiles/mk_phantom_3d.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 78%] Building CXX object apps/CMakeFiles/groupwise_init.dir/groupwise_init.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/groupwise_init.dir/groupwise_init.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/groupwise_init.cxx [ 78%] Building CXX object apps/CMakeFiles/mk_phantom_3d.dir/mk_phantom_3d.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/mk_phantom_3d.dir/mk_phantom_3d.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/mk_phantom_3d.cxx make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 78%] Built target volume_injection make -f apps/CMakeFiles/glm.dir/build.make apps/CMakeFiles/glm.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/glm.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/glm.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/glm.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/glm.dir/depend.internal". Scanning dependencies of target glm make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/glm.dir/build.make apps/CMakeFiles/glm.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 78%] Building CXX object apps/CMakeFiles/glm.dir/glm.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/glm.dir/glm.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/glm.cxx In file included from /build/cmtk-3.3.1p1+dfsg/apps/dof2mat.cxx:36: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/apps/histogram.cxx:37: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/apps/groupwise_init.cxx:39: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/apps/mk_phantom_3d.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/apps/glm.cxx:37: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 79%] Linking CXX executable ../bin/unwarp_image_phantom cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/unwarp_image_phantom.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/unwarp_image_phantom.dir/unwarp_image_phantom.cxx.o -o ../bin/unwarp_image_phantom -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 79%] Built target unwarp_image_phantom make -f apps/CMakeFiles/avg_adm.dir/build.make apps/CMakeFiles/avg_adm.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/avg_adm.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/avg_adm.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/avg_adm.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/avg_adm.dir/depend.internal". Scanning dependencies of target avg_adm make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/avg_adm.dir/build.make apps/CMakeFiles/avg_adm.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 79%] Building CXX object apps/CMakeFiles/avg_adm.dir/avg_adm.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/avg_adm.dir/avg_adm.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/avg_adm.cxx [ 79%] Linking CXX executable ../bin/fibxform cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/fibxform.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/fibxform.dir/fibxform.cxx.o -o ../bin/fibxform -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so /build/cmtk-3.3.1p1+dfsg/apps/mk_phantom_3d.cxx: In function 'int doMain(int, const char**)': /build/cmtk-3.3.1p1+dfsg/apps/mk_phantom_3d.cxx:192:7: warning: 'template class std::auto_ptr' is deprecated [-Wdeprecated-declarations] 192 | std::auto_ptr fileformat( new DcmFileFormat ); | ^~~~~~~~ In file included from /usr/include/c++/10/memory:83, from /build/cmtk-3.3.1p1+dfsg/apps/mk_phantom_3d.cxx:46: /usr/include/c++/10/bits/unique_ptr.h:57:28: note: declared here 57 | template class auto_ptr; | ^~~~~~~~ [ 79%] Linking CXX executable ../bin/dof2mat cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/dof2mat.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/dof2mat.dir/dof2mat.cxx.o -o ../bin/dof2mat -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 79%] Built target fibxform make -f apps/CMakeFiles/lsba.dir/build.make apps/CMakeFiles/lsba.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/lsba.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/lsba.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/lsba.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/lsba.dir/depend.internal". Scanning dependencies of target lsba make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/lsba.dir/build.make apps/CMakeFiles/lsba.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 79%] Building CXX object apps/CMakeFiles/lsba.dir/lsba.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/lsba.dir/lsba.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/lsba.cxx make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 79%] Built target dof2mat make -f apps/CMakeFiles/pxsearch.dir/build.make apps/CMakeFiles/pxsearch.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/pxsearch.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/pxsearch.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/pxsearch.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/pxsearch.dir/depend.internal". Scanning dependencies of target pxsearch make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/pxsearch.dir/build.make apps/CMakeFiles/pxsearch.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 79%] Building CXX object apps/CMakeFiles/pxsearch.dir/pxsearch.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/pxsearch.dir/pxsearch.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/pxsearch.cxx In file included from /build/cmtk-3.3.1p1+dfsg/apps/avg_adm.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 79%] Linking CXX executable ../bin/sympl cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/sympl.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/sympl.dir/sympl.cxx.o -o ../bin/sympl -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so In file included from /build/cmtk-3.3.1p1+dfsg/apps/lsba.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/apps/pxsearch.cxx:37: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 79%] Linking CXX executable ../bin/dcm2image cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/dcm2image.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/dcm2image.dir/dcm2image.cxx.o -o ../bin/dcm2image -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 79%] Built target sympl make -f apps/CMakeFiles/split.dir/build.make apps/CMakeFiles/split.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/split.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/split.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/split.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/split.dir/depend.internal". Scanning dependencies of target split make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/split.dir/build.make apps/CMakeFiles/split.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 79%] Building CXX object apps/CMakeFiles/split.dir/split.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/split.dir/split.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/split.cxx make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 79%] Built target dcm2image make -f apps/CMakeFiles/gmm.dir/build.make apps/CMakeFiles/gmm.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/gmm.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/gmm.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/gmm.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/gmm.dir/depend.internal". Scanning dependencies of target gmm make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/gmm.dir/build.make apps/CMakeFiles/gmm.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 79%] Building CXX object apps/CMakeFiles/gmm.dir/gmm.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/gmm.dir/gmm.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/gmm.cxx [ 80%] Linking CXX executable ../bin/dwi_mask_bad_slices cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/dwi_mask_bad_slices.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/dwi_mask_bad_slices.dir/dwi_mask_bad_slices.cxx.o -o ../bin/dwi_mask_bad_slices -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so In file included from /build/cmtk-3.3.1p1+dfsg/apps/split.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 80%] Built target dwi_mask_bad_slices make -f apps/CMakeFiles/vtkxform.dir/build.make apps/CMakeFiles/vtkxform.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/vtkxform.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/vtkxform.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/vtkxform.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/vtkxform.dir/depend.internal". In file included from /build/cmtk-3.3.1p1+dfsg/apps/gmm.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ Scanning dependencies of target vtkxform make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/vtkxform.dir/build.make apps/CMakeFiles/vtkxform.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 80%] Building CXX object apps/CMakeFiles/vtkxform.dir/vtkxform.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/vtkxform.dir/vtkxform.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/vtkxform.cxx [ 80%] Linking CXX executable ../bin/sba cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/sba.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/sba.dir/sba.cxx.o -o ../bin/sba -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so In file included from /build/cmtk-3.3.1p1+dfsg/apps/vtkxform.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 80%] Linking CXX executable ../bin/destripe cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/destripe.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/destripe.dir/destripe.cxx.o -o ../bin/destripe -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 80%] Built target sba make -f apps/CMakeFiles/fit_affine_xform.dir/build.make apps/CMakeFiles/fit_affine_xform.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/fit_affine_xform.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/fit_affine_xform.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/fit_affine_xform.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/fit_affine_xform.dir/depend.internal". Scanning dependencies of target fit_affine_xform make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/fit_affine_xform.dir/build.make apps/CMakeFiles/fit_affine_xform.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 80%] Building CXX object apps/CMakeFiles/fit_affine_xform.dir/fit_affine_xform.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/fit_affine_xform.dir/fit_affine_xform.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/fit_affine_xform.cxx make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 80%] Built target destripe make -f apps/CMakeFiles/detect_adni_phantom.dir/build.make apps/CMakeFiles/detect_adni_phantom.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/detect_adni_phantom.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/detect_adni_phantom.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/detect_adni_phantom.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/detect_adni_phantom.dir/depend.internal". Scanning dependencies of target detect_adni_phantom make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/detect_adni_phantom.dir/build.make apps/CMakeFiles/detect_adni_phantom.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 80%] Building CXX object apps/CMakeFiles/detect_adni_phantom.dir/detect_adni_phantom.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/detect_adni_phantom.dir/detect_adni_phantom.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/detect_adni_phantom.cxx /build/cmtk-3.3.1p1+dfsg/apps/vtkxform.cxx: In function 'int doMain(int, const char**)': /build/cmtk-3.3.1p1+dfsg/apps/vtkxform.cxx:190:47: warning: narrowing conversion of 'xyz.cmtk::FixedVector<3, double>::.cmtk::FixedArray<3, double>::operator[](0)' from 'double' to 'float' [-Wnarrowing] 190 | float xyzFloat[3] = { xyz[0], xyz[1], xyz[2] }; | ^ /build/cmtk-3.3.1p1+dfsg/apps/vtkxform.cxx:190:47: warning: narrowing conversion of 'xyz.cmtk::FixedVector<3, double>::.cmtk::FixedArray<3, double>::operator[](1)' from 'double' to 'float' [-Wnarrowing] /build/cmtk-3.3.1p1+dfsg/apps/vtkxform.cxx:190:47: warning: narrowing conversion of 'xyz.cmtk::FixedVector<3, double>::.cmtk::FixedArray<3, double>::operator[](2)' from 'double' to 'float' [-Wnarrowing] [ 80%] Linking CXX executable ../bin/mk_phantom_3d cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/mk_phantom_3d.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/mk_phantom_3d.dir/mk_phantom_3d.cxx.o -o ../bin/mk_phantom_3d -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 80%] Built target mk_phantom_3d make -f apps/CMakeFiles/average_images.dir/build.make apps/CMakeFiles/average_images.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/average_images.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/average_images.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/average_images.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/average_images.dir/depend.internal". Scanning dependencies of target average_images make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/average_images.dir/build.make apps/CMakeFiles/average_images.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 80%] Building CXX object apps/CMakeFiles/average_images.dir/average_images.cxx.o In file included from /build/cmtk-3.3.1p1+dfsg/apps/fit_affine_xform.cxx:36: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/average_images.dir/average_images.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/average_images.cxx [ 80%] Linking CXX executable ../bin/groupwise_init cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/groupwise_init.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/groupwise_init.dir/groupwise_init.cxx.o -o ../bin/groupwise_init -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so In file included from /build/cmtk-3.3.1p1+dfsg/apps/detect_adni_phantom.cxx:36: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 80%] Built target groupwise_init make -f apps/CMakeFiles/geomatch.dir/build.make apps/CMakeFiles/geomatch.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/geomatch.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/geomatch.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/geomatch.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/geomatch.dir/depend.internal". Scanning dependencies of target geomatch make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/geomatch.dir/build.make apps/CMakeFiles/geomatch.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 81%] Building CXX object apps/CMakeFiles/geomatch.dir/geomatch.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/geomatch.dir/geomatch.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/geomatch.cxx [ 81%] Linking CXX executable ../bin/pxsearch cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/pxsearch.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/pxsearch.dir/pxsearch.cxx.o -o ../bin/pxsearch -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so In file included from /build/cmtk-3.3.1p1+dfsg/apps/average_images.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 81%] Built target pxsearch make -f apps/CMakeFiles/vol2csv.dir/build.make apps/CMakeFiles/vol2csv.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/vol2csv.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/vol2csv.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/vol2csv.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/vol2csv.dir/depend.internal". Scanning dependencies of target vol2csv make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/vol2csv.dir/build.make apps/CMakeFiles/vol2csv.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 81%] Building CXX object apps/CMakeFiles/vol2csv.dir/vol2csv.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/vol2csv.dir/vol2csv.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/vol2csv.cxx [ 81%] Linking CXX executable ../bin/histogram cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/histogram.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/histogram.dir/histogram.cxx.o -o ../bin/histogram -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so [ 81%] Linking CXX executable ../bin/glm cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/glm.dir/link.txt --verbose=1 In file included from /build/cmtk-3.3.1p1+dfsg/apps/geomatch.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/glm.dir/glm.cxx.o -o ../bin/glm -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 81%] Built target histogram make -f apps/CMakeFiles/imagemath.dir/build.make apps/CMakeFiles/imagemath.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/imagemath.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/imagemath.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/imagemath.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/imagemath.dir/depend.internal". Scanning dependencies of target imagemath make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/imagemath.dir/build.make apps/CMakeFiles/imagemath.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 81%] Building CXX object apps/CMakeFiles/imagemath.dir/imagemath.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/imagemath.dir/imagemath.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/imagemath.cxx make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 81%] Built target glm make -f apps/CMakeFiles/groupwise_warp.dir/build.make apps/CMakeFiles/groupwise_warp.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/groupwise_warp.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/groupwise_warp.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/groupwise_warp.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/groupwise_warp.dir/depend.internal". Scanning dependencies of target groupwise_warp make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/groupwise_warp.dir/build.make apps/CMakeFiles/groupwise_warp.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 81%] Linking CXX executable ../bin/lsba cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/lsba.dir/link.txt --verbose=1 [ 81%] Building CXX object apps/CMakeFiles/groupwise_warp.dir/groupwise_warp.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/groupwise_warp.dir/groupwise_warp.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/groupwise_warp.cxx /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/lsba.dir/lsba.cxx.o -o ../bin/lsba -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so [ 81%] Linking CXX executable ../bin/groupwise_affine cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/groupwise_affine.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/groupwise_affine.dir/groupwise_affine.cxx.o -o ../bin/groupwise_affine -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' In file included from /build/cmtk-3.3.1p1+dfsg/apps/vol2csv.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 81%] Linking CXX executable ../bin/volume_reconstruction cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/volume_reconstruction.dir/link.txt --verbose=1 [ 81%] Built target lsba make -f apps/CMakeFiles/lvote.dir/build.make apps/CMakeFiles/lvote.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/lvote.dir/DependInfo.cmake --color= /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/volume_reconstruction.dir/volume_reconstruction.cxx.o -o ../bin/volume_reconstruction -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/lvote.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/lvote.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/lvote.dir/depend.internal". Scanning dependencies of target lvote make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/lvote.dir/build.make apps/CMakeFiles/lvote.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 82%] Building CXX object apps/CMakeFiles/lvote.dir/lvote.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/lvote.dir/lvote.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/lvote.cxx make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 82%] Built target groupwise_affine make -f apps/CMakeFiles/convertx.dir/build.make apps/CMakeFiles/convertx.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/convertx.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/convertx.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/convertx.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/convertx.dir/depend.internal". Scanning dependencies of target convertx make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/convertx.dir/build.make apps/CMakeFiles/convertx.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 82%] Building CXX object apps/CMakeFiles/convertx.dir/convertx.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/convertx.dir/convertx.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/convertx.cxx In file included from /build/cmtk-3.3.1p1+dfsg/apps/imagemath.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 82%] Built target volume_reconstruction make -f apps/CMakeFiles/symplx.dir/build.make apps/CMakeFiles/symplx.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/symplx.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/symplx.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/symplx.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/symplx.dir/depend.internal". Scanning dependencies of target symplx make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/symplx.dir/build.make apps/CMakeFiles/symplx.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 82%] Building CXX object apps/CMakeFiles/symplx.dir/symplx.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/symplx.dir/symplx.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/symplx.cxx In file included from /build/cmtk-3.3.1p1+dfsg/apps/groupwise_warp.cxx:39: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/apps/lvote.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/apps/convertx.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 82%] Linking CXX executable ../bin/vtkxform cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/vtkxform.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/vtkxform.dir/vtkxform.cxx.o -o ../bin/vtkxform -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so [ 82%] Linking CXX executable ../bin/split cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/split.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/split.dir/split.cxx.o -o ../bin/split -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so In file included from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImageSymmetryPlaneCommandLineBase.h:43, from /build/cmtk-3.3.1p1+dfsg/apps/symplx.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 82%] Built target vtkxform make -f apps/CMakeFiles/average_affine.dir/build.make apps/CMakeFiles/average_affine.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/average_affine.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/average_affine.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/average_affine.dir/depend.internal". 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Scanning dependencies of target average_affine make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/average_affine.dir/build.make apps/CMakeFiles/average_affine.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 83%] Building CXX object apps/CMakeFiles/average_affine.dir/average_affine.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/average_affine.dir/average_affine.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/average_affine.cxx make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 83%] Built target split make -f apps/CMakeFiles/mcwarp.dir/build.make apps/CMakeFiles/mcwarp.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/mcwarp.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/mcwarp.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/mcwarp.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/mcwarp.dir/depend.internal". Scanning dependencies of target mcwarp make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/mcwarp.dir/build.make apps/CMakeFiles/mcwarp.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 83%] Building CXX object apps/CMakeFiles/mcwarp.dir/mcwarp.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/mcwarp.dir/mcwarp.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/mcwarp.cxx [ 84%] Linking CXX executable ../bin/gmm cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/gmm.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/gmm.dir/gmm.cxx.o -o ../bin/gmm -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so [ 84%] Linking CXX executable ../bin/symplx cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/symplx.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/symplx.dir/symplx.cxx.o -o ../bin/symplx -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so [ 84%] Linking CXX executable ../bin/fit_affine_xform cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/fit_affine_xform.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/fit_affine_xform.dir/fit_affine_xform.cxx.o -o ../bin/fit_affine_xform -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so [ 84%] Linking CXX executable ../bin/avg_adm cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/avg_adm.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/avg_adm.dir/avg_adm.cxx.o -o ../bin/avg_adm -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so In file included from /build/cmtk-3.3.1p1+dfsg/apps/mcwarp.cxx:37: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 84%] Built target gmm make -f apps/CMakeFiles/average_labels.dir/build.make apps/CMakeFiles/average_labels.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps 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Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/average_labels.dir/depend.internal". Scanning dependencies of target average_labels make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/average_labels.dir/build.make apps/CMakeFiles/average_labels.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 84%] Building CXX object apps/CMakeFiles/average_labels.dir/average_labels.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/average_labels.dir/average_labels.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/average_labels.cxx In file included from /build/cmtk-3.3.1p1+dfsg/apps/average_affine.cxx:36: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 84%] Built target symplx make -f apps/CMakeFiles/convert_warp.dir/build.make apps/CMakeFiles/convert_warp.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/convert_warp.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/convert_warp.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/convert_warp.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/convert_warp.dir/depend.internal". make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' Scanning dependencies of target convert_warp [ 84%] Built target fit_affine_xform make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/convert_warp.dir/build.make apps/CMakeFiles/convert_warp.dir/build make -f apps/CMakeFiles/make_initial_affine.dir/build.make apps/CMakeFiles/make_initial_affine.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/make_initial_affine.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 84%] Building CXX object apps/CMakeFiles/convert_warp.dir/convert_warp.cxx.o Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/make_initial_affine.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/make_initial_affine.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/make_initial_affine.dir/depend.internal". cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/convert_warp.dir/convert_warp.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/convert_warp.cxx make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' Scanning dependencies of target make_initial_affine make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/make_initial_affine.dir/build.make apps/CMakeFiles/make_initial_affine.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 84%] Built target avg_adm make -f apps/CMakeFiles/hausdorff.dir/build.make apps/CMakeFiles/hausdorff.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/hausdorff.dir/DependInfo.cmake --color= [ 84%] Building CXX object apps/CMakeFiles/make_initial_affine.dir/make_initial_affine.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/make_initial_affine.dir/make_initial_affine.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/make_initial_affine.cxx [ 84%] Linking CXX executable ../bin/geomatch cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/geomatch.dir/link.txt --verbose=1 Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/hausdorff.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/hausdorff.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/hausdorff.dir/depend.internal". /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/geomatch.dir/geomatch.cxx.o -o ../bin/geomatch -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so Scanning dependencies of target hausdorff make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/hausdorff.dir/build.make apps/CMakeFiles/hausdorff.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 84%] Building CXX object apps/CMakeFiles/hausdorff.dir/hausdorff.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/hausdorff.dir/hausdorff.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/hausdorff.cxx make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 84%] Built target geomatch make -f apps/CMakeFiles/describe.dir/build.make apps/CMakeFiles/describe.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/describe.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/describe.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/describe.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/describe.dir/depend.internal". Scanning dependencies of target describe make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/describe.dir/build.make apps/CMakeFiles/describe.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 84%] Building CXX object apps/CMakeFiles/describe.dir/describe.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/describe.dir/describe.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/describe.cxx In file included from /build/cmtk-3.3.1p1+dfsg/apps/average_labels.cxx:37: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/apps/hausdorff.cxx:33: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 84%] Linking CXX executable ../bin/film cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/film.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/film.dir/film.cxx.o -o ../bin/film -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so In file included from /build/cmtk-3.3.1p1+dfsg/apps/convert_warp.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/apps/make_initial_affine.cxx:36: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 84%] Built target film make -f apps/CMakeFiles/jidb.dir/build.make apps/CMakeFiles/jidb.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/jidb.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/jidb.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/jidb.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/jidb.dir/depend.internal". [ 84%] Linking CXX executable ../bin/detect_adni_phantom cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/detect_adni_phantom.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/detect_adni_phantom.dir/detect_adni_phantom.cxx.o -o ../bin/detect_adni_phantom -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so Scanning dependencies of target jidb make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/jidb.dir/build.make apps/CMakeFiles/jidb.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 84%] Building CXX object apps/CMakeFiles/jidb.dir/jidb.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/jidb.dir/jidb.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/jidb.cxx In file included from /build/cmtk-3.3.1p1+dfsg/apps/describe.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 84%] Built target detect_adni_phantom make -f apps/CMakeFiles/mk_nifti_hdr.dir/build.make apps/CMakeFiles/mk_nifti_hdr.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/mk_nifti_hdr.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/mk_nifti_hdr.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/mk_nifti_hdr.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/mk_nifti_hdr.dir/depend.internal". Scanning dependencies of target mk_nifti_hdr make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/mk_nifti_hdr.dir/build.make apps/CMakeFiles/mk_nifti_hdr.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 84%] Building CXX object apps/CMakeFiles/mk_nifti_hdr.dir/mk_nifti_hdr.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/mk_nifti_hdr.dir/mk_nifti_hdr.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/mk_nifti_hdr.cxx /build/cmtk-3.3.1p1+dfsg/apps/describe.cxx: In function 'void DescribeImage(const char*)': /build/cmtk-3.3.1p1+dfsg/apps/describe.cxx:88:30: warning: format '%d' expects argument of type 'int', but argument 3 has type 'long long int' [-Wformat=] 88 | fprintf( stdout, "XDIM\t%d\nYDIM\t%d\nZDIM\t%d\n", volume->GetDims()[cmtk::AXIS_X], volume->GetDims()[cmtk::AXIS_Y], volume->GetDims()[cmtk::AXIS_Z] ); | ~^ | | | int | %lld /build/cmtk-3.3.1p1+dfsg/apps/describe.cxx:88:40: warning: format '%d' expects argument of type 'int', but argument 4 has type 'long long int' [-Wformat=] 88 | fprintf( stdout, "XDIM\t%d\nYDIM\t%d\nZDIM\t%d\n", volume->GetDims()[cmtk::AXIS_X], volume->GetDims()[cmtk::AXIS_Y], volume->GetDims()[cmtk::AXIS_Z] ); | ~^ | | | int | %lld /build/cmtk-3.3.1p1+dfsg/apps/describe.cxx:88:50: warning: format '%d' expects argument of type 'int', but argument 5 has type 'long long int' [-Wformat=] 88 | fprintf( stdout, "XDIM\t%d\nYDIM\t%d\nZDIM\t%d\n", volume->GetDims()[cmtk::AXIS_X], volume->GetDims()[cmtk::AXIS_Y], volume->GetDims()[cmtk::AXIS_Z] ); | ~^ | | | int | %lld /build/cmtk-3.3.1p1+dfsg/apps/describe.cxx:124:24: warning: format '%d' expects argument of type 'int', but argument 3 has type 'long long int' [-Wformat=] 124 | fprintf( stdout, "%d x %d x %d voxels\n", volume->GetDims()[cmtk::AXIS_X], volume->GetDims()[cmtk::AXIS_Y], volume->GetDims()[cmtk::AXIS_Z] ); | ~^ | | | int | %lld /build/cmtk-3.3.1p1+dfsg/apps/describe.cxx:124:29: warning: format '%d' expects argument of type 'int', but argument 4 has type 'long long int' [-Wformat=] 124 | fprintf( stdout, "%d x %d x %d voxels\n", volume->GetDims()[cmtk::AXIS_X], volume->GetDims()[cmtk::AXIS_Y], volume->GetDims()[cmtk::AXIS_Z] ); | ~^ | | | int | %lld /build/cmtk-3.3.1p1+dfsg/apps/describe.cxx:124:34: warning: format '%d' expects argument of type 'int', but argument 5 has type 'long long int' [-Wformat=] 124 | fprintf( stdout, "%d x %d x %d voxels\n", volume->GetDims()[cmtk::AXIS_X], volume->GetDims()[cmtk::AXIS_Y], volume->GetDims()[cmtk::AXIS_Z] ); | ~^ | | | int | %lld [ 84%] Linking CXX executable ../bin/mcaffine cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/mcaffine.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/mcaffine.dir/mcaffine.cxx.o -o ../bin/mcaffine -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so In file included from /build/cmtk-3.3.1p1+dfsg/apps/jidb.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 84%] Built target mcaffine make -f apps/CMakeFiles/levelset.dir/build.make apps/CMakeFiles/levelset.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/levelset.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/levelset.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/levelset.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/levelset.dir/depend.internal". Scanning dependencies of target levelset make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/levelset.dir/build.make apps/CMakeFiles/levelset.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 84%] Building CXX object apps/CMakeFiles/levelset.dir/levelset.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/levelset.dir/levelset.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/levelset.cxx In file included from /build/cmtk-3.3.1p1+dfsg/apps/mk_nifti_hdr.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 84%] Linking CXX executable ../bin/average_images cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/average_images.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/average_images.dir/average_images.cxx.o -o ../bin/average_images -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 84%] Built target average_images make -f apps/CMakeFiles/warpx.dir/build.make apps/CMakeFiles/warpx.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/warpx.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/warpx.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/warpx.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/warpx.dir/depend.internal". Scanning dependencies of target warpx make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/warpx.dir/build.make apps/CMakeFiles/warpx.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 84%] Building CXX object apps/CMakeFiles/warpx.dir/warpx.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/warpx.dir/warpx.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/warpx.cxx [ 84%] Linking CXX executable ../bin/vol2csv cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/vol2csv.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/vol2csv.dir/vol2csv.cxx.o -o ../bin/vol2csv -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 84%] Built target vol2csv make -f apps/CMakeFiles/unsplit.dir/build.make apps/CMakeFiles/unsplit.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/unsplit.dir/DependInfo.cmake --color= [ 85%] Linking CXX executable ../bin/hausdorff cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/hausdorff.dir/link.txt --verbose=1 Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/unsplit.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/unsplit.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/unsplit.dir/depend.internal". /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/hausdorff.dir/hausdorff.cxx.o -o ../bin/hausdorff -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so Scanning dependencies of target unsplit make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/unsplit.dir/build.make apps/CMakeFiles/unsplit.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 85%] Building CXX object apps/CMakeFiles/unsplit.dir/unsplit.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/unsplit.dir/unsplit.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/unsplit.cxx [ 85%] Linking CXX executable ../bin/lvote cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/lvote.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/lvote.dir/lvote.cxx.o -o ../bin/lvote -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 85%] Built target hausdorff make -f apps/CMakeFiles/lmsba.dir/build.make apps/CMakeFiles/lmsba.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/lmsba.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/lmsba.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/lmsba.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/lmsba.dir/depend.internal". Scanning dependencies of target lmsba make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/lmsba.dir/build.make apps/CMakeFiles/lmsba.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 85%] Building CXX object apps/CMakeFiles/lmsba.dir/lmsba.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/lmsba.dir/lmsba.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/lmsba.cxx In file included from /build/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkSimpleLevelsetCommandLineBase.h:40, from /build/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkSimpleLevelsetCommandLine.h:41, from /build/cmtk-3.3.1p1+dfsg/apps/levelset.cxx:37: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 85%] Built target lvote make -f apps/CMakeFiles/similarity.dir/build.make apps/CMakeFiles/similarity.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/similarity.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/similarity.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/similarity.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/similarity.dir/depend.internal". Scanning dependencies of target similarity make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/similarity.dir/build.make apps/CMakeFiles/similarity.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 85%] Building CXX object apps/CMakeFiles/similarity.dir/similarity.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/similarity.dir/similarity.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/similarity.cxx [ 85%] Linking CXX executable ../bin/average_affine cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/average_affine.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/average_affine.dir/average_affine.cxx.o -o ../bin/average_affine -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so In file included from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairRegistration.h:39, from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairNonrigidRegistration.h:40, from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairNonrigidRegistrationCommandLine.h:38, from /build/cmtk-3.3.1p1+dfsg/apps/warpx.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' In file included from /build/cmtk-3.3.1p1+dfsg/apps/unsplit.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 85%] Built target average_affine make -f apps/CMakeFiles/sequence.dir/build.make apps/CMakeFiles/sequence.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/sequence.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/sequence.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/sequence.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/sequence.dir/depend.internal". Scanning dependencies of target sequence make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/sequence.dir/build.make apps/CMakeFiles/sequence.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 85%] Building CXX object apps/CMakeFiles/sequence.dir/sequence.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/sequence.dir/sequence.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/sequence.cxx [ 85%] Linking CXX executable ../bin/convert_warp cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/convert_warp.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/convert_warp.dir/convert_warp.cxx.o -o ../bin/convert_warp -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so In file included from /build/cmtk-3.3.1p1+dfsg/apps/lmsba.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/apps/similarity.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 86%] Linking CXX executable ../bin/average_labels cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/average_labels.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/average_labels.dir/average_labels.cxx.o -o ../bin/average_labels -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 86%] Built target convert_warp make -f apps/CMakeFiles/mat2dof.dir/build.make apps/CMakeFiles/mat2dof.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/mat2dof.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/mat2dof.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/mat2dof.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/mat2dof.dir/depend.internal". Scanning dependencies of target mat2dof make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/mat2dof.dir/build.make apps/CMakeFiles/mat2dof.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 86%] Building CXX object apps/CMakeFiles/mat2dof.dir/mat2dof.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/mat2dof.dir/mat2dof.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/mat2dof.cxx [ 87%] Linking CXX executable ../bin/levelset cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/levelset.dir/link.txt --verbose=1 make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 87%] Linking CXX executable ../bin/warpx cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/warpx.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/levelset.dir/levelset.cxx.o -o ../bin/levelset -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so [ 87%] Built target average_labels make -f apps/CMakeFiles/mk_adni_phantom.dir/build.make apps/CMakeFiles/mk_adni_phantom.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/mk_adni_phantom.dir/DependInfo.cmake --color= /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/warpx.dir/warpx.cxx.o -o ../bin/warpx -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/mk_adni_phantom.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/mk_adni_phantom.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/mk_adni_phantom.dir/depend.internal". Scanning dependencies of target mk_adni_phantom make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/mk_adni_phantom.dir/build.make apps/CMakeFiles/mk_adni_phantom.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 88%] Building CXX object apps/CMakeFiles/mk_adni_phantom.dir/mk_adni_phantom.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/mk_adni_phantom.dir/mk_adni_phantom.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/mk_adni_phantom.cxx In file included from /build/cmtk-3.3.1p1+dfsg/apps/sequence.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 88%] Built target warpx make -f apps/CMakeFiles/registrationx.dir/build.make apps/CMakeFiles/registrationx.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/registrationx.dir/DependInfo.cmake --color= [ 88%] Built target levelset make -f apps/CMakeFiles/mk_analyze_hdr.dir/build.make apps/CMakeFiles/mk_analyze_hdr.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/mk_analyze_hdr.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/registrationx.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/registrationx.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/registrationx.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/mk_analyze_hdr.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/mk_analyze_hdr.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/mk_analyze_hdr.dir/depend.internal". [ 88%] Linking CXX executable ../bin/make_initial_affine cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/make_initial_affine.dir/link.txt --verbose=1 Scanning dependencies of target mk_analyze_hdr make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/mk_analyze_hdr.dir/build.make apps/CMakeFiles/mk_analyze_hdr.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' Scanning dependencies of target registrationx /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/make_initial_affine.dir/make_initial_affine.cxx.o -o ../bin/make_initial_affine -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/registrationx.dir/build.make apps/CMakeFiles/registrationx.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 88%] Building CXX object apps/CMakeFiles/mk_analyze_hdr.dir/mk_analyze_hdr.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/mk_analyze_hdr.dir/mk_analyze_hdr.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/mk_analyze_hdr.cxx [ 88%] Building CXX object apps/CMakeFiles/registrationx.dir/registrationx.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/registrationx.dir/registrationx.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/registrationx.cxx In file included from /build/cmtk-3.3.1p1+dfsg/apps/mat2dof.cxx:36: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 88%] Built target make_initial_affine make -f apps/CMakeFiles/fib2image.dir/build.make apps/CMakeFiles/fib2image.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/fib2image.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/fib2image.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/fib2image.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/fib2image.dir/depend.internal". Scanning dependencies of target fib2image make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/fib2image.dir/build.make apps/CMakeFiles/fib2image.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 88%] Building CXX object apps/CMakeFiles/fib2image.dir/fib2image.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/fib2image.dir/fib2image.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/fib2image.cxx [ 88%] Linking CXX executable ../bin/imagemath cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/imagemath.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/imagemath.dir/imagemath.cxx.o -o ../bin/imagemath -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so In file included from /build/cmtk-3.3.1p1+dfsg/apps/mk_adni_phantom.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 89%] Linking CXX executable ../bin/describe cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/describe.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/describe.dir/describe.cxx.o -o ../bin/describe -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 89%] Built target imagemath make -f apps/CMakeFiles/mrbias.dir/build.make apps/CMakeFiles/mrbias.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/mrbias.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/mrbias.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/mrbias.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/mrbias.dir/depend.internal". Scanning dependencies of target mrbias make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/mrbias.dir/build.make apps/CMakeFiles/mrbias.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 89%] Building CXX object apps/CMakeFiles/mrbias.dir/mrbias.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/mrbias.dir/mrbias.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/mrbias.cxx In file included from /build/cmtk-3.3.1p1+dfsg/apps/mk_analyze_hdr.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 89%] Built target describe make -f apps/CMakeFiles/overlap.dir/build.make apps/CMakeFiles/overlap.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/overlap.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/overlap.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/overlap.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/overlap.dir/depend.internal". Scanning dependencies of target overlap make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/overlap.dir/build.make apps/CMakeFiles/overlap.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 90%] Building CXX object apps/CMakeFiles/overlap.dir/overlap.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/overlap.dir/overlap.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/overlap.cxx In file included from /build/cmtk-3.3.1p1+dfsg/apps/fib2image.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairRegistration.h:39, from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairAffineRegistration.h:41, from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairAffineRegistrationCommandLine.h:38, from /build/cmtk-3.3.1p1+dfsg/apps/registrationx.cxx:40: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/apps/mrbias.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 91%] Linking CXX executable ../bin/mk_nifti_hdr cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/mk_nifti_hdr.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/mk_nifti_hdr.dir/mk_nifti_hdr.cxx.o -o ../bin/mk_nifti_hdr -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 91%] Built target mk_nifti_hdr make -f apps/CMakeFiles/xform2dfield.dir/build.make apps/CMakeFiles/xform2dfield.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/xform2dfield.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/xform2dfield.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/xform2dfield.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/xform2dfield.dir/depend.internal". Scanning dependencies of target xform2dfield make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/xform2dfield.dir/build.make apps/CMakeFiles/xform2dfield.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 92%] Building CXX object apps/CMakeFiles/xform2dfield.dir/xform2dfield.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/xform2dfield.dir/xform2dfield.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/xform2dfield.cxx In file included from /build/cmtk-3.3.1p1+dfsg/apps/overlap.cxx:36: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 92%] Linking CXX executable ../bin/groupwise_warp cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/groupwise_warp.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/groupwise_warp.dir/groupwise_warp.cxx.o -o ../bin/groupwise_warp -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so [ 93%] Linking CXX executable ../bin/registrationx cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/registrationx.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/registrationx.dir/registrationx.cxx.o -o ../bin/registrationx -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 93%] Built target registrationx make -f apps/CMakeFiles/concat_affine.dir/build.make apps/CMakeFiles/concat_affine.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/concat_affine.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/concat_affine.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/concat_affine.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/concat_affine.dir/depend.internal". [ 93%] Built target groupwise_warp make -f apps/CMakeFiles/probe.dir/build.make apps/CMakeFiles/probe.dir/depend Scanning dependencies of target concat_affine make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/probe.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/concat_affine.dir/build.make apps/CMakeFiles/concat_affine.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/probe.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/probe.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/probe.dir/depend.internal". [ 93%] Building CXX object apps/CMakeFiles/concat_affine.dir/concat_affine.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/concat_affine.dir/concat_affine.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/concat_affine.cxx Scanning dependencies of target probe make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/probe.dir/build.make apps/CMakeFiles/probe.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 93%] Building CXX object apps/CMakeFiles/probe.dir/probe.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/probe.dir/probe.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/probe.cxx [ 93%] Linking CXX executable ../bin/convertx cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/convertx.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/convertx.dir/convertx.cxx.o -o ../bin/convertx -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so In file included from /build/cmtk-3.3.1p1+dfsg/apps/xform2dfield.cxx:38: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 93%] Built target convertx make -f apps/CMakeFiles/reformatx.dir/build.make apps/CMakeFiles/reformatx.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/reformatx.dir/DependInfo.cmake --color= [ 93%] Linking CXX executable ../bin/unsplit cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/unsplit.dir/link.txt --verbose=1 Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/reformatx.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/reformatx.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/reformatx.dir/depend.internal". /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/unsplit.dir/unsplit.cxx.o -o ../bin/unsplit -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so Scanning dependencies of target reformatx make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/reformatx.dir/build.make apps/CMakeFiles/reformatx.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 94%] Building CXX object apps/CMakeFiles/reformatx.dir/reformatx.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/reformatx.dir/reformatx.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/reformatx.cxx make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' In file included from /build/cmtk-3.3.1p1+dfsg/apps/concat_affine.cxx:36: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 94%] Built target unsplit make -f apps/CMakeFiles/xform2itk.dir/build.make apps/CMakeFiles/xform2itk.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/xform2itk.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/xform2itk.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/xform2itk.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/xform2itk.dir/depend.internal". Scanning dependencies of target xform2itk make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/xform2itk.dir/build.make apps/CMakeFiles/xform2itk.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' In file included from /usr/include/string.h:495, from /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:49, from /build/cmtk-3.3.1p1+dfsg/apps/mk_analyze_hdr.cxx:35: In function 'char* strncpy(char*, const char*, size_t)', inlined from 'void cmtk::FileHeader::StoreFieldString(size_t, const char*, size_t)' at /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkFileHeader.h:74:14, inlined from 'void cmtk::FileHeader::StoreFieldString(size_t, const char*, size_t)' at /build/cmtk-3.3.1p1+dfsg/libs/IO/cmtkFileHeader.h:71:8, inlined from 'int doMain(int, const char**)' at /build/cmtk-3.3.1p1+dfsg/apps/mk_analyze_hdr.cxx:275:28: /usr/include/i386-linux-gnu/bits/string_fortified.h:106:34: warning: 'char* __builtin_strncpy(char*, const char*, unsigned int)' specified bound depends on the length of the source argument [-Wstringop-overflow=] 106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/cmtk-3.3.1p1+dfsg/apps/mk_analyze_hdr.cxx: In function 'int doMain(int, const char**)': /build/cmtk-3.3.1p1+dfsg/apps/mk_analyze_hdr.cxx:275:72: note: length computed here 275 | header.StoreFieldString( 148, Description, std::min( strlen( Description )+1, 80 ) ); | ~~~~~~^~~~~~~~~~~~~~~ [ 94%] Building CXX object apps/CMakeFiles/xform2itk.dir/xform2itk.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/xform2itk.dir/xform2itk.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/xform2itk.cxx In file included from /build/cmtk-3.3.1p1+dfsg/apps/probe.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 94%] Linking CXX executable ../bin/lmsba cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/lmsba.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/lmsba.dir/lmsba.cxx.o -o ../bin/lmsba -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 94%] Built target lmsba make -f apps/CMakeFiles/registration.dir/build.make apps/CMakeFiles/registration.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/registration.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/registration.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/registration.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/registration.dir/depend.internal". In file included from /build/cmtk-3.3.1p1+dfsg/apps/reformatx.cxx:37: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ Scanning dependencies of target registration make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/registration.dir/build.make apps/CMakeFiles/registration.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 94%] Building CXX object apps/CMakeFiles/registration.dir/registration.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/registration.dir/registration.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/registration.cxx In file included from /build/cmtk-3.3.1p1+dfsg/apps/xform2itk.cxx:36: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 95%] Linking CXX executable ../bin/sequence cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/sequence.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/sequence.dir/sequence.cxx.o -o ../bin/sequence -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 95%] Built target sequence make -f apps/CMakeFiles/warp2ps.dir/build.make apps/CMakeFiles/warp2ps.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/warp2ps.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/warp2ps.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/warp2ps.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/warp2ps.dir/depend.internal". Scanning dependencies of target warp2ps make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/warp2ps.dir/build.make apps/CMakeFiles/warp2ps.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 95%] Building CXX object apps/CMakeFiles/warp2ps.dir/warp2ps.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/warp2ps.dir/warp2ps.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/warp2ps.cxx [ 95%] Linking CXX executable ../bin/mk_adni_phantom cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/mk_adni_phantom.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/mk_adni_phantom.dir/mk_adni_phantom.cxx.o -o ../bin/mk_adni_phantom -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' In file included from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelRegistration.h:52, from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkAffineRegistration.h:38, from /build/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkAffineRegistrationCommandLine.h:38, from /build/cmtk-3.3.1p1+dfsg/apps/registration.cxx:40: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 95%] Built target mk_adni_phantom make -f apps/CMakeFiles/fit_spline_dfield.dir/build.make apps/CMakeFiles/fit_spline_dfield.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/fit_spline_dfield.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/fit_spline_dfield.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/fit_spline_dfield.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/fit_spline_dfield.dir/depend.internal". Scanning dependencies of target fit_spline_dfield make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/fit_spline_dfield.dir/build.make apps/CMakeFiles/fit_spline_dfield.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 95%] Building CXX object apps/CMakeFiles/fit_spline_dfield.dir/fit_spline_dfield.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/fit_spline_dfield.dir/fit_spline_dfield.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/fit_spline_dfield.cxx [ 95%] Linking CXX executable ../bin/similarity cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/similarity.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/similarity.dir/similarity.cxx.o -o ../bin/similarity -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so [ 96%] Linking CXX executable ../bin/mat2dof cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/mat2dof.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/mat2dof.dir/mat2dof.cxx.o -o ../bin/mat2dof -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 96%] Linking CXX executable ../bin/fib2image cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/fib2image.dir/link.txt --verbose=1 [ 96%] Built target similarity /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/fib2image.dir/fib2image.cxx.o -o ../bin/fib2image -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make -f apps/CMakeFiles/regress.dir/build.make apps/CMakeFiles/regress.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/regress.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/regress.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/regress.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/regress.dir/depend.internal". [ 96%] Built target mat2dof make -f apps/CMakeFiles/gregxform.dir/build.make apps/CMakeFiles/gregxform.dir/depend Scanning dependencies of target regress make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/gregxform.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/regress.dir/build.make apps/CMakeFiles/regress.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/gregxform.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/gregxform.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/gregxform.dir/depend.internal". [ 96%] Building CXX object apps/CMakeFiles/regress.dir/regress.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/regress.dir/regress.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/regress.cxx Scanning dependencies of target gregxform make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/gregxform.dir/build.make apps/CMakeFiles/gregxform.dir/build [ 96%] Linking CXX executable ../bin/mk_analyze_hdr cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/mk_analyze_hdr.dir/link.txt --verbose=1 make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/mk_analyze_hdr.dir/mk_analyze_hdr.cxx.o -o ../bin/mk_analyze_hdr -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so [ 96%] Building CXX object apps/CMakeFiles/gregxform.dir/gregxform.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/gregxform.dir/gregxform.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/gregxform.cxx In file included from /build/cmtk-3.3.1p1+dfsg/apps/warp2ps.cxx:37: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 96%] Linking CXX executable ../bin/registration cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/registration.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/registration.dir/registration.cxx.o -o ../bin/registration -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so In file included from /build/cmtk-3.3.1p1+dfsg/apps/fit_spline_dfield.cxx:36: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 96%] Built target fib2image make -f apps/CMakeFiles/epiunwarp.dir/build.make apps/CMakeFiles/epiunwarp.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/epiunwarp.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/epiunwarp.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/epiunwarp.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/epiunwarp.dir/depend.internal". make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' Scanning dependencies of target epiunwarp make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/epiunwarp.dir/build.make apps/CMakeFiles/epiunwarp.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 96%] Building CXX object apps/CMakeFiles/epiunwarp.dir/epiunwarp.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/epiunwarp.dir/epiunwarp.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/epiunwarp.cxx [ 96%] Built target mk_analyze_hdr make -f apps/CMakeFiles/sbai.dir/build.make apps/CMakeFiles/sbai.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/sbai.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/sbai.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/sbai.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/sbai.dir/depend.internal". Scanning dependencies of target sbai make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/sbai.dir/build.make apps/CMakeFiles/sbai.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 96%] Building CXX object apps/CMakeFiles/sbai.dir/sbai.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/sbai.dir/sbai.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/sbai.cxx make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 96%] Built target registration make -f apps/CMakeFiles/reorient.dir/build.make apps/CMakeFiles/reorient.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/reorient.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/reorient.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/reorient.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/reorient.dir/depend.internal". Scanning dependencies of target reorient make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/reorient.dir/build.make apps/CMakeFiles/reorient.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 96%] Building CXX object apps/CMakeFiles/reorient.dir/reorient.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/reorient.dir/reorient.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/reorient.cxx [ 96%] Linking CXX executable ../bin/jidb cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/jidb.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/jidb.dir/jidb.cxx.o -o ../bin/jidb -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so In file included from /build/cmtk-3.3.1p1+dfsg/apps/gregxform.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/apps/epiunwarp.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/apps/regress.cxx:37: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 96%] Built target jidb make -f apps/CMakeFiles/fit_affine_xform_landmarks.dir/build.make apps/CMakeFiles/fit_affine_xform_landmarks.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/fit_affine_xform_landmarks.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/fit_affine_xform_landmarks.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/fit_affine_xform_landmarks.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/fit_affine_xform_landmarks.dir/depend.internal". Scanning dependencies of target fit_affine_xform_landmarks make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/fit_affine_xform_landmarks.dir/build.make apps/CMakeFiles/fit_affine_xform_landmarks.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 97%] Building CXX object apps/CMakeFiles/fit_affine_xform_landmarks.dir/fit_affine_xform_landmarks.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/fit_affine_xform_landmarks.dir/fit_affine_xform_landmarks.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/fit_affine_xform_landmarks.cxx In file included from /build/cmtk-3.3.1p1+dfsg/apps/sbai.cxx:37: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 97%] Linking CXX executable ../bin/overlap cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/overlap.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/overlap.dir/overlap.cxx.o -o ../bin/overlap -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 97%] Built target overlap make -f apps/CMakeFiles/interleaved_bad_slices.dir/build.make apps/CMakeFiles/interleaved_bad_slices.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/interleaved_bad_slices.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/interleaved_bad_slices.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/interleaved_bad_slices.dir/depend.internal". Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/interleaved_bad_slices.dir/depend.internal". In file included from /build/cmtk-3.3.1p1+dfsg/apps/reorient.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ Scanning dependencies of target interleaved_bad_slices make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/interleaved_bad_slices.dir/build.make apps/CMakeFiles/interleaved_bad_slices.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 98%] Building CXX object apps/CMakeFiles/interleaved_bad_slices.dir/interleaved_bad_slices.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/interleaved_bad_slices.dir/interleaved_bad_slices.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/interleaved_bad_slices.cxx [ 99%] Linking CXX executable ../bin/concat_affine cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/concat_affine.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/concat_affine.dir/concat_affine.cxx.o -o ../bin/concat_affine -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so /build/cmtk-3.3.1p1+dfsg/apps/gregxform.cxx: In function 'int doMain(int, const char**)': /build/cmtk-3.3.1p1+dfsg/apps/gregxform.cxx:191:12: warning: ignoring return value of 'char* fgets(char*, int, FILE*)' declared with attribute 'warn_unused_result' [-Wunused-result] 191 | fgets( line, 80, infile ); | ~~~~~^~~~~~~~~~~~~~~~~~~~ make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 99%] Built target concat_affine make -f apps/CMakeFiles/statistics.dir/build.make apps/CMakeFiles/statistics.dir/depend make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/statistics.dir/DependInfo.cmake --color= Dependee "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/statistics.dir/DependInfo.cmake" is newer than depender "/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/statistics.dir/depend.internal". 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Scanning dependencies of target statistics make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/statistics.dir/build.make apps/CMakeFiles/statistics.dir/build make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [100%] Building CXX object apps/CMakeFiles/statistics.dir/statistics.cxx.o cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/build/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/build/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/statistics.dir/statistics.cxx.o -c /build/cmtk-3.3.1p1+dfsg/apps/statistics.cxx In file included from /build/cmtk-3.3.1p1+dfsg/apps/fit_affine_xform_landmarks.cxx:37: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/apps/interleaved_bad_slices.cxx:35: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /build/cmtk-3.3.1p1+dfsg/apps/statistics.cxx:37: /build/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [100%] Linking CXX executable ../bin/xform2dfield cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/xform2dfield.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/xform2dfield.dir/xform2dfield.cxx.o -o ../bin/xform2dfield -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so [100%] Linking CXX executable ../bin/xform2itk cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/xform2itk.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/xform2itk.dir/xform2itk.cxx.o -o ../bin/xform2itk -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [100%] Built target xform2dfield [100%] Built target xform2itk [100%] Linking CXX executable ../bin/probe cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/probe.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/probe.dir/probe.cxx.o -o ../bin/probe -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so [100%] Linking CXX executable ../bin/mrbias cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/mrbias.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/mrbias.dir/mrbias.cxx.o -o ../bin/mrbias -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [100%] Built target probe make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [100%] Built target mrbias [100%] Linking CXX executable ../bin/fit_affine_xform_landmarks cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/fit_affine_xform_landmarks.dir/link.txt --verbose=1 [100%] Linking CXX executable ../bin/reorient cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/reorient.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/fit_affine_xform_landmarks.dir/fit_affine_xform_landmarks.cxx.o -o ../bin/fit_affine_xform_landmarks -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/reorient.dir/reorient.cxx.o -o ../bin/reorient -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so [100%] Linking CXX executable ../bin/fit_spline_dfield cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/fit_spline_dfield.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/fit_spline_dfield.dir/fit_spline_dfield.cxx.o -o ../bin/fit_spline_dfield -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [100%] Built target reorient make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [100%] Built target fit_affine_xform_landmarks make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [100%] Built target fit_spline_dfield [100%] Linking CXX executable ../bin/gregxform cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/gregxform.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/gregxform.dir/gregxform.cxx.o -o ../bin/gregxform -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [100%] Built target gregxform [100%] Linking CXX executable ../bin/warp2ps cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/warp2ps.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/warp2ps.dir/warp2ps.cxx.o -o ../bin/warp2ps -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so [100%] Linking CXX executable ../bin/interleaved_bad_slices cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/interleaved_bad_slices.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/interleaved_bad_slices.dir/interleaved_bad_slices.cxx.o -o ../bin/interleaved_bad_slices -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [100%] Built target warp2ps make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [100%] Built target interleaved_bad_slices [100%] Linking CXX executable ../bin/regress cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/regress.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/regress.dir/regress.cxx.o -o ../bin/regress -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so [100%] Linking CXX executable ../bin/sbai cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/sbai.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/sbai.dir/sbai.cxx.o -o ../bin/sbai -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [100%] Built target regress [100%] Linking CXX executable ../bin/epiunwarp cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/epiunwarp.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/epiunwarp.dir/epiunwarp.cxx.o -o ../bin/epiunwarp -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [100%] Built target sbai make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [100%] Built target epiunwarp [100%] Linking CXX executable ../bin/statistics cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/statistics.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/statistics.dir/statistics.cxx.o -o ../bin/statistics -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [100%] Built target statistics [100%] Linking CXX executable ../bin/mcwarp cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/mcwarp.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/mcwarp.dir/mcwarp.cxx.o -o ../bin/mcwarp -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [100%] Built target mcwarp [100%] Linking CXX executable ../bin/reformatx cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/reformatx.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/reformatx.dir/reformatx.cxx.o -o ../bin/reformatx -L/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu -Wl,-rpath,/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu:/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [100%] Built target reformatx make[2]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_start /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/CMakeFiles 0 make[1]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' rm -f debian/cmtk.debhelper.log debian/rules override_dh_auto_test make[1]: Entering directory '/build/cmtk-3.3.1p1+dfsg' ARGS=--verbose xvfb-run --auto-servernum --server-num=20 \ dh_auto_test cd obj-i686-linux-gnu && make -j16 test ARGS\+=-j16 make[2]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' Running tests... /usr/bin/ctest --force-new-ctest-process --auto-servernum --server-num '20' -- 'dh_auto_test' -j16 Test project /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu No tests were found!!! make[2]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[1]: Leaving directory '/build/cmtk-3.3.1p1+dfsg' create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary dh binary dh: warning: invalid flag in DEB_BUILD_OPTIONS: " dh: warning: invalid flag in DEB_BUILD_OPTIONS: nocheck" dh_testroot dh_prep rm -f -- debian/cmtk.substvars rm -fr -- debian/.debhelper/generated/cmtk/ debian/cmtk/ debian/tmp/ dh_installdirs install -d debian/cmtk/etc/cmtk rm -f debian/cmtk.debhelper.log debian/rules override_dh_auto_install make[1]: Entering directory '/build/cmtk-3.3.1p1+dfsg' dh_auto_install cd obj-i686-linux-gnu && make -j16 install DESTDIR=/build/cmtk-3.3.1p1\+dfsg/debian/cmtk AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[2]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' /usr/bin/cmake -S/build/cmtk-3.3.1p1+dfsg -B/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/CMakeFiles /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/build.make Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/depend make -f Utilities/mxml/CMakeFiles/cmtkMxml.dir/build.make Utilities/mxml/CMakeFiles/cmtkMxml.dir/depend make -f libs/Numerics/CMakeFiles/cmtkNumerics.dir/build.make libs/Numerics/CMakeFiles/cmtkNumerics.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/Utilities/mxml /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/mxml /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/mxml/CMakeFiles/cmtkMxml.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/libs/Numerics /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Numerics /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Numerics/CMakeFiles/cmtkNumerics.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f Utilities/mxml/CMakeFiles/cmtkMxml.dir/build.make Utilities/mxml/CMakeFiles/cmtkMxml.dir/build make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Nothing to be done for 'Utilities/mxml/CMakeFiles/cmtkMxml.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/build.make Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f libs/Numerics/CMakeFiles/cmtkNumerics.dir/build.make libs/Numerics/CMakeFiles/cmtkNumerics.dir/build make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Nothing to be done for 'libs/Numerics/CMakeFiles/cmtkNumerics.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Nothing to be done for 'Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 2%] Built target cmtkMxml make -f libs/System/CMakeFiles/cmtkSystem.dir/build.make libs/System/CMakeFiles/cmtkSystem.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/libs/System /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/System/CMakeFiles/cmtkSystem.dir/DependInfo.cmake --color= [ 8%] Built target cmtkNumerics [ 16%] Built target NrrdIO make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f libs/System/CMakeFiles/cmtkSystem.dir/build.make libs/System/CMakeFiles/cmtkSystem.dir/build make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Nothing to be done for 'libs/System/CMakeFiles/cmtkSystem.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 22%] Built target cmtkSystem make -f libs/Base/CMakeFiles/cmtkBase.dir/build.make libs/Base/CMakeFiles/cmtkBase.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/libs/Base /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Base/CMakeFiles/cmtkBase.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f libs/Base/CMakeFiles/cmtkBase.dir/build.make libs/Base/CMakeFiles/cmtkBase.dir/build make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Nothing to be done for 'libs/Base/CMakeFiles/cmtkBase.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 42%] Built target cmtkBase make -f libs/IO/CMakeFiles/cmtkIO.dir/build.make libs/IO/CMakeFiles/cmtkIO.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/libs/IO /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/IO/CMakeFiles/cmtkIO.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f libs/IO/CMakeFiles/cmtkIO.dir/build.make libs/IO/CMakeFiles/cmtkIO.dir/build make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Nothing to be done for 'libs/IO/CMakeFiles/cmtkIO.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 50%] Built target cmtkIO make -f libs/Registration/CMakeFiles/cmtkRegistration.dir/build.make libs/Registration/CMakeFiles/cmtkRegistration.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/libs/Registration /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Registration/CMakeFiles/cmtkRegistration.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f libs/Registration/CMakeFiles/cmtkRegistration.dir/build.make libs/Registration/CMakeFiles/cmtkRegistration.dir/build make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Nothing to be done for 'libs/Registration/CMakeFiles/cmtkRegistration.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 63%] Built target cmtkRegistration make -f libs/Recon/CMakeFiles/cmtkRecon.dir/build.make libs/Recon/CMakeFiles/cmtkRecon.dir/depend make -f libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/build.make libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/libs/Recon /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Recon /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Recon/CMakeFiles/cmtkRecon.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/libs/Segmentation /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Segmentation /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f libs/Recon/CMakeFiles/cmtkRecon.dir/build.make libs/Recon/CMakeFiles/cmtkRecon.dir/build make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Nothing to be done for 'libs/Recon/CMakeFiles/cmtkRecon.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/build.make libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/build [ 63%] Built target cmtkRecon make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Nothing to be done for 'libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 67%] Built target cmtkSegmentation make -f apps/CMakeFiles/detect_spheres_matched_filter.dir/build.make apps/CMakeFiles/detect_spheres_matched_filter.dir/depend make -f apps/CMakeFiles/dcm2image.dir/build.make apps/CMakeFiles/dcm2image.dir/depend make -f apps/CMakeFiles/asegment_sri24.dir/build.make apps/CMakeFiles/asegment_sri24.dir/depend make -f apps/CMakeFiles/dbtool.dir/build.make apps/CMakeFiles/dbtool.dir/depend make -f apps/CMakeFiles/warp.dir/build.make apps/CMakeFiles/warp.dir/depend make -f apps/CMakeFiles/volume_reconstruction.dir/build.make apps/CMakeFiles/volume_reconstruction.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/detect_spheres_matched_filter.dir/DependInfo.cmake --color= make -f apps/CMakeFiles/volume_injection.dir/build.make apps/CMakeFiles/volume_injection.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/dcm2image.dir/DependInfo.cmake --color= make -f apps/CMakeFiles/unwarp_image_phantom.dir/build.make apps/CMakeFiles/unwarp_image_phantom.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/asegment_sri24.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/dbtool.dir/DependInfo.cmake --color= make -f apps/CMakeFiles/ttest.dir/build.make apps/CMakeFiles/ttest.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/warp.dir/DependInfo.cmake --color= make -f apps/CMakeFiles/sympl.dir/build.make apps/CMakeFiles/sympl.dir/depend make -f apps/CMakeFiles/streamxform.dir/build.make apps/CMakeFiles/streamxform.dir/depend make -f apps/CMakeFiles/stream_pixels.dir/build.make apps/CMakeFiles/stream_pixels.dir/depend make -f apps/CMakeFiles/xform2scalar.dir/build.make apps/CMakeFiles/xform2scalar.dir/depend make -f apps/CMakeFiles/filter.dir/build.make apps/CMakeFiles/filter.dir/depend make -f apps/CMakeFiles/asegment.dir/build.make apps/CMakeFiles/asegment.dir/depend make -f apps/CMakeFiles/fit_spline_xform.dir/build.make apps/CMakeFiles/fit_spline_xform.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/volume_reconstruction.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/volume_injection.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/unwarp_image_phantom.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/ttest.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/sympl.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/streamxform.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/stream_pixels.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/xform2scalar.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/filter.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu 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/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/fibxform.dir/DependInfo.cmake --color= [ 69%] Built target asegment_sri24 make -f apps/CMakeFiles/dwi_mask_bad_slices.dir/build.make apps/CMakeFiles/dwi_mask_bad_slices.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/groupwise_affine.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/filter.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/asegment.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/volume_injection.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/xform2scalar.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/fit_affine_dfield.dir/build.make apps/CMakeFiles/fit_affine_dfield.dir/build make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/streamxform.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/dwi_mask_bad_slices.dir/DependInfo.cmake --color= [ 70%] Built target ttest [ 72%] Built target warp [ 72%] Built target unwarp_image_phantom make -f apps/CMakeFiles/film.dir/build.make apps/CMakeFiles/film.dir/depend make -f apps/CMakeFiles/destripe.dir/build.make apps/CMakeFiles/destripe.dir/depend make -f apps/CMakeFiles/mcaffine.dir/build.make apps/CMakeFiles/mcaffine.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/fit_spline_xform.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 72%] Built target stream_pixels make -f apps/CMakeFiles/sba.dir/build.make apps/CMakeFiles/sba.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/film.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu 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/build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/sba.dir/DependInfo.cmake --color= [ 73%] Built target filter make -f apps/CMakeFiles/dof2mat.dir/build.make apps/CMakeFiles/dof2mat.dir/depend [ 73%] Built target volume_injection make -f apps/CMakeFiles/histogram.dir/build.make apps/CMakeFiles/histogram.dir/depend [ 74%] Built target xform2scalar [ 74%] Built target asegment make -f apps/CMakeFiles/groupwise_init.dir/build.make apps/CMakeFiles/groupwise_init.dir/depend make -f apps/CMakeFiles/mk_phantom_3d.dir/build.make apps/CMakeFiles/mk_phantom_3d.dir/depend [ 75%] Built target streamxform make -f apps/CMakeFiles/glm.dir/build.make apps/CMakeFiles/glm.dir/depend [ 75%] Built target fit_spline_xform make -f apps/CMakeFiles/avg_adm.dir/build.make apps/CMakeFiles/avg_adm.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/dof2mat.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/histogram.dir/DependInfo.cmake --color= [ 76%] Built target volume_reconstruction make -f apps/CMakeFiles/lsba.dir/build.make apps/CMakeFiles/lsba.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/mk_phantom_3d.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/groupwise_init.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/glm.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/avg_adm.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/lsba.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/sympl.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 76%] Built target sympl make -f apps/CMakeFiles/pxsearch.dir/build.make apps/CMakeFiles/pxsearch.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/pxsearch.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/fibxform.dir/build.make apps/CMakeFiles/fibxform.dir/build make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/fit_affine_dfield.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/dwi_mask_bad_slices.dir/build.make apps/CMakeFiles/dwi_mask_bad_slices.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/destripe.dir/build.make apps/CMakeFiles/destripe.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/sba.dir/build.make apps/CMakeFiles/sba.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/dof2mat.dir/build.make apps/CMakeFiles/dof2mat.dir/build [ 76%] Built target fit_affine_dfield make -f apps/CMakeFiles/split.dir/build.make apps/CMakeFiles/split.dir/depend make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/groupwise_affine.dir/build.make apps/CMakeFiles/groupwise_affine.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/film.dir/build.make apps/CMakeFiles/film.dir/build make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/split.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/histogram.dir/build.make apps/CMakeFiles/histogram.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/mk_phantom_3d.dir/build.make apps/CMakeFiles/mk_phantom_3d.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/glm.dir/build.make apps/CMakeFiles/glm.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/mcaffine.dir/build.make apps/CMakeFiles/mcaffine.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/groupwise_init.dir/build.make apps/CMakeFiles/groupwise_init.dir/build make -f apps/CMakeFiles/lsba.dir/build.make apps/CMakeFiles/lsba.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/avg_adm.dir/build.make apps/CMakeFiles/avg_adm.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/pxsearch.dir/build.make apps/CMakeFiles/pxsearch.dir/build make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/fibxform.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/dwi_mask_bad_slices.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/destripe.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/dof2mat.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 77%] Built target fibxform make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/sba.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/gmm.dir/build.make apps/CMakeFiles/gmm.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/gmm.dir/DependInfo.cmake --color= [ 78%] Built target dwi_mask_bad_slices make -f apps/CMakeFiles/vtkxform.dir/build.make apps/CMakeFiles/vtkxform.dir/depend [ 78%] Built target destripe make -f apps/CMakeFiles/fit_affine_xform.dir/build.make apps/CMakeFiles/fit_affine_xform.dir/depend make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 78%] Built target dof2mat make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/histogram.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/split.dir/build.make apps/CMakeFiles/split.dir/build [ 79%] Built target sba make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/vtkxform.dir/DependInfo.cmake --color= make -f apps/CMakeFiles/detect_adni_phantom.dir/build.make apps/CMakeFiles/detect_adni_phantom.dir/depend make -f apps/CMakeFiles/average_images.dir/build.make apps/CMakeFiles/average_images.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/mk_phantom_3d.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/fit_affine_xform.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/average_images.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/detect_adni_phantom.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/glm.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/film.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/lsba.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/groupwise_affine.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 79%] Built target histogram [ 79%] Built target mk_phantom_3d make -f apps/CMakeFiles/geomatch.dir/build.make apps/CMakeFiles/geomatch.dir/depend make -f apps/CMakeFiles/vol2csv.dir/build.make apps/CMakeFiles/vol2csv.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/groupwise_init.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/geomatch.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/vol2csv.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/pxsearch.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 79%] Built target glm [ 79%] Built target film make -f apps/CMakeFiles/imagemath.dir/build.make apps/CMakeFiles/imagemath.dir/depend make -f apps/CMakeFiles/groupwise_warp.dir/build.make apps/CMakeFiles/groupwise_warp.dir/depend [ 79%] Built target lsba make -f apps/CMakeFiles/lvote.dir/build.make apps/CMakeFiles/lvote.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/mcaffine.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/imagemath.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/groupwise_warp.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/avg_adm.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 79%] Built target groupwise_affine make -f apps/CMakeFiles/convertx.dir/build.make apps/CMakeFiles/convertx.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/lvote.dir/DependInfo.cmake --color= [ 80%] Built target groupwise_init make -f apps/CMakeFiles/symplx.dir/build.make apps/CMakeFiles/symplx.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/convertx.dir/DependInfo.cmake --color= [ 80%] Built target pxsearch make -f apps/CMakeFiles/average_affine.dir/build.make apps/CMakeFiles/average_affine.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/symplx.dir/DependInfo.cmake --color= [ 80%] Built target mcaffine make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/average_affine.dir/DependInfo.cmake --color= [ 80%] Built target avg_adm make -f apps/CMakeFiles/mcwarp.dir/build.make apps/CMakeFiles/mcwarp.dir/depend make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/gmm.dir/build.make apps/CMakeFiles/gmm.dir/build make -f apps/CMakeFiles/average_labels.dir/build.make apps/CMakeFiles/average_labels.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/mcwarp.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/average_labels.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/split.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/vtkxform.dir/build.make apps/CMakeFiles/vtkxform.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/average_images.dir/build.make apps/CMakeFiles/average_images.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/fit_affine_xform.dir/build.make apps/CMakeFiles/fit_affine_xform.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/detect_adni_phantom.dir/build.make apps/CMakeFiles/detect_adni_phantom.dir/build [ 80%] Built target split make -f apps/CMakeFiles/convert_warp.dir/build.make apps/CMakeFiles/convert_warp.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/convert_warp.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/vol2csv.dir/build.make apps/CMakeFiles/vol2csv.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/geomatch.dir/build.make apps/CMakeFiles/geomatch.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/imagemath.dir/build.make apps/CMakeFiles/imagemath.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/lvote.dir/build.make apps/CMakeFiles/lvote.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/symplx.dir/build.make apps/CMakeFiles/symplx.dir/build make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/gmm.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/average_affine.dir/build.make apps/CMakeFiles/average_affine.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/groupwise_warp.dir/build.make apps/CMakeFiles/groupwise_warp.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/average_labels.dir/build.make apps/CMakeFiles/average_labels.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/convertx.dir/build.make apps/CMakeFiles/convertx.dir/build [ 81%] Built target gmm make -f apps/CMakeFiles/make_initial_affine.dir/build.make apps/CMakeFiles/make_initial_affine.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/vtkxform.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/make_initial_affine.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/average_images.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/fit_affine_xform.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/detect_adni_phantom.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/mcwarp.dir/build.make apps/CMakeFiles/mcwarp.dir/build [ 81%] Built target vtkxform make -f apps/CMakeFiles/hausdorff.dir/build.make apps/CMakeFiles/hausdorff.dir/depend [ 81%] Built target average_images make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/convert_warp.dir/build.make apps/CMakeFiles/convert_warp.dir/build make -f apps/CMakeFiles/describe.dir/build.make apps/CMakeFiles/describe.dir/depend [ 81%] Built target fit_affine_xform make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/hausdorff.dir/DependInfo.cmake --color= make -f apps/CMakeFiles/jidb.dir/build.make apps/CMakeFiles/jidb.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/vol2csv.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 81%] Built target detect_adni_phantom make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/geomatch.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/mk_nifti_hdr.dir/build.make apps/CMakeFiles/mk_nifti_hdr.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/describe.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps 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Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 82%] Built target geomatch make -f apps/CMakeFiles/warpx.dir/build.make apps/CMakeFiles/warpx.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/levelset.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/warpx.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/symplx.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 83%] Built target lvote make -f apps/CMakeFiles/unsplit.dir/build.make apps/CMakeFiles/unsplit.dir/depend [ 83%] Built target imagemath make -f apps/CMakeFiles/lmsba.dir/build.make apps/CMakeFiles/lmsba.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/unsplit.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Nothing to be done for 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apps/CMakeFiles/make_initial_affine.dir/build.make apps/CMakeFiles/make_initial_affine.dir/build make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/similarity.dir/DependInfo.cmake --color= [ 84%] Built target average_affine [ 85%] Built target average_labels make -f apps/CMakeFiles/sequence.dir/build.make apps/CMakeFiles/sequence.dir/depend make -f apps/CMakeFiles/mat2dof.dir/build.make apps/CMakeFiles/mat2dof.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/sequence.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/mat2dof.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/groupwise_warp.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/convertx.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/mk_nifti_hdr.dir/build.make apps/CMakeFiles/mk_nifti_hdr.dir/build make -f apps/CMakeFiles/hausdorff.dir/build.make apps/CMakeFiles/hausdorff.dir/build make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/convert_warp.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/describe.dir/build.make apps/CMakeFiles/describe.dir/build [ 85%] Built target groupwise_warp make -f apps/CMakeFiles/mk_adni_phantom.dir/build.make apps/CMakeFiles/mk_adni_phantom.dir/depend [ 85%] Built target convertx make -f apps/CMakeFiles/registrationx.dir/build.make apps/CMakeFiles/registrationx.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/mk_adni_phantom.dir/DependInfo.cmake --color= [ 85%] Built target convert_warp make -f apps/CMakeFiles/mk_analyze_hdr.dir/build.make apps/CMakeFiles/mk_analyze_hdr.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/registrationx.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/jidb.dir/build.make apps/CMakeFiles/jidb.dir/build make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/mk_analyze_hdr.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/mcwarp.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/levelset.dir/build.make apps/CMakeFiles/levelset.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/warpx.dir/build.make apps/CMakeFiles/warpx.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/sequence.dir/build.make apps/CMakeFiles/sequence.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/unsplit.dir/build.make apps/CMakeFiles/unsplit.dir/build [ 85%] Built target mcwarp make -f apps/CMakeFiles/fib2image.dir/build.make apps/CMakeFiles/fib2image.dir/depend make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/lmsba.dir/build.make apps/CMakeFiles/lmsba.dir/build make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg 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target make_initial_affine make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/mk_analyze_hdr.dir/build.make apps/CMakeFiles/mk_analyze_hdr.dir/build make -f apps/CMakeFiles/mrbias.dir/build.make apps/CMakeFiles/mrbias.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/hausdorff.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/describe.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/mrbias.dir/DependInfo.cmake --color= [ 86%] Built target mk_nifti_hdr make -f apps/CMakeFiles/overlap.dir/build.make apps/CMakeFiles/overlap.dir/depend make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/mk_adni_phantom.dir/build.make apps/CMakeFiles/mk_adni_phantom.dir/build [ 87%] Built target hausdorff make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/overlap.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/sequence.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/xform2dfield.dir/build.make apps/CMakeFiles/xform2dfield.dir/depend [ 88%] Built target describe make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/xform2dfield.dir/DependInfo.cmake --color= make -f apps/CMakeFiles/concat_affine.dir/build.make apps/CMakeFiles/concat_affine.dir/depend make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/registrationx.dir/build.make apps/CMakeFiles/registrationx.dir/build make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/concat_affine.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/levelset.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 89%] Built target sequence make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/jidb.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/probe.dir/build.make apps/CMakeFiles/probe.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/unsplit.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/probe.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/warpx.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/lmsba.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/fib2image.dir/build.make apps/CMakeFiles/fib2image.dir/build make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/mk_analyze_hdr.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 90%] Built target levelset make -f apps/CMakeFiles/reformatx.dir/build.make apps/CMakeFiles/reformatx.dir/depend [ 90%] Built target jidb make -f apps/CMakeFiles/xform2itk.dir/build.make apps/CMakeFiles/xform2itk.dir/depend [ 90%] Built target unsplit make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/reformatx.dir/DependInfo.cmake --color= make -f apps/CMakeFiles/registration.dir/build.make apps/CMakeFiles/registration.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/xform2itk.dir/DependInfo.cmake --color= [ 90%] Built target warpx make -f apps/CMakeFiles/warp2ps.dir/build.make apps/CMakeFiles/warp2ps.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/registration.dir/DependInfo.cmake --color= [ 90%] Built target lmsba make -f apps/CMakeFiles/fit_spline_dfield.dir/build.make apps/CMakeFiles/fit_spline_dfield.dir/depend [ 90%] Built target mk_analyze_hdr make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/similarity.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/regress.dir/build.make apps/CMakeFiles/regress.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/warp2ps.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/fit_spline_dfield.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/mat2dof.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/regress.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/mk_adni_phantom.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 90%] Built target similarity make -f apps/CMakeFiles/gregxform.dir/build.make apps/CMakeFiles/gregxform.dir/depend make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/overlap.dir/build.make apps/CMakeFiles/overlap.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/mrbias.dir/build.make apps/CMakeFiles/mrbias.dir/build make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/gregxform.dir/DependInfo.cmake --color= [ 91%] Built target mat2dof make -f apps/CMakeFiles/epiunwarp.dir/build.make apps/CMakeFiles/epiunwarp.dir/depend [ 92%] Built target mk_adni_phantom make -f apps/CMakeFiles/sbai.dir/build.make apps/CMakeFiles/sbai.dir/depend make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/xform2dfield.dir/build.make apps/CMakeFiles/xform2dfield.dir/build make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/epiunwarp.dir/DependInfo.cmake --color= make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/sbai.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/concat_affine.dir/build.make apps/CMakeFiles/concat_affine.dir/build make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/registrationx.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/probe.dir/build.make apps/CMakeFiles/probe.dir/build [ 93%] Built target registrationx make -f apps/CMakeFiles/reorient.dir/build.make apps/CMakeFiles/reorient.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/fib2image.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/reorient.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/xform2itk.dir/build.make apps/CMakeFiles/xform2itk.dir/build [ 93%] Built target fib2image make -f apps/CMakeFiles/fit_affine_xform_landmarks.dir/build.make apps/CMakeFiles/fit_affine_xform_landmarks.dir/depend make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/registration.dir/build.make apps/CMakeFiles/registration.dir/build make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/fit_affine_xform_landmarks.dir/DependInfo.cmake --color= make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/reformatx.dir/build.make apps/CMakeFiles/reformatx.dir/build make -f apps/CMakeFiles/warp2ps.dir/build.make apps/CMakeFiles/warp2ps.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/fit_spline_dfield.dir/build.make apps/CMakeFiles/fit_spline_dfield.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/regress.dir/build.make apps/CMakeFiles/regress.dir/build make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/overlap.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/gregxform.dir/build.make apps/CMakeFiles/gregxform.dir/build make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/epiunwarp.dir/build.make apps/CMakeFiles/epiunwarp.dir/build [ 94%] Built target overlap make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/xform2dfield.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/interleaved_bad_slices.dir/build.make apps/CMakeFiles/interleaved_bad_slices.dir/depend make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/mrbias.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/sbai.dir/build.make apps/CMakeFiles/sbai.dir/build make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/concat_affine.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/interleaved_bad_slices.dir/DependInfo.cmake --color= [ 94%] Built target mrbias make -f apps/CMakeFiles/statistics.dir/build.make apps/CMakeFiles/statistics.dir/depend [ 95%] Built target xform2dfield make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/reorient.dir/build.make apps/CMakeFiles/reorient.dir/build make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/probe.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' cd /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/cmtk-3.3.1p1+dfsg /build/cmtk-3.3.1p1+dfsg/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/apps/CMakeFiles/statistics.dir/DependInfo.cmake --color= [ 96%] Built target concat_affine make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/xform2itk.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/fit_affine_xform_landmarks.dir/build.make apps/CMakeFiles/fit_affine_xform_landmarks.dir/build [ 96%] Built target probe make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/warp2ps.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/fit_spline_dfield.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 96%] Built target xform2itk make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/registration.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/regress.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/reformatx.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/gregxform.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 96%] Built target warp2ps make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/epiunwarp.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/sbai.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/interleaved_bad_slices.dir/build.make apps/CMakeFiles/interleaved_bad_slices.dir/build [ 96%] Built target registration [ 96%] Built target fit_spline_dfield make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/reorient.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/fit_affine_xform_landmarks.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make -f apps/CMakeFiles/statistics.dir/build.make apps/CMakeFiles/statistics.dir/build [ 96%] Built target regress [ 97%] Built target reformatx make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/interleaved_bad_slices.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/statistics.dir/build'. make[4]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' [ 97%] Built target gregxform [ 97%] Built target epiunwarp [ 97%] Built target sbai [ 97%] Built target reorient [ 98%] Built target fit_affine_xform_landmarks [ 99%] Built target interleaved_bad_slices [100%] Built target statistics make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_start /build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu/CMakeFiles 0 make -f CMakeFiles/Makefile2 preinstall make[3]: Entering directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' make[3]: Nothing to be done for 'preinstall'. make[3]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "None" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/share/cmtk/doc/COPYING.txt -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/share/cmtk/doc/README.txt -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/share/cmtk/doc//Licenses -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/share/cmtk/doc//Licenses/LICENSE.sqlite3 -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/share/cmtk/doc//Licenses/LICENSE.alglib -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/share/cmtk/doc//Licenses/LICENSE.dcmtk -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/share/cmtk/doc//Licenses/LICENSE.numdiff -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/share/cmtk/doc//Licenses/LICENSE.vtk -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/share/cmtk/doc//Licenses/LICENSE.zlib -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/share/cmtk/doc//Licenses/LICENSE.mxml -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/share/cmtk/doc//Licenses/LICENSE.NrrdIO -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/share/cmtk/doc//Licenses/LICENSE.cmtk -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/UseCMTK.cmake -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/CMTKConfig.cmake -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/cmtkconfig.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/CMTKLibraryDepends.cmake -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/libNrrdIO.so -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/NrrdIO.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/cmtk_NrrdIO_mangle.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/privateAir.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/privateBiff.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/privateNrrd.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/teem32bit.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/teemDio.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/teemEndian.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/teemPng.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/teemQnanhibit.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/libcmtkMxml.so -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/cmtk_mxml_mangle.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/mxml-private.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/mxml.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/config.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/avg_adm -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/avg_adm" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/describe -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/describe" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/groupwise_init -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/groupwise_init" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/groupwise_affine -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/groupwise_affine" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/groupwise_warp -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/groupwise_warp" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/asegment -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/asegment" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/average_affine -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/average_affine" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/average_images -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/average_images" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/average_labels -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/average_labels" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/concat_affine -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/concat_affine" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/convertx -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/convertx" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/convert_warp -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/convert_warp" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/destripe -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/destripe" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/dof2mat -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/dof2mat" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/dwi_mask_bad_slices -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/dwi_mask_bad_slices" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/epiunwarp -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/epiunwarp" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/fibxform -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/fibxform" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/fib2image -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/fib2image" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/film -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/film" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/filter -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/filter" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/fit_affine_dfield -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/fit_affine_dfield" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/fit_affine_xform -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/fit_affine_xform" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/fit_affine_xform_landmarks -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/fit_affine_xform_landmarks" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/fit_spline_dfield -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/fit_spline_dfield" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/fit_spline_xform -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/fit_spline_xform" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/geomatch -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/geomatch" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/glm -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/glm" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/gmm -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/gmm" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/gregxform -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/gregxform" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/hausdorff -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/hausdorff" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/histogram -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/histogram" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/imagemath -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/imagemath" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/interleaved_bad_slices -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/interleaved_bad_slices" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/jidb -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/jidb" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/levelset -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/levelset" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/lsba -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/lsba" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/lmsba -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/lmsba" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/lvote -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/lvote" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/make_initial_affine -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/make_initial_affine" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/mat2dof -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/mat2dof" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/mk_adni_phantom -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/mk_adni_phantom" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/mk_analyze_hdr -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/mk_analyze_hdr" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/mk_nifti_hdr -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/mk_nifti_hdr" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/mk_phantom_3d -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/mk_phantom_3d" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/mrbias -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/mrbias" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/overlap -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/overlap" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/probe -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/probe" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/pxsearch -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/pxsearch" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/reformatx -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/reformatx" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/registration -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/registration" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/registrationx -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/registrationx" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/regress -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/regress" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/reorient -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/reorient" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/sba -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/sba" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/sbai -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/sbai" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/sequence -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/sequence" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/similarity -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/similarity" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/split -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/split" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/statistics -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/statistics" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/stream_pixels -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/stream_pixels" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/streamxform -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/streamxform" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/sympl -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/sympl" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/symplx -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/symplx" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/ttest -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/ttest" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/unsplit -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/unsplit" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/unwarp_image_phantom -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/unwarp_image_phantom" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/vol2csv -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/vol2csv" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/volume_injection -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/volume_injection" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/volume_reconstruction -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/volume_reconstruction" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/vtkxform -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/vtkxform" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/warp -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/warp" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/warpx -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/warpx" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/warp2ps -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/warp2ps" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/xform2dfield -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/xform2dfield" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/xform2itk -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/xform2itk" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/xform2scalar -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/xform2scalar" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/dbtool -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/dbtool" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/asegment_sri24 -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/asegment_sri24" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/mcaffine -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/mcaffine" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/mcwarp -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/mcwarp" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/dcm2image -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/dcm2image" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/detect_spheres_matched_filter -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/detect_spheres_matched_filter" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/detect_adni_phantom -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/detect_adni_phantom" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/libcmtkSystem.so -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/libcmtkSystem.so" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkCannotBeCopied.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkCommandLine.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkCommandLineTypeTraits.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkCompressedStream.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkConsole.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkCoverity.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkDebugOutput.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkException.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkExitException.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkFFTW.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkFileUtils.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkLockingPtr.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkMemory.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkMountPoints.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkMutexLock.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkProgress.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkProgressConsole.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkRegressionTracker.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkSafeCounter.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkSafeCounterGCD.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkSafeCounterMutex.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkSmartConstPtr.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkSmartPtr.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkStackBacktrace.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkStrUtility.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkTestFunctionMap.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkThreadParameterArray.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkThreadParameters.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkThreadPool.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkThreadPoolGCD.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkThreadPoolThreads.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkThreadSemaphore.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkThreadSystemTypes.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkThreads.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkTimers.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/doxygen.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkCommandLineConvert.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkCommandLineItem.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkCommandLineList.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkCommandLineOption.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkCommandLineVector.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkThreadParameterArray.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkThreadPoolGCD.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkThreadPoolThreads.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkThreadSemaphoreAppleIsRetarded.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkThreadSemaphoreNone.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkThreadSemaphorePOSIX.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkThreadSemaphoreWindows.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/libcmtkNumerics.so -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/libcmtkNumerics.so" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/ap.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/apvt.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/bdsvd.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/bidiagonal.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/blas.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/cholesky.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/det.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/gammaf.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/hessenberg.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/hsschur.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/ibetaf.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/igammaf.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/lbfgsb.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/lq.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/lu.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/normaldistr.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/nsevd.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/qr.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/randomc.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/reflections.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/rotations.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/sblas.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/sevd.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/spddet.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/studenttdistr.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/studentttests.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/svd.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/tdevd.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/tridiagonal.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/libcmtkBase.so -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/libcmtkBase.so" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkActiveDeformationModel.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkActiveShapeModel.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkAffineXform.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkAffineXformUniformVolume.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkAnatomicalOrientation.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkAnatomicalOrientationBase.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkBitVector.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkCompatibilityMatrix4x4.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkCubicInterpolator.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkCubicSpline.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkDataGrid.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkDataGridFilter.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkDataGridLocalCorrelation.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkDataGridMorphologicalOperators.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkDataTypeTraits.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkDeformationField.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkDetectedPhantomMagphanEMR051.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkDirectionSet.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkDistanceMap.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkEigenSystemSymmetricMatrix.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkEigenSystemSymmetricMatrix3x3.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkEigenValuesSymmetricMatrix.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFilterMask.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFilterVolume.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFitAffineToLandmarks.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFitAffineToWarpXform.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFitAffineToXformList.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFitPolynomialToLandmarks.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFitRigidToLandmarks.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFitSplineWarpToDeformationField.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFitSplineWarpToLandmarks.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFitSplineWarpToXformList.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFitToXformListBase.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFixedArray.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFixedSquareMatrix.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFixedVector.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFunctional.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkGaussianKernel.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkGeneralLinearModel.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkHashMapSTL.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkHistogram.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkHistogramBase.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkHistogramOtsuThreshold.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkHistogramThresholdByVolume.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkHypothesisTests.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperation.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationBoundaryMap.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationConnectedComponents.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationConvertType.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationCropRegion.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationCropThreshold.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationDistanceMap.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationDownsample.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationErodeDilate.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationErodeDilateDistance.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationFlip.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationGaussFilter.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationHistogramEqualization.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationLaplaceFilter.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationMapValues.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationOtsuThreshold.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationPruneHistogram.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationRegionFilter.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationReplace.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationResampleIsotropic.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationRevert.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationScaleToRange.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationSetDataClass.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationSetPadding.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationThreshold.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageTemplate.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkInterpolator.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkJointHistogram.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkJointHistogramBase.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkLandmark.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkLandmarkList.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkLandmarkPair.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkLandmarkPairList.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkLeastSquares.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkLinearInterpolator.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkLogHistogram.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkMacros.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkMagphanEMR051.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkMathFunctionWrappers.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkMathUtil.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkMatrix.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkMatrix3x3.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkMatrix4x4.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkMetaInformationObject.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkNearestNeighborInterpolator.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkParametricPlane.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkPolynomial.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkPolynomialXform.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkProbeInfo.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkQRDecomposition.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkRegion.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkRegionIndexIterator.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkRegionSphereIterator.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkScalarImage.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkScalarImageGradientField.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkSegmentationLabel.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkSincInterpolator.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkSplineWarpXform.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkSplineWarpXformUniformVolume.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkSurfaceNormal.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkSymmetricMatrix.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkTemplateArray.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkTransformChangeFromSpaceAffine.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkTransformChangeToSpaceAffine.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkTransformedVolumeAxes.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkTypedArray.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkTypedArrayFunction.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkTypedArrayFunctionHistogramEqualization.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkTypedArrayFunctionHistogramMatching.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkTypedArrayNoiseEstimatorNaiveGaussian.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkTypes.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkUniformDistanceMap.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkUniformVolume.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkUniformVolumeGaussianFilter.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkUniformVolumeHoughTransformSphere.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkUniformVolumeInterpolator.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkUniformVolumeInterpolatorBase.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkUniformVolumeInterpolatorPartialVolume.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkUniformVolumeLaplaceFilter.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkUniformVolumeMorphologicalOperators.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkUniformVolumePainter.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkUnionFind.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkUnits.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkValueSequence.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkVector.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkVector3D.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkVolume.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkVolumeClipping.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkVolumeGridToGridLookup.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkWarpXform.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkXform.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkXformList.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkXformListEntry.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkXformUniformVolume.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/doxygen.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkDataGrid.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkDataGridFilter.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkEigenSystemSymmetricMatrix.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkEigenSystemSymmetricMatrix3x3.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkEigenValuesSymmetricMatrix.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFixedSquareMatrix.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkHistogram.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkHistogramOtsuThreshold.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkHistogramThresholdByVolume.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkMathUtil_Statistics.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkQRDecomposition.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkRegion.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkTemplateArray.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkTemplateArray_Statistics.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkUniformVolume.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkUniformVolumeInterpolator.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkValueSequence.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkVector.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkVolume.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/libcmtkIO.so -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/libcmtkIO.so" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkAffineXformITKIO.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkAnalyze.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkClassStreamAffineXform.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkClassStreamInput.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkClassStreamMultiChannelRegistration.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkClassStreamOutput.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkClassStreamPolynomialXform.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkClassStreamStudyList.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkDICOM.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkFileConstHeader.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkFileFormat.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkFileHeader.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkGroupwiseRegistrationFunctionalIO.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkImageFileDICOM.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkImageOperationApplyMask.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkImageOperationMatchIntensities.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkImageStackDICOM.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkLandmarkIO.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkLandmarkListIO.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkPhantomIO.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkSQLite.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkSegmentationLabelIO.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkSiemensCSAHeader.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkSplineWarpXformITKIO.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkStudy.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkStudyImageSet.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkStudyList.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkTypedStream.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkTypedStreamInput.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkTypedStreamOutput.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkTypedStreamStudylist.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkVolumeFromFile.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkVolumeFromSlices.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkVolumeFromStudy.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkVolumeIO.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkXformIO.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkXformListIO.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/doxygen.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/nifti1.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/nifti1_io_math.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkClassStreamMultiChannelRegistration.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/libcmtkRegistration.so -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/libcmtkRegistration.so" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkAffineCongealingFunctional.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkAffineGroupwiseRegistrationRMIFunctional.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkAffineMultiChannelRegistrationFunctional.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkAffineRegistration.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkAffineRegistrationCommandLine.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkBestDirectionOptimizer.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkBestNeighbourOptimizer.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkCongealingFunctional.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkEchoPlanarUnwarpFunctional.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkElasticRegistration.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkElasticRegistrationCommandLine.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkGroupwiseRegistrationFunctionalAffineInitializer.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkGroupwiseRegistrationFunctionalBase.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkGroupwiseRegistrationFunctionalXformTemplate.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkGroupwiseRegistrationFunctionalXformTemplateBase.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkGroupwiseRegistrationFunctionalXformTemplate_Affine.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkGroupwiseRegistrationFunctionalXformTemplate_SplineWarp.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkGroupwiseRegistrationOutput.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkGroupwiseRegistrationRMIFunctional.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkHausdorffDistance.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairAffineRegistration.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairAffineRegistrationCommandLine.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairAffineRegistrationFunctional.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairAffineRegistrationFunctionalTemplate.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairNonrigidRegistration.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairNonrigidRegistrationCommandLine.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairNonrigidRegistrationFunctional.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairNonrigidRegistrationFunctionalTemplate.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairRegistration.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairRegistrationFunctional.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairSimilarityJointHistogram.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairSimilarityMeasure.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairSimilarityMeasureCR.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairSimilarityMeasureMI.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairSimilarityMeasureMSD.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairSimilarityMeasureNCC.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairSimilarityMeasureNMI.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairSimilarityMeasureRMS.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairSymmetricAffineRegistrationFunctional.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairSymmetricAffineRegistrationFunctionalTemplate.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairSymmetricNonrigidRegistrationFunctional.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairSymmetricNonrigidRegistrationFunctionalTemplate.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImageSymmetryPlaneCommandLine.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImageSymmetryPlaneCommandLineBase.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImageSymmetryPlaneFunctional.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImageSymmetryPlaneFunctionalBase.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImageXformDB.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkMakeInitialAffineTransformation.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkMultiChannelHistogramRegistrationFunctional.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkMultiChannelRMIRegistrationFunctional.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkMultiChannelRegistrationFunctional.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkMultiChannelRegistrationFunctionalBase.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkOptimizer.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkOptimizerBase.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkProtocolCallback.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkReformatVolume.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkRegistrationCallback.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkRegistrationJointHistogram.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkScaleHistogramValueTrait.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkSearchTrace.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkSplineWarpCongealingFunctional.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkSplineWarpGroupwiseRegistrationRMIFunctional.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkSplineWarpMultiChannelIntensityCorrectionRegistrationFunctional.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkSplineWarpMultiChannelRegistrationFunctional.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkSymmetricElasticFunctional.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkSymmetryPlaneFunctional.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkTemplateMultiChannelRegistrationFunctional.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkTypedArraySimilarity.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkTypedArraySimilarityMemory.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkVoxelMatchingAffineFunctional.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkVoxelMatchingAffineFunctionalTemplate.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkVoxelMatchingCorrRatio.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkVoxelMatchingCrossCorrelation.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkVoxelMatchingElasticFunctional.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkVoxelMatchingFunctional.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkVoxelMatchingMeanSquaredDifference.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkVoxelMatchingMetric.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkVoxelMatchingMetric_Type.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkVoxelMatchingMutInf.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkVoxelMatchingNormMutInf.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkVoxelRegistration.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/doxygen.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkAffineMultiChannelRegistrationFunctional.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairAffineRegistrationFunctionalTemplate.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairNonrigidRegistrationFunctionalTemplate.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkMultiChannelHistogramRegistrationFunctional.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkMultiChannelHistogramRegistrationFunctionalMetricData.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkMultiChannelRMIRegistrationFunctional.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkMultiChannelRMIRegistrationFunctionalMetricData.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkMultiChannelRegistrationFunctional.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkReformatVolume.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkReformatVolumeJacobian.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkReformatVolumePlain.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkReformatVolumeReformat.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkSplineWarpCongealingFunctional.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkSplineWarpGroupwiseRegistrationRMIFunctional.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkSplineWarpMultiChannelIntensityCorrectionRegistrationFunctional.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkSplineWarpMultiChannelRegistrationFunctional.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkSplineWarpMultiChannelRegistrationFunctionalThreadFunctions.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkVoxelMatchingMetric.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/libcmtkSegmentation.so -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/libcmtkSegmentation.so" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkAtlasSegmentation.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkDetectPhantomMagphanEMR051.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkEntropyMinimizationIntensityCorrectionFunctional.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkEntropyMinimizationIntensityCorrectionFunctionalBase.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkLabelCombinationLocalBinaryShapeBasedAveraging.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkLabelCombinationLocalShapeBasedAveraging.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkLabelCombinationLocalVoting.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkLabelCombinationLocalWeighting.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkLabelCombinationMultiClassSTAPLE.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkLabelCombinationSTAPLE.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkLabelCombinationShapeBasedAveraging.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkLabelCombinationShapeBasedAveragingInterpolation.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkLabelCombinationVoting.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkLeastSquaresPolynomialIntensityBiasField.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkMultiChannelEntropyMinimizationIntensityCorrectionFunctional.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkOverlapMeasures.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkSimpleLevelset.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkSimpleLevelsetCommandLine.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkSimpleLevelsetCommandLineBase.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkSphereDetectionBipolarMatchedFilterFFT.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkSphereDetectionNormalizedBipolarMatchedFilterFFT.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/doxygen.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkEntropyMinimizationIntensityCorrectionFunctional.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/libcmtkRecon.so -- Set runtime path of "/build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/libcmtkRecon.so" to "/usr/lib/cmtk" -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Recon/cmtkDeblurringVolumeReconstruction.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Recon/cmtkInverseInterpolationVolumeReconstruction.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Recon/cmtkInverseInterpolationVolumeReconstructionBase.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Recon/cmtkPointSpreadFunctionBox.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Recon/cmtkPointSpreadFunctionGaussian.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Recon/cmtkVolumeInjectionReconstruction.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Recon/doxygen.h -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Recon/cmtkDeblurringVolumeReconstruction.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Recon/cmtkInverseInterpolationVolumeReconstruction.txx -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/cmtk_functions.sh -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/cmtk_locking.sh -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/cmtk_locking_procmail.sh -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/iterative_shape_averaging -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/correct_nex_motion -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/groupwise_reformat -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/correct_dwi_distortion -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/correct_dwi_distortion_and_motion -- Installing: /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/bin/cmtk make[2]: Leaving directory '/build/cmtk-3.3.1p1+dfsg/obj-i686-linux-gnu' : # Remove not needed headers, cmake files etc rm -fr /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include /usr/bin/find /build/cmtk-3.3.1p1+dfsg/debian/cmtk -iname *.cmake -delete /usr/bin/find: paths must precede expression: `cmtkConfigureCPack.cmake' /usr/bin/find: possible unquoted pattern after predicate `-iname'? make[1]: [debian/rules:72: override_dh_auto_install] Error 1 (ignored) : # Prune duplicate docs rm -fr /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/share/cmtk/doc : # Generate manpages xvfb-run --auto-servernum --server-num=20 \ scripts/gen_manpages \ || dpkg -l xvfb | awk '/xvfb/{print ;}' | grep -q ubuntu ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/cmtk_functions.sh: 37: .: cannot open /usr/lib/cmtk/bin/cmtk_locking.sh: No such file Manpage for /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/cmtk_functions.sh -- FAILED ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/correct_dwi_distortion: 34: .: cannot open /usr/lib/cmtk/bin/cmtk_functions.sh: No such file Manpage for /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/correct_dwi_distortion -- FAILED ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/correct_dwi_distortion_and_motion: 34: .: cannot open /usr/lib/cmtk/bin/cmtk_functions.sh: No such file Manpage for /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/correct_dwi_distortion_and_motion -- FAILED ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/correct_nex_motion: 36: .: cannot open /usr/lib/cmtk/bin/cmtk_functions.sh: No such file Manpage for /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/correct_nex_motion -- FAILED ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/groupwise_reformat: 36: .: cannot open /usr/lib/cmtk/bin/cmtk_functions.sh: No such file Manpage for /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/groupwise_reformat -- FAILED ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/iterative_shape_averaging: line 34: /usr/lib/cmtk/bin/cmtk_functions.sh: No such file or directory Manpage for /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/iterative_shape_averaging -- FAILED ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. : # Above condition just to ignore unclean exit from xvfb on elderly broken ubuntus : # Cleaner solution patches are welcome! make[1]: Leaving directory '/build/cmtk-3.3.1p1+dfsg' dh_install cp --reflink=auto -a ./debian/cmtk.sh debian/cmtk/etc/cmtk/ install -d debian/.debhelper/generated/cmtk dh_installdocs install -d debian/cmtk/usr/share/doc/cmtk cp --reflink=auto -a ./README.txt debian/cmtk/usr/share/doc/cmtk cd './debian/upstream/..' && find 'upstream' \( -type f -or -type l \) -and ! -empty -print0 | LC_ALL=C sort -z | xargs -0 -I {} cp --reflink=auto --parents -dp {} /build/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/share/doc/cmtk chown -R 0:0 debian/cmtk/usr/share/doc chmod -R u\+rw,go=rX debian/cmtk/usr/share/doc install -p -m0644 debian/README.Debian debian/cmtk/usr/share/doc/cmtk/README.Debian install -p -m0644 debian/TODO debian/cmtk/usr/share/doc/cmtk/TODO.Debian install -p -m0644 debian/copyright debian/cmtk/usr/share/doc/cmtk/copyright dh_installchangelogs install -p -m0644 debian/changelog debian/cmtk/usr/share/doc/cmtk/changelog.Debian install -p -m0644 ./CHANGELOG debian/cmtk/usr/share/doc/cmtk/changelog rm -f debian/cmtk.debhelper.log debian/rules override_dh_installman make[1]: Entering directory '/build/cmtk-3.3.1p1+dfsg' dh_installman debian/manpages/* install -d debian/cmtk/usr/share/man/man1/ install -p -m0644 debian/manpages/cmtk-asegment.1 debian/cmtk/usr/share/man/man1/cmtk-asegment.1 install -p -m0644 debian/manpages/cmtk-asegment_sri24.1 debian/cmtk/usr/share/man/man1/cmtk-asegment_sri24.1 install -p -m0644 debian/manpages/cmtk-average_affine.1 debian/cmtk/usr/share/man/man1/cmtk-average_affine.1 install -p -m0644 debian/manpages/cmtk-average_images.1 debian/cmtk/usr/share/man/man1/cmtk-average_images.1 install -p -m0644 debian/manpages/cmtk-average_labels.1 debian/cmtk/usr/share/man/man1/cmtk-average_labels.1 install -p -m0644 debian/manpages/cmtk-avg_adm.1 debian/cmtk/usr/share/man/man1/cmtk-avg_adm.1 install -p -m0644 debian/manpages/cmtk-concat_affine.1 debian/cmtk/usr/share/man/man1/cmtk-concat_affine.1 install -p -m0644 debian/manpages/cmtk-convert_warp.1 debian/cmtk/usr/share/man/man1/cmtk-convert_warp.1 install -p -m0644 debian/manpages/cmtk-convertx.1 debian/cmtk/usr/share/man/man1/cmtk-convertx.1 install -p -m0644 debian/manpages/cmtk-dbtool.1 debian/cmtk/usr/share/man/man1/cmtk-dbtool.1 install -p -m0644 debian/manpages/cmtk-dcm2image.1 debian/cmtk/usr/share/man/man1/cmtk-dcm2image.1 install -p -m0644 debian/manpages/cmtk-describe.1 debian/cmtk/usr/share/man/man1/cmtk-describe.1 install -p -m0644 debian/manpages/cmtk-destripe.1 debian/cmtk/usr/share/man/man1/cmtk-destripe.1 install -p -m0644 debian/manpages/cmtk-detect_adni_phantom.1 debian/cmtk/usr/share/man/man1/cmtk-detect_adni_phantom.1 install -p -m0644 debian/manpages/cmtk-detect_spheres_matched_filter.1 debian/cmtk/usr/share/man/man1/cmtk-detect_spheres_matched_filter.1 install -p -m0644 debian/manpages/cmtk-dof2mat.1 debian/cmtk/usr/share/man/man1/cmtk-dof2mat.1 install -p -m0644 debian/manpages/cmtk-dwi_mask_bad_slices.1 debian/cmtk/usr/share/man/man1/cmtk-dwi_mask_bad_slices.1 install -p -m0644 debian/manpages/cmtk-epiunwarp.1 debian/cmtk/usr/share/man/man1/cmtk-epiunwarp.1 install -p -m0644 debian/manpages/cmtk-fib2image.1 debian/cmtk/usr/share/man/man1/cmtk-fib2image.1 install -p -m0644 debian/manpages/cmtk-fibxform.1 debian/cmtk/usr/share/man/man1/cmtk-fibxform.1 install -p -m0644 debian/manpages/cmtk-film.1 debian/cmtk/usr/share/man/man1/cmtk-film.1 install -p -m0644 debian/manpages/cmtk-filter.1 debian/cmtk/usr/share/man/man1/cmtk-filter.1 install -p -m0644 debian/manpages/cmtk-fit_affine_dfield.1 debian/cmtk/usr/share/man/man1/cmtk-fit_affine_dfield.1 install -p -m0644 debian/manpages/cmtk-fit_affine_xform.1 debian/cmtk/usr/share/man/man1/cmtk-fit_affine_xform.1 install -p -m0644 debian/manpages/cmtk-fit_affine_xform_landmarks.1 debian/cmtk/usr/share/man/man1/cmtk-fit_affine_xform_landmarks.1 install -p -m0644 debian/manpages/cmtk-fit_spline_dfield.1 debian/cmtk/usr/share/man/man1/cmtk-fit_spline_dfield.1 install -p -m0644 debian/manpages/cmtk-fit_spline_xform.1 debian/cmtk/usr/share/man/man1/cmtk-fit_spline_xform.1 install -p -m0644 debian/manpages/cmtk-geomatch.1 debian/cmtk/usr/share/man/man1/cmtk-geomatch.1 install -p -m0644 debian/manpages/cmtk-glm.1 debian/cmtk/usr/share/man/man1/cmtk-glm.1 install -p -m0644 debian/manpages/cmtk-gmm.1 debian/cmtk/usr/share/man/man1/cmtk-gmm.1 install -p -m0644 debian/manpages/cmtk-gregxform.1 debian/cmtk/usr/share/man/man1/cmtk-gregxform.1 install -p -m0644 debian/manpages/cmtk-groupwise_affine.1 debian/cmtk/usr/share/man/man1/cmtk-groupwise_affine.1 install -p -m0644 debian/manpages/cmtk-groupwise_init.1 debian/cmtk/usr/share/man/man1/cmtk-groupwise_init.1 install -p -m0644 debian/manpages/cmtk-groupwise_warp.1 debian/cmtk/usr/share/man/man1/cmtk-groupwise_warp.1 install -p -m0644 debian/manpages/cmtk-hausdorff.1 debian/cmtk/usr/share/man/man1/cmtk-hausdorff.1 install -p -m0644 debian/manpages/cmtk-histogram.1 debian/cmtk/usr/share/man/man1/cmtk-histogram.1 install -p -m0644 debian/manpages/cmtk-imagemath.1 debian/cmtk/usr/share/man/man1/cmtk-imagemath.1 install -p -m0644 debian/manpages/cmtk-interleaved_bad_slices.1 debian/cmtk/usr/share/man/man1/cmtk-interleaved_bad_slices.1 install -p -m0644 debian/manpages/cmtk-iterative_shape_averaging.1 debian/cmtk/usr/share/man/man1/cmtk-iterative_shape_averaging.1 install -p -m0644 debian/manpages/cmtk-jidb.1 debian/cmtk/usr/share/man/man1/cmtk-jidb.1 install -p -m0644 debian/manpages/cmtk-levelset.1 debian/cmtk/usr/share/man/man1/cmtk-levelset.1 install -p -m0644 debian/manpages/cmtk-lmsba.1 debian/cmtk/usr/share/man/man1/cmtk-lmsba.1 install -p -m0644 debian/manpages/cmtk-lsba.1 debian/cmtk/usr/share/man/man1/cmtk-lsba.1 install -p -m0644 debian/manpages/cmtk-lvote.1 debian/cmtk/usr/share/man/man1/cmtk-lvote.1 install -p -m0644 debian/manpages/cmtk-make_initial_affine.1 debian/cmtk/usr/share/man/man1/cmtk-make_initial_affine.1 install -p -m0644 debian/manpages/cmtk-mat2dof.1 debian/cmtk/usr/share/man/man1/cmtk-mat2dof.1 install -p -m0644 debian/manpages/cmtk-mcaffine.1 debian/cmtk/usr/share/man/man1/cmtk-mcaffine.1 install -p -m0644 debian/manpages/cmtk-mcwarp.1 debian/cmtk/usr/share/man/man1/cmtk-mcwarp.1 install -p -m0644 debian/manpages/cmtk-mk_adni_phantom.1 debian/cmtk/usr/share/man/man1/cmtk-mk_adni_phantom.1 install -p -m0644 debian/manpages/cmtk-mk_analyze_hdr.1 debian/cmtk/usr/share/man/man1/cmtk-mk_analyze_hdr.1 install -p -m0644 debian/manpages/cmtk-mk_nifti_hdr.1 debian/cmtk/usr/share/man/man1/cmtk-mk_nifti_hdr.1 install -p -m0644 debian/manpages/cmtk-mk_phantom_3d.1 debian/cmtk/usr/share/man/man1/cmtk-mk_phantom_3d.1 install -p -m0644 debian/manpages/cmtk-mrbias.1 debian/cmtk/usr/share/man/man1/cmtk-mrbias.1 install -p -m0644 debian/manpages/cmtk-overlap.1 debian/cmtk/usr/share/man/man1/cmtk-overlap.1 install -p -m0644 debian/manpages/cmtk-probe.1 debian/cmtk/usr/share/man/man1/cmtk-probe.1 install -p -m0644 debian/manpages/cmtk-pxsearch.1 debian/cmtk/usr/share/man/man1/cmtk-pxsearch.1 install -p -m0644 debian/manpages/cmtk-reformatx.1 debian/cmtk/usr/share/man/man1/cmtk-reformatx.1 install -p -m0644 debian/manpages/cmtk-registration.1 debian/cmtk/usr/share/man/man1/cmtk-registration.1 install -p -m0644 debian/manpages/cmtk-registrationx.1 debian/cmtk/usr/share/man/man1/cmtk-registrationx.1 install -p -m0644 debian/manpages/cmtk-regress.1 debian/cmtk/usr/share/man/man1/cmtk-regress.1 install -p -m0644 debian/manpages/cmtk-reorient.1 debian/cmtk/usr/share/man/man1/cmtk-reorient.1 install -p -m0644 debian/manpages/cmtk-sba.1 debian/cmtk/usr/share/man/man1/cmtk-sba.1 install -p -m0644 debian/manpages/cmtk-sbai.1 debian/cmtk/usr/share/man/man1/cmtk-sbai.1 install -p -m0644 debian/manpages/cmtk-sequence.1 debian/cmtk/usr/share/man/man1/cmtk-sequence.1 install -p -m0644 debian/manpages/cmtk-similarity.1 debian/cmtk/usr/share/man/man1/cmtk-similarity.1 install -p -m0644 debian/manpages/cmtk-split.1 debian/cmtk/usr/share/man/man1/cmtk-split.1 install -p -m0644 debian/manpages/cmtk-statistics.1 debian/cmtk/usr/share/man/man1/cmtk-statistics.1 install -p -m0644 debian/manpages/cmtk-stream_pixels.1 debian/cmtk/usr/share/man/man1/cmtk-stream_pixels.1 install -p -m0644 debian/manpages/cmtk-streamxform.1 debian/cmtk/usr/share/man/man1/cmtk-streamxform.1 install -p -m0644 debian/manpages/cmtk-sympl.1 debian/cmtk/usr/share/man/man1/cmtk-sympl.1 install -p -m0644 debian/manpages/cmtk-symplx.1 debian/cmtk/usr/share/man/man1/cmtk-symplx.1 install -p -m0644 debian/manpages/cmtk-ttest.1 debian/cmtk/usr/share/man/man1/cmtk-ttest.1 install -p -m0644 debian/manpages/cmtk-unsplit.1 debian/cmtk/usr/share/man/man1/cmtk-unsplit.1 install -p -m0644 debian/manpages/cmtk-unwarp_image_phantom.1 debian/cmtk/usr/share/man/man1/cmtk-unwarp_image_phantom.1 install -p -m0644 debian/manpages/cmtk-vol2csv.1 debian/cmtk/usr/share/man/man1/cmtk-vol2csv.1 install -p -m0644 debian/manpages/cmtk-volume_injection.1 debian/cmtk/usr/share/man/man1/cmtk-volume_injection.1 install -p -m0644 debian/manpages/cmtk-volume_reconstruction.1 debian/cmtk/usr/share/man/man1/cmtk-volume_reconstruction.1 install -p -m0644 debian/manpages/cmtk-vtkxform.1 debian/cmtk/usr/share/man/man1/cmtk-vtkxform.1 install -p -m0644 debian/manpages/cmtk-warp.1 debian/cmtk/usr/share/man/man1/cmtk-warp.1 install -p -m0644 debian/manpages/cmtk-warp2ps.1 debian/cmtk/usr/share/man/man1/cmtk-warp2ps.1 install -p -m0644 debian/manpages/cmtk-warpx.1 debian/cmtk/usr/share/man/man1/cmtk-warpx.1 install -p -m0644 debian/manpages/cmtk-xform2dfield.1 debian/cmtk/usr/share/man/man1/cmtk-xform2dfield.1 install -p -m0644 debian/manpages/cmtk-xform2itk.1 debian/cmtk/usr/share/man/man1/cmtk-xform2itk.1 install -p -m0644 debian/manpages/cmtk-xform2scalar.1 debian/cmtk/usr/share/man/man1/cmtk-xform2scalar.1 install -p -m0644 debian/manpages/cmtk.1 debian/cmtk/usr/share/man/man1/cmtk.1 man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-asegment.1 debian/cmtk/usr/share/man/man1/cmtk-asegment_sri24.1 debian/cmtk/usr/share/man/man1/cmtk-average_affine.1 debian/cmtk/usr/share/man/man1/cmtk-average_images.1 debian/cmtk/usr/share/man/man1/cmtk-average_labels.1 debian/cmtk/usr/share/man/man1/cmtk-avg_adm.1 man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-concat_affine.1 debian/cmtk/usr/share/man/man1/cmtk-convert_warp.1 debian/cmtk/usr/share/man/man1/cmtk-convertx.1 debian/cmtk/usr/share/man/man1/cmtk-dbtool.1 debian/cmtk/usr/share/man/man1/cmtk-dcm2image.1 debian/cmtk/usr/share/man/man1/cmtk-describe.1 man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-destripe.1 debian/cmtk/usr/share/man/man1/cmtk-detect_adni_phantom.1 debian/cmtk/usr/share/man/man1/cmtk-detect_spheres_matched_filter.1 debian/cmtk/usr/share/man/man1/cmtk-dof2mat.1 debian/cmtk/usr/share/man/man1/cmtk-dwi_mask_bad_slices.1 debian/cmtk/usr/share/man/man1/cmtk-epiunwarp.1 man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-fib2image.1 debian/cmtk/usr/share/man/man1/cmtk-fibxform.1 debian/cmtk/usr/share/man/man1/cmtk-film.1 debian/cmtk/usr/share/man/man1/cmtk-filter.1 debian/cmtk/usr/share/man/man1/cmtk-fit_affine_dfield.1 debian/cmtk/usr/share/man/man1/cmtk-fit_affine_xform.1 man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-fit_affine_xform_landmarks.1 debian/cmtk/usr/share/man/man1/cmtk-fit_spline_dfield.1 debian/cmtk/usr/share/man/man1/cmtk-fit_spline_xform.1 debian/cmtk/usr/share/man/man1/cmtk-geomatch.1 debian/cmtk/usr/share/man/man1/cmtk-glm.1 debian/cmtk/usr/share/man/man1/cmtk-gmm.1 man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-gregxform.1 debian/cmtk/usr/share/man/man1/cmtk-groupwise_affine.1 debian/cmtk/usr/share/man/man1/cmtk-groupwise_init.1 debian/cmtk/usr/share/man/man1/cmtk-groupwise_warp.1 debian/cmtk/usr/share/man/man1/cmtk-hausdorff.1 debian/cmtk/usr/share/man/man1/cmtk-histogram.1 man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-imagemath.1 debian/cmtk/usr/share/man/man1/cmtk-interleaved_bad_slices.1 debian/cmtk/usr/share/man/man1/cmtk-iterative_shape_averaging.1 debian/cmtk/usr/share/man/man1/cmtk-jidb.1 debian/cmtk/usr/share/man/man1/cmtk-levelset.1 debian/cmtk/usr/share/man/man1/cmtk-lmsba.1 man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-lsba.1 debian/cmtk/usr/share/man/man1/cmtk-lvote.1 debian/cmtk/usr/share/man/man1/cmtk-make_initial_affine.1 debian/cmtk/usr/share/man/man1/cmtk-mat2dof.1 debian/cmtk/usr/share/man/man1/cmtk-mcaffine.1 debian/cmtk/usr/share/man/man1/cmtk-mcwarp.1 man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-mk_adni_phantom.1 debian/cmtk/usr/share/man/man1/cmtk-mk_analyze_hdr.1 debian/cmtk/usr/share/man/man1/cmtk-mk_nifti_hdr.1 debian/cmtk/usr/share/man/man1/cmtk-mk_phantom_3d.1 debian/cmtk/usr/share/man/man1/cmtk-mrbias.1 debian/cmtk/usr/share/man/man1/cmtk-overlap.1 man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-probe.1 debian/cmtk/usr/share/man/man1/cmtk-pxsearch.1 debian/cmtk/usr/share/man/man1/cmtk-reformatx.1 debian/cmtk/usr/share/man/man1/cmtk-registration.1 debian/cmtk/usr/share/man/man1/cmtk-registrationx.1 debian/cmtk/usr/share/man/man1/cmtk-regress.1 man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-reorient.1 debian/cmtk/usr/share/man/man1/cmtk-sba.1 debian/cmtk/usr/share/man/man1/cmtk-sbai.1 debian/cmtk/usr/share/man/man1/cmtk-sequence.1 debian/cmtk/usr/share/man/man1/cmtk-similarity.1 debian/cmtk/usr/share/man/man1/cmtk-split.1 man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-statistics.1 debian/cmtk/usr/share/man/man1/cmtk-stream_pixels.1 debian/cmtk/usr/share/man/man1/cmtk-streamxform.1 debian/cmtk/usr/share/man/man1/cmtk-sympl.1 debian/cmtk/usr/share/man/man1/cmtk-symplx.1 debian/cmtk/usr/share/man/man1/cmtk-ttest.1 man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-warp.1 debian/cmtk/usr/share/man/man1/cmtk-warp2ps.1 debian/cmtk/usr/share/man/man1/cmtk-warpx.1 debian/cmtk/usr/share/man/man1/cmtk-xform2dfield.1 debian/cmtk/usr/share/man/man1/cmtk-xform2itk.1 debian/cmtk/usr/share/man/man1/cmtk-xform2scalar.1 man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-unsplit.1 debian/cmtk/usr/share/man/man1/cmtk-unwarp_image_phantom.1 debian/cmtk/usr/share/man/man1/cmtk-vol2csv.1 debian/cmtk/usr/share/man/man1/cmtk-volume_injection.1 debian/cmtk/usr/share/man/man1/cmtk-volume_reconstruction.1 debian/cmtk/usr/share/man/man1/cmtk-vtkxform.1 man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk.1 mv debian/cmtk/usr/share/man/man1/cmtk.1.dh-new debian/cmtk/usr/share/man/man1/cmtk.1 chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk.1 mv debian/cmtk/usr/share/man/man1/cmtk-fit_affine_xform_landmarks.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-fit_affine_xform_landmarks.1 mv debian/cmtk/usr/share/man/man1/cmtk-fit_spline_dfield.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-fit_spline_dfield.1 mv debian/cmtk/usr/share/man/man1/cmtk-fit_spline_xform.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-fit_spline_xform.1 mv debian/cmtk/usr/share/man/man1/cmtk-geomatch.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-geomatch.1 mv debian/cmtk/usr/share/man/man1/cmtk-glm.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-glm.1 mv debian/cmtk/usr/share/man/man1/cmtk-gmm.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-gmm.1 chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-fit_affine_xform_landmarks.1 debian/cmtk/usr/share/man/man1/cmtk-fit_spline_dfield.1 debian/cmtk/usr/share/man/man1/cmtk-fit_spline_xform.1 debian/cmtk/usr/share/man/man1/cmtk-geomatch.1 debian/cmtk/usr/share/man/man1/cmtk-glm.1 debian/cmtk/usr/share/man/man1/cmtk-gmm.1 mv debian/cmtk/usr/share/man/man1/cmtk-asegment.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-asegment.1 mv debian/cmtk/usr/share/man/man1/cmtk-asegment_sri24.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-asegment_sri24.1 mv debian/cmtk/usr/share/man/man1/cmtk-average_affine.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-average_affine.1 mv debian/cmtk/usr/share/man/man1/cmtk-average_images.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-average_images.1 mv debian/cmtk/usr/share/man/man1/cmtk-average_labels.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-average_labels.1 mv debian/cmtk/usr/share/man/man1/cmtk-avg_adm.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-avg_adm.1 chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-asegment.1 debian/cmtk/usr/share/man/man1/cmtk-asegment_sri24.1 debian/cmtk/usr/share/man/man1/cmtk-average_affine.1 debian/cmtk/usr/share/man/man1/cmtk-average_images.1 debian/cmtk/usr/share/man/man1/cmtk-average_labels.1 debian/cmtk/usr/share/man/man1/cmtk-avg_adm.1 mv debian/cmtk/usr/share/man/man1/cmtk-concat_affine.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-concat_affine.1 mv debian/cmtk/usr/share/man/man1/cmtk-convert_warp.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-convert_warp.1 mv debian/cmtk/usr/share/man/man1/cmtk-convertx.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-convertx.1 mv debian/cmtk/usr/share/man/man1/cmtk-dbtool.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-dbtool.1 mv debian/cmtk/usr/share/man/man1/cmtk-dcm2image.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-dcm2image.1 mv debian/cmtk/usr/share/man/man1/cmtk-describe.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-describe.1 chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-concat_affine.1 debian/cmtk/usr/share/man/man1/cmtk-convert_warp.1 debian/cmtk/usr/share/man/man1/cmtk-convertx.1 debian/cmtk/usr/share/man/man1/cmtk-dbtool.1 debian/cmtk/usr/share/man/man1/cmtk-dcm2image.1 debian/cmtk/usr/share/man/man1/cmtk-describe.1 mv debian/cmtk/usr/share/man/man1/cmtk-fib2image.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-fib2image.1 mv debian/cmtk/usr/share/man/man1/cmtk-fibxform.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-fibxform.1 mv debian/cmtk/usr/share/man/man1/cmtk-film.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-film.1 mv debian/cmtk/usr/share/man/man1/cmtk-filter.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-filter.1 mv debian/cmtk/usr/share/man/man1/cmtk-fit_affine_dfield.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-fit_affine_dfield.1 mv debian/cmtk/usr/share/man/man1/cmtk-fit_affine_xform.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-fit_affine_xform.1 chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-fib2image.1 debian/cmtk/usr/share/man/man1/cmtk-fibxform.1 debian/cmtk/usr/share/man/man1/cmtk-film.1 debian/cmtk/usr/share/man/man1/cmtk-filter.1 debian/cmtk/usr/share/man/man1/cmtk-fit_affine_dfield.1 debian/cmtk/usr/share/man/man1/cmtk-fit_affine_xform.1 mv debian/cmtk/usr/share/man/man1/cmtk-destripe.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-destripe.1 mv debian/cmtk/usr/share/man/man1/cmtk-detect_adni_phantom.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-detect_adni_phantom.1 mv debian/cmtk/usr/share/man/man1/cmtk-detect_spheres_matched_filter.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-detect_spheres_matched_filter.1 mv debian/cmtk/usr/share/man/man1/cmtk-dof2mat.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-dof2mat.1 mv debian/cmtk/usr/share/man/man1/cmtk-dwi_mask_bad_slices.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-dwi_mask_bad_slices.1 mv debian/cmtk/usr/share/man/man1/cmtk-epiunwarp.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-epiunwarp.1 chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-destripe.1 debian/cmtk/usr/share/man/man1/cmtk-detect_adni_phantom.1 debian/cmtk/usr/share/man/man1/cmtk-detect_spheres_matched_filter.1 debian/cmtk/usr/share/man/man1/cmtk-dof2mat.1 debian/cmtk/usr/share/man/man1/cmtk-dwi_mask_bad_slices.1 debian/cmtk/usr/share/man/man1/cmtk-epiunwarp.1 mv debian/cmtk/usr/share/man/man1/cmtk-gregxform.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-gregxform.1 mv debian/cmtk/usr/share/man/man1/cmtk-groupwise_affine.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-groupwise_affine.1 mv debian/cmtk/usr/share/man/man1/cmtk-groupwise_init.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-groupwise_init.1 mv debian/cmtk/usr/share/man/man1/cmtk-groupwise_warp.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-groupwise_warp.1 mv debian/cmtk/usr/share/man/man1/cmtk-hausdorff.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-hausdorff.1 mv debian/cmtk/usr/share/man/man1/cmtk-histogram.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-histogram.1 chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-gregxform.1 debian/cmtk/usr/share/man/man1/cmtk-groupwise_affine.1 debian/cmtk/usr/share/man/man1/cmtk-groupwise_init.1 debian/cmtk/usr/share/man/man1/cmtk-groupwise_warp.1 debian/cmtk/usr/share/man/man1/cmtk-hausdorff.1 debian/cmtk/usr/share/man/man1/cmtk-histogram.1 mv debian/cmtk/usr/share/man/man1/cmtk-statistics.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-statistics.1 mv debian/cmtk/usr/share/man/man1/cmtk-stream_pixels.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-stream_pixels.1 mv debian/cmtk/usr/share/man/man1/cmtk-streamxform.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-streamxform.1 mv debian/cmtk/usr/share/man/man1/cmtk-sympl.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-sympl.1 mv debian/cmtk/usr/share/man/man1/cmtk-symplx.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-symplx.1 mv debian/cmtk/usr/share/man/man1/cmtk-ttest.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-ttest.1 chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-statistics.1 debian/cmtk/usr/share/man/man1/cmtk-stream_pixels.1 debian/cmtk/usr/share/man/man1/cmtk-streamxform.1 debian/cmtk/usr/share/man/man1/cmtk-sympl.1 debian/cmtk/usr/share/man/man1/cmtk-symplx.1 debian/cmtk/usr/share/man/man1/cmtk-ttest.1 mv debian/cmtk/usr/share/man/man1/cmtk-mk_adni_phantom.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-mk_adni_phantom.1 mv debian/cmtk/usr/share/man/man1/cmtk-mk_analyze_hdr.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-mk_analyze_hdr.1 mv debian/cmtk/usr/share/man/man1/cmtk-mk_nifti_hdr.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-mk_nifti_hdr.1 mv debian/cmtk/usr/share/man/man1/cmtk-mk_phantom_3d.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-mk_phantom_3d.1 mv debian/cmtk/usr/share/man/man1/cmtk-mrbias.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-mrbias.1 mv debian/cmtk/usr/share/man/man1/cmtk-overlap.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-overlap.1 chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-mk_adni_phantom.1 debian/cmtk/usr/share/man/man1/cmtk-mk_analyze_hdr.1 debian/cmtk/usr/share/man/man1/cmtk-mk_nifti_hdr.1 debian/cmtk/usr/share/man/man1/cmtk-mk_phantom_3d.1 debian/cmtk/usr/share/man/man1/cmtk-mrbias.1 debian/cmtk/usr/share/man/man1/cmtk-overlap.1 mv debian/cmtk/usr/share/man/man1/cmtk-imagemath.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-imagemath.1 mv debian/cmtk/usr/share/man/man1/cmtk-interleaved_bad_slices.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-interleaved_bad_slices.1 mv debian/cmtk/usr/share/man/man1/cmtk-iterative_shape_averaging.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-iterative_shape_averaging.1 mv debian/cmtk/usr/share/man/man1/cmtk-jidb.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-jidb.1 mv debian/cmtk/usr/share/man/man1/cmtk-levelset.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-levelset.1 mv debian/cmtk/usr/share/man/man1/cmtk-lmsba.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-lmsba.1 chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-imagemath.1 debian/cmtk/usr/share/man/man1/cmtk-interleaved_bad_slices.1 debian/cmtk/usr/share/man/man1/cmtk-iterative_shape_averaging.1 debian/cmtk/usr/share/man/man1/cmtk-jidb.1 debian/cmtk/usr/share/man/man1/cmtk-levelset.1 debian/cmtk/usr/share/man/man1/cmtk-lmsba.1 mv debian/cmtk/usr/share/man/man1/cmtk-warp.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-warp.1 mv debian/cmtk/usr/share/man/man1/cmtk-warp2ps.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-warp2ps.1 mv debian/cmtk/usr/share/man/man1/cmtk-warpx.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-warpx.1 mv debian/cmtk/usr/share/man/man1/cmtk-xform2dfield.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-xform2dfield.1 mv debian/cmtk/usr/share/man/man1/cmtk-xform2itk.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-xform2itk.1 mv debian/cmtk/usr/share/man/man1/cmtk-xform2scalar.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-xform2scalar.1 chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-warp.1 debian/cmtk/usr/share/man/man1/cmtk-warp2ps.1 debian/cmtk/usr/share/man/man1/cmtk-warpx.1 debian/cmtk/usr/share/man/man1/cmtk-xform2dfield.1 debian/cmtk/usr/share/man/man1/cmtk-xform2itk.1 debian/cmtk/usr/share/man/man1/cmtk-xform2scalar.1 mv debian/cmtk/usr/share/man/man1/cmtk-probe.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-probe.1 mv debian/cmtk/usr/share/man/man1/cmtk-pxsearch.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-pxsearch.1 mv debian/cmtk/usr/share/man/man1/cmtk-reformatx.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-reformatx.1 mv debian/cmtk/usr/share/man/man1/cmtk-registration.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-registration.1 mv debian/cmtk/usr/share/man/man1/cmtk-registrationx.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-registrationx.1 mv debian/cmtk/usr/share/man/man1/cmtk-regress.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-regress.1 chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-probe.1 debian/cmtk/usr/share/man/man1/cmtk-pxsearch.1 debian/cmtk/usr/share/man/man1/cmtk-reformatx.1 debian/cmtk/usr/share/man/man1/cmtk-registration.1 debian/cmtk/usr/share/man/man1/cmtk-registrationx.1 debian/cmtk/usr/share/man/man1/cmtk-regress.1 mv debian/cmtk/usr/share/man/man1/cmtk-reorient.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-reorient.1 mv debian/cmtk/usr/share/man/man1/cmtk-sba.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-sba.1 mv debian/cmtk/usr/share/man/man1/cmtk-sbai.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-sbai.1 mv debian/cmtk/usr/share/man/man1/cmtk-sequence.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-sequence.1 mv debian/cmtk/usr/share/man/man1/cmtk-similarity.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-similarity.1 mv debian/cmtk/usr/share/man/man1/cmtk-split.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-split.1 chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-reorient.1 debian/cmtk/usr/share/man/man1/cmtk-sba.1 debian/cmtk/usr/share/man/man1/cmtk-sbai.1 debian/cmtk/usr/share/man/man1/cmtk-sequence.1 debian/cmtk/usr/share/man/man1/cmtk-similarity.1 debian/cmtk/usr/share/man/man1/cmtk-split.1 mv debian/cmtk/usr/share/man/man1/cmtk-lsba.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-lsba.1 mv debian/cmtk/usr/share/man/man1/cmtk-lvote.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-lvote.1 mv debian/cmtk/usr/share/man/man1/cmtk-make_initial_affine.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-make_initial_affine.1 mv debian/cmtk/usr/share/man/man1/cmtk-mat2dof.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-mat2dof.1 mv debian/cmtk/usr/share/man/man1/cmtk-mcaffine.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-mcaffine.1 mv debian/cmtk/usr/share/man/man1/cmtk-mcwarp.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-mcwarp.1 chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-lsba.1 debian/cmtk/usr/share/man/man1/cmtk-lvote.1 debian/cmtk/usr/share/man/man1/cmtk-make_initial_affine.1 debian/cmtk/usr/share/man/man1/cmtk-mat2dof.1 debian/cmtk/usr/share/man/man1/cmtk-mcaffine.1 debian/cmtk/usr/share/man/man1/cmtk-mcwarp.1 mv debian/cmtk/usr/share/man/man1/cmtk-unsplit.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-unsplit.1 mv debian/cmtk/usr/share/man/man1/cmtk-unwarp_image_phantom.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-unwarp_image_phantom.1 mv debian/cmtk/usr/share/man/man1/cmtk-vol2csv.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-vol2csv.1 mv debian/cmtk/usr/share/man/man1/cmtk-volume_injection.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-volume_injection.1 mv debian/cmtk/usr/share/man/man1/cmtk-volume_reconstruction.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-volume_reconstruction.1 mv debian/cmtk/usr/share/man/man1/cmtk-vtkxform.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-vtkxform.1 chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-unsplit.1 debian/cmtk/usr/share/man/man1/cmtk-unwarp_image_phantom.1 debian/cmtk/usr/share/man/man1/cmtk-vol2csv.1 debian/cmtk/usr/share/man/man1/cmtk-volume_injection.1 debian/cmtk/usr/share/man/man1/cmtk-volume_reconstruction.1 debian/cmtk/usr/share/man/man1/cmtk-vtkxform.1 make[1]: Leaving directory '/build/cmtk-3.3.1p1+dfsg' dh_perl dh_link dh_strip_nondeterminism dh_compress cd debian/cmtk chmod a-x usr/share/doc/cmtk/changelog usr/share/doc/cmtk/changelog.Debian usr/share/man/man1/cmtk-asegment.1 usr/share/man/man1/cmtk-asegment_sri24.1 usr/share/man/man1/cmtk-average_affine.1 usr/share/man/man1/cmtk-average_images.1 usr/share/man/man1/cmtk-average_labels.1 usr/share/man/man1/cmtk-avg_adm.1 usr/share/man/man1/cmtk-concat_affine.1 usr/share/man/man1/cmtk-convert_warp.1 usr/share/man/man1/cmtk-convertx.1 usr/share/man/man1/cmtk-dbtool.1 usr/share/man/man1/cmtk-dcm2image.1 usr/share/man/man1/cmtk-describe.1 usr/share/man/man1/cmtk-destripe.1 usr/share/man/man1/cmtk-detect_adni_phantom.1 usr/share/man/man1/cmtk-detect_spheres_matched_filter.1 usr/share/man/man1/cmtk-dof2mat.1 usr/share/man/man1/cmtk-dwi_mask_bad_slices.1 usr/share/man/man1/cmtk-epiunwarp.1 usr/share/man/man1/cmtk-fib2image.1 usr/share/man/man1/cmtk-fibxform.1 usr/share/man/man1/cmtk-film.1 usr/share/man/man1/cmtk-filter.1 usr/share/man/man1/cmtk-fit_affine_dfield.1 usr/share/man/man1/cmtk-fit_affine_xform.1 usr/share/man/man1/cmtk-fit_affine_xform_landmarks.1 usr/share/man/man1/cmtk-fit_spline_dfield.1 usr/share/man/man1/cmtk-fit_spline_xform.1 usr/share/man/man1/cmtk-geomatch.1 usr/share/man/man1/cmtk-glm.1 usr/share/man/man1/cmtk-gmm.1 usr/share/man/man1/cmtk-gregxform.1 usr/share/man/man1/cmtk-groupwise_affine.1 usr/share/man/man1/cmtk-groupwise_init.1 usr/share/man/man1/cmtk-groupwise_warp.1 usr/share/man/man1/cmtk-hausdorff.1 usr/share/man/man1/cmtk-histogram.1 usr/share/man/man1/cmtk-imagemath.1 usr/share/man/man1/cmtk-interleaved_bad_slices.1 usr/share/man/man1/cmtk-iterative_shape_averaging.1 usr/share/man/man1/cmtk-jidb.1 usr/share/man/man1/cmtk-levelset.1 usr/share/man/man1/cmtk-lmsba.1 usr/share/man/man1/cmtk-lsba.1 usr/share/man/man1/cmtk-lvote.1 usr/share/man/man1/cmtk-make_initial_affine.1 usr/share/man/man1/cmtk-mat2dof.1 usr/share/man/man1/cmtk-mcaffine.1 usr/share/man/man1/cmtk-mcwarp.1 usr/share/man/man1/cmtk-mk_adni_phantom.1 usr/share/man/man1/cmtk-mk_analyze_hdr.1 usr/share/man/man1/cmtk-mk_nifti_hdr.1 usr/share/man/man1/cmtk-mk_phantom_3d.1 usr/share/man/man1/cmtk-mrbias.1 usr/share/man/man1/cmtk-overlap.1 usr/share/man/man1/cmtk-probe.1 usr/share/man/man1/cmtk-pxsearch.1 usr/share/man/man1/cmtk-reformatx.1 usr/share/man/man1/cmtk-registration.1 usr/share/man/man1/cmtk-registrationx.1 usr/share/man/man1/cmtk-regress.1 usr/share/man/man1/cmtk-reorient.1 usr/share/man/man1/cmtk-sba.1 usr/share/man/man1/cmtk-sbai.1 usr/share/man/man1/cmtk-sequence.1 usr/share/man/man1/cmtk-similarity.1 usr/share/man/man1/cmtk-split.1 usr/share/man/man1/cmtk-statistics.1 usr/share/man/man1/cmtk-stream_pixels.1 usr/share/man/man1/cmtk-streamxform.1 usr/share/man/man1/cmtk-sympl.1 usr/share/man/man1/cmtk-symplx.1 usr/share/man/man1/cmtk-ttest.1 usr/share/man/man1/cmtk-unsplit.1 usr/share/man/man1/cmtk-unwarp_image_phantom.1 usr/share/man/man1/cmtk-vol2csv.1 usr/share/man/man1/cmtk-volume_injection.1 usr/share/man/man1/cmtk-volume_reconstruction.1 usr/share/man/man1/cmtk-vtkxform.1 usr/share/man/man1/cmtk-warp.1 usr/share/man/man1/cmtk-warp2ps.1 usr/share/man/man1/cmtk-warpx.1 usr/share/man/man1/cmtk-xform2dfield.1 usr/share/man/man1/cmtk-xform2itk.1 usr/share/man/man1/cmtk-xform2scalar.1 usr/share/man/man1/cmtk.1 gzip -9nf usr/share/doc/cmtk/changelog usr/share/doc/cmtk/changelog.Debian usr/share/man/man1/cmtk-asegment.1 usr/share/man/man1/cmtk-asegment_sri24.1 usr/share/man/man1/cmtk-average_affine.1 usr/share/man/man1/cmtk-average_images.1 usr/share/man/man1/cmtk-average_labels.1 usr/share/man/man1/cmtk-avg_adm.1 usr/share/man/man1/cmtk-concat_affine.1 usr/share/man/man1/cmtk-convert_warp.1 usr/share/man/man1/cmtk-convertx.1 usr/share/man/man1/cmtk-dbtool.1 usr/share/man/man1/cmtk-dcm2image.1 usr/share/man/man1/cmtk-describe.1 usr/share/man/man1/cmtk-destripe.1 usr/share/man/man1/cmtk-detect_adni_phantom.1 usr/share/man/man1/cmtk-detect_spheres_matched_filter.1 usr/share/man/man1/cmtk-dof2mat.1 usr/share/man/man1/cmtk-dwi_mask_bad_slices.1 usr/share/man/man1/cmtk-epiunwarp.1 usr/share/man/man1/cmtk-fib2image.1 usr/share/man/man1/cmtk-fibxform.1 usr/share/man/man1/cmtk-film.1 usr/share/man/man1/cmtk-filter.1 usr/share/man/man1/cmtk-fit_affine_dfield.1 usr/share/man/man1/cmtk-fit_affine_xform.1 usr/share/man/man1/cmtk-fit_affine_xform_landmarks.1 usr/share/man/man1/cmtk-fit_spline_dfield.1 usr/share/man/man1/cmtk-fit_spline_xform.1 usr/share/man/man1/cmtk-geomatch.1 usr/share/man/man1/cmtk-glm.1 usr/share/man/man1/cmtk-gmm.1 usr/share/man/man1/cmtk-gregxform.1 usr/share/man/man1/cmtk-groupwise_affine.1 usr/share/man/man1/cmtk-groupwise_init.1 usr/share/man/man1/cmtk-groupwise_warp.1 usr/share/man/man1/cmtk-hausdorff.1 usr/share/man/man1/cmtk-histogram.1 usr/share/man/man1/cmtk-imagemath.1 usr/share/man/man1/cmtk-interleaved_bad_slices.1 usr/share/man/man1/cmtk-iterative_shape_averaging.1 usr/share/man/man1/cmtk-jidb.1 usr/share/man/man1/cmtk-levelset.1 usr/share/man/man1/cmtk-lmsba.1 usr/share/man/man1/cmtk-lsba.1 usr/share/man/man1/cmtk-lvote.1 usr/share/man/man1/cmtk-make_initial_affine.1 usr/share/man/man1/cmtk-mat2dof.1 usr/share/man/man1/cmtk-mcaffine.1 usr/share/man/man1/cmtk-mcwarp.1 usr/share/man/man1/cmtk-mk_adni_phantom.1 usr/share/man/man1/cmtk-mk_analyze_hdr.1 usr/share/man/man1/cmtk-mk_nifti_hdr.1 usr/share/man/man1/cmtk-mk_phantom_3d.1 usr/share/man/man1/cmtk-mrbias.1 usr/share/man/man1/cmtk-overlap.1 usr/share/man/man1/cmtk-probe.1 usr/share/man/man1/cmtk-pxsearch.1 usr/share/man/man1/cmtk-reformatx.1 usr/share/man/man1/cmtk-registration.1 usr/share/man/man1/cmtk-registrationx.1 usr/share/man/man1/cmtk-regress.1 usr/share/man/man1/cmtk-reorient.1 usr/share/man/man1/cmtk-sba.1 usr/share/man/man1/cmtk-sbai.1 usr/share/man/man1/cmtk-sequence.1 usr/share/man/man1/cmtk-similarity.1 usr/share/man/man1/cmtk-split.1 usr/share/man/man1/cmtk-statistics.1 usr/share/man/man1/cmtk-stream_pixels.1 usr/share/man/man1/cmtk-streamxform.1 usr/share/man/man1/cmtk-sympl.1 usr/share/man/man1/cmtk-symplx.1 usr/share/man/man1/cmtk-ttest.1 usr/share/man/man1/cmtk-unsplit.1 usr/share/man/man1/cmtk-unwarp_image_phantom.1 usr/share/man/man1/cmtk-vol2csv.1 usr/share/man/man1/cmtk-volume_injection.1 usr/share/man/man1/cmtk-volume_reconstruction.1 usr/share/man/man1/cmtk-vtkxform.1 usr/share/man/man1/cmtk-warp.1 usr/share/man/man1/cmtk-warp2ps.1 usr/share/man/man1/cmtk-warpx.1 usr/share/man/man1/cmtk-xform2dfield.1 usr/share/man/man1/cmtk-xform2itk.1 usr/share/man/man1/cmtk-xform2scalar.1 usr/share/man/man1/cmtk.1 cd '/build/cmtk-3.3.1p1+dfsg' dh_fixperms find debian/cmtk -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/cmtk ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/cmtk/usr/share/doc -type f -a -true -a ! -regex 'debian/cmtk/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/cmtk/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/cmtk/usr/share/man -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/cmtk -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/cmtk/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x find debian/cmtk/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w dh_missing dh_dwz install -d debian/cmtk/usr/lib/debug/.dwz/i386-linux-gnu dwz -mdebian/cmtk/usr/lib/debug/.dwz/i386-linux-gnu/cmtk.debug -M/usr/lib/debug/.dwz/i386-linux-gnu/cmtk.debug -- debian/cmtk/usr/lib/cmtk/bin/asegment debian/cmtk/usr/lib/cmtk/bin/asegment_sri24 debian/cmtk/usr/lib/cmtk/bin/average_affine debian/cmtk/usr/lib/cmtk/bin/average_images debian/cmtk/usr/lib/cmtk/bin/average_labels debian/cmtk/usr/lib/cmtk/bin/avg_adm debian/cmtk/usr/lib/cmtk/bin/concat_affine debian/cmtk/usr/lib/cmtk/bin/convert_warp debian/cmtk/usr/lib/cmtk/bin/convertx debian/cmtk/usr/lib/cmtk/bin/dbtool debian/cmtk/usr/lib/cmtk/bin/dcm2image debian/cmtk/usr/lib/cmtk/bin/describe debian/cmtk/usr/lib/cmtk/bin/destripe debian/cmtk/usr/lib/cmtk/bin/detect_adni_phantom debian/cmtk/usr/lib/cmtk/bin/detect_spheres_matched_filter debian/cmtk/usr/lib/cmtk/bin/dof2mat debian/cmtk/usr/lib/cmtk/bin/dwi_mask_bad_slices debian/cmtk/usr/lib/cmtk/bin/epiunwarp debian/cmtk/usr/lib/cmtk/bin/fib2image debian/cmtk/usr/lib/cmtk/bin/fibxform debian/cmtk/usr/lib/cmtk/bin/film debian/cmtk/usr/lib/cmtk/bin/filter debian/cmtk/usr/lib/cmtk/bin/fit_affine_dfield debian/cmtk/usr/lib/cmtk/bin/fit_affine_xform debian/cmtk/usr/lib/cmtk/bin/fit_affine_xform_landmarks debian/cmtk/usr/lib/cmtk/bin/fit_spline_dfield debian/cmtk/usr/lib/cmtk/bin/fit_spline_xform debian/cmtk/usr/lib/cmtk/bin/geomatch debian/cmtk/usr/lib/cmtk/bin/glm debian/cmtk/usr/lib/cmtk/bin/gmm debian/cmtk/usr/lib/cmtk/bin/gregxform debian/cmtk/usr/lib/cmtk/bin/groupwise_affine debian/cmtk/usr/lib/cmtk/bin/groupwise_init debian/cmtk/usr/lib/cmtk/bin/groupwise_warp debian/cmtk/usr/lib/cmtk/bin/hausdorff debian/cmtk/usr/lib/cmtk/bin/histogram debian/cmtk/usr/lib/cmtk/bin/imagemath debian/cmtk/usr/lib/cmtk/bin/interleaved_bad_slices debian/cmtk/usr/lib/cmtk/bin/jidb debian/cmtk/usr/lib/cmtk/bin/levelset debian/cmtk/usr/lib/cmtk/bin/lmsba debian/cmtk/usr/lib/cmtk/bin/lsba debian/cmtk/usr/lib/cmtk/bin/lvote debian/cmtk/usr/lib/cmtk/bin/make_initial_affine debian/cmtk/usr/lib/cmtk/bin/mat2dof debian/cmtk/usr/lib/cmtk/bin/mcaffine debian/cmtk/usr/lib/cmtk/bin/mcwarp debian/cmtk/usr/lib/cmtk/bin/mk_adni_phantom debian/cmtk/usr/lib/cmtk/bin/mk_analyze_hdr debian/cmtk/usr/lib/cmtk/bin/mk_nifti_hdr debian/cmtk/usr/lib/cmtk/bin/mk_phantom_3d debian/cmtk/usr/lib/cmtk/bin/mrbias debian/cmtk/usr/lib/cmtk/bin/overlap debian/cmtk/usr/lib/cmtk/bin/probe debian/cmtk/usr/lib/cmtk/bin/pxsearch debian/cmtk/usr/lib/cmtk/bin/reformatx debian/cmtk/usr/lib/cmtk/bin/registration debian/cmtk/usr/lib/cmtk/bin/registrationx debian/cmtk/usr/lib/cmtk/bin/regress debian/cmtk/usr/lib/cmtk/bin/reorient debian/cmtk/usr/lib/cmtk/bin/sba debian/cmtk/usr/lib/cmtk/bin/sbai debian/cmtk/usr/lib/cmtk/bin/sequence debian/cmtk/usr/lib/cmtk/bin/similarity debian/cmtk/usr/lib/cmtk/bin/split debian/cmtk/usr/lib/cmtk/bin/statistics debian/cmtk/usr/lib/cmtk/bin/stream_pixels debian/cmtk/usr/lib/cmtk/bin/streamxform debian/cmtk/usr/lib/cmtk/bin/sympl debian/cmtk/usr/lib/cmtk/bin/symplx debian/cmtk/usr/lib/cmtk/bin/ttest debian/cmtk/usr/lib/cmtk/bin/unsplit debian/cmtk/usr/lib/cmtk/bin/unwarp_image_phantom debian/cmtk/usr/lib/cmtk/bin/vol2csv debian/cmtk/usr/lib/cmtk/bin/volume_injection debian/cmtk/usr/lib/cmtk/bin/volume_reconstruction debian/cmtk/usr/lib/cmtk/bin/vtkxform debian/cmtk/usr/lib/cmtk/bin/warp debian/cmtk/usr/lib/cmtk/bin/warp2ps debian/cmtk/usr/lib/cmtk/bin/warpx debian/cmtk/usr/lib/cmtk/bin/xform2dfield debian/cmtk/usr/lib/cmtk/bin/xform2itk debian/cmtk/usr/lib/cmtk/bin/xform2scalar debian/cmtk/usr/lib/cmtk/libNrrdIO.so debian/cmtk/usr/lib/cmtk/libcmtkBase.so debian/cmtk/usr/lib/cmtk/libcmtkIO.so debian/cmtk/usr/lib/cmtk/libcmtkMxml.so debian/cmtk/usr/lib/cmtk/libcmtkNumerics.so debian/cmtk/usr/lib/cmtk/libcmtkRecon.so debian/cmtk/usr/lib/cmtk/libcmtkRegistration.so debian/cmtk/usr/lib/cmtk/libcmtkSegmentation.so debian/cmtk/usr/lib/cmtk/libcmtkSystem.so dwz: debian/cmtk/usr/lib/cmtk/libNrrdIO.so: DWARF compression not beneficial - old size 144979 new size 147645 objcopy --compress-debug-sections debian/cmtk/usr/lib/debug/.dwz/i386-linux-gnu/cmtk.debug dh_strip install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/2b objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/libNrrdIO.so debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/2b/353d0cc667b9db6ea9ee4ed732ee978ee220f6.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/2b/353d0cc667b9db6ea9ee4ed732ee978ee220f6.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/2b/353d0cc667b9db6ea9ee4ed732ee978ee220f6.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/cmtk/usr/lib/cmtk/libNrrdIO.so objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/2b/353d0cc667b9db6ea9ee4ed732ee978ee220f6.debug debian/cmtk/usr/lib/cmtk/libNrrdIO.so install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/85 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/libcmtkBase.so debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/85/a0590485bd15494a0c56bc6f920101c83e43a2.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/85/a0590485bd15494a0c56bc6f920101c83e43a2.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/85/a0590485bd15494a0c56bc6f920101c83e43a2.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/cmtk/usr/lib/cmtk/libcmtkBase.so objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/85/a0590485bd15494a0c56bc6f920101c83e43a2.debug debian/cmtk/usr/lib/cmtk/libcmtkBase.so install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/13 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/libcmtkMxml.so debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/13/95edfe4bebac7854d0c9e04a283948e302f95c.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/13/95edfe4bebac7854d0c9e04a283948e302f95c.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/13/95edfe4bebac7854d0c9e04a283948e302f95c.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/cmtk/usr/lib/cmtk/libcmtkMxml.so objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/13/95edfe4bebac7854d0c9e04a283948e302f95c.debug debian/cmtk/usr/lib/cmtk/libcmtkMxml.so install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/bd objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/libcmtkNumerics.so debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/bd/2797896445f075d8f5924b3634c1b5f637e49c.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/bd/2797896445f075d8f5924b3634c1b5f637e49c.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/bd/2797896445f075d8f5924b3634c1b5f637e49c.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/cmtk/usr/lib/cmtk/libcmtkNumerics.so objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/bd/2797896445f075d8f5924b3634c1b5f637e49c.debug debian/cmtk/usr/lib/cmtk/libcmtkNumerics.so install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/9a objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/libcmtkRegistration.so debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/9a/100689ab4b5fb82565e884370a7369fcd5fa21.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/9a/100689ab4b5fb82565e884370a7369fcd5fa21.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/9a/100689ab4b5fb82565e884370a7369fcd5fa21.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/cmtk/usr/lib/cmtk/libcmtkRegistration.so objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/9a/100689ab4b5fb82565e884370a7369fcd5fa21.debug debian/cmtk/usr/lib/cmtk/libcmtkRegistration.so install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/59 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/libcmtkIO.so debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/59/6f860caea18104b07bbb61f547445c59ee78e0.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/59/6f860caea18104b07bbb61f547445c59ee78e0.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/59/6f860caea18104b07bbb61f547445c59ee78e0.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/cmtk/usr/lib/cmtk/libcmtkIO.so objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/59/6f860caea18104b07bbb61f547445c59ee78e0.debug debian/cmtk/usr/lib/cmtk/libcmtkIO.so install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/66 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/libcmtkRecon.so debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/66/1fd35bad81b6e6232fb4299eb29a55e275ffd0.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/66/1fd35bad81b6e6232fb4299eb29a55e275ffd0.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/66/1fd35bad81b6e6232fb4299eb29a55e275ffd0.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/cmtk/usr/lib/cmtk/libcmtkRecon.so objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/66/1fd35bad81b6e6232fb4299eb29a55e275ffd0.debug debian/cmtk/usr/lib/cmtk/libcmtkRecon.so install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/4f objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/libcmtkSegmentation.so debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/4f/a9570ee5934bb30baf19cbc713b151bbc29ffb.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/4f/a9570ee5934bb30baf19cbc713b151bbc29ffb.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/4f/a9570ee5934bb30baf19cbc713b151bbc29ffb.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/cmtk/usr/lib/cmtk/libcmtkSegmentation.so objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/4f/a9570ee5934bb30baf19cbc713b151bbc29ffb.debug debian/cmtk/usr/lib/cmtk/libcmtkSegmentation.so install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/52 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/libcmtkSystem.so debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/52/a61a537f15032d16f0ff259fdecf6681c3babb.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/52/a61a537f15032d16f0ff259fdecf6681c3babb.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/52/a61a537f15032d16f0ff259fdecf6681c3babb.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/cmtk/usr/lib/cmtk/libcmtkSystem.so objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/52/a61a537f15032d16f0ff259fdecf6681c3babb.debug debian/cmtk/usr/lib/cmtk/libcmtkSystem.so install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e1 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/asegment debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e1/8ce08ed39a2bf5a9066ce3e36480bcafb7801d.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e1/8ce08ed39a2bf5a9066ce3e36480bcafb7801d.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e1/8ce08ed39a2bf5a9066ce3e36480bcafb7801d.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/asegment objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e1/8ce08ed39a2bf5a9066ce3e36480bcafb7801d.debug debian/cmtk/usr/lib/cmtk/bin/asegment install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/dd objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/mat2dof debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/dd/ecbc11da799c5f3d2742962fe8e1778451327d.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/dd/ecbc11da799c5f3d2742962fe8e1778451327d.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/dd/ecbc11da799c5f3d2742962fe8e1778451327d.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/mat2dof objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/dd/ecbc11da799c5f3d2742962fe8e1778451327d.debug debian/cmtk/usr/lib/cmtk/bin/mat2dof install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f5 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/concat_affine debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f5/47614acde015fbc7a260c266c4becd92885447.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f5/47614acde015fbc7a260c266c4becd92885447.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f5/47614acde015fbc7a260c266c4becd92885447.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/concat_affine objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f5/47614acde015fbc7a260c266c4becd92885447.debug debian/cmtk/usr/lib/cmtk/bin/concat_affine install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c2 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/xform2scalar debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c2/9874cc04e693aaa96667a7b2554f674004ce36.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c2/9874cc04e693aaa96667a7b2554f674004ce36.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c2/9874cc04e693aaa96667a7b2554f674004ce36.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/xform2scalar objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c2/9874cc04e693aaa96667a7b2554f674004ce36.debug debian/cmtk/usr/lib/cmtk/bin/xform2scalar install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a5 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/reformatx debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a5/11bcdb277df3d105de44aab383b68f480ccda4.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a5/11bcdb277df3d105de44aab383b68f480ccda4.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a5/11bcdb277df3d105de44aab383b68f480ccda4.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/reformatx objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/a5/11bcdb277df3d105de44aab383b68f480ccda4.debug debian/cmtk/usr/lib/cmtk/bin/reformatx install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f3 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/lvote debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f3/46e59f4a82140c8ecc98965357325f71e0beef.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f3/46e59f4a82140c8ecc98965357325f71e0beef.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f3/46e59f4a82140c8ecc98965357325f71e0beef.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/lvote objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f3/46e59f4a82140c8ecc98965357325f71e0beef.debug debian/cmtk/usr/lib/cmtk/bin/lvote objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/imagemath debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e1/4ec59992f38879582b2f2e933066ea7614aa06.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e1/4ec59992f38879582b2f2e933066ea7614aa06.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e1/4ec59992f38879582b2f2e933066ea7614aa06.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/imagemath objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e1/4ec59992f38879582b2f2e933066ea7614aa06.debug debian/cmtk/usr/lib/cmtk/bin/imagemath install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/8a objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/overlap debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/8a/7298c6fd60263c30208180e56845d3764c3f7a.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/8a/7298c6fd60263c30208180e56845d3764c3f7a.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/8a/7298c6fd60263c30208180e56845d3764c3f7a.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/overlap objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/8a/7298c6fd60263c30208180e56845d3764c3f7a.debug debian/cmtk/usr/lib/cmtk/bin/overlap install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/03 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/hausdorff debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/03/1aed0bc5375c7264a0a3b3f85a17ad92ca59d5.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/03/1aed0bc5375c7264a0a3b3f85a17ad92ca59d5.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/03/1aed0bc5375c7264a0a3b3f85a17ad92ca59d5.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/hausdorff objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/03/1aed0bc5375c7264a0a3b3f85a17ad92ca59d5.debug debian/cmtk/usr/lib/cmtk/bin/hausdorff install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e6 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/registrationx debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e6/d770cf7a2098bc2f3bee0035487437f8dd13c8.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e6/d770cf7a2098bc2f3bee0035487437f8dd13c8.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e6/d770cf7a2098bc2f3bee0035487437f8dd13c8.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/registrationx objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e6/d770cf7a2098bc2f3bee0035487437f8dd13c8.debug debian/cmtk/usr/lib/cmtk/bin/registrationx install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/3c objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/detect_adni_phantom debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/3c/133cd3102a4bf617a038999602e63cafbd883a.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/3c/133cd3102a4bf617a038999602e63cafbd883a.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/3c/133cd3102a4bf617a038999602e63cafbd883a.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/detect_adni_phantom objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/3c/133cd3102a4bf617a038999602e63cafbd883a.debug debian/cmtk/usr/lib/cmtk/bin/detect_adni_phantom install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e9 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/warpx debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e9/56ef5869359c4a20533a43eef1d6beb5259e9c.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e9/56ef5869359c4a20533a43eef1d6beb5259e9c.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e9/56ef5869359c4a20533a43eef1d6beb5259e9c.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/warpx objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/e9/56ef5869359c4a20533a43eef1d6beb5259e9c.debug debian/cmtk/usr/lib/cmtk/bin/warpx install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/2d objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/fit_spline_dfield debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/2d/ed9c69c8b4eaaaf058ee61a59c0c3a6ef72fc9.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/2d/ed9c69c8b4eaaaf058ee61a59c0c3a6ef72fc9.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/2d/ed9c69c8b4eaaaf058ee61a59c0c3a6ef72fc9.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/fit_spline_dfield objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/2d/ed9c69c8b4eaaaf058ee61a59c0c3a6ef72fc9.debug debian/cmtk/usr/lib/cmtk/bin/fit_spline_dfield install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/80 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/pxsearch debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/80/36d8a1dd4ccd8546f5f5586507d7372e210f96.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/80/36d8a1dd4ccd8546f5f5586507d7372e210f96.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/80/36d8a1dd4ccd8546f5f5586507d7372e210f96.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/pxsearch objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/80/36d8a1dd4ccd8546f5f5586507d7372e210f96.debug debian/cmtk/usr/lib/cmtk/bin/pxsearch install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ae objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/film debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ae/c840c559fa3499d21044397b92705abeac4b1c.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ae/c840c559fa3499d21044397b92705abeac4b1c.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ae/c840c559fa3499d21044397b92705abeac4b1c.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/film objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ae/c840c559fa3499d21044397b92705abeac4b1c.debug debian/cmtk/usr/lib/cmtk/bin/film install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/72 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/stream_pixels debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/72/49046b8bd0c9657c615837ef9aa88b43b5304e.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/72/49046b8bd0c9657c615837ef9aa88b43b5304e.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/72/49046b8bd0c9657c615837ef9aa88b43b5304e.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/stream_pixels objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/72/49046b8bd0c9657c615837ef9aa88b43b5304e.debug debian/cmtk/usr/lib/cmtk/bin/stream_pixels install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/bc objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/destripe debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/bc/d98a5af1b05a5ac47e1c68ba7052149a68add0.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/bc/d98a5af1b05a5ac47e1c68ba7052149a68add0.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/bc/d98a5af1b05a5ac47e1c68ba7052149a68add0.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/destripe objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/bc/d98a5af1b05a5ac47e1c68ba7052149a68add0.debug debian/cmtk/usr/lib/cmtk/bin/destripe install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/08 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/make_initial_affine 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debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/17/5fd5b96fd6ded3098767f0a1d4a7ded34864e8.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/17/5fd5b96fd6ded3098767f0a1d4a7ded34864e8.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/mcaffine objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/17/5fd5b96fd6ded3098767f0a1d4a7ded34864e8.debug debian/cmtk/usr/lib/cmtk/bin/mcaffine install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/b8 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/warp debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/b8/00d370e7989957e8366824e41ad1a224beb365.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/b8/00d370e7989957e8366824e41ad1a224beb365.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/b8/00d370e7989957e8366824e41ad1a224beb365.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/warp objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/b8/00d370e7989957e8366824e41ad1a224beb365.debug debian/cmtk/usr/lib/cmtk/bin/warp install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.dwz cp --reflink=auto -a debian/cmtk/usr/lib/debug/.dwz/i386-linux-gnu debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.dwz rm -fr debian/cmtk/usr/lib/debug/.dwz rmdir -p --ignore-fail-on-non-empty debian/cmtk/usr/lib/debug install -d debian/.debhelper/cmtk/dbgsym-root/usr/share/doc ln -s cmtk debian/.debhelper/cmtk/dbgsym-root/usr/share/doc/cmtk-dbgsym dh_makeshlibs rm -f debian/cmtk/DEBIAN/shlibs dh_shlibdeps install -d debian/cmtk/DEBIAN dpkg-shlibdeps -Tdebian/cmtk.substvars debian/cmtk/usr/lib/cmtk/libNrrdIO.so debian/cmtk/usr/lib/cmtk/libcmtkBase.so debian/cmtk/usr/lib/cmtk/libcmtkMxml.so debian/cmtk/usr/lib/cmtk/libcmtkNumerics.so debian/cmtk/usr/lib/cmtk/libcmtkRegistration.so debian/cmtk/usr/lib/cmtk/libcmtkIO.so debian/cmtk/usr/lib/cmtk/libcmtkRecon.so debian/cmtk/usr/lib/cmtk/libcmtkSegmentation.so debian/cmtk/usr/lib/cmtk/libcmtkSystem.so debian/cmtk/usr/lib/cmtk/bin/asegment debian/cmtk/usr/lib/cmtk/bin/mat2dof debian/cmtk/usr/lib/cmtk/bin/concat_affine debian/cmtk/usr/lib/cmtk/bin/xform2scalar debian/cmtk/usr/lib/cmtk/bin/reformatx debian/cmtk/usr/lib/cmtk/bin/lvote debian/cmtk/usr/lib/cmtk/bin/imagemath debian/cmtk/usr/lib/cmtk/bin/overlap debian/cmtk/usr/lib/cmtk/bin/hausdorff debian/cmtk/usr/lib/cmtk/bin/registrationx debian/cmtk/usr/lib/cmtk/bin/detect_adni_phantom debian/cmtk/usr/lib/cmtk/bin/warpx debian/cmtk/usr/lib/cmtk/bin/fit_spline_dfield debian/cmtk/usr/lib/cmtk/bin/pxsearch debian/cmtk/usr/lib/cmtk/bin/film debian/cmtk/usr/lib/cmtk/bin/stream_pixels debian/cmtk/usr/lib/cmtk/bin/destripe debian/cmtk/usr/lib/cmtk/bin/make_initial_affine debian/cmtk/usr/lib/cmtk/bin/asegment_sri24 debian/cmtk/usr/lib/cmtk/bin/detect_spheres_matched_filter debian/cmtk/usr/lib/cmtk/bin/vol2csv debian/cmtk/usr/lib/cmtk/bin/gmm debian/cmtk/usr/lib/cmtk/bin/gregxform debian/cmtk/usr/lib/cmtk/bin/unsplit debian/cmtk/usr/lib/cmtk/bin/jidb debian/cmtk/usr/lib/cmtk/bin/fibxform debian/cmtk/usr/lib/cmtk/bin/xform2dfield debian/cmtk/usr/lib/cmtk/bin/interleaved_bad_slices debian/cmtk/usr/lib/cmtk/bin/sequence debian/cmtk/usr/lib/cmtk/bin/mrbias debian/cmtk/usr/lib/cmtk/bin/average_labels debian/cmtk/usr/lib/cmtk/bin/geomatch debian/cmtk/usr/lib/cmtk/bin/avg_adm debian/cmtk/usr/lib/cmtk/bin/groupwise_affine debian/cmtk/usr/lib/cmtk/bin/mk_adni_phantom debian/cmtk/usr/lib/cmtk/bin/fit_spline_xform debian/cmtk/usr/lib/cmtk/bin/symplx debian/cmtk/usr/lib/cmtk/bin/average_affine debian/cmtk/usr/lib/cmtk/bin/fit_affine_dfield debian/cmtk/usr/lib/cmtk/bin/dof2mat debian/cmtk/usr/lib/cmtk/bin/convertx debian/cmtk/usr/lib/cmtk/bin/split debian/cmtk/usr/lib/cmtk/bin/volume_injection debian/cmtk/usr/lib/cmtk/bin/mk_analyze_hdr debian/cmtk/usr/lib/cmtk/bin/histogram debian/cmtk/usr/lib/cmtk/bin/probe debian/cmtk/usr/lib/cmtk/bin/average_images debian/cmtk/usr/lib/cmtk/bin/glm debian/cmtk/usr/lib/cmtk/bin/streamxform debian/cmtk/usr/lib/cmtk/bin/xform2itk debian/cmtk/usr/lib/cmtk/bin/dcm2image debian/cmtk/usr/lib/cmtk/bin/unwarp_image_phantom debian/cmtk/usr/lib/cmtk/bin/sbai debian/cmtk/usr/lib/cmtk/bin/epiunwarp debian/cmtk/usr/lib/cmtk/bin/filter debian/cmtk/usr/lib/cmtk/bin/groupwise_init debian/cmtk/usr/lib/cmtk/bin/fib2image debian/cmtk/usr/lib/cmtk/bin/lsba debian/cmtk/usr/lib/cmtk/bin/reorient debian/cmtk/usr/lib/cmtk/bin/sympl debian/cmtk/usr/lib/cmtk/bin/convert_warp debian/cmtk/usr/lib/cmtk/bin/describe debian/cmtk/usr/lib/cmtk/bin/registration debian/cmtk/usr/lib/cmtk/bin/dwi_mask_bad_slices debian/cmtk/usr/lib/cmtk/bin/warp2ps debian/cmtk/usr/lib/cmtk/bin/mk_phantom_3d debian/cmtk/usr/lib/cmtk/bin/mcwarp debian/cmtk/usr/lib/cmtk/bin/regress debian/cmtk/usr/lib/cmtk/bin/volume_reconstruction debian/cmtk/usr/lib/cmtk/bin/sba debian/cmtk/usr/lib/cmtk/bin/lmsba debian/cmtk/usr/lib/cmtk/bin/statistics debian/cmtk/usr/lib/cmtk/bin/ttest debian/cmtk/usr/lib/cmtk/bin/mk_nifti_hdr debian/cmtk/usr/lib/cmtk/bin/levelset debian/cmtk/usr/lib/cmtk/bin/similarity debian/cmtk/usr/lib/cmtk/bin/dbtool debian/cmtk/usr/lib/cmtk/bin/groupwise_warp debian/cmtk/usr/lib/cmtk/bin/vtkxform debian/cmtk/usr/lib/cmtk/bin/fit_affine_xform_landmarks debian/cmtk/usr/lib/cmtk/bin/fit_affine_xform debian/cmtk/usr/lib/cmtk/bin/mcaffine debian/cmtk/usr/lib/cmtk/bin/warp dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/libNrrdIO.so contains an unresolvable reference to symbol sqrt: it's probably a plugin dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRecon.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRecon.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRecon.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRecon.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRecon.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRecon.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/libcmtkMxml.so contains an unresolvable reference to symbol pthread_once: it's probably a plugin dpkg-shlibdeps: warning: 4 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRecon.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRecon.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libNrrdIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libNrrdIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/cmtk/usr/lib/cmtk/bin/mk_nifti_hdr debian/cmtk/usr/lib/cmtk/bin/mk_analyze_hdr debian/cmtk/usr/lib/cmtk/bin/sequence debian/cmtk/usr/lib/cmtk/libcmtkBase.so were not linked against libfftw3_threads.so.3 (they use none of the library's symbols) dh_installdeb find debian/cmtk/etc -type f -printf '/etc/%P ' | LC_ALL=C sort >> debian/cmtk/DEBIAN/conffiles chmod 0644 -- debian/cmtk/DEBIAN/conffiles chown 0:0 -- debian/cmtk/DEBIAN/conffiles dh_gencontrol echo misc:Depends= >> debian/cmtk.substvars echo misc:Pre-Depends= >> debian/cmtk.substvars install -d debian/.debhelper/cmtk/dbgsym-root/DEBIAN dpkg-gencontrol -pcmtk -ldebian/changelog -Tdebian/cmtk.substvars -Pdebian/.debhelper/cmtk/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -UBuilt-Using -DAuto-Built-Package=debug-symbols -UProtected -DPackage=cmtk-dbgsym "-DDepends=cmtk (= \${binary:Version})" "-DDescription=debug symbols for cmtk" "-DBuild-Ids=031aed0bc5375c7264a0a3b3f85a17ad92ca59d5 055d2329006540ccc6c6c30ea85276c49a7e6534 07a60dd9653a1e3ef18f7b5463c6b0d82cb54789 08ac5a17a3cd4eec565fc162dc84f5436c891c2e 0b65b8888bf19fbb72f4dbcbcafeb4289373724a 10937ed880d1559e7500bb672aebfd6a1ae31da3 1395edfe4bebac7854d0c9e04a283948e302f95c 175fd5b96fd6ded3098767f0a1d4a7ded34864e8 1aa3b3d20054552a9c1326ac4edcf97716822d23 1be2b935f48b14b8234493aaa1ca81fb16c17415 1d046cb740aae299e5f316d5a72c06e31412a856 22491e0b2b95a4cde6ad7ce73364a778ee03dddb 2b353d0cc667b9db6ea9ee4ed732ee978ee220f6 2bb3d40bc1b5b47859780106e208bf4e8070edb8 2d92987e9f2c949d3beb3d883e2f53eedd8a7dd9 2ded9c69c8b4eaaaf058ee61a59c0c3a6ef72fc9 2efc0cdf079de95af254591224940258554d1ee9 335067af08db50e253d9f38fdcf48cca60c45aa8 36d010bc4369651ccf9da93ab4555f053d5776f3 3c133cd3102a4bf617a038999602e63cafbd883a 467c051ed625f71b69bb2933fb0cbc531d3dd998 46822c4d553bcd0406850e6987f81b562d5791a0 47e2f676880d1a32a09227133d80e157e04eafa2 4bee2aeb5412320a235bf10c6be533843a19c6ba 4df7e69d8732ec4df548403dd61ca507c9e21d83 4fa9570ee5934bb30baf19cbc713b151bbc29ffb 52a61a537f15032d16f0ff259fdecf6681c3babb 58e264d0754e3030afcfa156f117814e5fe80738 596f860caea18104b07bbb61f547445c59ee78e0 5b0d3282fb179d65bb6990c2d8435f804998e048 5c06664c383b45abd17e1e78a065d754a96df24a 5d86ab39187f4ada594a5f9ebad5bf671a6132f3 6077c5340d8b24e6ec13e407324cdd2827510a7e 65082176ed4d3d3f49ad9d8a2a8a342269824675 661fd35bad81b6e6232fb4299eb29a55e275ffd0 664b024ec39073f88ebd95dff16a930cebe77838 67facc61fdb7903f9b646f0a84b8aa9d35377942 7249046b8bd0c9657c615837ef9aa88b43b5304e 733e61dc8eb8ded74870c07cdf79b0ffef14eb63 749195517ad9dfcfd7896d8bfe81775945c5ff09 7d404466589a89bf7690e0144d50f37b48780ee7 8036d8a1dd4ccd8546f5f5586507d7372e210f96 81395d15a1db4685efee32b9470abc0cec2a2c11 842a1fdeb1094f9dbbe15a87ae58f923cb76b359 85a0590485bd15494a0c56bc6f920101c83e43a2 87ab120a766e3f1748b14fd343e493504d5e5265 88e3572d370b9f3a78f57b42eaf3a41307873f89 8a7298c6fd60263c30208180e56845d3764c3f7a 8af715df87491dc5acaa17aaca05daa77aaced58 8cdc2143ec8de19c32a0e46a0466be6d6f9df0f0 8efa22f553cc0c84da8202e58f08420bcc5e3e74 91563380e92589318013ddd5c2fe902127d21833 928a4bdca575d1b1f10fe2408127bdb87e207969 976e806721e39064e0085795dd182851122e1cae 98cd557a74b99c439448c31d4c3100886c0aac5e 9a100689ab4b5fb82565e884370a7369fcd5fa21 9c0795e3ed09e83375ee70afb68bd2bcd478d5ab a02d98b700fa9d568c7caf1a3e4a8553e552386e a30443a9e1743a5fd15f87c68540a22bc0a2f29a a511bcdb277df3d105de44aab383b68f480ccda4 a71b553ff28c3ff7cab97bda61826a021fe7dc1a a8f44a2ecab5b708054d3b66dda1143292ea5039 ac055b16a69173fa835b36069e8200a0f4b90d26 aec840c559fa3499d21044397b92705abeac4b1c b2937baa8812abe506c5364045aa535f44204628 b800d370e7989957e8366824e41ad1a224beb365 bb23040ecd9f9198d32490d53d68db8c007dbdae bc42669b2ea61f3e402727920ad8e2fbffbeaa31 bcd98a5af1b05a5ac47e1c68ba7052149a68add0 bd2797896445f075d8f5924b3634c1b5f637e49c c1e93e635db137957d5bca1e84fcd173134ff7e8 c29874cc04e693aaa96667a7b2554f674004ce36 c4cb18be71b6a9b600f1758c8f8d0d6750a4651c cfa789993271454c66657d345ec75c3c156bc665 d0436f2b45df46b8692d9d0c7c9aeb9fa9295724 d3c64fa39a9cfbb3ff8806bcdea294e53578a392 d43f0fa6795d4d0fccb225d30b3d93a3cb790c10 d6669d73af8bdf8f91f518db3cc0e49d8c0f8687 dae8d3af7cc90db2bc88b16c7b0d8c75ca51ef1d dcca116c2f535891c820b9bf4a34e766fa6fe163 ddecbc11da799c5f3d2742962fe8e1778451327d e14ec59992f38879582b2f2e933066ea7614aa06 e18ce08ed39a2bf5a9066ce3e36480bcafb7801d e6d770cf7a2098bc2f3bee0035487437f8dd13c8 e956ef5869359c4a20533a43eef1d6beb5259e9c ee74fe820e114ba618c42e6b5a3e7a6e40dbada7 f03f1d2790cb091075a3f2c0bcca473bd4fda560 f346e59f4a82140c8ecc98965357325f71e0beef f4b80435e55df7bdbb4182ddd9b60d57ca6358fe f547614acde015fbc7a260c266c4becd92885447 fb24428a6e8d0354abf51d2626bf31906d0740e1 fc882f73621b4c73ff62fbe80b1768dfe09243c7" -DSection=debug -UMulti-Arch -UReplaces -UBreaks chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/DEBIAN/control chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/DEBIAN/control dpkg-gencontrol -pcmtk -ldebian/changelog -Tdebian/cmtk.substvars -Pdebian/cmtk chmod 0644 -- debian/cmtk/DEBIAN/control chown 0:0 -- debian/cmtk/DEBIAN/control dh_md5sums cd debian/cmtk >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/cmtk/DEBIAN/md5sums chown 0:0 -- debian/cmtk/DEBIAN/md5sums cd debian/.debhelper/cmtk/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/DEBIAN/md5sums chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/DEBIAN/md5sums dh_builddeb dpkg-deb --build debian/cmtk .. dpkg-deb --build debian/.debhelper/cmtk/dbgsym-root .. dpkg-deb: building package 'cmtk' in '../cmtk_3.3.1p1+dfsg-2_i386.deb'. dpkg-deb: building package 'cmtk-dbgsym' in '../cmtk-dbgsym_3.3.1p1+dfsg-2_i386.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../cmtk_3.3.1p1+dfsg-2_i386.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/28914 and its subdirectories I: Current time: Fri Aug 26 17:35:45 -12 2022 I: pbuilder-time-stamp: 1661578545 Sat Jul 24 23:12:47 UTC 2021 I: 1st build successful. Starting 2nd build on remote node ionos12-i386.debian.net. Sat Jul 24 23:12:47 UTC 2021 I: Preparing to do remote build '2' on ionos12-i386.debian.net. Sat Jul 24 23:45:39 UTC 2021 I: Deleting $TMPDIR on ionos12-i386.debian.net. Sat Jul 24 23:45:40 UTC 2021 I: cmtk_3.3.1p1+dfsg-2_i386.changes: Format: 1.8 Date: Mon, 11 Nov 2019 11:11:16 +0100 Source: cmtk Binary: cmtk cmtk-dbgsym Architecture: i386 Version: 3.3.1p1+dfsg-2 Distribution: unstable Urgency: medium Maintainer: NeuroDebian Team Changed-By: Andreas Tille Description: cmtk - Computational Morphometry Toolkit Closes: 874853 Changes: cmtk (3.3.1p1+dfsg-2) unstable; urgency=medium . * Team upload. . [ Moritz Mühlenhoff ] * Disable the GUI tools in the package build Closes: #874853 . [ Andreas Tille ] * debhelper-compat 9 * Standards-Version: 4.4.1 * Trim trailing whitespace. * Use secure URI in debian/watch. * Remove patches missing from debian/patches/series. Checksums-Sha1: fb389e0b48419a34adf355e54dbd95d1a9f2513b 35760668 cmtk-dbgsym_3.3.1p1+dfsg-2_i386.deb 17dd7de138cfc9b5401b077f68b04a3021a2abe5 8259 cmtk_3.3.1p1+dfsg-2_i386.buildinfo fda0d425380be33d5ca83076a7da12d1ad5b0440 2497160 cmtk_3.3.1p1+dfsg-2_i386.deb Checksums-Sha256: 875236337ae7d2990f1b8b45a71bdaf48cd67a6246ef63e4d69f735e2e657221 35760668 cmtk-dbgsym_3.3.1p1+dfsg-2_i386.deb bc3561f4e38a3a1f60ad9590bdcf04d8c15f98329d4c0a32654d62a77d7c6dac 8259 cmtk_3.3.1p1+dfsg-2_i386.buildinfo 643bf02fdb9252b96cd72c1d219babb2cffd8b292be3c4492bda2b6c1b7c841d 2497160 cmtk_3.3.1p1+dfsg-2_i386.deb Files: e7e9cf57a24b03e3f2bf0fdf129ec28d 35760668 debug optional cmtk-dbgsym_3.3.1p1+dfsg-2_i386.deb 890a96b8d181ba828081ad6134b4fe60 8259 science optional cmtk_3.3.1p1+dfsg-2_i386.buildinfo 2a086b0053ecd191a3eb8539ad23b414 2497160 science optional cmtk_3.3.1p1+dfsg-2_i386.deb Sat Jul 24 23:45:42 UTC 2021 I: diffoscope 177 will be used to compare the two builds: # Profiling output for: /usr/bin/diffoscope --html /srv/reproducible-results/rbuild-debian/tmp.h5wwv4vIbH/cmtk_3.3.1p1+dfsg-2.diffoscope.html --text /srv/reproducible-results/rbuild-debian/tmp.h5wwv4vIbH/cmtk_3.3.1p1+dfsg-2.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/tmp.h5wwv4vIbH/cmtk_3.3.1p1+dfsg-2.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/tmp.h5wwv4vIbH/b1/cmtk_3.3.1p1+dfsg-2_i386.changes /srv/reproducible-results/rbuild-debian/tmp.h5wwv4vIbH/b2/cmtk_3.3.1p1+dfsg-2_i386.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.798s) 0.798s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.511s) 0.511s 10 calls diffoscope.comparators.binary.FilesystemFile 0.000s 8 calls abc.DotChangesFile Sat Jul 24 23:45:46 UTC 2021 I: diffoscope 177 found no differences in the changes files, and a .buildinfo file also exists. Sat Jul 24 23:45:46 UTC 2021 I: cmtk from bullseye built successfully and reproducibly on i386. Sat Jul 24 23:45:47 UTC 2021 I: Submitting .buildinfo files to external archives: Sat Jul 24 23:45:47 UTC 2021 I: Submitting 12K b1/cmtk_3.3.1p1+dfsg-2_i386.buildinfo.asc Sat Jul 24 23:45:48 UTC 2021 I: Submitting 12K b2/cmtk_3.3.1p1+dfsg-2_i386.buildinfo.asc Sat Jul 24 23:45:49 UTC 2021 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Sat Jul 24 23:45:49 UTC 2021 I: Done submitting .buildinfo files. Sat Jul 24 23:45:49 UTC 2021 I: Removing signed cmtk_3.3.1p1+dfsg-2_i386.buildinfo.asc files: removed './b1/cmtk_3.3.1p1+dfsg-2_i386.buildinfo.asc' removed './b2/cmtk_3.3.1p1+dfsg-2_i386.buildinfo.asc'