Thu Jul 29 21:06:28 UTC 2021 I: starting to build libchado-perl/bullseye/armhf on jenkins on '2021-07-29 21:06' Thu Jul 29 21:06:28 UTC 2021 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/armhf_39/1830/console.log Thu Jul 29 21:06:28 UTC 2021 I: Downloading source for bullseye/libchado-perl=1.31-6 --2021-07-29 21:06:28-- http://cdn-fastly.deb.debian.org/debian/pool/main/libc/libchado-perl/libchado-perl_1.31-6.dsc Connecting to 78.137.99.97:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2547 (2.5K) Saving to: ‘libchado-perl_1.31-6.dsc’ 0K .. 100% 179M=0s 2021-07-29 21:06:28 (179 MB/s) - ‘libchado-perl_1.31-6.dsc’ saved [2547/2547] Thu Jul 29 21:06:28 UTC 2021 I: libchado-perl_1.31-6.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: libchado-perl Binary: libchado-perl, chado-utils Architecture: all Version: 1.31-6 Maintainer: Debian Med Packaging Team Uploaders: Scott Cain , Steffen Moeller , Olivier Sallou , Andreas Tille Homepage: http://gmod.org/wiki/Chado Standards-Version: 4.2.1 Vcs-Browser: https://salsa.debian.org/med-team/libchado-perl Vcs-Git: https://salsa.debian.org/med-team/libchado-perl.git Build-Depends: debhelper (>= 11~) Build-Depends-Indep: perl, libclass-dbi-pg-perl, libxml-libxslt-perl, liblog-log4perl-perl, bioperl, libgo-perl, libdbd-pg-perl, libdbi-perl, libgd-gd2-perl, libdigest-md5-file-perl, libgraph-perl, libdata-stag-perl, libxml-perl, libclass-dbi-perl, libclass-dbi-pager-perl, libxml-simple-perl, libwww-perl, libtemplate-perl, libcgi-session-perl, libsql-translator-perl, libdbix-dbstag-perl, libmodule-build-perl Package-List: chado-utils deb perl optional arch=all libchado-perl deb perl optional arch=all Checksums-Sha1: 47de881786d4f1a86264ca9ce9ad5d05650d7aa9 5051094 libchado-perl_1.31.orig.tar.gz 1949c8bda2501dce59c88e4c0710f8330cc959e3 14660 libchado-perl_1.31-6.debian.tar.xz Checksums-Sha256: 75eb45e681f4cdb41884cccbf62828604e4e206b821f90c7ed155d809bb4ad7a 5051094 libchado-perl_1.31.orig.tar.gz 431d96ee6b4f52368bae2b546fed5a8cd83f18790e7903adee58ff8d4b751f5e 14660 libchado-perl_1.31-6.debian.tar.xz Files: a4748b03324185eea185b2391b94e36a 5051094 libchado-perl_1.31.orig.tar.gz 06a3d24d0db664f6624d702fefc773c2 14660 libchado-perl_1.31-6.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJHBAEBCAAxFiEEX7Rvg9O5UgRjNdJteNxo2zJthDgFAl3ow0YTHG9zYWxsb3VA ZGViaWFuLm9yZwAKCRB43GjbMm2EOGXxD/49UhO7Xf4WObLTptDQnIW1aGvkXMVF IYtSmXTsxVj9PNJB8SPawbwtjf60crdyEuHXYhsNOlkEDCQ1g9gwQ0OVRZynw7w/ 2nX2zvy/bCqGoIfMuCj06sQ3gj3N87cwdnWsz1SkkNxGjYVSNHMREirVbmCXW2qu F1U3h2fLbsdm7dpcRkMPehcy+1pdgZlRtCUrIiJfPGtF7yw6wTRd6OIxJwT4QHRh e9kpvpvoiJmWaTJtXeuWN3Qm0odRET3467wz1Nmf5tFCTavf1obhJEdrfz7z8NeZ S7X2CjtPRFr6UoDBAiiFOaM6ESEb3eNVaV5AvSpvw+cMVhybPsOJRFuhsrvJpiGg A13riPhBM0+DrJYkwZWiS94jjg3GLK9bgoEKRl6xu7D+Se1Fw5QBWurKyYpmwWNL /fVU2Qsh2pF7qwn5O0V4oM/ghu39nuc03z+tIvC6HTadVs2RTp0DoDIUxSM8pr/l JsJ9UcYtLyeypxhakFPjk+YOyk8OlY2R1Adl3QytkGDS6D09U9aT2C0p+hsveHx6 H9R11bbqb81uIL0XP+TX53nbrm3ryN9bmm0yR1fUaWBWNwnCo5+g1sksmbviYT99 f8TnhKMUD6rEx8Y9/3Cxzbc3MjuozUteYDS28S744HS0chhdJhmwILlB3zMgJjjE hOBn6JSFxXCVEg== =GLan -----END PGP SIGNATURE----- Thu Jul 29 21:06:28 UTC 2021 I: Checking whether the package is not for us Thu Jul 29 21:06:28 UTC 2021 I: Starting 1st build on remote node virt64c-armhf-rb.debian.net. Thu Jul 29 21:06:28 UTC 2021 I: Preparing to do remote build '1' on virt64c-armhf-rb.debian.net. Thu Jul 29 21:10:07 UTC 2021 I: Deleting $TMPDIR on virt64c-armhf-rb.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Thu Jul 29 09:06:35 -12 2021 I: pbuilder-time-stamp: 1627592795 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bullseye-reproducible-base.tgz] I: copying local configuration I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [libchado-perl_1.31-6.dsc] I: copying [./libchado-perl_1.31.orig.tar.gz] I: copying [./libchado-perl_1.31-6.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/tmp/dpkg-verify-sig.RExqvt8j/trustedkeys.kbx': General error gpgv: Signature made Wed Dec 4 20:43:50 2019 -12 gpgv: using RSA key 5FB46F83D3B952046335D26D78DC68DB326D8438 gpgv: issuer "osallou@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./libchado-perl_1.31-6.dsc dpkg-source: info: extracting libchado-perl in libchado-perl-1.31 dpkg-source: info: unpacking libchado-perl_1.31.orig.tar.gz dpkg-source: info: unpacking libchado-perl_1.31-6.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying fix_perl_headers dpkg-source: info: applying force_SIMPLE dpkg-source: info: applying fix_spelling_manpage dpkg-source: info: applying fix_manpages dpkg-source: info: applying setBinPathForBuilder dpkg-source: info: applying remove_pl_extension.patch dpkg-source: info: applying 0001-Sort-generated-build.conf-for-reproducibility.patch dpkg-source: info: applying 0001-Sort-installed-configuration-file-for-reproducibilit.patch I: using fakeroot in build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/27395/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='armhf' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=3' DISTRIBUTION='' HOME='/root' HOST_ARCH='armhf' IFS=' ' INVOCATION_ID='f9692ff30d4b41848f71086293328060' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='27395' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.CFRwEusaG2/pbuilderrc_O01R --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.CFRwEusaG2/b1 --logfile b1/build.log libchado-perl_1.31-6.dsc' SUDO_GID='113' SUDO_UID='107' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://10.0.0.15:8000/' I: uname -a Linux virt64c 5.10.0-8-arm64 #1 SMP Debian 5.10.46-2 (2021-07-20) aarch64 GNU/Linux I: ls -l /bin total 3580 -rwxr-xr-x 1 root root 816764 Jun 21 14:26 bash -rwxr-xr-x 3 root root 26052 Jul 20 2020 bunzip2 -rwxr-xr-x 3 root root 26052 Jul 20 2020 bzcat lrwxrwxrwx 1 root root 6 Jul 20 2020 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2225 Jul 20 2020 bzdiff lrwxrwxrwx 1 root root 6 Jul 20 2020 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4877 Sep 4 2019 bzexe lrwxrwxrwx 1 root root 6 Jul 20 2020 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3775 Jul 20 2020 bzgrep -rwxr-xr-x 3 root root 26052 Jul 20 2020 bzip2 -rwxr-xr-x 1 root root 9636 Jul 20 2020 bzip2recover lrwxrwxrwx 1 root root 6 Jul 20 2020 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Jul 20 2020 bzmore -rwxr-xr-x 1 root root 26668 Sep 22 2020 cat -rwxr-xr-x 1 root root 43104 Sep 22 2020 chgrp -rwxr-xr-x 1 root root 38984 Sep 22 2020 chmod -rwxr-xr-x 1 root root 43112 Sep 22 2020 chown -rwxr-xr-x 1 root root 92616 Sep 22 2020 cp -rwxr-xr-x 1 root root 75524 Dec 10 2020 dash -rwxr-xr-x 1 root root 75880 Sep 22 2020 date -rwxr-xr-x 1 root root 55436 Sep 22 2020 dd -rwxr-xr-x 1 root root 59912 Sep 22 2020 df -rwxr-xr-x 1 root root 96764 Sep 22 2020 dir -rwxr-xr-x 1 root root 55012 Feb 7 02:38 dmesg lrwxrwxrwx 1 root root 8 Nov 6 2019 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Nov 6 2019 domainname -> hostname -rwxr-xr-x 1 root root 22508 Sep 22 2020 echo -rwxr-xr-x 1 root root 28 Nov 9 2020 egrep -rwxr-xr-x 1 root root 22496 Sep 22 2020 false -rwxr-xr-x 1 root root 28 Nov 9 2020 fgrep -rwxr-xr-x 1 root root 47492 Feb 7 02:38 findmnt -rwsr-xr-x 1 root root 26076 Feb 26 04:12 fusermount -rwxr-xr-x 1 root root 124508 Nov 9 2020 grep -rwxr-xr-x 2 root root 2346 Mar 2 11:30 gunzip -rwxr-xr-x 1 root root 6376 Mar 2 11:30 gzexe -rwxr-xr-x 1 root root 64212 Mar 2 11:30 gzip -rwxr-xr-x 1 root root 13784 Nov 6 2019 hostname -rwxr-xr-x 1 root root 43180 Sep 22 2020 ln -rwxr-xr-x 1 root root 35068 Feb 7 2020 login -rwxr-xr-x 1 root root 96764 Sep 22 2020 ls -rwxr-xr-x 1 root root 99940 Feb 7 02:38 lsblk -rwxr-xr-x 1 root root 51408 Sep 22 2020 mkdir -rwxr-xr-x 1 root root 43184 Sep 22 2020 mknod -rwxr-xr-x 1 root root 30780 Sep 22 2020 mktemp -rwxr-xr-x 1 root root 34408 Feb 7 02:38 more -rwsr-xr-x 1 root root 34400 Feb 7 02:38 mount -rwxr-xr-x 1 root root 9824 Feb 7 02:38 mountpoint -rwxr-xr-x 1 root root 88524 Sep 22 2020 mv lrwxrwxrwx 1 root root 8 Nov 6 2019 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Apr 18 03:38 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 26652 Sep 22 2020 pwd lrwxrwxrwx 1 root root 4 Jun 21 14:26 rbash -> bash -rwxr-xr-x 1 root root 30740 Sep 22 2020 readlink -rwxr-xr-x 1 root root 43104 Sep 22 2020 rm -rwxr-xr-x 1 root root 30732 Sep 22 2020 rmdir -rwxr-xr-x 1 root root 14144 Sep 27 2020 run-parts -rwxr-xr-x 1 root root 76012 Dec 22 2018 sed lrwxrwxrwx 1 root root 4 Jul 25 21:26 sh -> dash -rwxr-xr-x 1 root root 22532 Sep 22 2020 sleep -rwxr-xr-x 1 root root 55360 Sep 22 2020 stty -rwsr-xr-x 1 root root 46704 Feb 7 02:38 su -rwxr-xr-x 1 root root 22532 Sep 22 2020 sync -rwxr-xr-x 1 root root 340872 Feb 16 21:55 tar -rwxr-xr-x 1 root root 9808 Sep 27 2020 tempfile -rwxr-xr-x 1 root root 67696 Sep 22 2020 touch -rwxr-xr-x 1 root root 22496 Sep 22 2020 true -rwxr-xr-x 1 root root 9636 Feb 26 04:12 ulockmgr_server -rwsr-xr-x 1 root root 22108 Feb 7 02:38 umount -rwxr-xr-x 1 root root 22520 Sep 22 2020 uname -rwxr-xr-x 2 root root 2346 Mar 2 11:30 uncompress -rwxr-xr-x 1 root root 96764 Sep 22 2020 vdir -rwxr-xr-x 1 root root 38512 Feb 7 02:38 wdctl lrwxrwxrwx 1 root root 8 Nov 6 2019 ypdomainname -> hostname -rwxr-xr-x 1 root root 1984 Mar 2 11:30 zcat -rwxr-xr-x 1 root root 1678 Mar 2 11:30 zcmp -rwxr-xr-x 1 root root 5880 Mar 2 11:30 zdiff -rwxr-xr-x 1 root root 29 Mar 2 11:30 zegrep -rwxr-xr-x 1 root root 29 Mar 2 11:30 zfgrep -rwxr-xr-x 1 root root 2081 Mar 2 11:30 zforce -rwxr-xr-x 1 root root 7585 Mar 2 11:30 zgrep -rwxr-xr-x 1 root root 2206 Mar 2 11:30 zless -rwxr-xr-x 1 root root 1842 Mar 2 11:30 zmore -rwxr-xr-x 1 root root 4553 Mar 2 11:30 znew I: user script /srv/workspace/pbuilder/27395/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: armhf Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper (>= 11~), perl, libclass-dbi-pg-perl, libxml-libxslt-perl, liblog-log4perl-perl, bioperl, libgo-perl, libdbd-pg-perl, libdbi-perl, libgd-gd2-perl, libdigest-md5-file-perl, libgraph-perl, libdata-stag-perl, libxml-perl, libclass-dbi-perl, libclass-dbi-pager-perl, libxml-simple-perl, libwww-perl, libtemplate-perl, libcgi-session-perl, libsql-translator-perl, libdbix-dbstag-perl, libmodule-build-perl dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19398 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper (>= 11~); however: Package debhelper is not installed. pbuilder-satisfydepends-dummy depends on libclass-dbi-pg-perl; however: Package libclass-dbi-pg-perl is not installed. pbuilder-satisfydepends-dummy depends on libxml-libxslt-perl; however: Package libxml-libxslt-perl is not installed. pbuilder-satisfydepends-dummy depends on liblog-log4perl-perl; however: Package liblog-log4perl-perl is not installed. pbuilder-satisfydepends-dummy depends on bioperl; however: Package bioperl is not installed. pbuilder-satisfydepends-dummy depends on libgo-perl; however: Package libgo-perl is not installed. pbuilder-satisfydepends-dummy depends on libdbd-pg-perl; however: Package libdbd-pg-perl is not installed. pbuilder-satisfydepends-dummy depends on libdbi-perl; however: Package libdbi-perl is not installed. pbuilder-satisfydepends-dummy depends on libgd-gd2-perl; however: Package libgd-gd2-perl is not installed. pbuilder-satisfydepends-dummy depends on libdigest-md5-file-perl; however: Package libdigest-md5-file-perl is not installed. pbuilder-satisfydepends-dummy depends on libgraph-perl; however: Package libgraph-perl is not installed. pbuilder-satisfydepends-dummy depends on libdata-stag-perl; however: Package libdata-stag-perl is not installed. pbuilder-satisfydepends-dummy depends on libxml-perl; however: Package libxml-perl is not installed. pbuilder-satisfydepends-dummy depends on libclass-dbi-perl; however: Package libclass-dbi-perl is not installed. pbuilder-satisfydepends-dummy depends on libclass-dbi-pager-perl; however: Package libclass-dbi-pager-perl is not installed. pbuilder-satisfydepends-dummy depends on libxml-simple-perl; however: Package libxml-simple-perl is not installed. pbuilder-satisfydepends-dummy depends on libwww-perl; however: Package libwww-perl is not installed. pbuilder-satisfydepends-dummy depends on libtemplate-perl; however: Package libtemplate-perl is not installed. pbuilder-satisfydepends-dummy depends on libcgi-session-perl; however: Package libcgi-session-perl is not installed. pbuilder-satisfydepends-dummy depends on libsql-translator-perl; however: Package libsql-translator-perl is not installed. pbuilder-satisfydepends-dummy depends on libdbix-dbstag-perl; however: Package libdbix-dbstag-perl is not installed. pbuilder-satisfydepends-dummy depends on libmodule-build-perl; however: Package libmodule-build-perl is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bioperl{a} bsdextrautils{a} ca-certificates{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} fontconfig{a} fontconfig-config{a} fonts-dejavu-core{a} gettext{a} gettext-base{a} graphviz{a} groff-base{a} intltool-debian{a} libalgorithm-diff-perl{a} libappconfig-perl{a} libarchive-zip-perl{a} libb-hooks-op-check-perl{a} libbio-perl-perl{a} libbrotli1{a} libbsd0{a} libcairo2{a} libcapture-tiny-perl{a} libcarp-clan-perl{a} libcdt5{a} libcgi-pm-perl{a} libcgi-session-perl{a} libcgraph6{a} libclass-accessor-chained-perl{a} libclass-accessor-perl{a} libclass-data-inheritable-perl{a} libclass-dbi-pager-perl{a} libclass-dbi-perl{a} libclass-dbi-pg-perl{a} libclass-inspector-perl{a} libclass-makemethods-perl{a} libclass-method-modifiers-perl{a} libclass-trigger-perl{a} libclone-perl{a} libdata-page-perl{a} libdata-stag-perl{a} libdatrie1{a} libdbd-pg-perl{a} libdbi-perl{a} libdbix-contextualfetch-perl{a} libdbix-dbschema-perl{a} libdbix-dbstag-perl{a} libdebhelper-perl{a} libdeflate0{a} libdevel-callchecker-perl{a} libdevel-stacktrace-perl{a} libdigest-md5-file-perl{a} libdynaloader-functions-perl{a} libelf1{a} libencode-locale-perl{a} libexception-class-perl{a} libexpat1{a} libexporter-lite-perl{a} libfile-listing-perl{a} libfile-sharedir-perl{a} libfile-stripnondeterminism-perl{a} libfontconfig1{a} libfreetype6{a} libfreezethaw-perl{a} libfribidi0{a} libgd-perl{a} libgd3{a} libglib2.0-0{a} libgo-perl{a} libgraph-perl{a} libgraphite2-3{a} libgraphviz-perl{a} libgts-0.7-5{a} libgvc6{a} libgvpr2{a} libharfbuzz0b{a} libheap-perl{a} libhtml-parser-perl{a} libhtml-tagset-perl{a} libhtml-tree-perl{a} libhttp-cookies-perl{a} libhttp-date-perl{a} libhttp-message-perl{a} libhttp-negotiate-perl{a} libice6{a} libicu67{a} libima-dbi-perl{a} libimport-into-perl{a} libio-html-perl{a} libio-pty-perl{a} libio-socket-ssl-perl{a} libio-string-perl{a} libio-stringy-perl{a} libipc-run-perl{a} libjbig0{a} libjpeg62-turbo{a} liblab-gamut1{a} libldap-2.4-2{a} liblog-log4perl-perl{a} libltdl7{a} liblwp-mediatypes-perl{a} liblwp-protocol-https-perl{a} libmagic-mgc{a} libmagic1{a} libmd0{a} libmodule-build-perl{a} libmodule-runtime-perl{a} libmoo-perl{a} libnet-http-perl{a} libnet-ssleay-perl{a} libpackage-variant-perl{a} libpango-1.0-0{a} libpangocairo-1.0-0{a} libpangoft2-1.0-0{a} libparams-classify-perl{a} libparse-recdescent-perl{a} libpathplan4{a} libpipeline1{a} libpixman-1-0{a} libpng16-16{a} libpq5{a} librole-tiny-perl{a} libsasl2-2{a} libsasl2-modules-db{a} libset-object-perl{a} libsigsegv2{a} libsm6{a} libsql-translator-perl{a} libstrictures-perl{a} libsub-name-perl{a} libsub-override-perl{a} libsub-quote-perl{a} libsub-uplevel-perl{a} libtemplate-perl{a} libtest-deep-perl{a} libtest-differences-perl{a} libtest-exception-perl{a} libtest-most-perl{a} libtest-warn-perl{a} libtext-diff-perl{a} libthai-data{a} libthai0{a} libtiff5{a} libtimedate-perl{a} libtool{a} libtry-tiny-perl{a} libuchardet0{a} libuniversal-moniker-perl{a} liburi-perl{a} libwebp6{a} libwww-perl{a} libwww-robotrules-perl{a} libx11-6{a} libx11-data{a} libxau6{a} libxaw7{a} libxcb-render0{a} libxcb-shm0{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxml-libxml-perl{a} libxml-libxslt-perl{a} libxml-namespacesupport-perl{a} libxml-parser-perl{a} libxml-perl{a} libxml-sax-base-perl{a} libxml-sax-perl{a} libxml-simple-perl{a} libxml-twig-perl{a} libxml-xpath-perl{a} libxml2{a} libxmu6{a} libxpm4{a} libxrender1{a} libxslt1.1{a} libxt6{a} libyaml-perl{a} m4{a} man-db{a} netbase{a} openssl{a} perl-openssl-defaults{a} po-debconf{a} sensible-utils{a} ucf{a} x11-common{a} The following packages are RECOMMENDED but will NOT be installed: bioperl-run curl fonts-liberation libace-perl libalgorithm-diff-xs-perl libalgorithm-munkres-perl libapache-dbi-perl libarchive-cpio-perl libarray-compare-perl libbio-asn1-entrezgene-perl libbio-perl-run-perl libcache-cache-perl libcgi-fast-perl libclass-dbi-abstractsearch-perl libclass-xsaccessor-perl libconvert-binary-c-perl libdata-dump-perl libdbd-mysql-perl libdbd-sqlite3-perl libglib2.0-data libgts-bin libhtml-form-perl libhtml-format-perl libhtml-tableextract-perl libhttp-daemon-perl libipc-shareable-perl libjson-maybexs-perl libldap-common liblingua-en-inflect-perl liblist-moreutils-perl liblog-dispatch-perl libltdl-dev libmail-sendmail-perl libmailtools-perl libmldbm-perl libmodule-signature-perl libnamespace-clean-perl libpod-readme-perl libpostscript-perl libsasl2-modules libset-scalar-perl libsoap-lite-perl libsoftware-license-perl libsort-naturally-perl libspreadsheet-parseexcel-perl libspreadsheet-writeexcel-perl libsvg-graph-perl libsvg-perl libtext-iconv-perl libtext-recordparser-perl libtie-ixhash-perl libxml-checker-perl libxml-dom-xpath-perl libxml-sax-expat-perl libxml-sax-writer-perl libxml-writer-perl libyaml-libyaml-perl libyaml-syck-perl lynx perl-doc perl-tk shared-mime-info wget xdg-user-dirs xsltproc 0 packages upgraded, 193 newly installed, 0 to remove and 0 not upgraded. Need to get 43.7 MB of archives. After unpacking 130 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian bullseye/main armhf bsdextrautils armhf 2.36.1-7 [138 kB] Get: 2 http://deb.debian.org/debian bullseye/main armhf libuchardet0 armhf 0.0.7-1 [65.0 kB] Get: 3 http://deb.debian.org/debian bullseye/main armhf groff-base armhf 1.22.4-6 [847 kB] Get: 4 http://deb.debian.org/debian bullseye/main armhf libpipeline1 armhf 1.5.3-1 [30.1 kB] Get: 5 http://deb.debian.org/debian bullseye/main armhf man-db armhf 2.9.4-2 [1319 kB] Get: 6 http://deb.debian.org/debian bullseye/main armhf netbase all 6.3 [19.9 kB] Get: 7 http://deb.debian.org/debian bullseye/main armhf sensible-utils all 0.0.14 [14.8 kB] Get: 8 http://deb.debian.org/debian bullseye/main armhf openssl armhf 1.1.1k-1 [826 kB] Get: 9 http://deb.debian.org/debian bullseye/main armhf ca-certificates all 20210119 [158 kB] Get: 10 http://deb.debian.org/debian bullseye/main armhf libmagic-mgc armhf 1:5.39-3 [273 kB] Get: 11 http://deb.debian.org/debian bullseye/main armhf libmagic1 armhf 1:5.39-3 [117 kB] Get: 12 http://deb.debian.org/debian bullseye/main armhf file armhf 1:5.39-3 [68.1 kB] Get: 13 http://deb.debian.org/debian bullseye/main armhf gettext-base armhf 0.21-4 [171 kB] Get: 14 http://deb.debian.org/debian bullseye/main armhf ucf all 3.0043 [74.0 kB] Get: 15 http://deb.debian.org/debian bullseye/main armhf libsigsegv2 armhf 2.13-1 [34.0 kB] Get: 16 http://deb.debian.org/debian bullseye/main armhf m4 armhf 1.4.18-5 [192 kB] Get: 17 http://deb.debian.org/debian bullseye/main armhf autoconf all 2.69-14 [313 kB] Get: 18 http://deb.debian.org/debian bullseye/main armhf autotools-dev all 20180224.1+nmu1 [77.1 kB] Get: 19 http://deb.debian.org/debian bullseye/main armhf automake all 1:1.16.3-2 [814 kB] Get: 20 http://deb.debian.org/debian bullseye/main armhf autopoint all 0.21-4 [510 kB] Get: 21 http://deb.debian.org/debian bullseye/main armhf libio-string-perl all 1.08-3.1 [11.8 kB] Get: 22 http://deb.debian.org/debian bullseye/main armhf libdata-stag-perl all 0.14-2 [448 kB] Get: 23 http://deb.debian.org/debian bullseye/main armhf libbio-perl-perl all 1.7.7-2 [2607 kB] Get: 24 http://deb.debian.org/debian bullseye/main armhf libclass-data-inheritable-perl all 0.08-3 [8588 B] Get: 25 http://deb.debian.org/debian bullseye/main armhf libdevel-stacktrace-perl all 2.0400-1 [28.6 kB] Get: 26 http://deb.debian.org/debian bullseye/main armhf libexception-class-perl all 1.44-1 [32.3 kB] Get: 27 http://deb.debian.org/debian bullseye/main armhf libtest-deep-perl all 1.130-1 [49.3 kB] Get: 28 http://deb.debian.org/debian bullseye/main armhf libcapture-tiny-perl all 0.48-1 [26.0 kB] Get: 29 http://deb.debian.org/debian bullseye/main armhf libalgorithm-diff-perl all 1.201-1 [43.3 kB] Get: 30 http://deb.debian.org/debian bullseye/main armhf libtext-diff-perl all 1.45-1 [27.7 kB] Get: 31 http://deb.debian.org/debian bullseye/main armhf libtest-differences-perl all 0.67-1 [18.7 kB] Get: 32 http://deb.debian.org/debian bullseye/main armhf libsub-uplevel-perl all 0.2800-1.1 [16.5 kB] Get: 33 http://deb.debian.org/debian bullseye/main armhf libtest-exception-perl all 0.43-1 [18.7 kB] Get: 34 http://deb.debian.org/debian bullseye/main armhf libtest-warn-perl all 0.36-1 [16.2 kB] Get: 35 http://deb.debian.org/debian bullseye/main armhf libtest-most-perl all 0.37-1 [24.9 kB] Get: 36 http://deb.debian.org/debian bullseye/main armhf bioperl all 1.7.7-2 [246 kB] Get: 37 http://deb.debian.org/debian bullseye/main armhf libdebhelper-perl all 13.3.4 [189 kB] Get: 38 http://deb.debian.org/debian bullseye/main armhf libtool all 2.4.6-15 [513 kB] Get: 39 http://deb.debian.org/debian bullseye/main armhf dh-autoreconf all 20 [17.1 kB] Get: 40 http://deb.debian.org/debian bullseye/main armhf libarchive-zip-perl all 1.68-1 [104 kB] Get: 41 http://deb.debian.org/debian bullseye/main armhf libsub-override-perl all 0.09-2 [10.2 kB] Get: 42 http://deb.debian.org/debian bullseye/main armhf libfile-stripnondeterminism-perl all 1.12.0-1 [26.3 kB] Get: 43 http://deb.debian.org/debian bullseye/main armhf dh-strip-nondeterminism all 1.12.0-1 [15.4 kB] Get: 44 http://deb.debian.org/debian bullseye/main armhf libelf1 armhf 0.183-1 [161 kB] Get: 45 http://deb.debian.org/debian bullseye/main armhf dwz armhf 0.13+20210201-1 [179 kB] Get: 46 http://deb.debian.org/debian bullseye/main armhf libicu67 armhf 67.1-7 [8319 kB] Get: 47 http://deb.debian.org/debian bullseye/main armhf libxml2 armhf 2.9.10+dfsg-6.7 [602 kB] Get: 48 http://deb.debian.org/debian bullseye/main armhf gettext armhf 0.21-4 [1243 kB] Get: 49 http://deb.debian.org/debian bullseye/main armhf intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get: 50 http://deb.debian.org/debian bullseye/main armhf po-debconf all 1.0.21+nmu1 [248 kB] Get: 51 http://deb.debian.org/debian bullseye/main armhf debhelper all 13.3.4 [1049 kB] Get: 52 http://deb.debian.org/debian bullseye/main armhf libexpat1 armhf 2.2.10-2 [76.3 kB] Get: 53 http://deb.debian.org/debian bullseye/main armhf libbrotli1 armhf 1.0.9-2+b2 [262 kB] Get: 54 http://deb.debian.org/debian bullseye/main armhf libpng16-16 armhf 1.6.37-3 [277 kB] Get: 55 http://deb.debian.org/debian bullseye/main armhf libfreetype6 armhf 2.10.4+dfsg-1 [357 kB] Get: 56 http://deb.debian.org/debian bullseye/main armhf fonts-dejavu-core all 2.37-2 [1069 kB] Get: 57 http://deb.debian.org/debian bullseye/main armhf fontconfig-config all 2.13.1-4.2 [281 kB] Get: 58 http://deb.debian.org/debian bullseye/main armhf libfontconfig1 armhf 2.13.1-4.2 [329 kB] Get: 59 http://deb.debian.org/debian bullseye/main armhf fontconfig armhf 2.13.1-4.2 [415 kB] Get: 60 http://deb.debian.org/debian bullseye/main armhf libcdt5 armhf 2.42.2-5 [59.7 kB] Get: 61 http://deb.debian.org/debian bullseye/main armhf libcgraph6 armhf 2.42.2-5 [78.4 kB] Get: 62 http://deb.debian.org/debian bullseye/main armhf libjpeg62-turbo armhf 1:2.0.6-4 [123 kB] Get: 63 http://deb.debian.org/debian bullseye/main armhf libdeflate0 armhf 1.7-1 [43.1 kB] Get: 64 http://deb.debian.org/debian bullseye/main armhf libjbig0 armhf 2.1-3.1+b2 [28.4 kB] Get: 65 http://deb.debian.org/debian bullseye/main armhf libwebp6 armhf 0.6.1-2.1 [226 kB] Get: 66 http://deb.debian.org/debian bullseye/main armhf libtiff5 armhf 4.2.0-1 [271 kB] Get: 67 http://deb.debian.org/debian bullseye/main armhf libxau6 armhf 1:1.0.9-1 [19.0 kB] Get: 68 http://deb.debian.org/debian bullseye/main armhf libmd0 armhf 1.0.3-3 [27.4 kB] Get: 69 http://deb.debian.org/debian bullseye/main armhf libbsd0 armhf 0.11.3-1 [103 kB] Get: 70 http://deb.debian.org/debian bullseye/main armhf libxdmcp6 armhf 1:1.1.2-3 [24.9 kB] Get: 71 http://deb.debian.org/debian bullseye/main armhf libxcb1 armhf 1.14-3 [136 kB] Get: 72 http://deb.debian.org/debian bullseye/main armhf libx11-data all 2:1.7.1-1 [310 kB] Get: 73 http://deb.debian.org/debian bullseye/main armhf libx11-6 armhf 2:1.7.1-1 [712 kB] Get: 74 http://deb.debian.org/debian bullseye/main armhf libxpm4 armhf 1:3.5.12-1 [44.0 kB] Get: 75 http://deb.debian.org/debian bullseye/main armhf libgd3 armhf 2.3.0-2 [119 kB] Get: 76 http://deb.debian.org/debian bullseye/main armhf libglib2.0-0 armhf 2.66.8-1 [1206 kB] Get: 77 http://deb.debian.org/debian bullseye/main armhf libgts-0.7-5 armhf 0.7.6+darcs121130-4+b1 [138 kB] Get: 78 http://deb.debian.org/debian bullseye/main armhf libpixman-1-0 armhf 0.40.0-1 [466 kB] Get: 79 http://deb.debian.org/debian bullseye/main armhf libxcb-render0 armhf 1.14-3 [110 kB] Get: 80 http://deb.debian.org/debian bullseye/main armhf libxcb-shm0 armhf 1.14-3 [101 kB] Get: 81 http://deb.debian.org/debian bullseye/main armhf libxext6 armhf 2:1.3.3-1.1 [47.8 kB] Get: 82 http://deb.debian.org/debian bullseye/main armhf libxrender1 armhf 1:0.9.10-1 [29.9 kB] Get: 83 http://deb.debian.org/debian bullseye/main armhf libcairo2 armhf 1.16.0-5 [615 kB] Get: 84 http://deb.debian.org/debian bullseye/main armhf libltdl7 armhf 2.4.6-15 [388 kB] Get: 85 http://deb.debian.org/debian bullseye/main armhf libfribidi0 armhf 1.0.8-2 [62.9 kB] Get: 86 http://deb.debian.org/debian bullseye/main armhf libgraphite2-3 armhf 1.3.14-1 [70.5 kB] Get: 87 http://deb.debian.org/debian bullseye/main armhf libharfbuzz0b armhf 2.7.4-1 [1427 kB] Get: 88 http://deb.debian.org/debian bullseye/main armhf libthai-data all 0.1.28-3 [170 kB] Get: 89 http://deb.debian.org/debian bullseye/main armhf libdatrie1 armhf 0.2.13-1 [39.4 kB] Get: 90 http://deb.debian.org/debian bullseye/main armhf libthai0 armhf 0.1.28-3 [50.9 kB] Get: 91 http://deb.debian.org/debian bullseye/main armhf libpango-1.0-0 armhf 1.46.2-3 [173 kB] Get: 92 http://deb.debian.org/debian bullseye/main armhf libpangoft2-1.0-0 armhf 1.46.2-3 [56.1 kB] Get: 93 http://deb.debian.org/debian bullseye/main armhf libpangocairo-1.0-0 armhf 1.46.2-3 [46.8 kB] Get: 94 http://deb.debian.org/debian bullseye/main armhf libpathplan4 armhf 2.42.2-5 [61.9 kB] Get: 95 http://deb.debian.org/debian bullseye/main armhf libgvc6 armhf 2.42.2-5 [597 kB] Get: 96 http://deb.debian.org/debian bullseye/main armhf libgvpr2 armhf 2.42.2-5 [185 kB] Get: 97 http://deb.debian.org/debian bullseye/main armhf liblab-gamut1 armhf 2.42.2-5 [220 kB] Get: 98 http://deb.debian.org/debian bullseye/main armhf x11-common all 1:7.7+22 [252 kB] Get: 99 http://deb.debian.org/debian bullseye/main armhf libice6 armhf 2:1.0.10-1 [51.9 kB] Get: 100 http://deb.debian.org/debian bullseye/main armhf libsm6 armhf 2:1.2.3-1 [33.0 kB] Get: 101 http://deb.debian.org/debian bullseye/main armhf libxt6 armhf 1:1.2.0-1 [161 kB] Get: 102 http://deb.debian.org/debian bullseye/main armhf libxmu6 armhf 2:1.1.2-2+b3 [52.7 kB] Get: 103 http://deb.debian.org/debian bullseye/main armhf libxaw7 armhf 2:1.0.13-1.1 [167 kB] Get: 104 http://deb.debian.org/debian bullseye/main armhf graphviz armhf 2.42.2-5 [521 kB] Get: 105 http://deb.debian.org/debian bullseye/main armhf libappconfig-perl all 1.71-2.1 [67.6 kB] Get: 106 http://deb.debian.org/debian bullseye/main armhf libb-hooks-op-check-perl armhf 0.22-1+b3 [11.0 kB] Get: 107 http://deb.debian.org/debian bullseye/main armhf libcarp-clan-perl all 6.08-1 [15.6 kB] Get: 108 http://deb.debian.org/debian bullseye/main armhf libhtml-tagset-perl all 3.20-4 [13.0 kB] Get: 109 http://deb.debian.org/debian bullseye/main armhf liburi-perl all 5.08-1 [90.6 kB] Get: 110 http://deb.debian.org/debian bullseye/main armhf libhtml-parser-perl armhf 3.75-1+b1 [102 kB] Get: 111 http://deb.debian.org/debian bullseye/main armhf libcgi-pm-perl all 4.51-1 [224 kB] Get: 112 http://deb.debian.org/debian bullseye/main armhf libcgi-session-perl all 4.48-3 [119 kB] Get: 113 http://deb.debian.org/debian bullseye/main armhf libsub-name-perl armhf 0.26-1+b1 [13.2 kB] Get: 114 http://deb.debian.org/debian bullseye/main armhf libclass-accessor-perl all 0.51-1 [23.2 kB] Get: 115 http://deb.debian.org/debian bullseye/main armhf libclass-accessor-chained-perl all 0.01.1~debian-4 [8300 B] Get: 116 http://deb.debian.org/debian bullseye/main armhf libdbi-perl armhf 1.643-3+b1 [772 kB] Get: 117 http://deb.debian.org/debian bullseye/main armhf libdbix-contextualfetch-perl all 1.03-4.1 [8584 B] Get: 118 http://deb.debian.org/debian bullseye/main armhf libima-dbi-perl all 0.35-2.1 [23.1 kB] Get: 119 http://deb.debian.org/debian bullseye/main armhf libio-stringy-perl all 2.111-3 [56.5 kB] Get: 120 http://deb.debian.org/debian bullseye/main armhf libclass-trigger-perl all 0.15-1 [12.3 kB] Get: 121 http://deb.debian.org/debian bullseye/main armhf libuniversal-moniker-perl all 0.08-8.1 [7056 B] Get: 122 http://deb.debian.org/debian bullseye/main armhf libclone-perl armhf 0.45-1+b1 [14.8 kB] Get: 123 http://deb.debian.org/debian bullseye/main armhf libclass-dbi-perl all 3.0.17-4.1 [105 kB] Get: 124 http://deb.debian.org/debian bullseye/main armhf libdata-page-perl all 2.03-1 [11.6 kB] Get: 125 http://deb.debian.org/debian bullseye/main armhf libexporter-lite-perl all 0.08-1 [11.1 kB] Get: 126 http://deb.debian.org/debian bullseye/main armhf libclass-dbi-pager-perl all 0.08-5 [7916 B] Get: 127 http://deb.debian.org/debian bullseye/main armhf libsasl2-modules-db armhf 2.1.27+dfsg-2.1 [67.6 kB] Get: 128 http://deb.debian.org/debian bullseye/main armhf libsasl2-2 armhf 2.1.27+dfsg-2.1 [99.1 kB] Get: 129 http://deb.debian.org/debian bullseye/main armhf libldap-2.4-2 armhf 2.4.57+dfsg-3 [210 kB] Get: 130 http://deb.debian.org/debian bullseye/main armhf libpq5 armhf 13.3-1 [161 kB] Get: 131 http://deb.debian.org/debian bullseye/main armhf libdbd-pg-perl armhf 3.14.2-1+b1 [209 kB] Get: 132 http://deb.debian.org/debian bullseye/main armhf libclass-dbi-pg-perl all 0.09-5.1 [9484 B] Get: 133 http://deb.debian.org/debian bullseye/main armhf libclass-inspector-perl all 1.36-1 [19.6 kB] Get: 134 http://deb.debian.org/debian bullseye/main armhf libclass-makemethods-perl all 1.01-5 [294 kB] Get: 135 http://deb.debian.org/debian bullseye/main armhf libclass-method-modifiers-perl all 2.13-1 [19.2 kB] Get: 136 http://deb.debian.org/debian bullseye/main armhf libfreezethaw-perl all 0.5001-2.1 [16.9 kB] Get: 137 http://deb.debian.org/debian bullseye/main armhf libdbix-dbschema-perl all 0.45-1 [63.3 kB] Get: 138 http://deb.debian.org/debian bullseye/main armhf libparse-recdescent-perl all 1.967015+dfsg-2 [159 kB] Get: 139 http://deb.debian.org/debian bullseye/main armhf libencode-locale-perl all 1.05-1.1 [13.2 kB] Get: 140 http://deb.debian.org/debian bullseye/main armhf libtimedate-perl all 2.3300-2 [39.3 kB] Get: 141 http://deb.debian.org/debian bullseye/main armhf libhttp-date-perl all 6.05-1 [10.4 kB] Get: 142 http://deb.debian.org/debian bullseye/main armhf libfile-listing-perl all 6.14-1 [12.4 kB] Get: 143 http://deb.debian.org/debian bullseye/main armhf libhtml-tree-perl all 5.07-2 [213 kB] Get: 144 http://deb.debian.org/debian bullseye/main armhf libio-html-perl all 1.004-2 [16.1 kB] Get: 145 http://deb.debian.org/debian bullseye/main armhf liblwp-mediatypes-perl all 6.04-1 [19.9 kB] Get: 146 http://deb.debian.org/debian bullseye/main armhf libhttp-message-perl all 6.28-1 [79.6 kB] Get: 147 http://deb.debian.org/debian bullseye/main armhf libhttp-cookies-perl all 6.10-1 [19.6 kB] Get: 148 http://deb.debian.org/debian bullseye/main armhf libhttp-negotiate-perl all 6.01-1 [12.8 kB] Get: 149 http://deb.debian.org/debian bullseye/main armhf perl-openssl-defaults armhf 5 [7360 B] Get: 150 http://deb.debian.org/debian bullseye/main armhf libnet-ssleay-perl armhf 1.88-3+b1 [303 kB] Get: 151 http://deb.debian.org/debian bullseye/main armhf libio-socket-ssl-perl all 2.069-1 [215 kB] Get: 152 http://deb.debian.org/debian bullseye/main armhf libnet-http-perl all 6.20-1 [25.1 kB] Get: 153 http://deb.debian.org/debian bullseye/main armhf liblwp-protocol-https-perl all 6.10-1 [12.2 kB] Get: 154 http://deb.debian.org/debian bullseye/main armhf libtry-tiny-perl all 0.30-1 [23.3 kB] Get: 155 http://deb.debian.org/debian bullseye/main armhf libwww-robotrules-perl all 6.02-1 [12.9 kB] Get: 156 http://deb.debian.org/debian bullseye/main armhf libwww-perl all 6.52-1 [192 kB] Get: 157 http://deb.debian.org/debian bullseye/main armhf libxml-parser-perl armhf 2.46-2 [203 kB] Get: 158 http://deb.debian.org/debian bullseye/main armhf libxml-perl all 0.08-3.1 [93.9 kB] Get: 159 http://deb.debian.org/debian bullseye/main armhf libdbix-dbstag-perl all 0.12-2 [102 kB] Get: 160 http://deb.debian.org/debian bullseye/main armhf libdynaloader-functions-perl all 0.003-1.1 [12.7 kB] Get: 161 http://deb.debian.org/debian bullseye/main armhf libdevel-callchecker-perl armhf 0.008-1+b2 [15.7 kB] Get: 162 http://deb.debian.org/debian bullseye/main armhf libdigest-md5-file-perl all 0.08-1.1 [9608 B] Get: 163 http://deb.debian.org/debian bullseye/main armhf libfile-sharedir-perl all 1.118-1 [17.3 kB] Get: 164 http://deb.debian.org/debian bullseye/main armhf libgd-perl armhf 2.73-1+b1 [136 kB] Get: 165 http://deb.debian.org/debian bullseye/main armhf libio-pty-perl armhf 1:1.15-2 [36.2 kB] Get: 166 http://deb.debian.org/debian bullseye/main armhf libipc-run-perl all 20200505.0-1 [102 kB] Get: 167 http://deb.debian.org/debian bullseye/main armhf libxml-twig-perl all 1:3.52-1 [181 kB] Get: 168 http://deb.debian.org/debian bullseye/main armhf libxml-xpath-perl all 1.44-1 [69.5 kB] Get: 169 http://deb.debian.org/debian bullseye/main armhf libgraphviz-perl all 2.24-1 [92.7 kB] Get: 170 http://deb.debian.org/debian bullseye/main armhf libyaml-perl all 1.30-1 [67.7 kB] Get: 171 http://deb.debian.org/debian bullseye/main armhf libgo-perl all 0.15-9 [268 kB] Get: 172 http://deb.debian.org/debian bullseye/main armhf libheap-perl all 0.80-3 [34.2 kB] Get: 173 http://deb.debian.org/debian bullseye/main armhf libset-object-perl armhf 1.41-1 [38.3 kB] Get: 174 http://deb.debian.org/debian bullseye/main armhf libgraph-perl all 1:0.9716-2 [109 kB] Get: 175 http://deb.debian.org/debian bullseye/main armhf libparams-classify-perl armhf 0.015-1+b3 [24.5 kB] Get: 176 http://deb.debian.org/debian bullseye/main armhf libmodule-runtime-perl all 0.016-1 [19.4 kB] Get: 177 http://deb.debian.org/debian bullseye/main armhf libimport-into-perl all 1.002005-1 [11.6 kB] Get: 178 http://deb.debian.org/debian bullseye/main armhf liblog-log4perl-perl all 1.54-1 [378 kB] Get: 179 http://deb.debian.org/debian bullseye/main armhf libmodule-build-perl all 0.423100-1 [258 kB] Get: 180 http://deb.debian.org/debian bullseye/main armhf librole-tiny-perl all 2.002004-1 [21.4 kB] Get: 181 http://deb.debian.org/debian bullseye/main armhf libstrictures-perl all 2.000006-1 [18.6 kB] Get: 182 http://deb.debian.org/debian bullseye/main armhf libsub-quote-perl all 2.006006-1 [21.0 kB] Get: 183 http://deb.debian.org/debian bullseye/main armhf libmoo-perl all 2.004004-1 [59.9 kB] Get: 184 http://deb.debian.org/debian bullseye/main armhf libpackage-variant-perl all 1.003002-1.1 [21.2 kB] Get: 185 http://deb.debian.org/debian bullseye/main armhf libsql-translator-perl all 1.62-1 [394 kB] Get: 186 http://deb.debian.org/debian bullseye/main armhf libtemplate-perl armhf 2.27-1+b3 [563 kB] Get: 187 http://deb.debian.org/debian bullseye/main armhf libxml-namespacesupport-perl all 1.12-1.1 [14.9 kB] Get: 188 http://deb.debian.org/debian bullseye/main armhf libxml-sax-base-perl all 1.09-1.1 [20.7 kB] Get: 189 http://deb.debian.org/debian bullseye/main armhf libxml-sax-perl all 1.02+dfsg-1 [59.0 kB] Get: 190 http://deb.debian.org/debian bullseye/main armhf libxml-libxml-perl armhf 2.0134+dfsg-2+b1 [321 kB] Get: 191 http://deb.debian.org/debian bullseye/main armhf libxslt1.1 armhf 1.1.34-4 [220 kB] Get: 192 http://deb.debian.org/debian bullseye/main armhf libxml-libxslt-perl armhf 1.99-1+b1 [44.7 kB] Get: 193 http://deb.debian.org/debian bullseye/main armhf libxml-simple-perl all 2.25-1 [72.0 kB] Fetched 43.7 MB in 7s (5982 kB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package bsdextrautils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19398 files and directories currently installed.) Preparing to unpack .../000-bsdextrautils_2.36.1-7_armhf.deb ... Unpacking bsdextrautils (2.36.1-7) ... Selecting previously unselected package libuchardet0:armhf. Preparing to unpack .../001-libuchardet0_0.0.7-1_armhf.deb ... Unpacking libuchardet0:armhf (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../002-groff-base_1.22.4-6_armhf.deb ... 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Selecting previously unselected package libldap-2.4-2:armhf. Preparing to unpack .../128-libldap-2.4-2_2.4.57+dfsg-3_armhf.deb ... Unpacking libldap-2.4-2:armhf (2.4.57+dfsg-3) ... Selecting previously unselected package libpq5:armhf. Preparing to unpack .../129-libpq5_13.3-1_armhf.deb ... Unpacking libpq5:armhf (13.3-1) ... Selecting previously unselected package libdbd-pg-perl. Preparing to unpack .../130-libdbd-pg-perl_3.14.2-1+b1_armhf.deb ... Unpacking libdbd-pg-perl (3.14.2-1+b1) ... Selecting previously unselected package libclass-dbi-pg-perl. Preparing to unpack .../131-libclass-dbi-pg-perl_0.09-5.1_all.deb ... Unpacking libclass-dbi-pg-perl (0.09-5.1) ... Selecting previously unselected package libclass-inspector-perl. Preparing to unpack .../132-libclass-inspector-perl_1.36-1_all.deb ... Unpacking libclass-inspector-perl (1.36-1) ... Selecting previously unselected package libclass-makemethods-perl. Preparing to unpack .../133-libclass-makemethods-perl_1.01-5_all.deb ... 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Selecting previously unselected package libxml-parser-perl:armhf. Preparing to unpack .../156-libxml-parser-perl_2.46-2_armhf.deb ... Unpacking libxml-parser-perl:armhf (2.46-2) ... Selecting previously unselected package libxml-perl. Preparing to unpack .../157-libxml-perl_0.08-3.1_all.deb ... Unpacking libxml-perl (0.08-3.1) ... Selecting previously unselected package libdbix-dbstag-perl. Preparing to unpack .../158-libdbix-dbstag-perl_0.12-2_all.deb ... Unpacking libdbix-dbstag-perl (0.12-2) ... Selecting previously unselected package libdynaloader-functions-perl. Preparing to unpack .../159-libdynaloader-functions-perl_0.003-1.1_all.deb ... Unpacking libdynaloader-functions-perl (0.003-1.1) ... Selecting previously unselected package libdevel-callchecker-perl. Preparing to unpack .../160-libdevel-callchecker-perl_0.008-1+b2_armhf.deb ... Unpacking libdevel-callchecker-perl (0.008-1+b2) ... Selecting previously unselected package libdigest-md5-file-perl. 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Selecting previously unselected package libxml-xpath-perl. Preparing to unpack .../167-libxml-xpath-perl_1.44-1_all.deb ... Unpacking libxml-xpath-perl (1.44-1) ... Selecting previously unselected package libgraphviz-perl. Preparing to unpack .../168-libgraphviz-perl_2.24-1_all.deb ... Unpacking libgraphviz-perl (2.24-1) ... Selecting previously unselected package libyaml-perl. Preparing to unpack .../169-libyaml-perl_1.30-1_all.deb ... Unpacking libyaml-perl (1.30-1) ... Selecting previously unselected package libgo-perl. Preparing to unpack .../170-libgo-perl_0.15-9_all.deb ... Unpacking libgo-perl (0.15-9) ... Selecting previously unselected package libheap-perl. Preparing to unpack .../171-libheap-perl_0.80-3_all.deb ... Unpacking libheap-perl (0.80-3) ... Selecting previously unselected package libset-object-perl. Preparing to unpack .../172-libset-object-perl_1.41-1_armhf.deb ... Unpacking libset-object-perl (1.41-1) ... Selecting previously unselected package libgraph-perl. 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Adding 'diversion of /usr/bin/config_data to /usr/bin/config_data.diverted by libmodule-build-perl' Adding 'diversion of /usr/share/man/man1/config_data.1.gz to /usr/share/man/man1/config_data.diverted.1.gz by libmodule-build-perl' Unpacking libmodule-build-perl (0.423100-1) ... Selecting previously unselected package librole-tiny-perl. Preparing to unpack .../179-librole-tiny-perl_2.002004-1_all.deb ... Unpacking librole-tiny-perl (2.002004-1) ... Selecting previously unselected package libstrictures-perl. Preparing to unpack .../180-libstrictures-perl_2.000006-1_all.deb ... Unpacking libstrictures-perl (2.000006-1) ... Selecting previously unselected package libsub-quote-perl. Preparing to unpack .../181-libsub-quote-perl_2.006006-1_all.deb ... Unpacking libsub-quote-perl (2.006006-1) ... Selecting previously unselected package libmoo-perl. Preparing to unpack .../182-libmoo-perl_2.004004-1_all.deb ... Unpacking libmoo-perl (2.004004-1) ... 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Setting up libuniversal-moniker-perl (0.08-8.1) ... Setting up libxau6:armhf (1:1.0.9-1) ... Setting up bsdextrautils (2.36.1-7) ... update-alternatives: using /usr/bin/write.ul to provide /usr/bin/write (write) in auto mode Setting up libclass-inspector-perl (1.36-1) ... Setting up libicu67:armhf (67.1-7) ... Setting up libdynaloader-functions-perl (0.003-1.1) ... Setting up libdatrie1:armhf (0.2.13-1) ... Setting up libtest-deep-perl (1.130-1) ... Setting up libclass-method-modifiers-perl (2.13-1) ... Setting up libio-pty-perl (1:1.15-2) ... Setting up libmagic-mgc (1:5.39-3) ... Setting up libclone-perl (0.45-1+b1) ... Setting up libalgorithm-diff-perl (1.201-1) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libglib2.0-0:armhf (2.66.8-1) ... No schema files found: doing nothing. Setting up libio-stringy-perl (2.111-3) ... Setting up libhtml-tagset-perl (3.20-4) ... Setting up libdebhelper-perl (13.3.4) ... Setting up libbrotli1:armhf (1.0.9-2+b2) ... Setting up libheap-perl (0.80-3) ... Setting up liblwp-mediatypes-perl (6.04-1) ... Setting up liblab-gamut1:armhf (2.42.2-5) ... Setting up x11-common (1:7.7+22) ... invoke-rc.d: could not determine current runlevel Setting up X socket directories... /tmp/.X11-unix /tmp/.ICE-unix. Setting up libtry-tiny-perl (0.30-1) ... Setting up libmagic1:armhf (1:5.39-3) ... Setting up libdeflate0:armhf (1.7-1) ... Setting up perl-openssl-defaults:armhf (5) ... Setting up libxml-namespacesupport-perl (1.12-1.1) ... Setting up gettext-base (0.21-4) ... Setting up libencode-locale-perl (1.05-1.1) ... Setting up file (1:5.39-3) ... Setting up libyaml-perl (1.30-1) ... Setting up libjbig0:armhf (2.1-3.1+b2) ... Setting up libmodule-build-perl (0.423100-1) ... Setting up libfreezethaw-perl (0.5001-2.1) ... Setting up libsasl2-modules-db:armhf (2.1.27+dfsg-2.1) ... Setting up libgts-0.7-5:armhf (0.7.6+darcs121130-4+b1) ... Setting up libxml-sax-base-perl (1.09-1.1) ... Setting up libio-string-perl (1.08-3.1) ... Setting up autotools-dev (20180224.1+nmu1) ... Setting up libclass-data-inheritable-perl (0.08-3) ... Setting up libset-object-perl (1.41-1) ... Setting up liblog-log4perl-perl (1.54-1) ... Setting up libjpeg62-turbo:armhf (1:2.0.6-4) ... Setting up libx11-data (2:1.7.1-1) ... Setting up libtext-diff-perl (1.45-1) ... Setting up libpathplan4:armhf (2.42.2-5) ... Setting up libsigsegv2:armhf (2.13-1) ... Setting up libfribidi0:armhf (1.0.8-2) ... Setting up libpng16-16:armhf (1.6.37-3) ... Setting up libio-html-perl (1.004-2) ... Setting up autopoint (0.21-4) ... Setting up libwebp6:armhf (0.6.1-2.1) ... Setting up libb-hooks-op-check-perl (0.22-1+b3) ... Setting up fonts-dejavu-core (2.37-2) ... Setting up libipc-run-perl (20200505.0-1) ... Setting up libltdl7:armhf (2.4.6-15) ... Setting up libsasl2-2:armhf (2.1.27+dfsg-2.1) ... Setting up libcapture-tiny-perl (0.48-1) ... Setting up libtimedate-perl (2.3300-2) ... Setting up libexporter-lite-perl (0.08-1) ... Setting up libsub-name-perl (0.26-1+b1) ... Setting up libmd0:armhf (1.0.3-3) ... Setting up libdata-stag-perl (0.14-2) ... Setting up libparse-recdescent-perl (1.967015+dfsg-2) ... Setting up libclass-trigger-perl (0.15-1) ... Setting up sensible-utils (0.0.14) ... Setting up libuchardet0:armhf (0.0.7-1) ... Setting up librole-tiny-perl (2.002004-1) ... Setting up libfile-sharedir-perl (1.118-1) ... Setting up libsub-uplevel-perl (0.2800-1.1) ... Setting up libsub-override-perl (0.09-2) ... Setting up libthai-data (0.1.28-3) ... Setting up libcarp-clan-perl (6.08-1) ... Setting up netbase (6.3) ... Setting up libstrictures-perl (2.000006-1) ... Setting up libsub-quote-perl (2.006006-1) ... Setting up libdevel-stacktrace-perl (2.0400-1) ... Setting up libcdt5:armhf (2.42.2-5) ... Setting up libcgraph6:armhf (2.42.2-5) ... Setting up libtiff5:armhf (4.2.0-1) ... Setting up libbio-perl-perl (1.7.7-2) ... Setting up libclass-accessor-perl (0.51-1) ... Setting up openssl (1.1.1k-1) ... Setting up libbsd0:armhf (0.11.3-1) ... Setting up libelf1:armhf (0.183-1) ... Setting up libxml2:armhf (2.9.10+dfsg-6.7) ... Setting up liburi-perl (5.08-1) ... Setting up libappconfig-perl (1.71-2.1) ... Setting up libdbi-perl:armhf (1.643-3+b1) ... Setting up libclass-makemethods-perl (1.01-5) ... Setting up libnet-ssleay-perl (1.88-3+b1) ... Setting up libfile-stripnondeterminism-perl (1.12.0-1) ... Setting up libice6:armhf (2:1.0.10-1) ... Setting up libhttp-date-perl (6.05-1) ... Setting up libxdmcp6:armhf (1:1.1.2-3) ... Setting up libxcb1:armhf (1.14-3) ... Setting up gettext (0.21-4) ... Setting up libfile-listing-perl (6.14-1) ... Setting up libdbix-dbschema-perl (0.45-1) ... Setting up libtool (2.4.6-15) ... Setting up libxcb-render0:armhf (1.14-3) ... Setting up libtest-warn-perl (0.36-1) ... Setting up libtest-differences-perl (0.67-1) ... Setting up libldap-2.4-2:armhf (2.4.57+dfsg-3) ... Setting up libnet-http-perl (6.20-1) ... Setting up m4 (1.4.18-5) ... Setting up libclass-accessor-chained-perl (0.01.1~debian-4) ... Setting up libxcb-shm0:armhf (1.14-3) ... Setting up libexception-class-perl (1.44-1) ... Setting up libgraph-perl (1:0.9716-2) ... Setting up libdevel-callchecker-perl (0.008-1+b2) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up libdbix-contextualfetch-perl (1.03-4.1) ... Setting up libthai0:armhf (0.1.28-3) ... Setting up ca-certificates (20210119) ... Updating certificates in /etc/ssl/certs... 129 added, 0 removed; done. Setting up libima-dbi-perl (0.35-2.1) ... Setting up libtest-exception-perl (0.43-1) ... Setting up libdata-page-perl (2.03-1) ... Setting up libfreetype6:armhf (2.10.4+dfsg-1) ... Setting up ucf (3.0043) ... Setting up libtemplate-perl (2.27-1+b3) ... Setting up autoconf (2.69-14) ... Setting up dh-strip-nondeterminism (1.12.0-1) ... Setting up libwww-robotrules-perl (6.02-1) ... Setting up libgvpr2:armhf (2.42.2-5) ... Setting up dwz (0.13+20210201-1) ... Setting up groff-base (1.22.4-6) ... Setting up libhtml-parser-perl (3.75-1+b1) ... Setting up libxslt1.1:armhf (1.1.34-4) ... Setting up libclass-dbi-perl (3.0.17-4.1) ... Setting up libx11-6:armhf (2:1.7.1-1) ... Setting up libharfbuzz0b:armhf (2.7.4-1) ... Setting up libsm6:armhf (2:1.2.3-1) ... Setting up libio-socket-ssl-perl (2.069-1) ... Setting up libhttp-message-perl (6.28-1) ... Setting up automake (1:1.16.3-2) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libhttp-negotiate-perl (6.01-1) ... Setting up libxpm4:armhf (1:3.5.12-1) ... Setting up libxrender1:armhf (1:0.9.10-1) ... Setting up libhttp-cookies-perl (6.10-1) ... Setting up libtest-most-perl (0.37-1) ... Setting up fontconfig-config (2.13.1-4.2) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libhtml-tree-perl (5.07-2) ... Setting up libparams-classify-perl (0.015-1+b3) ... Setting up libcgi-pm-perl (4.51-1) ... Setting up libpq5:armhf (13.3-1) ... Setting up libxext6:armhf (2:1.3.3-1.1) ... Setting up libdbd-pg-perl (3.14.2-1+b1) ... Setting up man-db (2.9.4-2) ... Not building database; man-db/auto-update is not 'true'. Setting up libxml-sax-perl (1.02+dfsg-1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::SAX::PurePerl with priority 10... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Creating config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up dh-autoreconf (20) ... Setting up libmodule-runtime-perl (0.016-1) ... Setting up libcgi-session-perl (4.48-3) ... Setting up libclass-dbi-pager-perl (0.08-5) ... Setting up libxt6:armhf (1:1.2.0-1) ... Setting up libxml-libxml-perl (2.0134+dfsg-2+b1) ... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX::Parser with priority 50... update-perl-sax-parsers: Registering Perl SAX parser XML::LibXML::SAX with priority 50... update-perl-sax-parsers: Updating overall Perl SAX parser modules info file... Replacing config file /etc/perl/XML/SAX/ParserDetails.ini with new version Setting up libfontconfig1:armhf (2.13.1-4.2) ... Setting up bioperl (1.7.7-2) ... Setting up fontconfig (2.13.1-4.2) ... Regenerating fonts cache... done. Setting up libclass-dbi-pg-perl (0.09-5.1) ... Setting up libxmu6:armhf (2:1.1.2-2+b3) ... Setting up libimport-into-perl (1.002005-1) ... Setting up libmoo-perl (2.004004-1) ... Setting up libpango-1.0-0:armhf (1.46.2-3) ... Setting up debhelper (13.3.4) ... Setting up libxaw7:armhf (2:1.0.13-1.1) ... Setting up libcairo2:armhf (1.16.0-5) ... Setting up libgd3:armhf (2.3.0-2) ... Setting up libxml-simple-perl (2.25-1) ... Setting up libxml-libxslt-perl (1.99-1+b1) ... Setting up libpangoft2-1.0-0:armhf (1.46.2-3) ... Setting up libpackage-variant-perl (1.003002-1.1) ... Setting up libpangocairo-1.0-0:armhf (1.46.2-3) ... Setting up libsql-translator-perl (1.62-1) ... Setting up libgd-perl (2.73-1+b1) ... Setting up libgvc6 (2.42.2-5) ... Setting up graphviz (2.42.2-5) ... Setting up liblwp-protocol-https-perl (6.10-1) ... Setting up libwww-perl (6.52-1) ... Setting up libdigest-md5-file-perl (0.08-1.1) ... Setting up libxml-parser-perl:armhf (2.46-2) ... Setting up libxml-twig-perl (1:3.52-1) ... Setting up libxml-xpath-perl (1.44-1) ... Setting up libxml-perl (0.08-3.1) ... Setting up libgraphviz-perl (2.24-1) ... Setting up libdbix-dbstag-perl (0.12-2) ... Setting up libgo-perl (0.15-9) ... Processing triggers for libc-bin (2.31-13) ... Processing triggers for ca-certificates (20210119) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps Reading package lists... Building dependency tree... Reading state information... fakeroot is already the newest version (1.25.3-1.1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package I: Running cd /build/libchado-perl-1.31/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../libchado-perl_1.31-6_source.changes dpkg-buildpackage: info: source package libchado-perl dpkg-buildpackage: info: source version 1.31-6 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Olivier Sallou dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf fakeroot debian/rules clean dh clean --buildsystem=perl_makemaker dh_auto_clean -O--buildsystem=perl_makemaker dh_autoreconf_clean -O--buildsystem=perl_makemaker dh_clean -O--buildsystem=perl_makemaker debian/rules build dh build --buildsystem=perl_makemaker dh_update_autotools_config -O--buildsystem=perl_makemaker dh_autoreconf -O--buildsystem=perl_makemaker debian/rules override_dh_auto_configure make[1]: Entering directory '/build/libchado-perl-1.31' perl Makefile.PL INSTALL_BASE=/usr DBNAME=gmod-chado DBUSER=chado DBPASS=chado DBHOST=localhost DBPORT=5432 GMOD_ROOT=/build/libchado-perl-1.31/debian/libchado-perl/usr/share/gmod/chado DBDRIVER=PostgreSQL RECONFIGURE=1 SIMPLE=Y LOCAL_TMP=/build/libchado-perl-1.31/debian/libchado-perl/tmp Building with the following database options: GMOD_ROOT=/build/libchado-perl-1.31/debian/libchado-perl/usr/share/gmod/chado DBDRIVER=PostgreSQL DBNAME=gmod-chado DBUSER=chado DBPASS=chado DBHOST=localhost DBPORT=5432 SCHEMA= LOCAL_TMP=/build/libchado-perl-1.31/debian/libchado-perl/tmp DBORGANISM= DEFAULT= VERSION=1.31 Extracting /build/libchado-perl-1.31/bin/../lib/Bio/Chado/AutoDBI.pm (with variable substitutions) initializing load scripts... Created MYMETA.yml and MYMETA.json Creating new 'Build' script for 'Chado' version '1.31' Building Chado Checking if your kit is complete... Looks good Warning: prerequisite Bio::Chado::Schema 0 not found. Generating a Unix-style Makefile Writing Makefile for chado Writing MYMETA.yml and MYMETA.json -=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=- Makefile written. Now you should do the following, in order: 1. make (creates necessary build files) 2. sudo make install (creates $GMOD_ROOT and subdirectories) -*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*WARNING-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-* STEP 3 WILL DELETE ANY DATA IN A DATABASE WITH THE DATABASE NAME YOU PROVIDED! -*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*WARNING-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-* 3a. make load_schema (loads SQL schema into database) or 3b. make update (update an old Chado schema and stop here) 4. make prepdb (loads basic data) 5. make ontologies (loads data for various ontologies) Optional Targets: make rm_locks (removes ontology lock files, allowing installation of ontologies on successive builds of the database without removing the ontology files altogether) make clean (remove build related files and ontology tmp dir) make instructions (at any moment display these instructions) -=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=-=- make[1]: Leaving directory '/build/libchado-perl-1.31' dh_auto_build -O--buildsystem=perl_makemaker make -j3 make[1]: Entering directory '/build/libchado-perl-1.31' Skip blib/lib/Bio/GMOD/DB/Tools/ETA.pm (unchanged) Skip blib/lib/Bio/GMOD/DB/Adapter.pm (unchanged) Skip blib/lib/Bio/GMOD/Config2.pm (unchanged) Skip blib/lib/Bio/GMOD/SeqUtils.pm (unchanged) Skip blib/lib/Bio/Chado/Builder.pm (unchanged) Skip blib/lib/Bio/GMOD/Bulkfiles/GenbankSubmitWriter.pm (unchanged) Skip blib/lib/Bio/GMOD/Bulkfiles/GnomapWriter.pm (unchanged) Skip blib/lib/Bio/GMOD/Bulkfiles/SWISS_CRC64.pm (unchanged) Skip blib/lib/Bio/GMOD/Load/GFF.pm (unchanged) Skip blib/lib/Bio/GMOD/Bulkfiles/FastaWriter.pm (unchanged) Skip blib/lib/Bio/GMOD/Config.pm (unchanged) Skip blib/lib/Bio/FeatureIO/chadobulk.pm (unchanged) Skip blib/lib/Bio/GMOD/DB/Config.pm (unchanged) Skip blib/lib/Bio/GMOD/Bulkfiles/TableWriter.pm (unchanged) Skip blib/lib/Bio/GMOD/Bulkfiles/BulkWriter.pm (unchanged) Skip blib/lib/Bio/GMOD/Bulkfiles/MySplitLocation.pm (unchanged) Skip blib/lib/Bio/GMOD/Load.pm (unchanged) Skip blib/lib/Bio/GMOD/Bulkfiles/MyLargePrimarySeq.pm (unchanged) Skip blib/lib/Bio/GMOD/Bulkfiles/FeatureWriter.pm (unchanged) Skip blib/lib/Bio/GMOD/DB/Adapter/FeatureIterator.pm (unchanged) Skip blib/lib/Bio/GMOD/DB/Adapter/Wormbase.pm (unchanged) Skip blib/lib/Bio/FeatureIO/chado.pm (unchanged) Skip blib/lib/Bio/Chado/AutoDBI.pm (unchanged) Skip blib/lib/Bio/Chado/Config.pm (unchanged) Skip blib/lib/Bio/GMOD/Bulkfiles/AcodeWriter.pm (unchanged) Skip blib/lib/Bio/GMOD/Bulkfiles/BlastWriter.pm (unchanged) Skip blib/lib/Bio/GMOD/Bulkfiles.pm (unchanged) "/usr/bin/perl" "-Iblib/arch" "-Iblib/lib" load/bin/bulk_load_gff3.PLS load/bin/gmod_bulk_load_gff3.pl "/usr/bin/perl" "-Iblib/arch" "-Iblib/lib" install_util/conf_install.PLS install_util/conf_install.pl Extracting conf_install.pl (with variable substitutions) "/usr/bin/perl" "-Iblib/arch" "-Iblib/lib" install_util/src_install.PLS install_util/src_install.pl Extracting src_install.pl (with variable substitutions) cp bin/gmod_add_organism.pl blib/script/gmod_add_organism.pl "/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/gmod_add_organism.pl cp bin/gmod_apollo_triggers.pl blib/script/gmod_apollo_triggers.pl "/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/gmod_apollo_triggers.pl cp load/bin/gmod_bulk_load_gff3.pl blib/script/gmod_bulk_load_gff3.pl "/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/gmod_bulk_load_gff3.pl cp bin/gmod_bulk_load_pubmed.pl blib/script/gmod_bulk_load_pubmed.pl "/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/gmod_bulk_load_pubmed.pl cp bin/gmod_chado_properties.pl blib/script/gmod_chado_properties.pl "/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/gmod_chado_properties.pl cp bin/gmod_extract_dbxref_from_gff.pl blib/script/gmod_extract_dbxref_from_gff.pl "/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/gmod_extract_dbxref_from_gff.pl cp bin/gmod_fasta2gff3.pl blib/script/gmod_fasta2gff3.pl "/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/gmod_fasta2gff3.pl cp bin/gmod_gff3_preprocessor.pl blib/script/gmod_gff3_preprocessor.pl "/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/gmod_gff3_preprocessor.pl cp bin/gmod_load_cvterms.pl blib/script/gmod_load_cvterms.pl "/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/gmod_load_cvterms.pl cp bin/gmod_make_cvtermpath.pl blib/script/gmod_make_cvtermpath.pl "/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/gmod_make_cvtermpath.pl cp bin/gmod_make_gff_from_dbxref.pl blib/script/gmod_make_gff_from_dbxref.pl "/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/gmod_make_gff_from_dbxref.pl cp bin/gmod_materialized_view_tool.pl blib/script/gmod_materialized_view_tool.pl "/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/gmod_materialized_view_tool.pl cp bin/gmod_sort_gff3.pl blib/script/gmod_sort_gff3.pl "/usr/bin/perl" -MExtUtils::MY -e 'MY->fixin(shift)' -- blib/script/gmod_sort_gff3.pl Manifying 12 pod documents Manifying 26 pod documents make[1]: Leaving directory '/build/libchado-perl-1.31' debian/rules override_dh_auto_test make[1]: Entering directory '/build/libchado-perl-1.31' echo "Skipping tests to avoid db access" Skipping tests to avoid db access make[1]: Leaving directory '/build/libchado-perl-1.31' create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary dh binary --buildsystem=perl_makemaker dh_testroot -O--buildsystem=perl_makemaker dh_prep -O--buildsystem=perl_makemaker dh_installdirs -O--buildsystem=perl_makemaker dh_auto_install -O--buildsystem=perl_makemaker make -j3 install DESTDIR=/build/libchado-perl-1.31/debian/tmp AM_UPDATE_INFO_DIR=no PREFIX=/usr make[1]: Entering directory '/build/libchado-perl-1.31' "/usr/bin/perl" "/build/libchado-perl-1.31/install_util/conf_install.pl" 'GMOD_ROOT=/build/libchado-perl-1.31/debian/libchado-perl/usr/share/gmod/chado' 'VERSION=1.31' "/usr/bin/perl" "/build/libchado-perl-1.31/install_util/src_install.pl" 'GMOD_ROOT=/build/libchado-perl-1.31/debian/libchado-perl/usr/share/gmod/chado' Manifying 12 pod documents Manifying 26 pod documents Appending installation info to /build/libchado-perl-1.31/debian/tmp/usr/lib/perl5/arm-linux-gnueabihf-thread-multi-64int/perllocal.pod Installing /build/libchado-perl-1.31/debian/tmp/usr/lib/perl5/Bio/FeatureIO/chado.pm Installing /build/libchado-perl-1.31/debian/tmp/usr/lib/perl5/Bio/FeatureIO/chadobulk.pm Installing /build/libchado-perl-1.31/debian/tmp/usr/lib/perl5/Bio/Chado/Config.pm Installing /build/libchado-perl-1.31/debian/tmp/usr/lib/perl5/Bio/Chado/AutoDBI.pm Installing /build/libchado-perl-1.31/debian/tmp/usr/lib/perl5/Bio/Chado/Builder.pm Installing /build/libchado-perl-1.31/debian/tmp/usr/lib/perl5/Bio/GMOD/Config.pm Installing /build/libchado-perl-1.31/debian/tmp/usr/lib/perl5/Bio/GMOD/Load.pm Installing /build/libchado-perl-1.31/debian/tmp/usr/lib/perl5/Bio/GMOD/SeqUtils.pm Installing /build/libchado-perl-1.31/debian/tmp/usr/lib/perl5/Bio/GMOD/Bulkfiles.pm Installing /build/libchado-perl-1.31/debian/tmp/usr/lib/perl5/Bio/GMOD/Config2.pm Installing /build/libchado-perl-1.31/debian/tmp/usr/lib/perl5/Bio/GMOD/DB/Config.pm Installing /build/libchado-perl-1.31/debian/tmp/usr/lib/perl5/Bio/GMOD/DB/Adapter.pm Installing /build/libchado-perl-1.31/debian/tmp/usr/lib/perl5/Bio/GMOD/DB/Tools/ETA.pm Installing /build/libchado-perl-1.31/debian/tmp/usr/lib/perl5/Bio/GMOD/DB/Adapter/Wormbase.pm Installing /build/libchado-perl-1.31/debian/tmp/usr/lib/perl5/Bio/GMOD/DB/Adapter/FeatureIterator.pm Installing /build/libchado-perl-1.31/debian/tmp/usr/lib/perl5/Bio/GMOD/Load/GFF.pm Installing /build/libchado-perl-1.31/debian/tmp/usr/lib/perl5/Bio/GMOD/Bulkfiles/MyLargePrimarySeq.pm Installing /build/libchado-perl-1.31/debian/tmp/usr/lib/perl5/Bio/GMOD/Bulkfiles/GnomapWriter.pm Installing /build/libchado-perl-1.31/debian/tmp/usr/lib/perl5/Bio/GMOD/Bulkfiles/BulkWriter.pm Installing /build/libchado-perl-1.31/debian/tmp/usr/lib/perl5/Bio/GMOD/Bulkfiles/SWISS_CRC64.pm Installing /build/libchado-perl-1.31/debian/tmp/usr/lib/perl5/Bio/GMOD/Bulkfiles/GenbankSubmitWriter.pm Installing /build/libchado-perl-1.31/debian/tmp/usr/lib/perl5/Bio/GMOD/Bulkfiles/AcodeWriter.pm Installing /build/libchado-perl-1.31/debian/tmp/usr/lib/perl5/Bio/GMOD/Bulkfiles/BlastWriter.pm Installing /build/libchado-perl-1.31/debian/tmp/usr/lib/perl5/Bio/GMOD/Bulkfiles/FastaWriter.pm Installing /build/libchado-perl-1.31/debian/tmp/usr/lib/perl5/Bio/GMOD/Bulkfiles/TableWriter.pm Installing /build/libchado-perl-1.31/debian/tmp/usr/lib/perl5/Bio/GMOD/Bulkfiles/MySplitLocation.pm Installing /build/libchado-perl-1.31/debian/tmp/usr/lib/perl5/Bio/GMOD/Bulkfiles/FeatureWriter.pm Installing /build/libchado-perl-1.31/debian/tmp/usr/man/man1/gmod_add_organism.pl.1p Installing /build/libchado-perl-1.31/debian/tmp/usr/man/man1/gmod_load_cvterms.pl.1p Installing /build/libchado-perl-1.31/debian/tmp/usr/man/man1/gmod_sort_gff3.pl.1p Installing /build/libchado-perl-1.31/debian/tmp/usr/man/man1/gmod_fasta2gff3.pl.1p Installing /build/libchado-perl-1.31/debian/tmp/usr/man/man1/gmod_extract_dbxref_from_gff.pl.1p Installing /build/libchado-perl-1.31/debian/tmp/usr/man/man1/gmod_make_gff_from_dbxref.pl.1p Installing /build/libchado-perl-1.31/debian/tmp/usr/man/man1/gmod_chado_properties.pl.1p Installing /build/libchado-perl-1.31/debian/tmp/usr/man/man1/gmod_make_cvtermpath.pl.1p Installing /build/libchado-perl-1.31/debian/tmp/usr/man/man1/gmod_gff3_preprocessor.pl.1p Installing /build/libchado-perl-1.31/debian/tmp/usr/man/man1/gmod_materialized_view_tool.pl.1p Installing /build/libchado-perl-1.31/debian/tmp/usr/man/man1/gmod_bulk_load_pubmed.pl.1p Installing /build/libchado-perl-1.31/debian/tmp/usr/man/man1/gmod_bulk_load_gff3.pl.1p Installing /build/libchado-perl-1.31/debian/tmp/usr/man/man3/Bio::Chado::Builder.3pm Installing /build/libchado-perl-1.31/debian/tmp/usr/man/man3/Bio::GMOD::Bulkfiles::FastaWriter.3pm Installing /build/libchado-perl-1.31/debian/tmp/usr/man/man3/Bio::GMOD::Config.3pm Installing /build/libchado-perl-1.31/debian/tmp/usr/man/man3/Bio::GMOD::Bulkfiles::MySplitLocation.3pm Installing /build/libchado-perl-1.31/debian/tmp/usr/man/man3/Bio::FeatureIO::chado.3pm Installing /build/libchado-perl-1.31/debian/tmp/usr/man/man3/Bio::GMOD::Bulkfiles::FeatureWriter.3pm Installing /build/libchado-perl-1.31/debian/tmp/usr/man/man3/Bio::Chado::Config.3pm Installing /build/libchado-perl-1.31/debian/tmp/usr/man/man3/Bio::GMOD::DB::Adapter::Wormbase.3pm Installing /build/libchado-perl-1.31/debian/tmp/usr/man/man3/Bio::GMOD::Bulkfiles::MyLargePrimarySeq.3pm Installing /build/libchado-perl-1.31/debian/tmp/usr/man/man3/Bio::GMOD::Bulkfiles::SWISS_CRC64.3pm Installing /build/libchado-perl-1.31/debian/tmp/usr/man/man3/Bio::GMOD::Config2.3pm Installing /build/libchado-perl-1.31/debian/tmp/usr/man/man3/Bio::GMOD::SeqUtils.3pm Installing /build/libchado-perl-1.31/debian/tmp/usr/man/man3/Bio::FeatureIO::chadobulk.3pm Installing /build/libchado-perl-1.31/debian/tmp/usr/man/man3/Bio::GMOD::Bulkfiles::GnomapWriter.3pm Installing /build/libchado-perl-1.31/debian/tmp/usr/man/man3/Bio::GMOD::DB::Tools::ETA.3pm Installing /build/libchado-perl-1.31/debian/tmp/usr/man/man3/Bio::GMOD::Bulkfiles.3pm Installing /build/libchado-perl-1.31/debian/tmp/usr/man/man3/Bio::GMOD::DB::Adapter.3pm Installing /build/libchado-perl-1.31/debian/tmp/usr/man/man3/Bio::GMOD::Load::GFF.3pm Installing /build/libchado-perl-1.31/debian/tmp/usr/man/man3/Bio::GMOD::Load.3pm Installing /build/libchado-perl-1.31/debian/tmp/usr/man/man3/Bio::GMOD::Bulkfiles::AcodeWriter.3pm Installing /build/libchado-perl-1.31/debian/tmp/usr/man/man3/Bio::GMOD::DB::Adapter::FeatureIterator.3pm Installing /build/libchado-perl-1.31/debian/tmp/usr/man/man3/Bio::GMOD::DB::Config.3pm Installing /build/libchado-perl-1.31/debian/tmp/usr/man/man3/Bio::GMOD::Bulkfiles::TableWriter.3pm Installing /build/libchado-perl-1.31/debian/tmp/usr/man/man3/Bio::GMOD::Bulkfiles::GenbankSubmitWriter.3pm Installing /build/libchado-perl-1.31/debian/tmp/usr/man/man3/Bio::GMOD::Bulkfiles::BlastWriter.3pm Installing /build/libchado-perl-1.31/debian/tmp/usr/man/man3/Bio::GMOD::Bulkfiles::BulkWriter.3pm Installing /build/libchado-perl-1.31/debian/tmp/usr/bin/addcascades Installing /build/libchado-perl-1.31/debian/tmp/usr/bin/make_cvtermpath.pl Installing /build/libchado-perl-1.31/debian/tmp/usr/bin/gmod_sort_gff3.pl Installing /build/libchado-perl-1.31/debian/tmp/usr/bin/create_so_bridge_command Installing /build/libchado-perl-1.31/debian/tmp/usr/bin/load_ncbi_taxonomy.pl Installing /build/libchado-perl-1.31/debian/tmp/usr/bin/make_partial_indexes.pl Installing /build/libchado-perl-1.31/debian/tmp/usr/bin/chado-fix-flybase-instance.pl Installing /build/libchado-perl-1.31/debian/tmp/usr/bin/pg2graphviz_svg.pl Installing /build/libchado-perl-1.31/debian/tmp/usr/bin/gmod_update_chado.pl Installing /build/libchado-perl-1.31/debian/tmp/usr/bin/ddltrans Installing /build/libchado-perl-1.31/debian/tmp/usr/bin/pg2graphviz.pl Installing /build/libchado-perl-1.31/debian/tmp/usr/bin/test_load.pl Installing /build/libchado-perl-1.31/debian/tmp/usr/bin/pg2diagram.pl Installing /build/libchado-perl-1.31/debian/tmp/usr/bin/pg2cdbi.pl Installing /build/libchado-perl-1.31/debian/tmp/usr/bin/load_taxonomy_cvterms.pl Installing /build/libchado-perl-1.31/debian/tmp/usr/bin/AutoDBI.PL Installing /build/libchado-perl-1.31/debian/tmp/usr/bin/ucsc_genes2gff.pl Installing /build/libchado-perl-1.31/debian/tmp/usr/bin/pg2cdbi_viaTT.pl Installing /build/libchado-perl-1.31/debian/tmp/usr/bin/gmod_gff3_preprocessor.pl Installing /build/libchado-perl-1.31/debian/tmp/usr/bin/gmod_add_organism.pl Installing /build/libchado-perl-1.31/debian/tmp/usr/bin/gmod_fasta2gff3.pl Installing /build/libchado-perl-1.31/debian/tmp/usr/bin/make_cvtermpath.sh Installing /build/libchado-perl-1.31/debian/tmp/usr/bin/gmod_load_cvterms.pl Installing /build/libchado-perl-1.31/debian/tmp/usr/bin/Skip_tables.pm Installing /build/libchado-perl-1.31/debian/tmp/usr/bin/gmod_bulk_load_pubmed.pl Installing /build/libchado-perl-1.31/debian/tmp/usr/bin/pg2html.pl Installing /build/libchado-perl-1.31/debian/tmp/usr/bin/config.PLS Installing /build/libchado-perl-1.31/debian/tmp/usr/bin/create-bridge-sql.pl Installing /build/libchado-perl-1.31/debian/tmp/usr/bin/gmod_materialized_view_tool.pl Installing /build/libchado-perl-1.31/debian/tmp/usr/bin/ucsc_snp2gff.pl Installing /build/libchado-perl-1.31/debian/tmp/usr/bin/gmod_make_gff_from_dbxref.pl Installing /build/libchado-perl-1.31/debian/tmp/usr/bin/gmod_bulk_load_gff3.pl Installing /build/libchado-perl-1.31/debian/tmp/usr/bin/interactions2SIF.pl Installing /build/libchado-perl-1.31/debian/tmp/usr/bin/gmod_bulkfiles.pl Installing /build/libchado-perl-1.31/debian/tmp/usr/bin/gmod_extract_dbxref_from_gff.pl Installing /build/libchado-perl-1.31/debian/tmp/usr/bin/create-so-bridge.pl Installing /build/libchado-perl-1.31/debian/tmp/usr/bin/GMODCallHome.pl Installing /build/libchado-perl-1.31/debian/tmp/usr/bin/chado-build-schema.pl Installing /build/libchado-perl-1.31/debian/tmp/usr/bin/test_load.sh Installing /build/libchado-perl-1.31/debian/tmp/usr/bin/gencode2sql.pl Installing /build/libchado-perl-1.31/debian/tmp/usr/bin/gmod_make_cvtermpath.pl Installing /build/libchado-perl-1.31/debian/tmp/usr/bin/privileges.tmpl Installing /build/libchado-perl-1.31/debian/tmp/usr/bin/gmod_chado_properties.pl Installing /build/libchado-perl-1.31/debian/tmp/usr/bin/dbi.tt2 Installing /build/libchado-perl-1.31/debian/tmp/usr/bin/gmod_dump_gff3.pl Installing /build/libchado-perl-1.31/debian/tmp/usr/bin/gmod_apollo_triggers.pl Installing /build/libchado-perl-1.31/debian/tmp/usr/bin/gmod_gff2biomart5.pl make[1]: Leaving directory '/build/libchado-perl-1.31' debian/rules override_dh_install make[1]: Entering directory '/build/libchado-perl-1.31' dh_install -O--buildsystem=perl_makemaker rm -f debian/libchado-perl/usr/share/gmod/chado/load/etc/load.conf sed -i 's/SQLFILE=\/.*\/libchado-perl/SQLFILE=/' debian/libchado-perl/usr/share/gmod/chado/conf/gmod-chado.conf sed -i 's/TMP=\/.*\/tmp/CONF=\/tmp/' debian/libchado-perl/usr/share/gmod/chado/conf/gmod.conf sed -i 's/CONF=.*\/conf/CONF=\/etc\/gmod/' debian/libchado-perl/usr/share/gmod/chado/conf/gmod.conf mv /build/libchado-perl-1.31/debian/libchado-perl/usr/share/gmod/chado/conf/* debian/libchado-perl/etc/gmod/ # Give exexution rights to perl scripts find debian/libchado-perl/ -name *.pl | xargs chmod 755 find debian/libchado-perl/ -name *.tmpl | xargs chmod 644 find debian/libchado-perl/ -name *.pm | xargs chmod 644 find debian/libchado-perl/ -name *.pod | xargs rm -f find debian/libchado-perl/ -name .packlist | xargs rm -f find debian/libchado-perl/ -name "*.sql" | xargs chmod a-x chmod 755 debian/libchado-perl/usr/share/gmod/chado/soi/t/t_soi_parse_intersect chmod 755 debian/libchado-perl/usr/share/gmod/chado/src/chado/modules/audit/make_audit_ddl mv debian/tmp/usr/bin/test* debian/libchado-perl/usr/share/gmod/chado/bin/ mv debian/tmp/usr/bin/gmod_chado* debian/libchado-perl/usr/share/gmod/chado/bin/ mv debian/tmp/usr/bin/config* debian/libchado-perl/usr/share/gmod/chado/bin/ mv debian/tmp/usr/bin/Auto* debian/libchado-perl/usr/share/gmod/chado/bin/ mv debian/tmp/usr/bin/* debian/chado-utils/usr/share/gmod/chado/bin/ mv debian/tmp/usr/lib/perl5/* debian/libchado-perl/usr/share/perl5/ rm -rf debian/libchado-perl/usr/lib/perl5 mv debian/tmp/usr/man/man3 debian/libchado-perl/usr/share/man mv debian/tmp/usr/man/man1 debian/chado-utils/usr/share/man cp debian/testdb.pl debian/libchado-perl/usr/share/gmod/chado/bin/ rm -rf debian/libchado-perl/usr/share/perl5/x86_64-linux-gnu-thread-multi # Needed for runtime configure rm -rf debian/libchado-perl/usr/share/gmod/chado/lib rm -rf debian/libchado-perl/usr/bin rm -rf debian/libchado-perl/usr/lib rm -rf debian/libchado-perl/usr/share/gmod/chado/load/logs rm -rf debian/libchado-perl/usr/share/gmod/chado/tmp # Remove not required man pages for user (also contains pod2man errors and missing what-is) rm -rf debian/libchado-perl/usr/share/man # Fix perl interpreter path for pl in `grep -Rl '#!/usr/bin/env[[:space:]]\+perl' debian/*/usr/*` ; do \ sed -i '1s?^#!/usr/bin/env[[:space:]]\+perl?#!/usr/bin/perl?' ${pl} ; \ done make[1]: Leaving directory '/build/libchado-perl-1.31' debian/rules override_dh_installdocs make[1]: Entering directory '/build/libchado-perl-1.31' dh_installdocs # remove installation doc find debian -name "INSTALL.Chado*" -delete make[1]: Leaving directory '/build/libchado-perl-1.31' dh_installchangelogs -O--buildsystem=perl_makemaker dh_installexamples -O--buildsystem=perl_makemaker dh_installman -O--buildsystem=perl_makemaker dh_installinit -O--buildsystem=perl_makemaker dh_lintian -O--buildsystem=perl_makemaker dh_perl -O--buildsystem=perl_makemaker dh_link -O--buildsystem=perl_makemaker dh_strip_nondeterminism -O--buildsystem=perl_makemaker dh_compress -O--buildsystem=perl_makemaker debian/rules override_dh_fixperms make[1]: Entering directory '/build/libchado-perl-1.31' dh_fixperms chmod 644 debian/libchado-perl/etc/gmod/gmod-chado.conf find debian -name create_so_bridge_command -exec chmod 644 \{\} \; find debian -name Skip_tables.pm -exec chmod 644 \{\} \; find debian -name "*.tt2" -exec chmod 644 \{\} \; find debian -name "*.tmpl" -exec chmod 644 \{\} \; make[1]: Leaving directory '/build/libchado-perl-1.31' dh_missing -O--buildsystem=perl_makemaker dh_installdeb -O--buildsystem=perl_makemaker dh_gencontrol -O--buildsystem=perl_makemaker dh_md5sums -O--buildsystem=perl_makemaker dh_builddeb -O--buildsystem=perl_makemaker dpkg-deb: building package 'chado-utils' in '../chado-utils_1.31-6_all.deb'. dpkg-deb: building package 'libchado-perl' in '../libchado-perl_1.31-6_all.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../libchado-perl_1.31-6_armhf.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/27395 and its subdirectories I: Current time: Thu Jul 29 09:09:59 -12 2021 I: pbuilder-time-stamp: 1627592999 Thu Jul 29 21:10:09 UTC 2021 I: 1st build successful. Starting 2nd build on remote node wbq0-armhf-rb.debian.net. Thu Jul 29 21:10:09 UTC 2021 I: Preparing to do remote build '2' on wbq0-armhf-rb.debian.net. Thu Jul 29 21:29:40 UTC 2021 I: Deleting $TMPDIR on wbq0-armhf-rb.debian.net. Thu Jul 29 21:29:43 UTC 2021 I: libchado-perl_1.31-6_armhf.changes: Format: 1.8 Date: Thu, 05 Dec 2019 08:35:16 +0000 Source: libchado-perl Binary: chado-utils libchado-perl Architecture: all Version: 1.31-6 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Olivier Sallou Description: chado-utils - tools to add/extract data from Chado libchado-perl - database schema and tools for genomic data Closes: 939832 Changes: libchado-perl (1.31-6) unstable; urgency=medium . [ Jelmer Vernooij ] * Trim trailing whitespace. * Use secure copyright file specification URI. [ Olivier Sallou ] * Fix postinstall script for case of USER env var not set (Closes: #939832) Checksums-Sha1: ab1184566cc8ce9fbeee64ab1034049643a36839 133640 chado-utils_1.31-6_all.deb 35459303be7221cc9300d2782ee1a40d6d26afba 2282372 libchado-perl_1.31-6_all.deb 7289ef9b3d9525377e9752f6e58a4757d5a046eb 10044 libchado-perl_1.31-6_armhf.buildinfo Checksums-Sha256: 8d48da2b8f792948c0e39f877c9edc533644348fb8e0d7f72f9a7b0b9e63314a 133640 chado-utils_1.31-6_all.deb 77a5ade350918afcbafd1bd8c6d60e5a6e9256e9f95e305096d009d851c7e539 2282372 libchado-perl_1.31-6_all.deb f3cac3b0640d08d68fe1c585d7869e4108001b47f099881c23c33a3f727b442a 10044 libchado-perl_1.31-6_armhf.buildinfo Files: 56c61a88e10bad60b06f5dea6684ed94 133640 perl optional chado-utils_1.31-6_all.deb 8e8f764960b74bd46f2d6df8ffe93d80 2282372 perl optional libchado-perl_1.31-6_all.deb a44efc38c7c55b6f880fcc5106a8f1c4 10044 perl optional libchado-perl_1.31-6_armhf.buildinfo Thu Jul 29 21:29:44 UTC 2021 I: diffoscope 177 will be used to compare the two builds: # Profiling output for: /usr/bin/diffoscope --html /srv/reproducible-results/rbuild-debian/tmp.CFRwEusaG2/libchado-perl_1.31-6.diffoscope.html --text /srv/reproducible-results/rbuild-debian/tmp.CFRwEusaG2/libchado-perl_1.31-6.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/tmp.CFRwEusaG2/libchado-perl_1.31-6.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/tmp.CFRwEusaG2/b1/libchado-perl_1.31-6_armhf.changes /srv/reproducible-results/rbuild-debian/tmp.CFRwEusaG2/b2/libchado-perl_1.31-6_armhf.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.321s) 0.321s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.043s) 0.043s 10 calls diffoscope.comparators.binary.FilesystemFile 0.000s 8 calls abc.DotChangesFile Thu Jul 29 21:29:46 UTC 2021 I: diffoscope 177 found no differences in the changes files, and a .buildinfo file also exists. Thu Jul 29 21:29:46 UTC 2021 I: libchado-perl from bullseye built successfully and reproducibly on armhf. Thu Jul 29 21:29:47 UTC 2021 I: Submitting .buildinfo files to external archives: Thu Jul 29 21:29:47 UTC 2021 I: Submitting 12K b1/libchado-perl_1.31-6_armhf.buildinfo.asc Thu Jul 29 21:29:48 UTC 2021 I: Submitting 12K b2/libchado-perl_1.31-6_armhf.buildinfo.asc Thu Jul 29 21:29:49 UTC 2021 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Thu Jul 29 21:29:49 UTC 2021 I: Done submitting .buildinfo files. Thu Jul 29 21:29:49 UTC 2021 I: Removing signed libchado-perl_1.31-6_armhf.buildinfo.asc files: removed './b1/libchado-perl_1.31-6_armhf.buildinfo.asc' removed './b2/libchado-perl_1.31-6_armhf.buildinfo.asc'