Mon Jul 12 05:00:31 UTC 2021 I: starting to build grabix/bullseye/armhf on jenkins on '2021-07-12 05:00' Mon Jul 12 05:00:31 UTC 2021 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/armhf_39/848/console.log Mon Jul 12 05:00:31 UTC 2021 I: Downloading source for bullseye/grabix=0.1.7-2 --2021-07-12 05:00:31-- http://cdn-fastly.deb.debian.org/debian/pool/main/g/grabix/grabix_0.1.7-2.dsc Connecting to 78.137.99.97:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2019 (2.0K) Saving to: ‘grabix_0.1.7-2.dsc’ 0K . 100% 192M=0s 2021-07-12 05:00:31 (192 MB/s) - ‘grabix_0.1.7-2.dsc’ saved [2019/2019] Mon Jul 12 05:00:31 UTC 2021 I: grabix_0.1.7-2.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: grabix Binary: grabix Architecture: any Version: 0.1.7-2 Maintainer: Debian Med Packaging Team Uploaders: Steffen Moeller Homepage: https://github.com/arq5x/grabix Standards-Version: 4.4.0 Vcs-Browser: https://salsa.debian.org/med-team/grabix Vcs-Git: https://salsa.debian.org/med-team/grabix.git Testsuite: autopkgtest Testsuite-Triggers: less, tabix, time Build-Depends: debhelper-compat (= 12), zlib1g-dev, python3, tabix, time, less Package-List: grabix deb science optional arch=any Checksums-Sha1: 801f2c288c7889d46f8a02f3d2b5a279a734e9c5 632258 grabix_0.1.7.orig.tar.gz 6a751de70c8dbb6dacc45f688bcda61a0abd1ab5 16956 grabix_0.1.7-2.debian.tar.xz Checksums-Sha256: d90735c55c0985a4d751858d7ce9e36ad534fff4103257e8e981e34d5c915b28 632258 grabix_0.1.7.orig.tar.gz 5048642a0a6caf06c509118390318ef8ccdaf493b4f49791ae939c80ebb443c7 16956 grabix_0.1.7-2.debian.tar.xz Files: abbac977d3c61b1892b30810d2f17281 632258 grabix_0.1.7.orig.tar.gz 3d19a4f739ef49b58cce58c58e74cc10 16956 grabix_0.1.7-2.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAl14o5YRHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtFO+A/8CIfF+HHOXqaUD/air2xcrcKK035+ZaxQ jmzJQ8V+J7GLlieaZxbfP6HOcBU0Cb1nNqqIXBmj1CzMv0BJysfuI8+uFkagr1Eu xYTzMSYflJi8N9u9YSFjTi6ex9UJs9GTFPx1T06klabXI7xoT7eOfNNT788viphs 50FEot2rQ2PoGetK62mT7yuG1c5cYfYqqT/5GnHb0GZogAkHby3+sZWUqJFm0ZKQ dLvnBzphjXj0BOjAAlSkp7428V32v865rZ76jnpPVT9+PCxM97UBGZxuwhrWpkN8 3A548QinhfQqZVt7BiTxVKYnp1YauLM8MzDaupXvQ5S6NxD0I1/d4Cg2Xk00DNI5 0bRTiGUVHcE4K+nXWkDmsk/yR9kzzJLNEKsx7j8+3B8/+LUpGocw0mTV7JoHdUhy wUfcAKjbwUu6Gg59+N4LNFmgTcIVkqcaWa/0qiL3v9ruE+/i/eYNshz0CtIwDkgK Ma/r/+dxiHrZdrxw06UZgj6EPUvHdXS+6IivI5xW14CqA2selqWbni2YUsRZkYxE 4exJ7+X7yTybaaiZeRG0MuMtVq5Ipezpj1pXmdosKPKgIwb5tlJOZwpcUOwHAJOI goatGkq4raC18W6Nl3CzgBXIyrIs6SWUX8gkjopPkjS7BenoG0FFk5Nx4vDA0G2S T57E6Cixs5E= =AvLy -----END PGP SIGNATURE----- Mon Jul 12 05:00:31 UTC 2021 I: Checking whether the package is not for us Mon Jul 12 05:00:31 UTC 2021 I: Starting 1st build on remote node virt64c-armhf-rb.debian.net. Mon Jul 12 05:00:31 UTC 2021 I: Preparing to do remote build '1' on virt64c-armhf-rb.debian.net. Mon Jul 12 05:03:14 UTC 2021 I: Deleting $TMPDIR on virt64c-armhf-rb.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Sun Jul 11 17:00:38 -12 2021 I: pbuilder-time-stamp: 1626066038 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bullseye-reproducible-base.tgz] I: copying local configuration I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [grabix_0.1.7-2.dsc] I: copying [./grabix_0.1.7.orig.tar.gz] I: copying [./grabix_0.1.7-2.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/tmp/dpkg-verify-sig.b5rrCKMw/trustedkeys.kbx': General error gpgv: Signature made Tue Sep 10 19:34:46 2019 -12 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./grabix_0.1.7-2.dsc dpkg-source: info: extracting grabix in grabix-0.1.7 dpkg-source: info: unpacking grabix_0.1.7.orig.tar.gz dpkg-source: info: unpacking grabix_0.1.7-2.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying fix_assignment_of_char_to_pointer.patch dpkg-source: info: applying Hardening.patch dpkg-source: info: applying warnings.patch dpkg-source: info: applying introduceLTO.patch dpkg-source: info: applying fix_test.patch dpkg-source: info: applying 2to3.patch I: using fakeroot in build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/27559/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='armhf' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=3' DISTRIBUTION='' HOME='/root' HOST_ARCH='armhf' IFS=' ' INVOCATION_ID='4460c99d88654080a01b55e29ab5466d' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='27559' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.upYGGxNma7/pbuilderrc_ec4X --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.upYGGxNma7/b1 --logfile b1/build.log grabix_0.1.7-2.dsc' SUDO_GID='113' SUDO_UID='107' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://10.0.0.15:8000/' I: uname -a Linux virt64c 5.10.0-7-arm64 #1 SMP Debian 5.10.40-1 (2021-05-28) aarch64 GNU/Linux I: ls -l /bin total 3580 -rwxr-xr-x 1 root root 816764 Jun 21 14:26 bash -rwxr-xr-x 3 root root 26052 Jul 20 2020 bunzip2 -rwxr-xr-x 3 root root 26052 Jul 20 2020 bzcat lrwxrwxrwx 1 root root 6 Jul 20 2020 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2225 Jul 20 2020 bzdiff lrwxrwxrwx 1 root root 6 Jul 20 2020 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4877 Sep 4 2019 bzexe lrwxrwxrwx 1 root root 6 Jul 20 2020 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3775 Jul 20 2020 bzgrep -rwxr-xr-x 3 root root 26052 Jul 20 2020 bzip2 -rwxr-xr-x 1 root root 9636 Jul 20 2020 bzip2recover lrwxrwxrwx 1 root root 6 Jul 20 2020 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Jul 20 2020 bzmore -rwxr-xr-x 1 root root 26668 Sep 22 2020 cat -rwxr-xr-x 1 root root 43104 Sep 22 2020 chgrp -rwxr-xr-x 1 root root 38984 Sep 22 2020 chmod -rwxr-xr-x 1 root root 43112 Sep 22 2020 chown -rwxr-xr-x 1 root root 92616 Sep 22 2020 cp -rwxr-xr-x 1 root root 75524 Dec 10 2020 dash -rwxr-xr-x 1 root root 75880 Sep 22 2020 date -rwxr-xr-x 1 root root 55436 Sep 22 2020 dd -rwxr-xr-x 1 root root 59912 Sep 22 2020 df -rwxr-xr-x 1 root root 96764 Sep 22 2020 dir -rwxr-xr-x 1 root root 55012 Feb 7 02:38 dmesg lrwxrwxrwx 1 root root 8 Nov 6 2019 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Nov 6 2019 domainname -> hostname -rwxr-xr-x 1 root root 22508 Sep 22 2020 echo -rwxr-xr-x 1 root root 28 Nov 9 2020 egrep -rwxr-xr-x 1 root root 22496 Sep 22 2020 false -rwxr-xr-x 1 root root 28 Nov 9 2020 fgrep -rwxr-xr-x 1 root root 47492 Feb 7 02:38 findmnt -rwsr-xr-x 1 root root 26076 Feb 26 04:12 fusermount -rwxr-xr-x 1 root root 124508 Nov 9 2020 grep -rwxr-xr-x 2 root root 2346 Mar 2 11:30 gunzip -rwxr-xr-x 1 root root 6376 Mar 2 11:30 gzexe -rwxr-xr-x 1 root root 64212 Mar 2 11:30 gzip -rwxr-xr-x 1 root root 13784 Nov 6 2019 hostname -rwxr-xr-x 1 root root 43180 Sep 22 2020 ln -rwxr-xr-x 1 root root 35068 Feb 7 2020 login -rwxr-xr-x 1 root root 96764 Sep 22 2020 ls -rwxr-xr-x 1 root root 99940 Feb 7 02:38 lsblk -rwxr-xr-x 1 root root 51408 Sep 22 2020 mkdir -rwxr-xr-x 1 root root 43184 Sep 22 2020 mknod -rwxr-xr-x 1 root root 30780 Sep 22 2020 mktemp -rwxr-xr-x 1 root root 34408 Feb 7 02:38 more -rwsr-xr-x 1 root root 34400 Feb 7 02:38 mount -rwxr-xr-x 1 root root 9824 Feb 7 02:38 mountpoint -rwxr-xr-x 1 root root 88524 Sep 22 2020 mv lrwxrwxrwx 1 root root 8 Nov 6 2019 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Apr 18 03:38 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 26652 Sep 22 2020 pwd lrwxrwxrwx 1 root root 4 Jun 21 14:26 rbash -> bash -rwxr-xr-x 1 root root 30740 Sep 22 2020 readlink -rwxr-xr-x 1 root root 43104 Sep 22 2020 rm -rwxr-xr-x 1 root root 30732 Sep 22 2020 rmdir -rwxr-xr-x 1 root root 14144 Sep 27 2020 run-parts -rwxr-xr-x 1 root root 76012 Dec 22 2018 sed lrwxrwxrwx 1 root root 4 Jul 9 21:26 sh -> dash -rwxr-xr-x 1 root root 22532 Sep 22 2020 sleep -rwxr-xr-x 1 root root 55360 Sep 22 2020 stty -rwsr-xr-x 1 root root 46704 Feb 7 02:38 su -rwxr-xr-x 1 root root 22532 Sep 22 2020 sync -rwxr-xr-x 1 root root 340872 Feb 16 21:55 tar -rwxr-xr-x 1 root root 9808 Sep 27 2020 tempfile -rwxr-xr-x 1 root root 67696 Sep 22 2020 touch -rwxr-xr-x 1 root root 22496 Sep 22 2020 true -rwxr-xr-x 1 root root 9636 Feb 26 04:12 ulockmgr_server -rwsr-xr-x 1 root root 22108 Feb 7 02:38 umount -rwxr-xr-x 1 root root 22520 Sep 22 2020 uname -rwxr-xr-x 2 root root 2346 Mar 2 11:30 uncompress -rwxr-xr-x 1 root root 96764 Sep 22 2020 vdir -rwxr-xr-x 1 root root 38512 Feb 7 02:38 wdctl lrwxrwxrwx 1 root root 8 Nov 6 2019 ypdomainname -> hostname -rwxr-xr-x 1 root root 1984 Mar 2 11:30 zcat -rwxr-xr-x 1 root root 1678 Mar 2 11:30 zcmp -rwxr-xr-x 1 root root 5880 Mar 2 11:30 zdiff -rwxr-xr-x 1 root root 29 Mar 2 11:30 zegrep -rwxr-xr-x 1 root root 29 Mar 2 11:30 zfgrep -rwxr-xr-x 1 root root 2081 Mar 2 11:30 zforce -rwxr-xr-x 1 root root 7585 Mar 2 11:30 zgrep -rwxr-xr-x 1 root root 2206 Mar 2 11:30 zless -rwxr-xr-x 1 root root 1842 Mar 2 11:30 zmore -rwxr-xr-x 1 root root 4553 Mar 2 11:30 znew I: user script /srv/workspace/pbuilder/27559/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: armhf Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 12), zlib1g-dev, python3, tabix, time, less dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19398 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 12); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on zlib1g-dev; however: Package zlib1g-dev is not installed. pbuilder-satisfydepends-dummy depends on python3; however: Package python3 is not installed. pbuilder-satisfydepends-dummy depends on tabix; however: Package tabix is not installed. pbuilder-satisfydepends-dummy depends on time; however: Package time is not installed. pbuilder-satisfydepends-dummy depends on less; however: Package less is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} less{a} libarchive-zip-perl{a} libdebhelper-perl{a} libdeflate0{a} libelf1{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libicu67{a} libmagic-mgc{a} libmagic1{a} libmpdec3{a} libpipeline1{a} libpython3-stdlib{a} libpython3.9-minimal{a} libpython3.9-stdlib{a} libreadline8{a} libsigsegv2{a} libsub-override-perl{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} media-types{a} po-debconf{a} python3{a} python3-minimal{a} python3.9{a} python3.9-minimal{a} readline-common{a} sensible-utils{a} tabix{a} time{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 48 newly installed, 0 to remove and 0 not upgraded. Need to get 23.4 MB of archives. After unpacking 82.6 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian bullseye/main armhf bsdextrautils armhf 2.36.1-7 [138 kB] Get: 2 http://deb.debian.org/debian bullseye/main armhf libuchardet0 armhf 0.0.7-1 [65.0 kB] Get: 3 http://deb.debian.org/debian bullseye/main armhf groff-base armhf 1.22.4-6 [847 kB] Get: 4 http://deb.debian.org/debian bullseye/main armhf libpipeline1 armhf 1.5.3-1 [30.1 kB] Get: 5 http://deb.debian.org/debian bullseye/main armhf man-db armhf 2.9.4-2 [1319 kB] Get: 6 http://deb.debian.org/debian bullseye/main armhf libpython3.9-minimal armhf 3.9.2-1 [790 kB] Get: 7 http://deb.debian.org/debian bullseye/main armhf libexpat1 armhf 2.2.10-2 [76.3 kB] Get: 8 http://deb.debian.org/debian bullseye/main armhf python3.9-minimal armhf 3.9.2-1 [1630 kB] Get: 9 http://deb.debian.org/debian bullseye/main armhf python3-minimal armhf 3.9.2-3 [38.2 kB] Get: 10 http://deb.debian.org/debian bullseye/main armhf media-types all 4.0.0 [30.3 kB] Get: 11 http://deb.debian.org/debian bullseye/main armhf libmpdec3 armhf 2.5.1-1 [74.9 kB] Get: 12 http://deb.debian.org/debian bullseye/main armhf readline-common all 8.1-1 [73.7 kB] Get: 13 http://deb.debian.org/debian bullseye/main armhf libreadline8 armhf 8.1-1 [147 kB] Get: 14 http://deb.debian.org/debian bullseye/main armhf libpython3.9-stdlib armhf 3.9.2-1 [1608 kB] Get: 15 http://deb.debian.org/debian bullseye/main armhf python3.9 armhf 3.9.2-1 [466 kB] Get: 16 http://deb.debian.org/debian bullseye/main armhf libpython3-stdlib armhf 3.9.2-3 [21.4 kB] Get: 17 http://deb.debian.org/debian bullseye/main armhf python3 armhf 3.9.2-3 [37.9 kB] Get: 18 http://deb.debian.org/debian bullseye/main armhf less armhf 551-2 [126 kB] Get: 19 http://deb.debian.org/debian bullseye/main armhf sensible-utils all 0.0.14 [14.8 kB] Get: 20 http://deb.debian.org/debian bullseye/main armhf libmagic-mgc armhf 1:5.39-3 [273 kB] Get: 21 http://deb.debian.org/debian bullseye/main armhf libmagic1 armhf 1:5.39-3 [117 kB] Get: 22 http://deb.debian.org/debian bullseye/main armhf file armhf 1:5.39-3 [68.1 kB] Get: 23 http://deb.debian.org/debian bullseye/main armhf gettext-base armhf 0.21-4 [171 kB] Get: 24 http://deb.debian.org/debian bullseye/main armhf libsigsegv2 armhf 2.13-1 [34.0 kB] Get: 25 http://deb.debian.org/debian bullseye/main armhf m4 armhf 1.4.18-5 [192 kB] Get: 26 http://deb.debian.org/debian bullseye/main armhf autoconf all 2.69-14 [313 kB] Get: 27 http://deb.debian.org/debian bullseye/main armhf autotools-dev all 20180224.1+nmu1 [77.1 kB] Get: 28 http://deb.debian.org/debian bullseye/main armhf automake all 1:1.16.3-2 [814 kB] Get: 29 http://deb.debian.org/debian bullseye/main armhf autopoint all 0.21-4 [510 kB] Get: 30 http://deb.debian.org/debian bullseye/main armhf libdebhelper-perl all 13.3.4 [189 kB] Get: 31 http://deb.debian.org/debian bullseye/main armhf libtool all 2.4.6-15 [513 kB] Get: 32 http://deb.debian.org/debian bullseye/main armhf dh-autoreconf all 20 [17.1 kB] Get: 33 http://deb.debian.org/debian bullseye/main armhf libarchive-zip-perl all 1.68-1 [104 kB] Get: 34 http://deb.debian.org/debian bullseye/main armhf libsub-override-perl all 0.09-2 [10.2 kB] Get: 35 http://deb.debian.org/debian bullseye/main armhf libfile-stripnondeterminism-perl all 1.11.0-1 [25.6 kB] Get: 36 http://deb.debian.org/debian bullseye/main armhf dh-strip-nondeterminism all 1.11.0-1 [15.3 kB] Get: 37 http://deb.debian.org/debian bullseye/main armhf libelf1 armhf 0.183-1 [161 kB] Get: 38 http://deb.debian.org/debian bullseye/main armhf dwz armhf 0.13+20210201-1 [179 kB] Get: 39 http://deb.debian.org/debian bullseye/main armhf libicu67 armhf 67.1-7 [8319 kB] Get: 40 http://deb.debian.org/debian bullseye/main armhf libxml2 armhf 2.9.10+dfsg-6.7 [602 kB] Get: 41 http://deb.debian.org/debian bullseye/main armhf gettext armhf 0.21-4 [1243 kB] Get: 42 http://deb.debian.org/debian bullseye/main armhf intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get: 43 http://deb.debian.org/debian bullseye/main armhf po-debconf all 1.0.21+nmu1 [248 kB] Get: 44 http://deb.debian.org/debian bullseye/main armhf debhelper all 13.3.4 [1049 kB] Get: 45 http://deb.debian.org/debian bullseye/main armhf libdeflate0 armhf 1.7-1 [43.1 kB] Get: 46 http://deb.debian.org/debian bullseye/main armhf tabix armhf 1.11-4 [306 kB] Get: 47 http://deb.debian.org/debian bullseye/main armhf time armhf 1.9-0.1 [50.8 kB] Get: 48 http://deb.debian.org/debian bullseye/main armhf zlib1g-dev armhf 1:1.2.11.dfsg-2 [185 kB] Fetched 23.4 MB in 2s (9785 kB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package bsdextrautils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19398 files and directories currently installed.) Preparing to unpack .../0-bsdextrautils_2.36.1-7_armhf.deb ... Unpacking bsdextrautils (2.36.1-7) ... Selecting previously unselected package libuchardet0:armhf. Preparing to unpack .../1-libuchardet0_0.0.7-1_armhf.deb ... Unpacking libuchardet0:armhf (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../2-groff-base_1.22.4-6_armhf.deb ... Unpacking groff-base (1.22.4-6) ... Selecting previously unselected package libpipeline1:armhf. Preparing to unpack .../3-libpipeline1_1.5.3-1_armhf.deb ... Unpacking libpipeline1:armhf (1.5.3-1) ... Selecting previously unselected package man-db. Preparing to unpack .../4-man-db_2.9.4-2_armhf.deb ... Unpacking man-db (2.9.4-2) ... Selecting previously unselected package libpython3.9-minimal:armhf. Preparing to unpack .../5-libpython3.9-minimal_3.9.2-1_armhf.deb ... Unpacking libpython3.9-minimal:armhf (3.9.2-1) ... Selecting previously unselected package libexpat1:armhf. Preparing to unpack .../6-libexpat1_2.2.10-2_armhf.deb ... Unpacking libexpat1:armhf (2.2.10-2) ... Selecting previously unselected package python3.9-minimal. Preparing to unpack .../7-python3.9-minimal_3.9.2-1_armhf.deb ... Unpacking python3.9-minimal (3.9.2-1) ... Setting up libpython3.9-minimal:armhf (3.9.2-1) ... Setting up libexpat1:armhf (2.2.10-2) ... Setting up python3.9-minimal (3.9.2-1) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20265 files and directories currently installed.) Preparing to unpack .../0-python3-minimal_3.9.2-3_armhf.deb ... Unpacking python3-minimal (3.9.2-3) ... Selecting previously unselected package media-types. Preparing to unpack .../1-media-types_4.0.0_all.deb ... Unpacking media-types (4.0.0) ... Selecting previously unselected package libmpdec3:armhf. 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Setting up dh-strip-nondeterminism (1.11.0-1) ... Setting up dwz (0.13+20210201-1) ... Setting up groff-base (1.22.4-6) ... Setting up libpython3.9-stdlib:armhf (3.9.2-1) ... Setting up libpython3-stdlib:armhf (3.9.2-3) ... Setting up automake (1:1.16.3-2) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.9.4-2) ... Not building database; man-db/auto-update is not 'true'. Setting up dh-autoreconf (20) ... Setting up python3.9 (3.9.2-1) ... Setting up debhelper (13.3.4) ... Setting up python3 (3.9.2-3) ... Processing triggers for libc-bin (2.31-12) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps Reading package lists... Building dependency tree... Reading state information... fakeroot is already the newest version (1.25.3-1.1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package I: Running cd /build/grabix-0.1.7/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../grabix_0.1.7-2_source.changes dpkg-buildpackage: info: source package grabix dpkg-buildpackage: info: source version 0.1.7-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf fakeroot debian/rules clean dh clean dh_auto_clean make -j3 clean make[1]: Entering directory '/build/grabix-0.1.7' rm -f grabix make[1]: Leaving directory '/build/grabix-0.1.7' dh_clean debian/rules build dh build dh_update_autotools_config dh_autoreconf dh_auto_configure dh_auto_build make -j3 "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/grabix-0.1.7' gcc -g -O2 -fdebug-prefix-map=/build/grabix-0.1.7=. -fstack-protector-strong -Wformat -Werror=format-security -Wall -flto -o grabix grabix_main.cpp grabix.cpp bgzf.c -Wl,-z,relro -Wl,-z,now -lstdc++ -lz -Wl,-flto make[1]: Leaving directory '/build/grabix-0.1.7' debian/rules override_dh_auto_test make[1]: Entering directory '/build/grabix-0.1.7' PATH=/build/grabix-0.1.7:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games sh debian/testdata/test.sh indexing 0.48user 0.00system 0:00.50elapsed 97%CPU (0avgtext+0avgdata 2512maxresident)k 0inputs+8outputs (0major+131minor)pagefaults 0swaps indexed checking indexing at bounds: ..............................................................................................Traceback (most recent call last): File "/build/grabix-0.1.7/tests/test-fastq.py", line 30, in check(f, i) File "/build/grabix-0.1.7/tests/test-fastq.py", line 18, in check assert exp == obs, (exp, obs) AssertionError: ([b'@read_5001'], [b'@read_1']) FAIL last record OK ./debian/testdata/test.PLs.vcf OK ./debian/testdata/test.exac.vcf OK ./debian/testdata/test.clinvar.vcf OK ./debian/testdata/test.cosmic.vcf OK ./debian/testdata/test.fusions.vcf make[1]: Leaving directory '/build/grabix-0.1.7' create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary dh binary dh_testroot dh_prep dh_auto_install dh_install dh_installdocs dh_installchangelogs dh_installexamples dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_dwz dh_strip dh_makeshlibs dh_shlibdeps dpkg-shlibdeps: warning: debian/grabix/usr/bin/grabix contains an unresolvable reference to symbol __aeabi_atexit@GLIBC_2.4: it's probably a plugin dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'grabix-dbgsym' in '../grabix-dbgsym_0.1.7-2_armhf.deb'. dpkg-deb: building package 'grabix' in '../grabix_0.1.7-2_armhf.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../grabix_0.1.7-2_armhf.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/27559 and its subdirectories I: Current time: Sun Jul 11 17:03:09 -12 2021 I: pbuilder-time-stamp: 1626066189 Mon Jul 12 05:03:17 UTC 2021 I: 1st build successful. Starting 2nd build on remote node wbq0-armhf-rb.debian.net. Mon Jul 12 05:03:17 UTC 2021 I: Preparing to do remote build '2' on wbq0-armhf-rb.debian.net. Mon Jul 12 05:09:12 UTC 2021 I: Deleting $TMPDIR on wbq0-armhf-rb.debian.net. Mon Jul 12 05:09:14 UTC 2021 I: grabix_0.1.7-2_armhf.changes: Format: 1.8 Date: Wed, 11 Sep 2019 09:09:40 +0200 Source: grabix Binary: grabix grabix-dbgsym Architecture: armhf Version: 0.1.7-2 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: grabix - wee tool for random access into BGZF files Closes: 936648 Changes: grabix (0.1.7-2) unstable; urgency=medium . * Team upload. * Use 2to3 to port to Python3 Closes: #936648 * debhelper-compat 12 * Standards-Version: 4.4.0 Checksums-Sha1: 47848051fb6de2dfc08ce8f41623fd594913c40d 68944 grabix-dbgsym_0.1.7-2_armhf.deb 49d4824fae7c776fd60fb940196293a0a99895fb 5277 grabix_0.1.7-2_armhf.buildinfo 6503fba1b3c3382c7b14f90b4fa57d4f948720d4 15188 grabix_0.1.7-2_armhf.deb Checksums-Sha256: 4a1dc8bc02ba55837425ec4839746000ad73316f8639f49cd454e38c9f303015 68944 grabix-dbgsym_0.1.7-2_armhf.deb 4e1b23c10e2f9bf54f30d6c7b301337c75048ce3ba8f31bc3cf790c51c2a9f10 5277 grabix_0.1.7-2_armhf.buildinfo 5712a48ea265feb980b7053d23c219b303a27bcc04c6104858c1a1d69e290608 15188 grabix_0.1.7-2_armhf.deb Files: f1f3bcdb16346e838884126d6a1d5899 68944 debug optional grabix-dbgsym_0.1.7-2_armhf.deb d038621a2490c2657ee6f2c76b759e4c 5277 science optional grabix_0.1.7-2_armhf.buildinfo fc0104cff13625f7dd0eba5c9661b877 15188 science optional grabix_0.1.7-2_armhf.deb Mon Jul 12 05:09:15 UTC 2021 I: diffoscope 177 will be used to compare the two builds: # Profiling output for: /usr/bin/diffoscope --html /srv/reproducible-results/rbuild-debian/tmp.upYGGxNma7/grabix_0.1.7-2.diffoscope.html --text /srv/reproducible-results/rbuild-debian/tmp.upYGGxNma7/grabix_0.1.7-2.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/tmp.upYGGxNma7/grabix_0.1.7-2.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/tmp.upYGGxNma7/b1/grabix_0.1.7-2_armhf.changes /srv/reproducible-results/rbuild-debian/tmp.upYGGxNma7/b2/grabix_0.1.7-2_armhf.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.239s) 0.239s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.018s) 0.018s 10 calls diffoscope.comparators.binary.FilesystemFile 0.000s 8 calls abc.DotChangesFile Mon Jul 12 05:09:17 UTC 2021 I: diffoscope 177 found no differences in the changes files, and a .buildinfo file also exists. Mon Jul 12 05:09:17 UTC 2021 I: grabix from bullseye built successfully and reproducibly on armhf. Mon Jul 12 05:09:18 UTC 2021 I: Submitting .buildinfo files to external archives: Mon Jul 12 05:09:18 UTC 2021 I: Submitting 8.0K b1/grabix_0.1.7-2_armhf.buildinfo.asc Mon Jul 12 05:09:19 UTC 2021 I: Submitting 8.0K b2/grabix_0.1.7-2_armhf.buildinfo.asc Mon Jul 12 05:09:20 UTC 2021 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Mon Jul 12 05:09:20 UTC 2021 I: Done submitting .buildinfo files. Mon Jul 12 05:09:20 UTC 2021 I: Removing signed grabix_0.1.7-2_armhf.buildinfo.asc files: removed './b1/grabix_0.1.7-2_armhf.buildinfo.asc' removed './b2/grabix_0.1.7-2_armhf.buildinfo.asc'