Wed Jul 14 13:14:14 UTC 2021 I: starting to build libmstoolkit/bullseye/armhf on jenkins on '2021-07-14 13:13' Wed Jul 14 13:14:14 UTC 2021 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/armhf_26/6001/console.log Wed Jul 14 13:14:14 UTC 2021 I: Downloading source for bullseye/libmstoolkit=82-7 --2021-07-14 13:14:14-- http://cdn-fastly.deb.debian.org/debian/pool/main/libm/libmstoolkit/libmstoolkit_82-7.dsc Connecting to 78.137.99.97:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2197 (2.1K) Saving to: ‘libmstoolkit_82-7.dsc’ 0K .. 100% 35.7M=0s 2021-07-14 13:14:14 (35.7 MB/s) - ‘libmstoolkit_82-7.dsc’ saved [2197/2197] Wed Jul 14 13:14:14 UTC 2021 I: libmstoolkit_82-7.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: libmstoolkit Binary: libmstoolkit-dev, libmstoolkit82, libmstoolkit-tools Architecture: any Version: 82-7 Maintainer: The Debichem Group Uploaders: Filippo Rusconi Homepage: https://github.com/mhoopmann/mstoolkit Standards-Version: 4.5.0 Vcs-Browser: https://salsa.debian.org/debichem-team/libmstoolkit Vcs-Git: https://salsa.debian.org/debichem-team/libmstoolkit.git Build-Depends: debhelper-compat (= 12), dpkg-dev (>= 1.16.1~), zlib1g-dev (>= 1:1.2.8), libsqlite3-dev (>= 3.8.6), libexpat1-dev (>= 2.1.0), docbook-to-man Package-List: libmstoolkit-dev deb libdevel optional arch=any libmstoolkit-tools deb science optional arch=any libmstoolkit82 deb libs optional arch=any Checksums-Sha1: b5e918a66497132983dea2904bbea6b74a296c03 101094 libmstoolkit_82.orig.tar.gz c81e456867f5588fb481baba35f6c8a8167a6e72 16152 libmstoolkit_82-7.debian.tar.xz Checksums-Sha256: 6066d62b5110eb85ac9ec2827899c1339ce27fe6c2ad9750f09a19c6fdc2e967 101094 libmstoolkit_82.orig.tar.gz 30a6b209498a2a93f31760cd686d946af36b44edcdc58943cefd4897090222a9 16152 libmstoolkit_82-7.debian.tar.xz Files: 44736875135da7442f4edaf2bf585d86 101094 libmstoolkit_82.orig.tar.gz 415e463185afe906d265bf9b3c6b729f 16152 libmstoolkit_82-7.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQIzBAEBCAAdFiEEsFMwThfW1Bndm0ZRQatITXaUz0IFAl7oyb4ACgkQQatITXaU z0J+2A//WFdHQXfXjfHRZj8nDIFGlLcgir6ckjOeUsVDim3K2SOqkCRcmaDqy7Bt LlQ8imcqScdA0NA//V+vEDzrlucYkmSKLXiQgiZUs/d80ki3QYr9SNh+MzLN3NdR eEMetrEOGbly1p4JQ1IT1p3wE2xj8dfoO5o42mcrTXW591a9N2DmpJrfPa5gshcn FRP7PvUc87952ovbOZhVDU0FKPukPRybmnVSURI4XDTq2qucvOOa7KkPmR5WHw91 NAMkwjwSYiPNlyPC1Vx5Gvtyu8itFRAZ58ZvGt58CwRFmcJFZzCyz2ahV/AycEnS c6xDCeFyOrPsooHkNB/fgQon8PpCK+jOwaRfPM0C5S3p7XPL0jA3eE1S+SBqzLZe K5UikLP9bAJ3EPB2WB6dA80qgUQqwz75S8B6a0W56+vD/uEv4EsMHsxzSP26LDn/ ENWNC3rd2cWaZ3PhJ8Cw5izk226YTkHrZNghc9sA9+XVVhApv1kdEAIzU56xDcqG iCqjFdtAqypsjzdU6XxTfb/9RSLYIlSgtBWBb1eBAuJvU47zwuiBslExwF0nVmJm zH985+rayWHBtNxaKugQG8PjDsOJkMPqKgPSDUzYqyK/Ju8ie1b5SgKLvhygljco KqY0rWtTqJ6Gbp+P8AMvoPOeJ+OYzxrYyIsX90+uy7O0yZlGg+o= =171B -----END PGP SIGNATURE----- Wed Jul 14 13:14:14 UTC 2021 I: Checking whether the package is not for us Wed Jul 14 13:14:14 UTC 2021 I: Starting 1st build on remote node jtx1a-armhf-rb.debian.net. Wed Jul 14 13:14:14 UTC 2021 I: Preparing to do remote build '1' on jtx1a-armhf-rb.debian.net. Wed Jul 14 13:18:38 UTC 2021 I: Deleting $TMPDIR on jtx1a-armhf-rb.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Wed Jul 14 01:14:19 -12 2021 I: pbuilder-time-stamp: 1626268459 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bullseye-reproducible-base.tgz] I: copying local configuration I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [libmstoolkit_82-7.dsc] I: copying [./libmstoolkit_82.orig.tar.gz] I: copying [./libmstoolkit_82-7.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/tmp/dpkg-verify-sig.UsDcvxFN/trustedkeys.kbx': General error gpgv: Signature made Tue Jun 16 01:31:42 2020 -12 gpgv: using RSA key B053304E17D6D419DD9B465141AB484D7694CF42 gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./libmstoolkit_82-7.dsc dpkg-source: info: extracting libmstoolkit in libmstoolkit-82 dpkg-source: info: unpacking libmstoolkit_82.orig.tar.gz dpkg-source: info: unpacking libmstoolkit_82-7.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying makefile.patch dpkg-source: info: applying missing-license-stanzas-added.patch I: using fakeroot in build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/16163/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='armhf' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=3' DISTRIBUTION='' HOME='/root' HOST_ARCH='armhf' IFS=' ' INVOCATION_ID='f1253ac5cb064461b0c5eabf4f2e1671' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='16163' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.RtPaqagNRR/pbuilderrc_qVmw --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.RtPaqagNRR/b1 --logfile b1/build.log libmstoolkit_82-7.dsc' SUDO_GID='114' SUDO_UID='108' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://10.0.0.15:8000/' I: uname -a Linux jtx1a 5.10.0-7-arm64 #1 SMP Debian 5.10.40-1 (2021-05-28) aarch64 GNU/Linux I: ls -l /bin total 3580 -rwxr-xr-x 1 root root 816764 Jun 21 14:26 bash -rwxr-xr-x 3 root root 26052 Jul 20 2020 bunzip2 -rwxr-xr-x 3 root root 26052 Jul 20 2020 bzcat lrwxrwxrwx 1 root root 6 Jul 20 2020 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2225 Jul 20 2020 bzdiff lrwxrwxrwx 1 root root 6 Jul 20 2020 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4877 Sep 4 2019 bzexe lrwxrwxrwx 1 root root 6 Jul 20 2020 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3775 Jul 20 2020 bzgrep -rwxr-xr-x 3 root root 26052 Jul 20 2020 bzip2 -rwxr-xr-x 1 root root 9636 Jul 20 2020 bzip2recover lrwxrwxrwx 1 root root 6 Jul 20 2020 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Jul 20 2020 bzmore -rwxr-xr-x 1 root root 26668 Sep 22 2020 cat -rwxr-xr-x 1 root root 43104 Sep 22 2020 chgrp -rwxr-xr-x 1 root root 38984 Sep 22 2020 chmod -rwxr-xr-x 1 root root 43112 Sep 22 2020 chown -rwxr-xr-x 1 root root 92616 Sep 22 2020 cp -rwxr-xr-x 1 root root 75524 Dec 10 2020 dash -rwxr-xr-x 1 root root 75880 Sep 22 2020 date -rwxr-xr-x 1 root root 55436 Sep 22 2020 dd -rwxr-xr-x 1 root root 59912 Sep 22 2020 df -rwxr-xr-x 1 root root 96764 Sep 22 2020 dir -rwxr-xr-x 1 root root 55012 Feb 7 02:38 dmesg lrwxrwxrwx 1 root root 8 Nov 6 2019 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Nov 6 2019 domainname -> hostname -rwxr-xr-x 1 root root 22508 Sep 22 2020 echo -rwxr-xr-x 1 root root 28 Nov 9 2020 egrep -rwxr-xr-x 1 root root 22496 Sep 22 2020 false -rwxr-xr-x 1 root root 28 Nov 9 2020 fgrep -rwxr-xr-x 1 root root 47492 Feb 7 02:38 findmnt -rwsr-xr-x 1 root root 26076 Feb 26 04:12 fusermount -rwxr-xr-x 1 root root 124508 Nov 9 2020 grep -rwxr-xr-x 2 root root 2346 Mar 2 11:30 gunzip -rwxr-xr-x 1 root root 6376 Mar 2 11:30 gzexe -rwxr-xr-x 1 root root 64212 Mar 2 11:30 gzip -rwxr-xr-x 1 root root 13784 Nov 6 2019 hostname -rwxr-xr-x 1 root root 43180 Sep 22 2020 ln -rwxr-xr-x 1 root root 35068 Feb 7 2020 login -rwxr-xr-x 1 root root 96764 Sep 22 2020 ls -rwxr-xr-x 1 root root 99940 Feb 7 02:38 lsblk -rwxr-xr-x 1 root root 51408 Sep 22 2020 mkdir -rwxr-xr-x 1 root root 43184 Sep 22 2020 mknod -rwxr-xr-x 1 root root 30780 Sep 22 2020 mktemp -rwxr-xr-x 1 root root 34408 Feb 7 02:38 more -rwsr-xr-x 1 root root 34400 Feb 7 02:38 mount -rwxr-xr-x 1 root root 9824 Feb 7 02:38 mountpoint -rwxr-xr-x 1 root root 88524 Sep 22 2020 mv lrwxrwxrwx 1 root root 8 Nov 6 2019 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Apr 18 03:38 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 26652 Sep 22 2020 pwd lrwxrwxrwx 1 root root 4 Jun 21 14:26 rbash -> bash -rwxr-xr-x 1 root root 30740 Sep 22 2020 readlink -rwxr-xr-x 1 root root 43104 Sep 22 2020 rm -rwxr-xr-x 1 root root 30732 Sep 22 2020 rmdir -rwxr-xr-x 1 root root 14144 Sep 27 2020 run-parts -rwxr-xr-x 1 root root 76012 Dec 22 2018 sed lrwxrwxrwx 1 root root 4 Jul 12 21:26 sh -> dash -rwxr-xr-x 1 root root 22532 Sep 22 2020 sleep -rwxr-xr-x 1 root root 55360 Sep 22 2020 stty -rwsr-xr-x 1 root root 46704 Feb 7 02:38 su -rwxr-xr-x 1 root root 22532 Sep 22 2020 sync -rwxr-xr-x 1 root root 340872 Feb 16 21:55 tar -rwxr-xr-x 1 root root 9808 Sep 27 2020 tempfile -rwxr-xr-x 1 root root 67696 Sep 22 2020 touch -rwxr-xr-x 1 root root 22496 Sep 22 2020 true -rwxr-xr-x 1 root root 9636 Feb 26 04:12 ulockmgr_server -rwsr-xr-x 1 root root 22108 Feb 7 02:38 umount -rwxr-xr-x 1 root root 22520 Sep 22 2020 uname -rwxr-xr-x 2 root root 2346 Mar 2 11:30 uncompress -rwxr-xr-x 1 root root 96764 Sep 22 2020 vdir -rwxr-xr-x 1 root root 38512 Feb 7 02:38 wdctl lrwxrwxrwx 1 root root 8 Nov 6 2019 ypdomainname -> hostname -rwxr-xr-x 1 root root 1984 Mar 2 11:30 zcat -rwxr-xr-x 1 root root 1678 Mar 2 11:30 zcmp -rwxr-xr-x 1 root root 5880 Mar 2 11:30 zdiff -rwxr-xr-x 1 root root 29 Mar 2 11:30 zegrep -rwxr-xr-x 1 root root 29 Mar 2 11:30 zfgrep -rwxr-xr-x 1 root root 2081 Mar 2 11:30 zforce -rwxr-xr-x 1 root root 7585 Mar 2 11:30 zgrep -rwxr-xr-x 1 root root 2206 Mar 2 11:30 zless -rwxr-xr-x 1 root root 1842 Mar 2 11:30 zmore -rwxr-xr-x 1 root root 4553 Mar 2 11:30 znew I: user script /srv/workspace/pbuilder/16163/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: armhf Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 12), dpkg-dev (>= 1.16.1~), zlib1g-dev (>= 1:1.2.8), libsqlite3-dev (>= 3.8.6), libexpat1-dev (>= 2.1.0), docbook-to-man dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19398 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 12); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on zlib1g-dev (>= 1:1.2.8); however: Package zlib1g-dev is not installed. pbuilder-satisfydepends-dummy depends on libsqlite3-dev (>= 3.8.6); however: Package libsqlite3-dev is not installed. pbuilder-satisfydepends-dummy depends on libexpat1-dev (>= 2.1.0); however: Package libexpat1-dev is not installed. pbuilder-satisfydepends-dummy depends on docbook-to-man; however: Package docbook-to-man is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} docbook{a} docbook-to-man{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libdebhelper-perl{a} libelf1{a} libexpat1{a} libexpat1-dev{a} libfile-stripnondeterminism-perl{a} libicu67{a} libmagic-mgc{a} libmagic1{a} libosp5{a} libpipeline1{a} libsigsegv2{a} libsqlite3-dev{a} libsub-override-perl{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} opensp{a} po-debconf{a} sensible-utils{a} sgml-base{a} sgml-data{a} xml-core{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 42 newly installed, 0 to remove and 0 not upgraded. Need to get 20.6 MB of archives. After unpacking 73.4 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian bullseye/main armhf bsdextrautils armhf 2.36.1-7 [138 kB] Get: 2 http://deb.debian.org/debian bullseye/main armhf libuchardet0 armhf 0.0.7-1 [65.0 kB] Get: 3 http://deb.debian.org/debian bullseye/main armhf groff-base armhf 1.22.4-6 [847 kB] Get: 4 http://deb.debian.org/debian bullseye/main armhf libpipeline1 armhf 1.5.3-1 [30.1 kB] Get: 5 http://deb.debian.org/debian bullseye/main armhf man-db armhf 2.9.4-2 [1319 kB] Get: 6 http://deb.debian.org/debian bullseye/main armhf sgml-base all 1.30 [15.1 kB] Get: 7 http://deb.debian.org/debian bullseye/main armhf sensible-utils all 0.0.14 [14.8 kB] Get: 8 http://deb.debian.org/debian bullseye/main armhf libmagic-mgc armhf 1:5.39-3 [273 kB] Get: 9 http://deb.debian.org/debian bullseye/main armhf libmagic1 armhf 1:5.39-3 [117 kB] Get: 10 http://deb.debian.org/debian bullseye/main armhf file armhf 1:5.39-3 [68.1 kB] Get: 11 http://deb.debian.org/debian bullseye/main armhf gettext-base armhf 0.21-4 [171 kB] Get: 12 http://deb.debian.org/debian bullseye/main armhf libsigsegv2 armhf 2.13-1 [34.0 kB] Get: 13 http://deb.debian.org/debian bullseye/main armhf m4 armhf 1.4.18-5 [192 kB] Get: 14 http://deb.debian.org/debian bullseye/main armhf autoconf all 2.69-14 [313 kB] Get: 15 http://deb.debian.org/debian bullseye/main armhf autotools-dev all 20180224.1+nmu1 [77.1 kB] Get: 16 http://deb.debian.org/debian bullseye/main armhf automake all 1:1.16.3-2 [814 kB] Get: 17 http://deb.debian.org/debian bullseye/main armhf autopoint all 0.21-4 [510 kB] Get: 18 http://deb.debian.org/debian bullseye/main armhf libdebhelper-perl all 13.3.4 [189 kB] Get: 19 http://deb.debian.org/debian bullseye/main armhf libtool all 2.4.6-15 [513 kB] Get: 20 http://deb.debian.org/debian bullseye/main armhf dh-autoreconf all 20 [17.1 kB] Get: 21 http://deb.debian.org/debian bullseye/main armhf libarchive-zip-perl all 1.68-1 [104 kB] Get: 22 http://deb.debian.org/debian bullseye/main armhf libsub-override-perl all 0.09-2 [10.2 kB] Get: 23 http://deb.debian.org/debian bullseye/main armhf libfile-stripnondeterminism-perl all 1.11.0-1 [25.6 kB] Get: 24 http://deb.debian.org/debian bullseye/main armhf dh-strip-nondeterminism all 1.11.0-1 [15.3 kB] Get: 25 http://deb.debian.org/debian bullseye/main armhf libelf1 armhf 0.183-1 [161 kB] Get: 26 http://deb.debian.org/debian bullseye/main armhf dwz armhf 0.13+20210201-1 [179 kB] Get: 27 http://deb.debian.org/debian bullseye/main armhf libicu67 armhf 67.1-7 [8319 kB] Get: 28 http://deb.debian.org/debian bullseye/main armhf libxml2 armhf 2.9.10+dfsg-6.7 [602 kB] Get: 29 http://deb.debian.org/debian bullseye/main armhf gettext armhf 0.21-4 [1243 kB] Get: 30 http://deb.debian.org/debian bullseye/main armhf intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get: 31 http://deb.debian.org/debian bullseye/main armhf po-debconf all 1.0.21+nmu1 [248 kB] Get: 32 http://deb.debian.org/debian bullseye/main armhf debhelper all 13.3.4 [1049 kB] Get: 33 http://deb.debian.org/debian bullseye/main armhf xml-core all 0.18+nmu1 [23.8 kB] Get: 34 http://deb.debian.org/debian bullseye/main armhf sgml-data all 2.0.11+nmu1 [179 kB] Get: 35 http://deb.debian.org/debian bullseye/main armhf docbook all 4.5-6 [129 kB] Get: 36 http://deb.debian.org/debian bullseye/main armhf libosp5 armhf 1.5.2-13+b2 [847 kB] Get: 37 http://deb.debian.org/debian bullseye/main armhf opensp armhf 1.5.2-13+b2 [405 kB] Get: 38 http://deb.debian.org/debian bullseye/main armhf docbook-to-man armhf 1:2.0.0-45 [73.1 kB] Get: 39 http://deb.debian.org/debian bullseye/main armhf libexpat1 armhf 2.2.10-2 [76.3 kB] Get: 40 http://deb.debian.org/debian bullseye/main armhf libexpat1-dev armhf 2.2.10-2 [123 kB] Get: 41 http://deb.debian.org/debian bullseye/main armhf libsqlite3-dev armhf 3.34.1-3 [890 kB] Get: 42 http://deb.debian.org/debian bullseye/main armhf zlib1g-dev armhf 1:1.2.11.dfsg-2 [185 kB] Fetched 20.6 MB in 14s (1496 kB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package bsdextrautils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19398 files and directories currently installed.) Preparing to unpack .../00-bsdextrautils_2.36.1-7_armhf.deb ... Unpacking bsdextrautils (2.36.1-7) ... Selecting previously unselected package libuchardet0:armhf. Preparing to unpack .../01-libuchardet0_0.0.7-1_armhf.deb ... Unpacking libuchardet0:armhf (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../02-groff-base_1.22.4-6_armhf.deb ... Unpacking groff-base (1.22.4-6) ... Selecting previously unselected package libpipeline1:armhf. Preparing to unpack .../03-libpipeline1_1.5.3-1_armhf.deb ... Unpacking libpipeline1:armhf (1.5.3-1) ... Selecting previously unselected package man-db. Preparing to unpack .../04-man-db_2.9.4-2_armhf.deb ... Unpacking man-db (2.9.4-2) ... Selecting previously unselected package sgml-base. Preparing to unpack .../05-sgml-base_1.30_all.deb ... Unpacking sgml-base (1.30) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../06-sensible-utils_0.0.14_all.deb ... Unpacking sensible-utils (0.0.14) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../07-libmagic-mgc_1%3a5.39-3_armhf.deb ... Unpacking libmagic-mgc (1:5.39-3) ... Selecting previously unselected package libmagic1:armhf. Preparing to unpack .../08-libmagic1_1%3a5.39-3_armhf.deb ... Unpacking libmagic1:armhf (1:5.39-3) ... Selecting previously unselected package file. Preparing to unpack .../09-file_1%3a5.39-3_armhf.deb ... Unpacking file (1:5.39-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../10-gettext-base_0.21-4_armhf.deb ... Unpacking gettext-base (0.21-4) ... Selecting previously unselected package libsigsegv2:armhf. Preparing to unpack .../11-libsigsegv2_2.13-1_armhf.deb ... Unpacking libsigsegv2:armhf (2.13-1) ... Selecting previously unselected package m4. Preparing to unpack .../12-m4_1.4.18-5_armhf.deb ... Unpacking m4 (1.4.18-5) ... Selecting previously unselected package autoconf. Preparing to unpack .../13-autoconf_2.69-14_all.deb ... Unpacking autoconf (2.69-14) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../14-autotools-dev_20180224.1+nmu1_all.deb ... Unpacking autotools-dev (20180224.1+nmu1) ... Selecting previously unselected package automake. Preparing to unpack .../15-automake_1%3a1.16.3-2_all.deb ... Unpacking automake (1:1.16.3-2) ... 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Setting up dh-autoreconf (20) ... Setting up debhelper (13.3.4) ... Processing triggers for libc-bin (2.31-12) ... Processing triggers for sgml-base (1.30) ... Setting up sgml-data (2.0.11+nmu1) ... Processing triggers for sgml-base (1.30) ... Setting up docbook (4.5-6) ... Processing triggers for sgml-base (1.30) ... Setting up docbook-to-man (1:2.0.0-45) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps Reading package lists... Building dependency tree... Reading state information... fakeroot is already the newest version (1.25.3-1.1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package I: Running cd /build/libmstoolkit-82/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../libmstoolkit_82-7_source.changes dpkg-buildpackage: info: source package libmstoolkit dpkg-buildpackage: info: source version 82-7 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Filippo Rusconi dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf fakeroot debian/rules clean dh clean debian/rules override_dh_auto_clean make[1]: Entering directory '/build/libmstoolkit-82' make clean make[2]: Entering directory '/build/libmstoolkit-82' rm -f libmstoolkitlite.a libmstoolkitlite.so libmstoolkitlite.so.82* libmstoolkit.a libmstoolkit.so libmstoolkit.so.82* rm -f *.o msSingleScan.* make[2]: Leaving directory '/build/libmstoolkit-82' rm -f libmstoolkit.3 make[1]: Leaving directory '/build/libmstoolkit-82' dh_clean rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/libmstoolkit-dev.substvars debian/libmstoolkit82.substvars debian/libmstoolkit-tools.substvars debian/files rm -fr -- debian/libmstoolkit-dev/ debian/tmp/ debian/libmstoolkit82/ debian/libmstoolkit-tools/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a -name autom4te.cache -prune -exec rm -rf {} + \) \) debian/rules build dh build dh_update_autotools_config dh_autoreconf dh_auto_configure debian/rules override_dh_auto_build make[1]: Entering directory '/build/libmstoolkit-82' docbook-to-man debian/libmstoolkit.sgml > debian/libmstoolkit.3 make all make[2]: Entering directory '/build/libmstoolkit-82' make arlib make[3]: Entering directory '/build/libmstoolkit-82' rm -f *.o msSingleScan.* g++ -O3 -static -g -I. -I./include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DGCC -DHAVE_EXPAT_CONFIG_H src/mzParser/MSNumpress.cpp -c -o mzp.MSNumpress.o g++ -O3 -static -g -I. -I./include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DGCC -DHAVE_EXPAT_CONFIG_H src/mzParser/mzp_base64.cpp -c -o mzp.mzp_base64.o g++ -O3 -static -g -I. -I./include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DGCC -DHAVE_EXPAT_CONFIG_H src/mzParser/BasicSpectrum.cpp -c -o mzp.BasicSpectrum.o In file included from /usr/include/c++/10/vector:72, from ./include/mzParser.h:26, from src/mzParser/BasicSpectrum.cpp:8: /usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const specDP&}; _Tp = specDP; _Alloc = std::allocator]': /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:67, from ./include/mzParser.h:26, from src/mzParser/BasicSpectrum.cpp:8: /usr/include/c++/10/bits/stl_vector.h: In member function 'void BasicSpectrum::addDP(specDP)': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:72, from ./include/mzParser.h:26, from src/mzParser/BasicSpectrum.cpp:8: /usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const sPrecursorIon&}; _Tp = sPrecursorIon; _Alloc = std::allocator]': /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:67, from ./include/mzParser.h:26, from src/mzParser/BasicSpectrum.cpp:8: /usr/include/c++/10/bits/stl_vector.h: In member function 'BasicSpectrum& BasicSpectrum::operator=(const BasicSpectrum&)': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h: In copy constructor 'BasicSpectrum::BasicSpectrum(const BasicSpectrum&)': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h: In member function 'void BasicSpectrum::setPrecursorIon(sPrecursorIon&)': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ g++ -O3 -static -g -I. -I./include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DGCC -DHAVE_EXPAT_CONFIG_H src/mzParser/mzParser.cpp -c -o mzp.mzParser.o g++ -O3 -static -g -I. -I./include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DGCC -DHAVE_EXPAT_CONFIG_H src/mzParser/RAMPface.cpp -c -o mzp.RAMPface.o g++ -O3 -static -g -I. -I./include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DGCC -DHAVE_EXPAT_CONFIG_H src/mzParser/saxhandler.cpp -c -o mzp.saxhandler.o g++ -O3 -static -g -I. -I./include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DGCC -DHAVE_EXPAT_CONFIG_H src/mzParser/saxmzmlhandler.cpp -c -o mzp.saxmzmlhandler.o In file included from /usr/include/c++/10/vector:72, from ./include/mzParser.h:26, from src/mzParser/saxmzmlhandler.cpp:36: /usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const cindex&}; _Tp = cindex; _Alloc = std::allocator]': /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]': /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 /usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]': /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 In file included from /usr/include/c++/10/vector:67, from ./include/mzParser.h:26, from src/mzParser/saxmzmlhandler.cpp:36: /usr/include/c++/10/bits/stl_vector.h: In member function 'void mzpSAXMzmlHandler::decode(std::vector&)': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:72, from ./include/mzParser.h:26, from src/mzParser/saxmzmlhandler.cpp:36: /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:67, from ./include/mzParser.h:26, from src/mzParser/saxmzmlhandler.cpp:36: /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:72, from ./include/mzParser.h:26, from src/mzParser/saxmzmlhandler.cpp:36: /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:67, from ./include/mzParser.h:26, from src/mzParser/saxmzmlhandler.cpp:36: /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h: In member function 'virtual void mzpSAXMzmlHandler::endElement(const XML_Char*)': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ g++ -O3 -static -g -I. -I./include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DGCC -DHAVE_EXPAT_CONFIG_H src/mzParser/saxmzxmlhandler.cpp -c -o mzp.saxmzxmlhandler.o In file included from /usr/include/c++/10/vector:72, from ./include/mzParser.h:26, from src/mzParser/saxmzxmlhandler.cpp:21: /usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const cindex&}; _Tp = cindex; _Alloc = std::allocator]': /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]': /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 In file included from /usr/include/c++/10/vector:67, from ./include/mzParser.h:26, from src/mzParser/saxmzxmlhandler.cpp:21: /usr/include/c++/10/bits/stl_vector.h: In member function 'void mzpSAXMzxmlHandler::decode64()': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h: In member function 'void mzpSAXMzxmlHandler::decompress64()': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:72, from ./include/mzParser.h:26, from src/mzParser/saxmzxmlhandler.cpp:21: /usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]': /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/vector.tcc: In member function 'void mzpSAXMzxmlHandler::decode32()': /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/vector.tcc: In member function 'void mzpSAXMzxmlHandler::decompress32()': /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:67, from ./include/mzParser.h:26, from src/mzParser/saxmzxmlhandler.cpp:21: /usr/include/c++/10/bits/stl_vector.h: In member function 'virtual void mzpSAXMzxmlHandler::endElement(const XML_Char*)': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ g++ -O3 -static -g -I. -I./include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DGCC -DHAVE_EXPAT_CONFIG_H src/mzParser/Czran.cpp -c -o mzp.Czran.o g++ -O3 -static -g -I. -I./include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DGCC -DHAVE_EXPAT_CONFIG_H src/mzParser/mz5handler.cpp -c -o mzp.mz5handler.o g++ -O3 -static -g -I. -I./include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DGCC -DHAVE_EXPAT_CONFIG_H src/mzParser/mzpMz5Config.cpp -c -o mzp.mzpMz5Config.o g++ -O3 -static -g -I. -I./include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DGCC -DHAVE_EXPAT_CONFIG_H src/mzParser/mzpMz5Structs.cpp -c -o mzp.mzpMz5Structs.o g++ -O3 -static -g -I. -I./include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DGCC -DHAVE_EXPAT_CONFIG_H src/mzParser/BasicChromatogram.cpp -c -o mzp.BasicChromatogram.o In file included from /usr/include/c++/10/vector:72, from ./include/mzParser.h:26, from src/mzParser/BasicChromatogram.cpp:11: /usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const TimeIntensityPair&}; _Tp = TimeIntensityPair; _Alloc = std::allocator]': /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:67, from ./include/mzParser.h:26, from src/mzParser/BasicChromatogram.cpp:11: /usr/include/c++/10/bits/stl_vector.h: In member function 'void BasicChromatogram::addTIP(TimeIntensityPair)': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h: In copy constructor 'BasicChromatogram::BasicChromatogram(const BasicChromatogram&)': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h: In member function 'BasicChromatogram& BasicChromatogram::operator=(const BasicChromatogram&)': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ g++ -O3 -static -g -I. -I./include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DGCC -DHAVE_EXPAT_CONFIG_H src/mzParser/PWIZface.cpp -c -o mzp.PWIZface.o g++ -O3 -static -g -I. -I./include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DGCC -DHAVE_EXPAT_CONFIG_H src/mzParser/mzp_base64.cpp -c -o mzp.mzp_base64_lite.o g++ -O3 -static -g -I. -I./include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DGCC -DHAVE_EXPAT_CONFIG_H src/mzParser/BasicSpectrum.cpp -c -o mzp.BasicSpectrum_lite.o In file included from /usr/include/c++/10/vector:72, from ./include/mzParser.h:26, from src/mzParser/BasicSpectrum.cpp:8: /usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const specDP&}; _Tp = specDP; _Alloc = std::allocator]': /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:67, from ./include/mzParser.h:26, from src/mzParser/BasicSpectrum.cpp:8: /usr/include/c++/10/bits/stl_vector.h: In member function 'void BasicSpectrum::addDP(specDP)': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:72, from ./include/mzParser.h:26, from src/mzParser/BasicSpectrum.cpp:8: /usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const sPrecursorIon&}; _Tp = sPrecursorIon; _Alloc = std::allocator]': /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:67, from ./include/mzParser.h:26, from src/mzParser/BasicSpectrum.cpp:8: /usr/include/c++/10/bits/stl_vector.h: In member function 'BasicSpectrum& BasicSpectrum::operator=(const BasicSpectrum&)': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h: In copy constructor 'BasicSpectrum::BasicSpectrum(const BasicSpectrum&)': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h: In member function 'void BasicSpectrum::setPrecursorIon(sPrecursorIon&)': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ g++ -O3 -static -g -I. -I./include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DGCC -DHAVE_EXPAT_CONFIG_H src/mzParser/mzParser.cpp -c -o mzp.mzParser_lite.o g++ -O3 -static -g -I. -I./include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DGCC -DHAVE_EXPAT_CONFIG_H src/mzParser/RAMPface.cpp -c -o mzp.RAMPface_lite.o g++ -O3 -static -g -I. -I./include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DGCC -DHAVE_EXPAT_CONFIG_H src/mzParser/saxhandler.cpp -c -o mzp.saxhandler_lite.o g++ -O3 -static -g -I. -I./include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DGCC -DHAVE_EXPAT_CONFIG_H src/mzParser/saxmzmlhandler.cpp -c -o mzp.saxmzmlhandler_lite.o In file included from /usr/include/c++/10/vector:72, from ./include/mzParser.h:26, from src/mzParser/saxmzmlhandler.cpp:36: /usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const cindex&}; _Tp = cindex; _Alloc = std::allocator]': /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]': /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 /usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]': /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 In file included from /usr/include/c++/10/vector:67, from ./include/mzParser.h:26, from src/mzParser/saxmzmlhandler.cpp:36: /usr/include/c++/10/bits/stl_vector.h: In member function 'void mzpSAXMzmlHandler::decode(std::vector&)': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:72, from ./include/mzParser.h:26, from src/mzParser/saxmzmlhandler.cpp:36: /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:67, from ./include/mzParser.h:26, from src/mzParser/saxmzmlhandler.cpp:36: /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:72, from ./include/mzParser.h:26, from src/mzParser/saxmzmlhandler.cpp:36: /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:67, from ./include/mzParser.h:26, from src/mzParser/saxmzmlhandler.cpp:36: /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h: In member function 'virtual void mzpSAXMzmlHandler::endElement(const XML_Char*)': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ g++ -O3 -static -g -I. -I./include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DGCC -DHAVE_EXPAT_CONFIG_H src/mzParser/saxmzxmlhandler.cpp -c -o mzp.saxmzxmlhandler_lite.o In file included from /usr/include/c++/10/vector:72, from ./include/mzParser.h:26, from src/mzParser/saxmzxmlhandler.cpp:21: /usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const cindex&}; _Tp = cindex; _Alloc = std::allocator]': /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]': /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 In file included from /usr/include/c++/10/vector:67, from ./include/mzParser.h:26, from src/mzParser/saxmzxmlhandler.cpp:21: /usr/include/c++/10/bits/stl_vector.h: In member function 'void mzpSAXMzxmlHandler::decode64()': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h: In member function 'void mzpSAXMzxmlHandler::decompress64()': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:72, from ./include/mzParser.h:26, from src/mzParser/saxmzxmlhandler.cpp:21: /usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]': /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/vector.tcc: In member function 'void mzpSAXMzxmlHandler::decode32()': /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/vector.tcc: In member function 'void mzpSAXMzxmlHandler::decompress32()': /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:67, from ./include/mzParser.h:26, from src/mzParser/saxmzxmlhandler.cpp:21: /usr/include/c++/10/bits/stl_vector.h: In member function 'virtual void mzpSAXMzxmlHandler::endElement(const XML_Char*)': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ g++ -O3 -static -g -I. -I./include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DGCC -DHAVE_EXPAT_CONFIG_H src/mzParser/Czran.cpp -c -o mzp.Czran_lite.o g++ -O3 -static -g -I. -I./include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DGCC -DHAVE_EXPAT_CONFIG_H src/mzParser/mz5handler.cpp -c -o mzp.mz5handler_lite.o g++ -O3 -static -g -I. -I./include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DGCC -DHAVE_EXPAT_CONFIG_H src/mzParser/mzpMz5Config.cpp -c -o mzp.mzpMz5Config_lite.o g++ -O3 -static -g -I. -I./include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DGCC -DHAVE_EXPAT_CONFIG_H src/mzParser/mzpMz5Structs.cpp -c -o mzp.mzpMz5Structs_lite.o g++ -O3 -static -g -I. -I./include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DGCC -DHAVE_EXPAT_CONFIG_H src/mzParser/BasicChromatogram.cpp -c -o mzp.BasicChromatogram_lite.o In file included from /usr/include/c++/10/vector:72, from ./include/mzParser.h:26, from src/mzParser/BasicChromatogram.cpp:11: /usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const TimeIntensityPair&}; _Tp = TimeIntensityPair; _Alloc = std::allocator]': /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:67, from ./include/mzParser.h:26, from src/mzParser/BasicChromatogram.cpp:11: /usr/include/c++/10/bits/stl_vector.h: In member function 'void BasicChromatogram::addTIP(TimeIntensityPair)': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h: In copy constructor 'BasicChromatogram::BasicChromatogram(const BasicChromatogram&)': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h: In member function 'BasicChromatogram& BasicChromatogram::operator=(const BasicChromatogram&)': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ g++ -O3 -static -g -I. -I./include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DGCC -DHAVE_EXPAT_CONFIG_H src/mzParser/PWIZface.cpp -c -o mzp.PWIZface_lite.o g++ -O3 -static -g -I. -I./include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DGCC -DHAVE_EXPAT_CONFIG_H ./src/MSToolkit/Spectrum.cpp -c In file included from /usr/include/c++/10/vector:72, from ./include/Spectrum.h:20, from ./src/MSToolkit/Spectrum.cpp:16: /usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]': /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:67, from ./include/Spectrum.h:20, from ./src/MSToolkit/Spectrum.cpp:16: /usr/include/c++/10/bits/stl_vector.h: In member function 'void MSToolkit::Spectrum::addMZ(double, double)': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h: In member function 'void MSToolkit::Spectrum::setMZ(double, double)': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:72, from ./include/Spectrum.h:20, from ./src/MSToolkit/Spectrum.cpp:16: /usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const MSToolkit::Peak_T&}; _Tp = MSToolkit::Peak_T; _Alloc = std::allocator]': /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:67, from ./include/Spectrum.h:20, from ./src/MSToolkit/Spectrum.cpp:16: /usr/include/c++/10/bits/stl_vector.h: In member function 'void MSToolkit::Spectrum::setPeaks(std::vector)': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h: In member function 'void MSToolkit::Spectrum::add(MSToolkit::Peak_T&)': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h: In member function 'void MSToolkit::Spectrum::add(double, float)': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:72, from ./include/Spectrum.h:20, from ./src/MSToolkit/Spectrum.cpp:16: /usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const MSToolkit::EZState&}; _Tp = MSToolkit::EZState; _Alloc = std::allocator]': /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:67, from ./include/Spectrum.h:20, from ./src/MSToolkit/Spectrum.cpp:16: /usr/include/c++/10/bits/stl_vector.h: In member function 'void MSToolkit::Spectrum::addEZState(MSToolkit::EZState&)': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h: In member function 'void MSToolkit::Spectrum::addEZState(int, double, float, float)': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:72, from ./include/Spectrum.h:20, from ./src/MSToolkit/Spectrum.cpp:16: /usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const MSToolkit::ZState&}; _Tp = MSToolkit::ZState; _Alloc = std::allocator]': /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:67, from ./include/Spectrum.h:20, from ./src/MSToolkit/Spectrum.cpp:16: /usr/include/c++/10/bits/stl_vector.h: In member function 'MSToolkit::Spectrum& MSToolkit::Spectrum::operator=(const MSToolkit::Spectrum&)': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h: In member function 'void MSToolkit::Spectrum::addZState(MSToolkit::ZState&)': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h: In member function 'void MSToolkit::Spectrum::addZState(int, double)': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h: In copy constructor 'MSToolkit::Spectrum::Spectrum(const MSToolkit::Spectrum&)': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ g++ -O3 -static -g -I. -I./include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DGCC -DHAVE_EXPAT_CONFIG_H ./src/MSToolkit/MSObject.cpp -c In file included from /usr/include/c++/10/vector:72, from ./include/Spectrum.h:20, from ./include/MSObject.h:20, from ./src/MSToolkit/MSObject.cpp:16: /usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const MSToolkit::Spectrum&}; _Tp = MSToolkit::Spectrum; _Alloc = std::allocator]': /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:67, from ./include/Spectrum.h:20, from ./include/MSObject.h:20, from ./src/MSToolkit/MSObject.cpp:16: /usr/include/c++/10/bits/stl_vector.h: In member function 'void MSToolkit::MSObject::add(MSToolkit::Spectrum&)': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h: In copy constructor 'MSToolkit::MSObject::MSObject(const MSToolkit::MSObject&)': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h: In member function 'MSToolkit::MSObject& MSToolkit::MSObject::operator=(const MSToolkit::MSObject&)': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ g++ -O3 -static -g -I. -I./include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DGCC -DHAVE_EXPAT_CONFIG_H ./src/MSToolkit/mzMLWriter.cpp -c ./src/MSToolkit/mzMLWriter.cpp: In member function 'bool MSToolkit::MzMLWriter::writeSpectra(MSToolkit::MSObject&)': ./src/MSToolkit/mzMLWriter.cpp:260:1: warning: no return statement in function returning non-void [-Wreturn-type] 260 | } | ^ In file included from /usr/include/c++/10/vector:72, from ./include/Spectrum.h:20, from ./include/MSObject.h:20, from ./include/mzMLWriter.h:21, from ./src/MSToolkit/mzMLWriter.cpp:16: /usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]': /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const MSToolkit::sMzMLIndex&}; _Tp = MSToolkit::sMzMLIndex; _Alloc = std::allocator]': /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 In file included from /usr/include/c++/10/vector:67, from ./include/Spectrum.h:20, from ./include/MSObject.h:20, from ./include/mzMLWriter.h:21, from ./src/MSToolkit/mzMLWriter.cpp:16: /usr/include/c++/10/bits/stl_vector.h: In member function 'bool MSToolkit::MzMLWriter::exportBinaryDataArray(BasicChromatogram&, bool, int)': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h: In member function 'bool MSToolkit::MzMLWriter::exportChromatogram(BasicChromatogram&, int)': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:72, from ./include/Spectrum.h:20, from ./include/MSObject.h:20, from ./include/mzMLWriter.h:21, from ./src/MSToolkit/mzMLWriter.cpp:16: /usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]': /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:67, from ./include/Spectrum.h:20, from ./include/MSObject.h:20, from ./include/mzMLWriter.h:21, from ./src/MSToolkit/mzMLWriter.cpp:16: /usr/include/c++/10/bits/stl_vector.h: In member function 'bool MSToolkit::MzMLWriter::exportBinaryDataArray(MSToolkit::Spectrum&, bool, int)': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:72, from ./include/Spectrum.h:20, from ./include/MSObject.h:20, from ./include/mzMLWriter.h:21, from ./src/MSToolkit/mzMLWriter.cpp:16: /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:67, from ./include/Spectrum.h:20, from ./include/MSObject.h:20, from ./include/mzMLWriter.h:21, from ./src/MSToolkit/mzMLWriter.cpp:16: /usr/include/c++/10/bits/stl_vector.h: In member function 'bool MSToolkit::MzMLWriter::exportSpectrum(MSToolkit::Spectrum&, int)': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ g++ -O3 -static -g -I. -I./include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DGCC -DHAVE_EXPAT_CONFIG_H ./src/MSToolkit/pepXMLWriter.cpp -c g++ -O3 -static -g -I. -I./include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DGCC -DHAVE_EXPAT_CONFIG_H ./src/MSToolkit/MSReader.cpp -c g++ -O3 -static -g -I. -I./include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DGCC -DHAVE_EXPAT_CONFIG_H -D_NOSQLITE ./src/MSToolkit/MSReader.cpp -c -o MSReaderLite.o ar rcs libmstoolkitlite.a mzp.MSNumpress.o mzp.mzp_base64_lite.o mzp.BasicSpectrum_lite.o mzp.mzParser_lite.o mzp.RAMPface_lite.o mzp.saxhandler_lite.o mzp.saxmzmlhandler_lite.o mzp.saxmzxmlhandler_lite.o mzp.Czran_lite.o mzp.mz5handler_lite.o mzp.mzpMz5Config_lite.o mzp.mzpMz5Structs_lite.o mzp.BasicChromatogram_lite.o mzp.PWIZface_lite.o Spectrum.o MSObject.o mzMLWriter.o pepXMLWriter.o MSReaderLite.o ar rcs libmstoolkit.a mzp.MSNumpress.o mzp.mzp_base64.o mzp.BasicSpectrum.o mzp.mzParser.o mzp.RAMPface.o mzp.saxhandler.o mzp.saxmzmlhandler.o mzp.saxmzxmlhandler.o mzp.Czran.o mzp.mz5handler.o mzp.mzpMz5Config.o mzp.mzpMz5Structs.o mzp.BasicChromatogram.o mzp.PWIZface.o Spectrum.o MSObject.o mzMLWriter.o pepXMLWriter.o MSReader.o make[3]: Leaving directory '/build/libmstoolkit-82' make solib make[3]: Entering directory '/build/libmstoolkit-82' rm -f *.o msSingleScan.* g++ -O3 -shared -fPIC -g -I. -I./include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DGCC -DHAVE_EXPAT_CONFIG_H src/mzParser/MSNumpress.cpp -c -o mzp.MSNumpress.o g++ -O3 -shared -fPIC -g -I. -I./include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DGCC -DHAVE_EXPAT_CONFIG_H src/mzParser/mzp_base64.cpp -c -o mzp.mzp_base64.o g++ -O3 -shared -fPIC -g -I. -I./include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DGCC -DHAVE_EXPAT_CONFIG_H src/mzParser/BasicSpectrum.cpp -c -o mzp.BasicSpectrum.o In file included from /usr/include/c++/10/vector:72, from ./include/mzParser.h:26, from src/mzParser/BasicSpectrum.cpp:8: /usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const specDP&}; _Tp = specDP; _Alloc = std::allocator]': /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:67, from ./include/mzParser.h:26, from src/mzParser/BasicSpectrum.cpp:8: /usr/include/c++/10/bits/stl_vector.h: In member function 'void BasicSpectrum::addDP(specDP)': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:72, from ./include/mzParser.h:26, from src/mzParser/BasicSpectrum.cpp:8: /usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const sPrecursorIon&}; _Tp = sPrecursorIon; _Alloc = std::allocator]': /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:67, from ./include/mzParser.h:26, from src/mzParser/BasicSpectrum.cpp:8: /usr/include/c++/10/bits/stl_vector.h: In member function 'BasicSpectrum& BasicSpectrum::operator=(const BasicSpectrum&)': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h: In copy constructor 'BasicSpectrum::BasicSpectrum(const BasicSpectrum&)': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h: In member function 'void BasicSpectrum::setPrecursorIon(sPrecursorIon&)': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ g++ -O3 -shared -fPIC -g -I. -I./include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DGCC -DHAVE_EXPAT_CONFIG_H src/mzParser/mzParser.cpp -c -o mzp.mzParser.o g++ -O3 -shared -fPIC -g -I. -I./include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DGCC -DHAVE_EXPAT_CONFIG_H src/mzParser/RAMPface.cpp -c -o mzp.RAMPface.o g++ -O3 -shared -fPIC -g -I. -I./include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DGCC -DHAVE_EXPAT_CONFIG_H src/mzParser/saxhandler.cpp -c -o mzp.saxhandler.o g++ -O3 -shared -fPIC -g -I. -I./include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DGCC -DHAVE_EXPAT_CONFIG_H src/mzParser/saxmzmlhandler.cpp -c -o mzp.saxmzmlhandler.o In file included from /usr/include/c++/10/vector:72, from ./include/mzParser.h:26, from src/mzParser/saxmzmlhandler.cpp:36: /usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const cindex&}; _Tp = cindex; _Alloc = std::allocator]': /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]': /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 /usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]': /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 In file included from /usr/include/c++/10/vector:67, from ./include/mzParser.h:26, from src/mzParser/saxmzmlhandler.cpp:36: /usr/include/c++/10/bits/stl_vector.h: In member function 'void mzpSAXMzmlHandler::decode(std::vector&)': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:72, from ./include/mzParser.h:26, from src/mzParser/saxmzmlhandler.cpp:36: /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:67, from ./include/mzParser.h:26, from src/mzParser/saxmzmlhandler.cpp:36: /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:72, from ./include/mzParser.h:26, from src/mzParser/saxmzmlhandler.cpp:36: /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:67, from ./include/mzParser.h:26, from src/mzParser/saxmzmlhandler.cpp:36: /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h: In member function 'virtual void mzpSAXMzmlHandler::endElement(const XML_Char*)': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ g++ -O3 -shared -fPIC -g -I. -I./include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DGCC -DHAVE_EXPAT_CONFIG_H src/mzParser/saxmzxmlhandler.cpp -c -o mzp.saxmzxmlhandler.o In file included from /usr/include/c++/10/vector:72, from ./include/mzParser.h:26, from src/mzParser/saxmzxmlhandler.cpp:21: /usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const cindex&}; _Tp = cindex; _Alloc = std::allocator]': /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]': /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 In file included from /usr/include/c++/10/vector:67, from ./include/mzParser.h:26, from src/mzParser/saxmzxmlhandler.cpp:21: /usr/include/c++/10/bits/stl_vector.h: In member function 'void mzpSAXMzxmlHandler::decode64()': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h: In member function 'void mzpSAXMzxmlHandler::decompress64()': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:72, from ./include/mzParser.h:26, from src/mzParser/saxmzxmlhandler.cpp:21: /usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]': /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/vector.tcc: In member function 'void mzpSAXMzxmlHandler::decode32()': /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/vector.tcc: In member function 'void mzpSAXMzxmlHandler::decompress32()': /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:67, from ./include/mzParser.h:26, from src/mzParser/saxmzxmlhandler.cpp:21: /usr/include/c++/10/bits/stl_vector.h: In member function 'virtual void mzpSAXMzxmlHandler::endElement(const XML_Char*)': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ g++ -O3 -shared -fPIC -g -I. -I./include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DGCC -DHAVE_EXPAT_CONFIG_H src/mzParser/Czran.cpp -c -o mzp.Czran.o g++ -O3 -shared -fPIC -g -I. -I./include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DGCC -DHAVE_EXPAT_CONFIG_H src/mzParser/mz5handler.cpp -c -o mzp.mz5handler.o g++ -O3 -shared -fPIC -g -I. -I./include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DGCC -DHAVE_EXPAT_CONFIG_H src/mzParser/mzpMz5Config.cpp -c -o mzp.mzpMz5Config.o g++ -O3 -shared -fPIC -g -I. -I./include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DGCC -DHAVE_EXPAT_CONFIG_H src/mzParser/mzpMz5Structs.cpp -c -o mzp.mzpMz5Structs.o g++ -O3 -shared -fPIC -g -I. -I./include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DGCC -DHAVE_EXPAT_CONFIG_H src/mzParser/BasicChromatogram.cpp -c -o mzp.BasicChromatogram.o In file included from /usr/include/c++/10/vector:72, from ./include/mzParser.h:26, from src/mzParser/BasicChromatogram.cpp:11: /usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const TimeIntensityPair&}; _Tp = TimeIntensityPair; _Alloc = std::allocator]': /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:67, from ./include/mzParser.h:26, from src/mzParser/BasicChromatogram.cpp:11: /usr/include/c++/10/bits/stl_vector.h: In member function 'void BasicChromatogram::addTIP(TimeIntensityPair)': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h: In copy constructor 'BasicChromatogram::BasicChromatogram(const BasicChromatogram&)': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h: In member function 'BasicChromatogram& BasicChromatogram::operator=(const BasicChromatogram&)': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ g++ -O3 -shared -fPIC -g -I. -I./include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DGCC -DHAVE_EXPAT_CONFIG_H src/mzParser/PWIZface.cpp -c -o mzp.PWIZface.o g++ -O3 -shared -fPIC -g -I. -I./include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DGCC -DHAVE_EXPAT_CONFIG_H src/mzParser/mzp_base64.cpp -c -o mzp.mzp_base64_lite.o g++ -O3 -shared -fPIC -g -I. -I./include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DGCC -DHAVE_EXPAT_CONFIG_H src/mzParser/BasicSpectrum.cpp -c -o mzp.BasicSpectrum_lite.o In file included from /usr/include/c++/10/vector:72, from ./include/mzParser.h:26, from src/mzParser/BasicSpectrum.cpp:8: /usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const specDP&}; _Tp = specDP; _Alloc = std::allocator]': /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:67, from ./include/mzParser.h:26, from src/mzParser/BasicSpectrum.cpp:8: /usr/include/c++/10/bits/stl_vector.h: In member function 'void BasicSpectrum::addDP(specDP)': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:72, from ./include/mzParser.h:26, from src/mzParser/BasicSpectrum.cpp:8: /usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const sPrecursorIon&}; _Tp = sPrecursorIon; _Alloc = std::allocator]': /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:67, from ./include/mzParser.h:26, from src/mzParser/BasicSpectrum.cpp:8: /usr/include/c++/10/bits/stl_vector.h: In member function 'BasicSpectrum& BasicSpectrum::operator=(const BasicSpectrum&)': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h: In copy constructor 'BasicSpectrum::BasicSpectrum(const BasicSpectrum&)': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h: In member function 'void BasicSpectrum::setPrecursorIon(sPrecursorIon&)': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ g++ -O3 -shared -fPIC -g -I. -I./include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DGCC -DHAVE_EXPAT_CONFIG_H src/mzParser/mzParser.cpp -c -o mzp.mzParser_lite.o g++ -O3 -shared -fPIC -g -I. -I./include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DGCC -DHAVE_EXPAT_CONFIG_H src/mzParser/RAMPface.cpp -c -o mzp.RAMPface_lite.o g++ -O3 -shared -fPIC -g -I. -I./include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DGCC -DHAVE_EXPAT_CONFIG_H src/mzParser/saxhandler.cpp -c -o mzp.saxhandler_lite.o g++ -O3 -shared -fPIC -g -I. -I./include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DGCC -DHAVE_EXPAT_CONFIG_H src/mzParser/saxmzmlhandler.cpp -c -o mzp.saxmzmlhandler_lite.o In file included from /usr/include/c++/10/vector:72, from ./include/mzParser.h:26, from src/mzParser/saxmzmlhandler.cpp:36: /usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const cindex&}; _Tp = cindex; _Alloc = std::allocator]': /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]': /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 /usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]': /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 In file included from /usr/include/c++/10/vector:67, from ./include/mzParser.h:26, from src/mzParser/saxmzmlhandler.cpp:36: /usr/include/c++/10/bits/stl_vector.h: In member function 'void mzpSAXMzmlHandler::decode(std::vector&)': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:72, from ./include/mzParser.h:26, from src/mzParser/saxmzmlhandler.cpp:36: /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:67, from ./include/mzParser.h:26, from src/mzParser/saxmzmlhandler.cpp:36: /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:72, from ./include/mzParser.h:26, from src/mzParser/saxmzmlhandler.cpp:36: /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:67, from ./include/mzParser.h:26, from src/mzParser/saxmzmlhandler.cpp:36: /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h: In member function 'virtual void mzpSAXMzmlHandler::endElement(const XML_Char*)': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ g++ -O3 -shared -fPIC -g -I. -I./include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DGCC -DHAVE_EXPAT_CONFIG_H src/mzParser/saxmzxmlhandler.cpp -c -o mzp.saxmzxmlhandler_lite.o In file included from /usr/include/c++/10/vector:72, from ./include/mzParser.h:26, from src/mzParser/saxmzxmlhandler.cpp:21: /usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const cindex&}; _Tp = cindex; _Alloc = std::allocator]': /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]': /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 In file included from /usr/include/c++/10/vector:67, from ./include/mzParser.h:26, from src/mzParser/saxmzxmlhandler.cpp:21: /usr/include/c++/10/bits/stl_vector.h: In member function 'void mzpSAXMzxmlHandler::decode64()': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h: In member function 'void mzpSAXMzxmlHandler::decompress64()': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:72, from ./include/mzParser.h:26, from src/mzParser/saxmzxmlhandler.cpp:21: /usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]': /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/vector.tcc: In member function 'void mzpSAXMzxmlHandler::decode32()': /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/vector.tcc: In member function 'void mzpSAXMzxmlHandler::decompress32()': /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:67, from ./include/mzParser.h:26, from src/mzParser/saxmzxmlhandler.cpp:21: /usr/include/c++/10/bits/stl_vector.h: In member function 'virtual void mzpSAXMzxmlHandler::endElement(const XML_Char*)': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ g++ -O3 -shared -fPIC -g -I. -I./include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DGCC -DHAVE_EXPAT_CONFIG_H src/mzParser/Czran.cpp -c -o mzp.Czran_lite.o g++ -O3 -shared -fPIC -g -I. -I./include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DGCC -DHAVE_EXPAT_CONFIG_H src/mzParser/mz5handler.cpp -c -o mzp.mz5handler_lite.o g++ -O3 -shared -fPIC -g -I. -I./include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DGCC -DHAVE_EXPAT_CONFIG_H src/mzParser/mzpMz5Config.cpp -c -o mzp.mzpMz5Config_lite.o g++ -O3 -shared -fPIC -g -I. -I./include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DGCC -DHAVE_EXPAT_CONFIG_H src/mzParser/mzpMz5Structs.cpp -c -o mzp.mzpMz5Structs_lite.o g++ -O3 -shared -fPIC -g -I. -I./include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DGCC -DHAVE_EXPAT_CONFIG_H src/mzParser/BasicChromatogram.cpp -c -o mzp.BasicChromatogram_lite.o In file included from /usr/include/c++/10/vector:72, from ./include/mzParser.h:26, from src/mzParser/BasicChromatogram.cpp:11: /usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const TimeIntensityPair&}; _Tp = TimeIntensityPair; _Alloc = std::allocator]': /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:67, from ./include/mzParser.h:26, from src/mzParser/BasicChromatogram.cpp:11: /usr/include/c++/10/bits/stl_vector.h: In member function 'void BasicChromatogram::addTIP(TimeIntensityPair)': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h: In copy constructor 'BasicChromatogram::BasicChromatogram(const BasicChromatogram&)': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h: In member function 'BasicChromatogram& BasicChromatogram::operator=(const BasicChromatogram&)': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ g++ -O3 -shared -fPIC -g -I. -I./include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DGCC -DHAVE_EXPAT_CONFIG_H src/mzParser/PWIZface.cpp -c -o mzp.PWIZface_lite.o g++ -O3 -shared -fPIC -g -I. -I./include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DGCC -DHAVE_EXPAT_CONFIG_H ./src/MSToolkit/Spectrum.cpp -c In file included from /usr/include/c++/10/vector:72, from ./include/Spectrum.h:20, from ./src/MSToolkit/Spectrum.cpp:16: /usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]': /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:67, from ./include/Spectrum.h:20, from ./src/MSToolkit/Spectrum.cpp:16: /usr/include/c++/10/bits/stl_vector.h: In member function 'void MSToolkit::Spectrum::addMZ(double, double)': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h: In member function 'void MSToolkit::Spectrum::setMZ(double, double)': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:72, from ./include/Spectrum.h:20, from ./src/MSToolkit/Spectrum.cpp:16: /usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const MSToolkit::Peak_T&}; _Tp = MSToolkit::Peak_T; _Alloc = std::allocator]': /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:67, from ./include/Spectrum.h:20, from ./src/MSToolkit/Spectrum.cpp:16: /usr/include/c++/10/bits/stl_vector.h: In member function 'void MSToolkit::Spectrum::setPeaks(std::vector)': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h: In member function 'void MSToolkit::Spectrum::add(MSToolkit::Peak_T&)': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h: In member function 'void MSToolkit::Spectrum::add(double, float)': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:72, from ./include/Spectrum.h:20, from ./src/MSToolkit/Spectrum.cpp:16: /usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const MSToolkit::EZState&}; _Tp = MSToolkit::EZState; _Alloc = std::allocator]': /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:67, from ./include/Spectrum.h:20, from ./src/MSToolkit/Spectrum.cpp:16: /usr/include/c++/10/bits/stl_vector.h: In member function 'void MSToolkit::Spectrum::addEZState(MSToolkit::EZState&)': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h: In member function 'void MSToolkit::Spectrum::addEZState(int, double, float, float)': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:72, from ./include/Spectrum.h:20, from ./src/MSToolkit/Spectrum.cpp:16: /usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const MSToolkit::ZState&}; _Tp = MSToolkit::ZState; _Alloc = std::allocator]': /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:67, from ./include/Spectrum.h:20, from ./src/MSToolkit/Spectrum.cpp:16: /usr/include/c++/10/bits/stl_vector.h: In member function 'MSToolkit::Spectrum& MSToolkit::Spectrum::operator=(const MSToolkit::Spectrum&)': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h: In member function 'void MSToolkit::Spectrum::addZState(MSToolkit::ZState&)': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h: In member function 'void MSToolkit::Spectrum::addZState(int, double)': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h: In copy constructor 'MSToolkit::Spectrum::Spectrum(const MSToolkit::Spectrum&)': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ g++ -O3 -shared -fPIC -g -I. -I./include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DGCC -DHAVE_EXPAT_CONFIG_H ./src/MSToolkit/MSObject.cpp -c In file included from /usr/include/c++/10/vector:72, from ./include/Spectrum.h:20, from ./include/MSObject.h:20, from ./src/MSToolkit/MSObject.cpp:16: /usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const MSToolkit::Spectrum&}; _Tp = MSToolkit::Spectrum; _Alloc = std::allocator]': /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:67, from ./include/Spectrum.h:20, from ./include/MSObject.h:20, from ./src/MSToolkit/MSObject.cpp:16: /usr/include/c++/10/bits/stl_vector.h: In member function 'void MSToolkit::MSObject::add(MSToolkit::Spectrum&)': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h: In copy constructor 'MSToolkit::MSObject::MSObject(const MSToolkit::MSObject&)': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h: In member function 'MSToolkit::MSObject& MSToolkit::MSObject::operator=(const MSToolkit::MSObject&)': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ g++ -O3 -shared -fPIC -g -I. -I./include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DGCC -DHAVE_EXPAT_CONFIG_H ./src/MSToolkit/mzMLWriter.cpp -c ./src/MSToolkit/mzMLWriter.cpp: In member function 'bool MSToolkit::MzMLWriter::writeSpectra(MSToolkit::MSObject&)': ./src/MSToolkit/mzMLWriter.cpp:260:1: warning: no return statement in function returning non-void [-Wreturn-type] 260 | } | ^ In file included from /usr/include/c++/10/vector:72, from ./include/Spectrum.h:20, from ./include/MSObject.h:20, from ./include/mzMLWriter.h:21, from ./src/MSToolkit/mzMLWriter.cpp:16: /usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator]': /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const MSToolkit::sMzMLIndex&}; _Tp = MSToolkit::sMzMLIndex; _Alloc = std::allocator]': /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 In file included from /usr/include/c++/10/vector:67, from ./include/Spectrum.h:20, from ./include/MSObject.h:20, from ./include/mzMLWriter.h:21, from ./src/MSToolkit/mzMLWriter.cpp:16: /usr/include/c++/10/bits/stl_vector.h: In member function 'bool MSToolkit::MzMLWriter::exportBinaryDataArray(BasicChromatogram&, bool, int)': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /usr/include/c++/10/bits/stl_vector.h: In member function 'bool MSToolkit::MzMLWriter::exportChromatogram(BasicChromatogram&, int)': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:72, from ./include/Spectrum.h:20, from ./include/MSObject.h:20, from ./include/mzMLWriter.h:21, from ./src/MSToolkit/mzMLWriter.cpp:16: /usr/include/c++/10/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator]': /usr/include/c++/10/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector::iterator' changed in GCC 7.1 426 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:67, from ./include/Spectrum.h:20, from ./include/MSObject.h:20, from ./include/mzMLWriter.h:21, from ./src/MSToolkit/mzMLWriter.cpp:16: /usr/include/c++/10/bits/stl_vector.h: In member function 'bool MSToolkit::MzMLWriter::exportBinaryDataArray(MSToolkit::Spectrum&, bool, int)': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:72, from ./include/Spectrum.h:20, from ./include/MSObject.h:20, from ./include/mzMLWriter.h:21, from ./src/MSToolkit/mzMLWriter.cpp:16: /usr/include/c++/10/bits/vector.tcc:121:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 121 | _M_realloc_insert(end(), std::forward<_Args>(__args)...); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/10/vector:67, from ./include/Spectrum.h:20, from ./include/MSObject.h:20, from ./include/mzMLWriter.h:21, from ./src/MSToolkit/mzMLWriter.cpp:16: /usr/include/c++/10/bits/stl_vector.h: In member function 'bool MSToolkit::MzMLWriter::exportSpectrum(MSToolkit::Spectrum&, int)': /usr/include/c++/10/bits/stl_vector.h:1198:21: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator >' changed in GCC 7.1 1198 | _M_realloc_insert(end(), __x); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ g++ -O3 -shared -fPIC -g -I. -I./include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DGCC -DHAVE_EXPAT_CONFIG_H ./src/MSToolkit/pepXMLWriter.cpp -c g++ -O3 -shared -fPIC -g -I. -I./include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DGCC -DHAVE_EXPAT_CONFIG_H ./src/MSToolkit/MSReader.cpp -c g++ -O3 -shared -fPIC -g -I. -I./include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DGCC -DHAVE_EXPAT_CONFIG_H -D_NOSQLITE ./src/MSToolkit/MSReader.cpp -c -o MSReaderLite.o g++ -O3 -shared -fPIC -g -I. -I./include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DGCC -DHAVE_EXPAT_CONFIG_H -o libmstoolkitlite.so.82.0.0 -Wl,-z,relro -Wl,-soname,libmstoolkitlite.so.82 mzp.MSNumpress.o mzp.mzp_base64_lite.o mzp.BasicSpectrum_lite.o mzp.mzParser_lite.o mzp.RAMPface_lite.o mzp.saxhandler_lite.o mzp.saxmzmlhandler_lite.o mzp.saxmzxmlhandler_lite.o mzp.Czran_lite.o mzp.mz5handler_lite.o mzp.mzpMz5Config_lite.o mzp.mzpMz5Structs_lite.o mzp.BasicChromatogram_lite.o mzp.PWIZface_lite.o Spectrum.o MSObject.o mzMLWriter.o pepXMLWriter.o MSReaderLite.o -lm -lpthread -ldl -lz -lsqlite3 -lexpat ln -sf libmstoolkitlite.so.82.0.0 libmstoolkitlite.so.82 ln -sf libmstoolkitlite.so.82 libmstoolkitlite.so g++ -O3 -shared -fPIC -g -I. -I./include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DGCC -DHAVE_EXPAT_CONFIG_H -o libmstoolkit.so.82.0.0 -Wl,-z,relro -Wl,-soname,libmstoolkit.so.82 mzp.MSNumpress.o mzp.mzp_base64.o mzp.BasicSpectrum.o mzp.mzParser.o mzp.RAMPface.o mzp.saxhandler.o mzp.saxmzmlhandler.o mzp.saxmzxmlhandler.o mzp.Czran.o mzp.mz5handler.o mzp.mzpMz5Config.o mzp.mzpMz5Structs.o mzp.BasicChromatogram.o mzp.PWIZface.o Spectrum.o MSObject.o mzMLWriter.o pepXMLWriter.o MSReader.o -lm -lpthread -ldl -lz -lsqlite3 -lexpat ln -sf libmstoolkit.so.82.0.0 libmstoolkit.so.82 ln -sf libmstoolkit.so.82 libmstoolkit.so # Be careful not to include in the linker command line below the compilation -shared -fPIC flags! g++ -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -DGCC -DHAVE_EXPAT_CONFIG_H -I./include -L. MSSingleScan/MSSingleScan.cpp -o msSingleScan -lm -lpthread -ldl -lz -lsqlite3 -lexpat -lmstoolkitlite make[3]: Leaving directory '/build/libmstoolkit-82' make[2]: Leaving directory '/build/libmstoolkit-82' make[1]: Leaving directory '/build/libmstoolkit-82' dh_auto_test create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary dh binary dh_testroot dh_prep rm -f -- debian/libmstoolkit-dev.substvars debian/libmstoolkit82.substvars debian/libmstoolkit-tools.substvars rm -fr -- debian/.debhelper/generated/libmstoolkit-dev/ debian/libmstoolkit-dev/ debian/tmp/ debian/.debhelper/generated/libmstoolkit82/ debian/libmstoolkit82/ debian/.debhelper/generated/libmstoolkit-tools/ debian/libmstoolkit-tools/ dh_installdirs install -d debian/libmstoolkit-dev/usr/lib debian/libmstoolkit-dev/usr/include debian/libmstoolkit-dev/usr/include/libmstoolkit install -d debian/libmstoolkit82/usr/lib install -d debian/libmstoolkit-tools/usr/bin dh_auto_install install -d /build/libmstoolkit-82/debian/tmp dh_install cp --reflink=auto -a ./include/MSNumpress.hpp ./include/MSObject.h ./include/MSReader.h ./include/MSToolkitTypes.h ./include/RAWReader.h ./include/Spectrum.h ./include/mzMLWriter.h ./include/mzParser.h ./include/pepXMLWriter.h debian/libmstoolkit-dev/usr/include/libmstoolkit/ cp --reflink=auto -a ./libmstoolkit.a ./libmstoolkitlite.a debian/libmstoolkit-dev/usr/lib/ install -d debian/.debhelper/generated/libmstoolkit-dev cp --reflink=auto -a ./libmstoolkit.so.82.0.0 ./libmstoolkitlite.so.82.0.0 debian/libmstoolkit82/usr/lib/ install -d debian/.debhelper/generated/libmstoolkit82 cp --reflink=auto -a ./msSingleScan debian/libmstoolkit-tools/usr/bin/ install -d debian/.debhelper/generated/libmstoolkit-tools dh_installdocs install -d debian/libmstoolkit-dev/usr/share/doc/libmstoolkit-dev install -p -m0644 debian/copyright debian/libmstoolkit-dev/usr/share/doc/libmstoolkit-dev/copyright install -d debian/libmstoolkit82/usr/share/doc/libmstoolkit82 install -p -m0644 debian/copyright debian/libmstoolkit82/usr/share/doc/libmstoolkit82/copyright install -d debian/libmstoolkit-tools/usr/share/doc/libmstoolkit-tools install -p -m0644 debian/copyright debian/libmstoolkit-tools/usr/share/doc/libmstoolkit-tools/copyright dh_installchangelogs install -p -m0644 debian/changelog debian/libmstoolkit82/usr/share/doc/libmstoolkit82/changelog.Debian install -p -m0644 debian/changelog debian/libmstoolkit-tools/usr/share/doc/libmstoolkit-tools/changelog.Debian install -p -m0644 debian/changelog debian/libmstoolkit-dev/usr/share/doc/libmstoolkit-dev/changelog.Debian dh_installman install -d debian/libmstoolkit82/usr/share/man/man3/ install -p -m0644 ./debian/libmstoolkit.3 debian/libmstoolkit82/usr/share/man/man3/libmstoolkit.3 man-recode --to-code UTF-8 --suffix .dh-new debian/libmstoolkit82/usr/share/man/man3/libmstoolkit.3 mv debian/libmstoolkit82/usr/share/man/man3/libmstoolkit.3.dh-new debian/libmstoolkit82/usr/share/man/man3/libmstoolkit.3 chmod 0644 -- debian/libmstoolkit82/usr/share/man/man3/libmstoolkit.3 dh_lintian install -d debian/libmstoolkit82/usr/share/lintian/overrides install -p -m0644 debian/libmstoolkit82.lintian-overrides debian/libmstoolkit82/usr/share/lintian/overrides/libmstoolkit82 dh_perl dh_link install -d debian/libmstoolkit-dev/usr/share/man/man3 rm -f debian/libmstoolkit-dev/usr/share/man/man3/libmstoolkit-dev.3.gz ln -s libmstoolkit.3.gz debian/libmstoolkit-dev/usr/share/man/man3/libmstoolkit-dev.3.gz rm -f debian/libmstoolkit-dev/usr/lib/libmstoolkitlite.so ln -s libmstoolkitlite.so.82.0.0 debian/libmstoolkit-dev/usr/lib/libmstoolkitlite.so rm -f debian/libmstoolkit-dev/usr/lib/libmstoolkit.so ln -s libmstoolkit.so.82.0.0 debian/libmstoolkit-dev/usr/lib/libmstoolkit.so rm -f debian/libmstoolkit82/usr/lib/libmstoolkitlite.so.82 ln -s libmstoolkitlite.so.82.0.0 debian/libmstoolkit82/usr/lib/libmstoolkitlite.so.82 rm -f debian/libmstoolkit82/usr/lib/libmstoolkit.so.82 ln -s libmstoolkit.so.82.0.0 debian/libmstoolkit82/usr/lib/libmstoolkit.so.82 install -d debian/libmstoolkit-tools/usr/share/man/man1 rm -f debian/libmstoolkit-tools/usr/share/man/man1/msSingleScan.1.gz ln -s ../man3/libmstoolkit.3.gz debian/libmstoolkit-tools/usr/share/man/man1/msSingleScan.1.gz dh_strip_nondeterminism dh_compress cd debian/libmstoolkit-dev cd debian/libmstoolkit82 cd debian/libmstoolkit-tools chmod a-x usr/share/doc/libmstoolkit-tools/changelog.Debian chmod a-x usr/share/doc/libmstoolkit-dev/changelog.Debian chmod a-x usr/share/doc/libmstoolkit82/changelog.Debian usr/share/man/man3/libmstoolkit.3 gzip -9nf usr/share/doc/libmstoolkit-tools/changelog.Debian gzip -9nf usr/share/doc/libmstoolkit82/changelog.Debian usr/share/man/man3/libmstoolkit.3 gzip -9nf usr/share/doc/libmstoolkit-dev/changelog.Debian cd '/build/libmstoolkit-82' cd '/build/libmstoolkit-82' cd '/build/libmstoolkit-82' dh_fixperms find debian/libmstoolkit-dev -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/libmstoolkit82 -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/libmstoolkit-tools -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/libmstoolkit-tools ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/libmstoolkit-dev ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/libmstoolkit82 ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/libmstoolkit-tools/usr/share/doc -type f -a -true -a ! -regex 'debian/libmstoolkit-tools/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libmstoolkit-dev/usr/share/doc -type f -a -true -a ! -regex 'debian/libmstoolkit-dev/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libmstoolkit82/usr/share/doc -type f -a -true -a ! -regex 'debian/libmstoolkit82/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libmstoolkit-tools/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/libmstoolkit-dev/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/libmstoolkit82/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/libmstoolkit-tools/usr/share/man -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libmstoolkit-dev/usr/share/man debian/libmstoolkit-dev/usr/include -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libmstoolkit82/usr/share/man debian/libmstoolkit82/usr/share/lintian/overrides -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libmstoolkit-tools -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libmstoolkit82 -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libmstoolkit-dev -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/libmstoolkit-tools/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x find debian/libmstoolkit82/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w find debian/libmstoolkit-dev/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w dh_missing dh_dwz install -d debian/libmstoolkit82/usr/lib/debug/.dwz/arm-linux-gnueabihf dwz -mdebian/libmstoolkit82/usr/lib/debug/.dwz/arm-linux-gnueabihf/libmstoolkit82.debug -M/usr/lib/debug/.dwz/arm-linux-gnueabihf/libmstoolkit82.debug -- debian/libmstoolkit82/usr/lib/libmstoolkit.so.82.0.0 debian/libmstoolkit82/usr/lib/libmstoolkitlite.so.82.0.0 objcopy --compress-debug-sections debian/libmstoolkit82/usr/lib/debug/.dwz/arm-linux-gnueabihf/libmstoolkit82.debug dwz -- debian/libmstoolkit-tools/usr/bin/msSingleScan dwz: debian/libmstoolkit-tools/usr/bin/msSingleScan: .debug_info section not present dh_strip strip --strip-debug --remove-section=.comment --remove-section=.note --enable-deterministic-archives -R .gnu.lto_\* -R .gnu.debuglto_\* -N __gnu_lto_slim -N __gnu_lto_v1 debian/libmstoolkit-dev/usr/lib/libmstoolkitlite.a install -d debian/.debhelper/libmstoolkit-tools/dbgsym-root/usr/lib/debug/.build-id/23 objcopy --only-keep-debug --compress-debug-sections debian/libmstoolkit-tools/usr/bin/msSingleScan debian/.debhelper/libmstoolkit-tools/dbgsym-root/usr/lib/debug/.build-id/23/dc5247a2ea64b06912af0abcd24909997942e1.debug install -d debian/.debhelper/libmstoolkit82/dbgsym-root/usr/lib/debug/.build-id/9b objcopy --only-keep-debug --compress-debug-sections debian/libmstoolkit82/usr/lib/libmstoolkitlite.so.82.0.0 debian/.debhelper/libmstoolkit82/dbgsym-root/usr/lib/debug/.build-id/9b/cfe59f408ba001e94b477971fbc5f268bb8ad7.debug chmod 0644 -- debian/.debhelper/libmstoolkit-tools/dbgsym-root/usr/lib/debug/.build-id/23/dc5247a2ea64b06912af0abcd24909997942e1.debug chown 0:0 -- debian/.debhelper/libmstoolkit-tools/dbgsym-root/usr/lib/debug/.build-id/23/dc5247a2ea64b06912af0abcd24909997942e1.debug strip --remove-section=.comment --remove-section=.note debian/libmstoolkit-tools/usr/bin/msSingleScan objcopy --add-gnu-debuglink debian/.debhelper/libmstoolkit-tools/dbgsym-root/usr/lib/debug/.build-id/23/dc5247a2ea64b06912af0abcd24909997942e1.debug debian/libmstoolkit-tools/usr/bin/msSingleScan install -d debian/.debhelper/libmstoolkit-tools/dbgsym-root/usr/share/doc ln -s libmstoolkit-tools debian/.debhelper/libmstoolkit-tools/dbgsym-root/usr/share/doc/libmstoolkit-tools-dbgsym strip --strip-debug --remove-section=.comment --remove-section=.note --enable-deterministic-archives -R .gnu.lto_\* -R .gnu.debuglto_\* -N __gnu_lto_slim -N __gnu_lto_v1 debian/libmstoolkit-dev/usr/lib/libmstoolkit.a chmod 0644 -- debian/.debhelper/libmstoolkit82/dbgsym-root/usr/lib/debug/.build-id/9b/cfe59f408ba001e94b477971fbc5f268bb8ad7.debug chown 0:0 -- debian/.debhelper/libmstoolkit82/dbgsym-root/usr/lib/debug/.build-id/9b/cfe59f408ba001e94b477971fbc5f268bb8ad7.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libmstoolkit82/usr/lib/libmstoolkitlite.so.82.0.0 objcopy --add-gnu-debuglink debian/.debhelper/libmstoolkit82/dbgsym-root/usr/lib/debug/.build-id/9b/cfe59f408ba001e94b477971fbc5f268bb8ad7.debug debian/libmstoolkit82/usr/lib/libmstoolkitlite.so.82.0.0 install -d debian/.debhelper/libmstoolkit82/dbgsym-root/usr/lib/debug/.build-id/95 objcopy --only-keep-debug --compress-debug-sections debian/libmstoolkit82/usr/lib/libmstoolkit.so.82.0.0 debian/.debhelper/libmstoolkit82/dbgsym-root/usr/lib/debug/.build-id/95/87ef4f6b3aa0c2c3bcfaf7f591ed0a5663e982.debug chmod 0644 -- debian/.debhelper/libmstoolkit82/dbgsym-root/usr/lib/debug/.build-id/95/87ef4f6b3aa0c2c3bcfaf7f591ed0a5663e982.debug chown 0:0 -- debian/.debhelper/libmstoolkit82/dbgsym-root/usr/lib/debug/.build-id/95/87ef4f6b3aa0c2c3bcfaf7f591ed0a5663e982.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/libmstoolkit82/usr/lib/libmstoolkit.so.82.0.0 objcopy --add-gnu-debuglink debian/.debhelper/libmstoolkit82/dbgsym-root/usr/lib/debug/.build-id/95/87ef4f6b3aa0c2c3bcfaf7f591ed0a5663e982.debug debian/libmstoolkit82/usr/lib/libmstoolkit.so.82.0.0 install -d debian/.debhelper/libmstoolkit82/dbgsym-root/usr/lib/debug/.dwz cp --reflink=auto -a debian/libmstoolkit82/usr/lib/debug/.dwz/arm-linux-gnueabihf debian/.debhelper/libmstoolkit82/dbgsym-root/usr/lib/debug/.dwz rm -fr debian/libmstoolkit82/usr/lib/debug/.dwz rmdir -p --ignore-fail-on-non-empty debian/libmstoolkit82/usr/lib/debug install -d debian/.debhelper/libmstoolkit82/dbgsym-root/usr/share/doc ln -s libmstoolkit82 debian/.debhelper/libmstoolkit82/dbgsym-root/usr/share/doc/libmstoolkit82-dbgsym debian/rules override_dh_makeshlibs make[1]: Entering directory '/build/libmstoolkit-82' mkdir -p /build/libmstoolkit-82/debian/libmstoolkit82/DEBIAN dpkg-gensymbols -plibmstoolkit82 \ -v82 \ -c2 -d \ -e/build/libmstoolkit-82/libmstoolkitlite.so.82.0.0 \ -e/build/libmstoolkit-82/libmstoolkit.so.82.0.0 \ -O/build/libmstoolkit-82/debian/libmstoolkit82/DEBIAN/symbols dpkg-gensymbols: debug: Scanning /build/libmstoolkit-82/libmstoolkitlite.so.82.0.0 for symbol information dpkg-gensymbols: debug: Merging symbols from /build/libmstoolkit-82/libmstoolkitlite.so.82.0.0 as libmstoolkitlite.so.82 dpkg-gensymbols: debug: Scanning /build/libmstoolkit-82/libmstoolkit.so.82.0.0 for symbol information dpkg-gensymbols: warning: new libraries appeared in the symbols file: libmstoolkit.so.82 libmstoolkitlite.so.82 dpkg-gensymbols: warning: no debian/symbols file used as basis for generating /build/libmstoolkit-82/debian/libmstoolkit82/DEBIAN/symbols dpkg-gensymbols: debug: Merging symbols from /build/libmstoolkit-82/libmstoolkit.so.82.0.0 as libmstoolkit.so.82 dpkg-gensymbols: debug: Storing symbols in /build/libmstoolkit-82/debian/libmstoolkit82/DEBIAN/symbols. --- new_symbol_file (libmstoolkit82_82_armhf) +++ dpkg-gensymbolsoDfhe2 2021-07-14 01:18:15.399958940 -1200 @@ -0,0 +1,1033 @@ +libmstoolkit.so.82 libmstoolkit82 #MINVER# + _Z10b64_encodePcPKci@Base 82 + _Z10readHeaderP8RAMPFILExP16ScanHeaderStruct@Base 82 + _Z10readHeaderP8RAMPFILExP16ScanHeaderStructm@Base 82 + _Z11readMsLevelP8RAMPFILEx@Base 82 + _Z11readStartMzP8RAMPFILEx@Base 82 + _Z12getPrecursorPK16ScanHeaderStructiRdS2_S2_RiS3_RPi@Base 82 + _Z12getScanCachei@Base 82 + _Z12rampOpenFilePKc@Base 82 + _Z12rampSelfTestPc@Base 82 + _Z13checkFileTypePKc@Base 82 + _Z13freeScanCacheP15ScanCacheStruct@Base 82 + _Z13getCacheIndexP15ScanCacheStructi@Base 82 + _Z13rampCloseFileP8RAMPFILE@Base 82 + _Z13readRunHeaderP8RAMPFILEPxP15RunHeaderStructi@Base 82 + _Z13setRampOptionl@Base 82 + _Z14b64_decode_mioPcS_j@Base 82 + _Z14clearScanCacheP15ScanCacheStruct@Base 82 + _Z14getIndexOffsetP8RAMPFILE@Base 82 + _Z14isScanAveragedP16ScanHeaderStruct@Base 82 + _Z14readPeaksCountP8RAMPFILEx@Base 82 + _Z14readPeaksCountP8RAMPFILExm@Base 82 + _Z14shiftScanCacheP15ScanCacheStructi@Base 82 + _Z15readPeaksCachedP15ScanCacheStructiP8RAMPFILEx@Base 82 + _Z16getScanSpanRangePK16ScanHeaderStructPiS2_@Base 82 + _Z16rampTrimBaseNamePc@Base 82 + _Z16readHeaderCachedP15ScanCacheStructiP8RAMPFILEx@Base 82 + _Z17rampValidFileTypePKc@Base 82 + _Z17readMsLevelCachedP15ScanCacheStructiP8RAMPFILEx@Base 82 + _Z18isScanMergedResultP16ScanHeaderStruct@Base 82 + _Z19getInstrumentStructP8RAMPFILE@Base 82 + _Z22rampConstructInputPathPciPKcS1_@Base 82 + _Z26rampConstructInputFileNamePciPKc@Base 82 + _Z26rampConstructInputFileNameRKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base 82 + _Z26rampListSupportedFileTypesv@Base 82 + _Z33rampValidateOrDeriveInputFilenamePciS_@Base 82 + _Z9readEndMzP8RAMPFILEx@Base 82 + _Z9readIndexP8RAMPFILExPi@Base 82 + _Z9readMSRunP8RAMPFILEP15RunHeaderStruct@Base 82 + _Z9readPeaksP8RAMPFILEx@Base 82 + _Z9readPeaksP8RAMPFILExm@Base 82 + _ZN10MSDataFileC1ENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base 82 + _ZN10MSDataFileC2ENSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE@Base 82 + _ZN10MSDataFileD1Ev@Base 82 + _ZN10MSDataFileD2Ev@Base 82 + _ZN12Chromatogram21getTimeIntensityPairsERSt6vectorI17TimeIntensityPairSaIS1_EE@Base 82 + _ZN12ChromatogramC1Ev@Base 82 + _ZN12ChromatogramC2Ev@Base 82 + _ZN12ChromatogramD1Ev@Base 82 + _ZN12ChromatogramD2Ev@Base 82 + _ZN12PepXMLWriter11closePepXMLEv@Base 82 + _ZN12PepXMLWriter12createPepXMLEPcR17pxwMSMSRunSummaryP15pxwSampleEnzymeP16PXWSearchSummary@Base 82 + _ZN12PepXMLWriter12writeModInfoER10PXWModInfo@Base 82 + _ZN12PepXMLWriter14writeModAAMassER8pxwModAA@Base 82 + _ZN12PepXMLWriter14writeSearchHitER16pxwSearchHitPair@Base 82 + _ZN12PepXMLWriter15writeAltProteinER10pxwProtein@Base 82 + _ZN12PepXMLWriter18writeLinkedPeptideER12PXWSearchHitb@Base 82 + _ZN12PepXMLWriter18writeSpectrumQueryER16PXWSpectrumQuery@Base 82 + _ZN12PepXMLWriter6addTabEv@Base 82 + _ZN12PepXMLWriter9deleteTabEv@Base 82 + _ZN12PepXMLWriter9resetTabsEv@Base 82 + _ZN12PepXMLWriter9writeLineEPKc@Base 82 + _ZN12PepXMLWriterC1Ev@Base 82 + _ZN12PepXMLWriterC2Ev@Base 82 + _ZN12PepXMLWriterD1Ev@Base 82 + _ZN12PepXMLWriterD2Ev@Base 82 + _ZN13BasicSpectrum10getMSLevelEv@Base 82 + _ZN13BasicSpectrum10getScanNumEv@Base 82 + _ZN13BasicSpectrum10setMSLevelEi@Base 82 + _ZN13BasicSpectrum10setScanNumEi@Base 82 + _ZN13BasicSpectrum11getCentroidEv@Base 82 + _ZN13BasicSpectrum11getIDStringEPc@Base 82 + _ZN13BasicSpectrum11setCentroidEb@Base 82 + _ZN13BasicSpectrum11setIDStringEPc@Base 82 + _ZN13BasicSpectrum12getScanIndexEv@Base 82 + _ZN13BasicSpectrum12setScanIndexEi@Base 82 + _ZN13BasicSpectrum13getActivationEv@Base 82 + _ZN13BasicSpectrum13getBasePeakMZEv@Base 82 + _ZN13BasicSpectrum13getFilterLineEPc@Base 82 + _ZN13BasicSpectrum13getPeaksCountEv@Base 82 + _ZN13BasicSpectrum13setActivationEi@Base 82 + _ZN13BasicSpectrum13setBasePeakMZEd@Base 82 + _ZN13BasicSpectrum13setFilterLineEPc@Base 82 + _ZN13BasicSpectrum13setPeaksCountEi@Base 82 + _ZN13BasicSpectrum14getPrecursorMZEi@Base 82 + _ZN13BasicSpectrum15getPositiveScanEv@Base 82 + _ZN13BasicSpectrum15getPrecursorIonEi@Base 82 + _ZN13BasicSpectrum15setPositiveScanEb@Base 82 + _ZN13BasicSpectrum15setPrecursorIonER13sPrecursorIon@Base 82 + _ZN13BasicSpectrum18getCollisionEnergyEv@Base 82 + _ZN13BasicSpectrum18getPrecursorChargeEi@Base 82 + _ZN13BasicSpectrum18getTotalIonCurrentEv@Base 82 + _ZN13BasicSpectrum18setCollisionEnergyEd@Base 82 + _ZN13BasicSpectrum18setTotalIonCurrentEd@Base 82 + _ZN13BasicSpectrum19getIonInjectionTimeEv@Base 82 + _ZN13BasicSpectrum19getPrecursorScanNumEv@Base 82 + _ZN13BasicSpectrum19setIonInjectionTimeEd@Base 82 + _ZN13BasicSpectrum19setPrecursorScanNumEi@Base 82 + _ZN13BasicSpectrum20getBasePeakIntensityEv@Base 82 + _ZN13BasicSpectrum20getPrecursorIonCountEv@Base 82 + _ZN13BasicSpectrum20setBasePeakIntensityEd@Base 82 + _ZN13BasicSpectrum22getCompensationVoltageEv@Base 82 + _ZN13BasicSpectrum22setCompensationVoltageEd@Base 82 + _ZN13BasicSpectrum4sizeEv@Base 82 + _ZN13BasicSpectrum5addDPE6specDP@Base 82 + _ZN13BasicSpectrum5clearEv@Base 82 + _ZN13BasicSpectrum8getLowMZEv@Base 82 + _ZN13BasicSpectrum8getRTimeEb@Base 82 + _ZN13BasicSpectrum8setLowMZEd@Base 82 + _ZN13BasicSpectrum8setRTimeEf@Base 82 + _ZN13BasicSpectrum9getHighMZEv@Base 82 + _ZN13BasicSpectrum9setHighMZEd@Base 82 + _ZN13BasicSpectrumC1ERKS_@Base 82 + _ZN13BasicSpectrumC1Ev@Base 82 + _ZN13BasicSpectrumC2ERKS_@Base 82 + _ZN13BasicSpectrumC2Ev@Base 82 + _ZN13BasicSpectrumD1Ev@Base 82 + _ZN13BasicSpectrumD2Ev@Base 82 + _ZN13BasicSpectrumaSERKS_@Base 82 + _ZN13BasicSpectrumixEj@Base 82 + _ZN13mzpSAXHandler10charactersEPKci@Base 82 + _ZN13mzpSAXHandler10endElementEPKc@Base 82 + _ZN13mzpSAXHandler11parseOffsetEx@Base 82 + _ZN13mzpSAXHandler12startElementEPKcPS1_@Base 82 + _ZN13mzpSAXHandler16setGZCompressionEb@Base 82 + _ZN13mzpSAXHandler4openEPKc@Base 82 + _ZN13mzpSAXHandler5parseEv@Base 82 + _ZN13mzpSAXHandlerC1Ev@Base 82 + _ZN13mzpSAXHandlerC2Ev@Base 82 + _ZN13mzpSAXHandlerD0Ev@Base 82 + _ZN13mzpSAXHandlerD1Ev@Base 82 + _ZN13mzpSAXHandlerD2Ev@Base 82 + _ZN13sPrecursorIonD1Ev@Base 82 + _ZN13sPrecursorIonD2Ev@Base 82 + _ZN14instrumentInfoC1ERKS_@Base 82 + _ZN14instrumentInfoC2ERKS_@Base 82 + _ZN14instrumentInfoD1Ev@Base 82 + _ZN14instrumentInfoD2Ev@Base 82 + _ZN16ChromatogramList12chromatogramEib@Base 82 + _ZN16ChromatogramList3getEv@Base 82 + _ZN16ChromatogramList4sizeEv@Base 82 + _ZN16ChromatogramListC1EP17mzpSAXMzmlHandlerPvP17BasicChromatogram@Base 82 + _ZN16ChromatogramListC1Ev@Base 82 + _ZN16ChromatogramListC2EP17mzpSAXMzmlHandlerPvP17BasicChromatogram@Base 82 + _ZN16ChromatogramListC2Ev@Base 82 + _ZN16ChromatogramListD1Ev@Base 82 + _ZN16ChromatogramListD2Ev@Base 82 + _ZN17BasicChromatogram10setProductEddd@Base 82 + _ZN17BasicChromatogram11getIDStringEPc@Base 82 + _ZN17BasicChromatogram11setIDStringEPc@Base 82 + _ZN17BasicChromatogram12setPrecursorEdidd@Base 82 + 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_ZNSt6vectorIdSaIdEE17_M_default_appendEj@Base 82 + _ZNSt6vectorIdSaIdEE17_M_realloc_insertIJRKdEEEvN9__gnu_cxx17__normal_iteratorIPdS1_EEDpOT_@Base 82 + _ZNSt6vectorIdSaIdEE17_M_realloc_insertIJdEEEvN9__gnu_cxx17__normal_iteratorIPdS1_EEDpOT_@Base 82 + _ZNSt6vectorIfSaIfEE17_M_realloc_insertIJRKfEEEvN9__gnu_cxx17__normal_iteratorIPfS1_EEDpOT_@Base 82 + _ZNSt6vectorIfSaIfEE17_M_realloc_insertIJfEEEvN9__gnu_cxx17__normal_iteratorIPfS1_EEDpOT_@Base 82 + _ZNSt6vectorIhSaIhEE17_M_default_appendEj@Base 82 + _ZNSt6vectorIiSaIiEE17_M_realloc_insertIJRKiEEEvN9__gnu_cxx17__normal_iteratorIPiS1_EEDpOT_@Base 82 + _ZNSt6vectorIiSaIiEE17_M_realloc_insertIJiEEEvN9__gnu_cxx17__normal_iteratorIPiS1_EEDpOT_@Base 82 + _ZTI13mzpSAXHandler@Base 82 + _ZTI17mzpSAXMzmlHandler@Base 82 + _ZTI18mzpSAXMzxmlHandler@Base 82 + _ZTS13mzpSAXHandler@Base 82 + _ZTS17mzpSAXMzmlHandler@Base 82 + _ZTS18mzpSAXMzxmlHandler@Base 82 + _ZTV13mzpSAXHandler@Base 82 + _ZTV17mzpSAXMzmlHandler@Base 82 + _ZTV18mzpSAXMzxmlHandler@Base 82 dh_makeshlibs -a rm -f debian/libmstoolkit-dev/DEBIAN/shlibs rm -f debian/libmstoolkit82/DEBIAN/shlibs echo "libmstoolkit 82 libmstoolkit82 (>= 82)" >> debian/libmstoolkit82/DEBIAN/shlibs echo "libmstoolkitlite 82 libmstoolkit82 (>= 82)" >> debian/libmstoolkit82/DEBIAN/shlibs chmod 0644 -- debian/libmstoolkit82/DEBIAN/shlibs chown 0:0 -- debian/libmstoolkit82/DEBIAN/shlibs mv debian/.debhelper/generated/libmstoolkit82/triggers.new debian/.debhelper/generated/libmstoolkit82/triggers rm -f debian/libmstoolkit-tools/DEBIAN/shlibs make[1]: Leaving directory '/build/libmstoolkit-82' dh_shlibdeps dpkg-shlibdeps -Tdebian/libmstoolkit82.substvars debian/libmstoolkit82/usr/lib/libmstoolkitlite.so.82.0.0 debian/libmstoolkit82/usr/lib/libmstoolkit.so.82.0.0 install -d debian/libmstoolkit-tools/DEBIAN dpkg-shlibdeps -Tdebian/libmstoolkit-tools.substvars debian/libmstoolkit-tools/usr/bin/msSingleScan dpkg-shlibdeps: warning: debian/libmstoolkit-tools/usr/bin/msSingleScan contains an unresolvable reference to symbol __aeabi_atexit@CXXABI_ARM_1.3.3: it's probably a plugin dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/libmstoolkit82/usr/lib/libmstoolkitlite.so.82.0.0 found in none of the libraries dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/libmstoolkit82/usr/lib/libmstoolkit.so.82.0.0 found in none of the libraries dh_installdeb install -d debian/libmstoolkit-dev/DEBIAN install -p -m0644 debian/.debhelper/generated/libmstoolkit82/triggers debian/libmstoolkit82/DEBIAN/triggers dh_gencontrol echo misc:Depends= >> debian/libmstoolkit-dev.substvars echo misc:Pre-Depends= >> debian/libmstoolkit-dev.substvars dpkg-gencontrol -plibmstoolkit-dev -ldebian/changelog -Tdebian/libmstoolkit-dev.substvars -Pdebian/libmstoolkit-dev echo misc:Depends= >> debian/libmstoolkit82.substvars echo misc:Pre-Depends= >> debian/libmstoolkit82.substvars install -d debian/.debhelper/libmstoolkit82/dbgsym-root/DEBIAN dpkg-gencontrol -plibmstoolkit82 -ldebian/changelog -Tdebian/libmstoolkit82.substvars -Pdebian/.debhelper/libmstoolkit82/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -UBuilt-Using -DAuto-Built-Package=debug-symbols -UProtected -DPackage=libmstoolkit82-dbgsym "-DDepends=libmstoolkit82 (= \${binary:Version})" "-DDescription=debug symbols for libmstoolkit82" "-DBuild-Ids=9587ef4f6b3aa0c2c3bcfaf7f591ed0a5663e982 9bcfe59f408ba001e94b477971fbc5f268bb8ad7" -DSection=debug -UMulti-Arch -UReplaces -UBreaks echo misc:Depends= >> debian/libmstoolkit-tools.substvars echo misc:Pre-Depends= >> debian/libmstoolkit-tools.substvars install -d debian/.debhelper/libmstoolkit-tools/dbgsym-root/DEBIAN dpkg-gencontrol -plibmstoolkit-tools -ldebian/changelog -Tdebian/libmstoolkit-tools.substvars -Pdebian/.debhelper/libmstoolkit-tools/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -UBuilt-Using -DAuto-Built-Package=debug-symbols -UProtected -DPackage=libmstoolkit-tools-dbgsym "-DDepends=libmstoolkit-tools (= \${binary:Version})" "-DDescription=debug symbols for libmstoolkit-tools" -DBuild-Ids=23dc5247a2ea64b06912af0abcd24909997942e1 -DSection=debug -UMulti-Arch -UReplaces -UBreaks chmod 0644 -- debian/libmstoolkit-dev/DEBIAN/control chown 0:0 -- debian/libmstoolkit-dev/DEBIAN/control chmod 0644 -- debian/.debhelper/libmstoolkit-tools/dbgsym-root/DEBIAN/control chown 0:0 -- debian/.debhelper/libmstoolkit-tools/dbgsym-root/DEBIAN/control dpkg-gencontrol -plibmstoolkit-tools -ldebian/changelog -Tdebian/libmstoolkit-tools.substvars -Pdebian/libmstoolkit-tools chmod 0644 -- debian/.debhelper/libmstoolkit82/dbgsym-root/DEBIAN/control chown 0:0 -- debian/.debhelper/libmstoolkit82/dbgsym-root/DEBIAN/control dpkg-gencontrol -plibmstoolkit82 -ldebian/changelog -Tdebian/libmstoolkit82.substvars -Pdebian/libmstoolkit82 chmod 0644 -- debian/libmstoolkit-tools/DEBIAN/control chown 0:0 -- debian/libmstoolkit-tools/DEBIAN/control chmod 0644 -- debian/libmstoolkit82/DEBIAN/control chown 0:0 -- debian/libmstoolkit82/DEBIAN/control dh_md5sums cd debian/libmstoolkit-dev >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums cd debian/libmstoolkit-tools >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums cd debian/libmstoolkit82 >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/libmstoolkit-tools/DEBIAN/md5sums chown 0:0 -- debian/libmstoolkit-tools/DEBIAN/md5sums chmod 0644 -- debian/libmstoolkit-dev/DEBIAN/md5sums chown 0:0 -- debian/libmstoolkit-dev/DEBIAN/md5sums chmod 0644 -- debian/libmstoolkit82/DEBIAN/md5sums chown 0:0 -- debian/libmstoolkit82/DEBIAN/md5sums cd debian/.debhelper/libmstoolkit-tools/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums cd debian/.debhelper/libmstoolkit82/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/.debhelper/libmstoolkit-tools/dbgsym-root/DEBIAN/md5sums chown 0:0 -- debian/.debhelper/libmstoolkit-tools/dbgsym-root/DEBIAN/md5sums chmod 0644 -- debian/.debhelper/libmstoolkit82/dbgsym-root/DEBIAN/md5sums chown 0:0 -- debian/.debhelper/libmstoolkit82/dbgsym-root/DEBIAN/md5sums dh_builddeb dpkg-deb --build debian/libmstoolkit-dev .. dpkg-deb --build debian/.debhelper/libmstoolkit82/dbgsym-root .. dpkg-deb --build debian/.debhelper/libmstoolkit-tools/dbgsym-root .. dpkg-deb: building package 'libmstoolkit-dev' in '../libmstoolkit-dev_82-7_armhf.deb'. dpkg-deb: building package 'libmstoolkit82-dbgsym' in '../libmstoolkit82-dbgsym_82-7_armhf.deb'. dpkg-deb: building package 'libmstoolkit-tools-dbgsym' in '../libmstoolkit-tools-dbgsym_82-7_armhf.deb'. dpkg-deb --build debian/libmstoolkit82 .. dpkg-deb: building package 'libmstoolkit82' in '../libmstoolkit82_82-7_armhf.deb'. dpkg-deb --build debian/libmstoolkit-tools .. dpkg-deb: building package 'libmstoolkit-tools' in '../libmstoolkit-tools_82-7_armhf.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../libmstoolkit_82-7_armhf.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/16163 and its subdirectories I: Current time: Wed Jul 14 01:18:23 -12 2021 I: pbuilder-time-stamp: 1626268703 Wed Jul 14 13:18:42 UTC 2021 I: 1st build successful. Starting 2nd build on remote node cbxi4b-armhf-rb.debian.net. Wed Jul 14 13:18:42 UTC 2021 I: Preparing to do remote build '2' on cbxi4b-armhf-rb.debian.net. Wed Jul 14 13:38:52 UTC 2021 I: Deleting $TMPDIR on cbxi4b-armhf-rb.debian.net. Wed Jul 14 13:38:54 UTC 2021 I: libmstoolkit_82-7_armhf.changes: Format: 1.8 Date: Tue, 16 Jun 2020 13:25:37 +0200 Source: libmstoolkit Binary: libmstoolkit-dev libmstoolkit-tools libmstoolkit-tools-dbgsym libmstoolkit82 libmstoolkit82-dbgsym Architecture: armhf Version: 82-7 Distribution: unstable Urgency: low Maintainer: The Debichem Group Changed-By: Filippo Rusconi Description: libmstoolkit-dev - libraries for manipulating mass spectrometry data - dev files libmstoolkit-tools - libraries for manipulating mass spectrometry data - tools libmstoolkit82 - libraries for manipulating mass spectrometry data - runtime Changes: libmstoolkit (82-7) unstable; urgency=low . * Fix the VCS urls to point to the salsa git repos. . * Standards-Version: 4.5.0. * Build-Depends: debhelper-compat (= 12), Checksums-Sha1: 5a519046e43601e0c4f1bd2318b3ba82319930f5 127888 libmstoolkit-dev_82-7_armhf.deb 854da3a5e44fb248beea7d2f9fecabf799efd2fe 3548 libmstoolkit-tools-dbgsym_82-7_armhf.deb 12f1d88b44fa55d625215b0e009e0586c3478de5 11080 libmstoolkit-tools_82-7_armhf.deb 9a3cb5b04f543a2d65dd3dbf9ba9a2bfe6bae666 1769732 libmstoolkit82-dbgsym_82-7_armhf.deb e0845b47e62414e10796120d33170fba14da9b14 114344 libmstoolkit82_82-7_armhf.deb d85ba58282829d1234b8cad6334ff2c9cf89581f 5973 libmstoolkit_82-7_armhf.buildinfo Checksums-Sha256: a1d91598d7f5133ce543ef29082ca82dfc8728b9dcaeddabd8a2ba7eee5725bf 127888 libmstoolkit-dev_82-7_armhf.deb a4e9da4b2d0a723e10ced152e590ca45039cad05baff24dec877b82e28261221 3548 libmstoolkit-tools-dbgsym_82-7_armhf.deb 8b8822bd98352c67f1dfebfcc3d0d3a1143b4aa41cb5c1ad87ad15698126d63b 11080 libmstoolkit-tools_82-7_armhf.deb df18e89080550bff2d143d6e801a6a17196fe877a2758cbfbeded0b29ee4a94d 1769732 libmstoolkit82-dbgsym_82-7_armhf.deb d7dd1c96675f08f5c62e4375a04a7472f7243953e7fd4ed8918b74484a309333 114344 libmstoolkit82_82-7_armhf.deb 7445e069c7d94c796a0f35e5554703cbdacad227c9032f2551aee9b07feb6c57 5973 libmstoolkit_82-7_armhf.buildinfo Files: 6df20afa5e5d02ea5fb8dd7aefb5428e 127888 libdevel optional libmstoolkit-dev_82-7_armhf.deb b46abf63cd33e93abffcd27dd2b97720 3548 debug optional libmstoolkit-tools-dbgsym_82-7_armhf.deb 11aa17a81a2ab417e8c11d7784c6dec2 11080 science optional libmstoolkit-tools_82-7_armhf.deb 79980d6c3a71666a333d10fb4ad32db4 1769732 debug optional libmstoolkit82-dbgsym_82-7_armhf.deb d0500c5f599af05ce80d70cb5eb403d0 114344 libs optional libmstoolkit82_82-7_armhf.deb dbb76e81e173a2e101032102d3367408 5973 libs optional libmstoolkit_82-7_armhf.buildinfo Wed Jul 14 13:38:55 UTC 2021 I: diffoscope 177 will be used to compare the two builds: # Profiling output for: /usr/bin/diffoscope --html /srv/reproducible-results/rbuild-debian/tmp.RtPaqagNRR/libmstoolkit_82-7.diffoscope.html --text /srv/reproducible-results/rbuild-debian/tmp.RtPaqagNRR/libmstoolkit_82-7.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/tmp.RtPaqagNRR/libmstoolkit_82-7.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/tmp.RtPaqagNRR/b1/libmstoolkit_82-7_armhf.changes /srv/reproducible-results/rbuild-debian/tmp.RtPaqagNRR/b2/libmstoolkit_82-7_armhf.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.253s) 0.253s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.037s) 0.037s 10 calls diffoscope.comparators.binary.FilesystemFile 0.000s 8 calls abc.DotChangesFile Wed Jul 14 13:38:58 UTC 2021 I: diffoscope 177 found no differences in the changes files, and a .buildinfo file also exists. Wed Jul 14 13:38:58 UTC 2021 I: libmstoolkit from bullseye built successfully and reproducibly on armhf. Wed Jul 14 13:38:59 UTC 2021 I: Submitting .buildinfo files to external archives: Wed Jul 14 13:38:59 UTC 2021 I: Submitting 8.0K b1/libmstoolkit_82-7_armhf.buildinfo.asc Wed Jul 14 13:39:01 UTC 2021 I: Submitting 8.0K b2/libmstoolkit_82-7_armhf.buildinfo.asc Wed Jul 14 13:39:02 UTC 2021 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Wed Jul 14 13:39:02 UTC 2021 I: Done submitting .buildinfo files. Wed Jul 14 13:39:02 UTC 2021 I: Removing signed libmstoolkit_82-7_armhf.buildinfo.asc files: removed './b1/libmstoolkit_82-7_armhf.buildinfo.asc' removed './b2/libmstoolkit_82-7_armhf.buildinfo.asc'