Sat Sep 11 18:52:07 UTC 2021 I: starting to build aegean/bullseye/armhf on jenkins on '2021-09-11 18:51' Sat Sep 11 18:52:07 UTC 2021 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/armhf_21/3462/console.log Sat Sep 11 18:52:07 UTC 2021 I: Downloading source for bullseye/aegean=0.16.0+dfsg-2 --2021-09-11 18:52:07-- http://cdn-fastly.deb.debian.org/debian/pool/main/a/aegean/aegean_0.16.0%2bdfsg-2.dsc Connecting to 78.137.99.97:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2235 (2.2K) Saving to: ‘aegean_0.16.0+dfsg-2.dsc’ 0K .. 100% 71.3M=0s 2021-09-11 18:52:07 (71.3 MB/s) - ‘aegean_0.16.0+dfsg-2.dsc’ saved [2235/2235] Sat Sep 11 18:52:08 UTC 2021 I: aegean_0.16.0+dfsg-2.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: aegean Binary: aegean Architecture: amd64 arm64 armel armhf i386 mipsel powerpc ppc64el s390x hurd-i386 kfreebsd-amd64 kfreebsd-i386 ppc64 x32 Version: 0.16.0+dfsg-2 Maintainer: Debian Med Packaging Team Uploaders: Sascha Steinbiss Homepage: https://standage.github.io/AEGeAn Standards-Version: 4.4.0 Vcs-Browser: https://salsa.debian.org/med-team/aegean Vcs-Git: https://salsa.debian.org/med-team/aegean.git Testsuite: autopkgtest Testsuite-Triggers: python3 Build-Depends: debhelper-compat (= 12), libcairo2-dev, libgenometools0-dev, python3 Package-List: aegean deb science optional arch=amd64,arm64,armel,armhf,i386,mipsel,powerpc,ppc64el,s390x,hurd-i386,kfreebsd-amd64,kfreebsd-i386,ppc64,x32 Checksums-Sha1: 29ba01d6ae8ec73e90a3dcea4cc1496dbe332ad1 534860 aegean_0.16.0+dfsg.orig.tar.xz b3e13537647aeab12097a86ebb72deea597400b1 9340 aegean_0.16.0+dfsg-2.debian.tar.xz Checksums-Sha256: 8d60ba13c60d404d04746c2f1253a712392f8368806d93f01f8e6edb0ec9c039 534860 aegean_0.16.0+dfsg.orig.tar.xz 0e34665ea4de29477a3e7212a6d3cbc418ef34e4dd67299f93ced369dcc65a4b 9340 aegean_0.16.0+dfsg-2.debian.tar.xz Files: 8df4e46ed3a5e4a5e1a5d863e03ba3c9 534860 aegean_0.16.0+dfsg.orig.tar.xz 4a741ab5bbf22b22e4c302c2d6ac55df 9340 aegean_0.16.0+dfsg-2.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQIzBAEBCgAdFiEEWzS6WqtVB+kDQm6F6NN64vCfSHIFAl12oFoACgkQ6NN64vCf SHL3uBAAnZaA4YwqAql0d1viSxKiUx4hAy0MpR8xa3Sx/Bo02pvjnjiGbsl7tkZb xO+fZJlSplbgfAxuB6QUmUZtMoh470mXc2xLNXmhagHSWlRnnPkJ+p+jck0I1BIE 3xEmrxcd3GVfQo4IYiNhft106anXpC3Se14ltYBe1hohJjCNa5b0tsS8GmW5gtT3 bly0gJRx8H464fu52M1GjuXW3izwwJdyGhYQWnnPa8mrunT2TYpW5j96suQSd8GH KG9vR//gsCCM2PTpqbXbTZ1KOpYV/UdsfvqzkE4Fwvmsg5WJc19vcshNiO73gKmM yuvJqW/xPkgVxezbEGRSz6zzgvDW0rD+hofT29HMggfnI6BER4kPyx4Be0WFFwUO CJ075pHiRtLu1uTQ6VVgDrNe8ZQceKtk+en5cQMjxGLF1OuEZEm5sgKdVGDVWhxj TBjOzVDT82yzpIWnSsFB7iHqla5VzirPSBYe27QkSwxTSz5qOAT9qzVvnsgnvOb5 ToTyh/wT43qqh5K5GmQKN9cImz5C67unvJzbLGU6ZxJCpxAgyu7wEvXp9+DGioEW 5WHA1e593hWxq+VFZsB2XhvuaezvsxB0AkzRAYJpH6CuryVP67YxxsHnzBVCN1mb 7J/jEafhEoa97fDzQbz0aGkr766Knp68cKTDUxBpp9Eqqo9dBZc= =El/3 -----END PGP SIGNATURE----- Sat Sep 11 18:52:08 UTC 2021 I: Checking whether the package is not for us Sat Sep 11 18:52:08 UTC 2021 I: Starting 1st build on remote node cbxi4a-armhf-rb.debian.net. Sat Sep 11 18:52:08 UTC 2021 I: Preparing to do remote build '1' on cbxi4a-armhf-rb.debian.net. Sat Sep 11 19:01:11 UTC 2021 I: Deleting $TMPDIR on cbxi4a-armhf-rb.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Sat Sep 11 06:52:17 -12 2021 I: pbuilder-time-stamp: 1631386337 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bullseye-reproducible-base.tgz] I: copying local configuration I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [aegean_0.16.0+dfsg-2.dsc] I: copying [./aegean_0.16.0+dfsg.orig.tar.xz] I: copying [./aegean_0.16.0+dfsg-2.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/tmp/dpkg-verify-sig.Vhi43taf/trustedkeys.kbx': General error gpgv: Signature made Mon Sep 9 06:56:26 2019 -12 gpgv: using RSA key 5B34BA5AAB5507E903426E85E8D37AE2F09F4872 gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./aegean_0.16.0+dfsg-2.dsc dpkg-source: info: extracting aegean in aegean-0.16.0+dfsg dpkg-source: info: unpacking aegean_0.16.0+dfsg.orig.tar.xz dpkg-source: info: unpacking aegean_0.16.0+dfsg-2.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying add_hardening dpkg-source: info: applying fix_m64_on_some_archs dpkg-source: info: applying remove_license dpkg-source: info: applying adjust_datapath dpkg-source: info: applying follow_links dpkg-source: info: applying includepaths dpkg-source: info: applying 2to3.patch I: using fakeroot in build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/13225/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='armhf' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=3' DISTRIBUTION='' HOME='/root' HOST_ARCH='armhf' IFS=' ' INVOCATION_ID='f0fee7b7127a418782156a85b80a490e' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='13225' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.LHNOotyUy4/pbuilderrc_IPzt --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.LHNOotyUy4/b1 --logfile b1/build.log aegean_0.16.0+dfsg-2.dsc' SUDO_GID='113' SUDO_UID='107' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://10.0.0.15:8000/' I: uname -a Linux cbxi4a 5.10.0-8-armmp #1 SMP Debian 5.10.46-4 (2021-08-03) armv7l GNU/Linux I: ls -l /bin total 3580 -rwxr-xr-x 1 root root 816764 Aug 4 08:25 bash -rwxr-xr-x 3 root root 26052 Jul 20 2020 bunzip2 -rwxr-xr-x 3 root root 26052 Jul 20 2020 bzcat lrwxrwxrwx 1 root root 6 Jul 20 2020 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2225 Jul 20 2020 bzdiff lrwxrwxrwx 1 root root 6 Jul 20 2020 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4877 Sep 4 2019 bzexe lrwxrwxrwx 1 root root 6 Jul 20 2020 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3775 Jul 20 2020 bzgrep -rwxr-xr-x 3 root root 26052 Jul 20 2020 bzip2 -rwxr-xr-x 1 root root 9636 Jul 20 2020 bzip2recover lrwxrwxrwx 1 root root 6 Jul 20 2020 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Jul 20 2020 bzmore -rwxr-xr-x 1 root root 26668 Sep 22 2020 cat -rwxr-xr-x 1 root root 43104 Sep 22 2020 chgrp -rwxr-xr-x 1 root root 38984 Sep 22 2020 chmod -rwxr-xr-x 1 root root 43112 Sep 22 2020 chown -rwxr-xr-x 1 root root 92616 Sep 22 2020 cp -rwxr-xr-x 1 root root 75524 Dec 10 2020 dash -rwxr-xr-x 1 root root 75880 Sep 22 2020 date -rwxr-xr-x 1 root root 55436 Sep 22 2020 dd -rwxr-xr-x 1 root root 59912 Sep 22 2020 df -rwxr-xr-x 1 root root 96764 Sep 22 2020 dir -rwxr-xr-x 1 root root 55012 Jul 28 07:09 dmesg lrwxrwxrwx 1 root root 8 Nov 6 2019 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Nov 6 2019 domainname -> hostname -rwxr-xr-x 1 root root 22508 Sep 22 2020 echo -rwxr-xr-x 1 root root 28 Nov 9 2020 egrep -rwxr-xr-x 1 root root 22496 Sep 22 2020 false -rwxr-xr-x 1 root root 28 Nov 9 2020 fgrep -rwxr-xr-x 1 root root 47492 Jul 28 07:09 findmnt -rwsr-xr-x 1 root root 26076 Feb 26 2021 fusermount -rwxr-xr-x 1 root root 124508 Nov 9 2020 grep -rwxr-xr-x 2 root root 2346 Mar 2 2021 gunzip -rwxr-xr-x 1 root root 6376 Mar 2 2021 gzexe -rwxr-xr-x 1 root root 64212 Mar 2 2021 gzip -rwxr-xr-x 1 root root 13784 Nov 6 2019 hostname -rwxr-xr-x 1 root root 43180 Sep 22 2020 ln -rwxr-xr-x 1 root root 35068 Feb 7 2020 login -rwxr-xr-x 1 root root 96764 Sep 22 2020 ls -rwxr-xr-x 1 root root 99940 Jul 28 07:09 lsblk -rwxr-xr-x 1 root root 51408 Sep 22 2020 mkdir -rwxr-xr-x 1 root root 43184 Sep 22 2020 mknod -rwxr-xr-x 1 root root 30780 Sep 22 2020 mktemp -rwxr-xr-x 1 root root 34408 Jul 28 07:09 more -rwsr-xr-x 1 root root 34400 Jul 28 07:09 mount -rwxr-xr-x 1 root root 9824 Jul 28 07:09 mountpoint -rwxr-xr-x 1 root root 88524 Sep 22 2020 mv lrwxrwxrwx 1 root root 8 Nov 6 2019 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Apr 18 03:38 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 26652 Sep 22 2020 pwd lrwxrwxrwx 1 root root 4 Aug 4 08:25 rbash -> bash -rwxr-xr-x 1 root root 30740 Sep 22 2020 readlink -rwxr-xr-x 1 root root 43104 Sep 22 2020 rm -rwxr-xr-x 1 root root 30732 Sep 22 2020 rmdir -rwxr-xr-x 1 root root 14144 Sep 27 2020 run-parts -rwxr-xr-x 1 root root 76012 Dec 22 2018 sed lrwxrwxrwx 1 root root 4 Sep 6 21:28 sh -> dash -rwxr-xr-x 1 root root 22532 Sep 22 2020 sleep -rwxr-xr-x 1 root root 55360 Sep 22 2020 stty -rwsr-xr-x 1 root root 46704 Jul 28 07:09 su -rwxr-xr-x 1 root root 22532 Sep 22 2020 sync -rwxr-xr-x 1 root root 340872 Feb 16 2021 tar -rwxr-xr-x 1 root root 9808 Sep 27 2020 tempfile -rwxr-xr-x 1 root root 67696 Sep 22 2020 touch -rwxr-xr-x 1 root root 22496 Sep 22 2020 true -rwxr-xr-x 1 root root 9636 Feb 26 2021 ulockmgr_server -rwsr-xr-x 1 root root 22108 Jul 28 07:09 umount -rwxr-xr-x 1 root root 22520 Sep 22 2020 uname -rwxr-xr-x 2 root root 2346 Mar 2 2021 uncompress -rwxr-xr-x 1 root root 96764 Sep 22 2020 vdir -rwxr-xr-x 1 root root 38512 Jul 28 07:09 wdctl lrwxrwxrwx 1 root root 8 Nov 6 2019 ypdomainname -> hostname -rwxr-xr-x 1 root root 1984 Mar 2 2021 zcat -rwxr-xr-x 1 root root 1678 Mar 2 2021 zcmp -rwxr-xr-x 1 root root 5880 Mar 2 2021 zdiff -rwxr-xr-x 1 root root 29 Mar 2 2021 zegrep -rwxr-xr-x 1 root root 29 Mar 2 2021 zfgrep -rwxr-xr-x 1 root root 2081 Mar 2 2021 zforce -rwxr-xr-x 1 root root 7585 Mar 2 2021 zgrep -rwxr-xr-x 1 root root 2206 Mar 2 2021 zless -rwxr-xr-x 1 root root 1842 Mar 2 2021 zmore -rwxr-xr-x 1 root root 4553 Mar 2 2021 znew I: user script /srv/workspace/pbuilder/13225/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: armhf Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 12), libcairo2-dev, libgenometools0-dev, python3 dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19398 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 12); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on libcairo2-dev; however: Package libcairo2-dev is not installed. pbuilder-satisfydepends-dummy depends on libgenometools0-dev; however: Package libgenometools0-dev is not installed. pbuilder-satisfydepends-dummy depends on python3; however: Package python3 is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} fontconfig{a} fontconfig-config{a} fonts-dejavu-core{a} genometools-common{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libblkid-dev{a} libbrotli-dev{a} libbrotli1{a} libbsd0{a} libcairo-gobject2{a} libcairo-script-interpreter2{a} libcairo2{a} libcairo2-dev{a} libdatrie1{a} libdebhelper-perl{a} libelf1{a} libexpat1{a} libexpat1-dev{a} libffi-dev{a} libfile-stripnondeterminism-perl{a} libfontconfig-dev{a} libfontconfig1{a} libfontconfig1-dev{a} libfreetype-dev{a} libfreetype6{a} libfreetype6-dev{a} libfribidi0{a} libgenometools0{a} libgenometools0-dev{a} libglib2.0-0{a} libglib2.0-bin{a} libglib2.0-data{a} libglib2.0-dev{a} libglib2.0-dev-bin{a} libgraphite2-3{a} libharfbuzz0b{a} libice-dev{a} libice6{a} libicu67{a} liblua5.1-0{a} liblzo2-2{a} libmagic-mgc{a} libmagic1{a} libmd0{a} libmount-dev{a} libmpdec3{a} libpango-1.0-0{a} libpangocairo-1.0-0{a} libpangoft2-1.0-0{a} libpcre16-3{a} libpcre2-16-0{a} libpcre2-32-0{a} libpcre2-dev{a} libpcre2-posix2{a} libpcre3-dev{a} libpcre32-3{a} libpcrecpp0v5{a} libpipeline1{a} libpixman-1-0{a} libpixman-1-dev{a} libpng-dev{a} libpng16-16{a} libpth20{a} libpthread-stubs0-dev{a} libpython3-stdlib{a} libpython3.9-minimal{a} libpython3.9-stdlib{a} libreadline8{a} libselinux1-dev{a} libsepol1-dev{a} libsigsegv2{a} libsm-dev{a} libsm6{a} libsub-override-perl{a} libthai-data{a} libthai0{a} libtool{a} libtre5{a} libuchardet0{a} libx11-6{a} libx11-data{a} libx11-dev{a} libxau-dev{a} libxau6{a} libxcb-render0{a} libxcb-render0-dev{a} libxcb-shm0{a} libxcb-shm0-dev{a} libxcb1{a} libxcb1-dev{a} libxdmcp-dev{a} libxdmcp6{a} libxext-dev{a} libxext6{a} libxml2{a} libxrender-dev{a} libxrender1{a} lua-md5{a} m4{a} man-db{a} media-types{a} pkg-config{a} po-debconf{a} python3{a} python3-distutils{a} python3-lib2to3{a} python3-minimal{a} python3.9{a} python3.9-minimal{a} readline-common{a} sensible-utils{a} ucf{a} uuid-dev{a} x11-common{a} x11proto-dev{a} x11proto-xext-dev{a} xorg-sgml-doctools{a} xtrans-dev{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl libpng-tools lynx shared-mime-info wget xdg-user-dirs 0 packages upgraded, 133 newly installed, 0 to remove and 0 not upgraded. Need to get 46.0 MB of archives. After unpacking 147 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian bullseye/main armhf bsdextrautils armhf 2.36.1-8 [138 kB] Get: 2 http://deb.debian.org/debian bullseye/main armhf libuchardet0 armhf 0.0.7-1 [65.0 kB] Get: 3 http://deb.debian.org/debian bullseye/main armhf groff-base armhf 1.22.4-6 [847 kB] Get: 4 http://deb.debian.org/debian bullseye/main armhf libpipeline1 armhf 1.5.3-1 [30.1 kB] Get: 5 http://deb.debian.org/debian bullseye/main armhf man-db armhf 2.9.4-2 [1319 kB] Get: 6 http://deb.debian.org/debian bullseye/main armhf libpython3.9-minimal armhf 3.9.2-1 [790 kB] Get: 7 http://deb.debian.org/debian bullseye/main armhf libexpat1 armhf 2.2.10-2 [76.3 kB] Get: 8 http://deb.debian.org/debian bullseye/main armhf python3.9-minimal armhf 3.9.2-1 [1630 kB] Get: 9 http://deb.debian.org/debian bullseye/main armhf python3-minimal armhf 3.9.2-3 [38.2 kB] Get: 10 http://deb.debian.org/debian bullseye/main armhf media-types all 4.0.0 [30.3 kB] Get: 11 http://deb.debian.org/debian bullseye/main armhf libmpdec3 armhf 2.5.1-1 [74.9 kB] Get: 12 http://deb.debian.org/debian bullseye/main armhf readline-common all 8.1-1 [73.7 kB] Get: 13 http://deb.debian.org/debian bullseye/main armhf libreadline8 armhf 8.1-1 [147 kB] Get: 14 http://deb.debian.org/debian bullseye/main armhf libpython3.9-stdlib armhf 3.9.2-1 [1608 kB] Get: 15 http://deb.debian.org/debian bullseye/main armhf python3.9 armhf 3.9.2-1 [466 kB] Get: 16 http://deb.debian.org/debian bullseye/main armhf libpython3-stdlib armhf 3.9.2-3 [21.4 kB] Get: 17 http://deb.debian.org/debian bullseye/main armhf python3 armhf 3.9.2-3 [37.9 kB] Get: 18 http://deb.debian.org/debian bullseye/main armhf sensible-utils all 0.0.14 [14.8 kB] Get: 19 http://deb.debian.org/debian bullseye/main armhf libmagic-mgc armhf 1:5.39-3 [273 kB] Get: 20 http://deb.debian.org/debian bullseye/main armhf libmagic1 armhf 1:5.39-3 [117 kB] Get: 21 http://deb.debian.org/debian bullseye/main armhf file armhf 1:5.39-3 [68.1 kB] Get: 22 http://deb.debian.org/debian bullseye/main armhf gettext-base armhf 0.21-4 [171 kB] Get: 23 http://deb.debian.org/debian bullseye/main armhf ucf all 3.0043 [74.0 kB] Get: 24 http://deb.debian.org/debian bullseye/main armhf libsigsegv2 armhf 2.13-1 [34.0 kB] Get: 25 http://deb.debian.org/debian bullseye/main armhf m4 armhf 1.4.18-5 [192 kB] Get: 26 http://deb.debian.org/debian bullseye/main armhf autoconf all 2.69-14 [313 kB] Get: 27 http://deb.debian.org/debian bullseye/main armhf autotools-dev all 20180224.1+nmu1 [77.1 kB] Get: 28 http://deb.debian.org/debian bullseye/main armhf automake all 1:1.16.3-2 [814 kB] Get: 29 http://deb.debian.org/debian bullseye/main armhf autopoint all 0.21-4 [510 kB] Get: 30 http://deb.debian.org/debian bullseye/main armhf libdebhelper-perl all 13.3.4 [189 kB] Get: 31 http://deb.debian.org/debian bullseye/main armhf libtool all 2.4.6-15 [513 kB] Get: 32 http://deb.debian.org/debian bullseye/main armhf dh-autoreconf all 20 [17.1 kB] Get: 33 http://deb.debian.org/debian bullseye/main armhf libarchive-zip-perl all 1.68-1 [104 kB] Get: 34 http://deb.debian.org/debian bullseye/main armhf libsub-override-perl all 0.09-2 [10.2 kB] Get: 35 http://deb.debian.org/debian bullseye/main armhf libfile-stripnondeterminism-perl all 1.12.0-1 [26.3 kB] Get: 36 http://deb.debian.org/debian bullseye/main armhf dh-strip-nondeterminism all 1.12.0-1 [15.4 kB] Get: 37 http://deb.debian.org/debian bullseye/main armhf libelf1 armhf 0.183-1 [161 kB] Get: 38 http://deb.debian.org/debian bullseye/main armhf dwz armhf 0.13+20210201-1 [179 kB] Get: 39 http://deb.debian.org/debian bullseye/main armhf libicu67 armhf 67.1-7 [8319 kB] Get: 40 http://deb.debian.org/debian bullseye/main armhf libxml2 armhf 2.9.10+dfsg-6.7 [602 kB] Get: 41 http://deb.debian.org/debian bullseye/main armhf gettext armhf 0.21-4 [1243 kB] Get: 42 http://deb.debian.org/debian bullseye/main armhf intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get: 43 http://deb.debian.org/debian bullseye/main armhf po-debconf all 1.0.21+nmu1 [248 kB] Get: 44 http://deb.debian.org/debian bullseye/main armhf debhelper all 13.3.4 [1049 kB] Get: 45 http://deb.debian.org/debian bullseye/main armhf libbrotli1 armhf 1.0.9-2+b2 [262 kB] Get: 46 http://deb.debian.org/debian bullseye/main armhf libpng16-16 armhf 1.6.37-3 [277 kB] Get: 47 http://deb.debian.org/debian bullseye/main armhf libfreetype6 armhf 2.10.4+dfsg-1 [357 kB] Get: 48 http://deb.debian.org/debian bullseye/main armhf fonts-dejavu-core all 2.37-2 [1069 kB] Get: 49 http://deb.debian.org/debian bullseye/main armhf fontconfig-config all 2.13.1-4.2 [281 kB] Get: 50 http://deb.debian.org/debian bullseye/main armhf libfontconfig1 armhf 2.13.1-4.2 [329 kB] Get: 51 http://deb.debian.org/debian bullseye/main armhf fontconfig armhf 2.13.1-4.2 [415 kB] Get: 52 http://deb.debian.org/debian bullseye/main armhf liblua5.1-0 armhf 5.1.5-8.1+b3 [84.1 kB] Get: 53 http://deb.debian.org/debian bullseye/main armhf libpixman-1-0 armhf 0.40.0-1 [466 kB] Get: 54 http://deb.debian.org/debian bullseye/main armhf libxau6 armhf 1:1.0.9-1 [19.0 kB] Get: 55 http://deb.debian.org/debian bullseye/main armhf libmd0 armhf 1.0.3-3 [27.4 kB] Get: 56 http://deb.debian.org/debian bullseye/main armhf libbsd0 armhf 0.11.3-1 [103 kB] Get: 57 http://deb.debian.org/debian bullseye/main armhf libxdmcp6 armhf 1:1.1.2-3 [24.9 kB] Get: 58 http://deb.debian.org/debian bullseye/main armhf libxcb1 armhf 1.14-3 [136 kB] Get: 59 http://deb.debian.org/debian bullseye/main armhf libx11-data all 2:1.7.2-1 [311 kB] Get: 60 http://deb.debian.org/debian bullseye/main armhf libx11-6 armhf 2:1.7.2-1 [713 kB] Get: 61 http://deb.debian.org/debian bullseye/main armhf libxcb-render0 armhf 1.14-3 [110 kB] Get: 62 http://deb.debian.org/debian bullseye/main armhf libxcb-shm0 armhf 1.14-3 [101 kB] Get: 63 http://deb.debian.org/debian bullseye/main armhf libxext6 armhf 2:1.3.3-1.1 [47.8 kB] Get: 64 http://deb.debian.org/debian bullseye/main armhf libxrender1 armhf 1:0.9.10-1 [29.9 kB] Get: 65 http://deb.debian.org/debian bullseye/main armhf libcairo2 armhf 1.16.0-5 [615 kB] Get: 66 http://deb.debian.org/debian bullseye/main armhf libpth20 armhf 2.0.7-22 [44.1 kB] Get: 67 http://deb.debian.org/debian bullseye/main armhf libfribidi0 armhf 1.0.8-2 [62.9 kB] Get: 68 http://deb.debian.org/debian bullseye/main armhf libglib2.0-0 armhf 2.66.8-1 [1206 kB] Get: 69 http://deb.debian.org/debian bullseye/main armhf libgraphite2-3 armhf 1.3.14-1 [70.5 kB] Get: 70 http://deb.debian.org/debian bullseye/main armhf libharfbuzz0b armhf 2.7.4-1 [1427 kB] Get: 71 http://deb.debian.org/debian bullseye/main armhf libthai-data all 0.1.28-3 [170 kB] Get: 72 http://deb.debian.org/debian bullseye/main armhf libdatrie1 armhf 0.2.13-1 [39.4 kB] Get: 73 http://deb.debian.org/debian bullseye/main armhf libthai0 armhf 0.1.28-3 [50.9 kB] Get: 74 http://deb.debian.org/debian bullseye/main armhf libpango-1.0-0 armhf 1.46.2-3 [173 kB] Get: 75 http://deb.debian.org/debian bullseye/main armhf libpangoft2-1.0-0 armhf 1.46.2-3 [56.1 kB] Get: 76 http://deb.debian.org/debian bullseye/main armhf libpangocairo-1.0-0 armhf 1.46.2-3 [46.8 kB] Get: 77 http://deb.debian.org/debian bullseye/main armhf libtre5 armhf 0.8.0-6+b1 [52.8 kB] Get: 78 http://deb.debian.org/debian bullseye/main armhf genometools-common all 1.6.1+ds-3 [197 kB] Get: 79 http://deb.debian.org/debian bullseye/main armhf uuid-dev armhf 2.36.1-8 [97.9 kB] Get: 80 http://deb.debian.org/debian bullseye/main armhf libblkid-dev armhf 2.36.1-8 [217 kB] Get: 81 http://deb.debian.org/debian bullseye/main armhf libbrotli-dev armhf 1.0.9-2+b2 [270 kB] Get: 82 http://deb.debian.org/debian bullseye/main armhf libcairo-gobject2 armhf 1.16.0-5 [125 kB] Get: 83 http://deb.debian.org/debian bullseye/main armhf liblzo2-2 armhf 2.10-2 [50.7 kB] Get: 84 http://deb.debian.org/debian bullseye/main armhf libcairo-script-interpreter2 armhf 1.16.0-5 [153 kB] Get: 85 http://deb.debian.org/debian bullseye/main armhf libexpat1-dev armhf 2.2.10-2 [123 kB] Get: 86 http://deb.debian.org/debian bullseye/main armhf zlib1g-dev armhf 1:1.2.11.dfsg-2 [185 kB] Get: 87 http://deb.debian.org/debian bullseye/main armhf libpng-dev armhf 1.6.37-3 [282 kB] Get: 88 http://deb.debian.org/debian bullseye/main armhf libfreetype-dev armhf 2.10.4+dfsg-1 [516 kB] Get: 89 http://deb.debian.org/debian bullseye/main armhf libfreetype6-dev armhf 2.10.4+dfsg-1 [82.4 kB] Get: 90 http://deb.debian.org/debian bullseye/main armhf pkg-config armhf 0.29.2-1 [62.4 kB] Get: 91 http://deb.debian.org/debian bullseye/main armhf libfontconfig-dev armhf 2.13.1-4.2 [353 kB] Get: 92 http://deb.debian.org/debian bullseye/main armhf libfontconfig1-dev armhf 2.13.1-4.2 [238 kB] Get: 93 http://deb.debian.org/debian bullseye/main armhf xorg-sgml-doctools all 1:1.11-1.1 [22.1 kB] Get: 94 http://deb.debian.org/debian bullseye/main armhf x11proto-dev all 2020.1-1 [594 kB] Get: 95 http://deb.debian.org/debian bullseye/main armhf libxau-dev armhf 1:1.0.9-1 [22.4 kB] Get: 96 http://deb.debian.org/debian bullseye/main armhf libxdmcp-dev armhf 1:1.1.2-3 [40.7 kB] Get: 97 http://deb.debian.org/debian bullseye/main armhf xtrans-dev all 1.4.0-1 [98.7 kB] Get: 98 http://deb.debian.org/debian bullseye/main armhf libpthread-stubs0-dev armhf 0.4-1 [5344 B] Get: 99 http://deb.debian.org/debian bullseye/main armhf libxcb1-dev armhf 1.14-3 [175 kB] Get: 100 http://deb.debian.org/debian bullseye/main armhf libx11-dev armhf 2:1.7.2-1 [785 kB] Get: 101 http://deb.debian.org/debian bullseye/main armhf libxrender-dev armhf 1:0.9.10-1 [37.8 kB] Get: 102 http://deb.debian.org/debian bullseye/main armhf x11proto-xext-dev all 2020.1-1 [3404 B] Get: 103 http://deb.debian.org/debian bullseye/main armhf libxext-dev armhf 2:1.3.3-1.1 [103 kB] Get: 104 http://deb.debian.org/debian bullseye/main armhf x11-common all 1:7.7+22 [252 kB] Get: 105 http://deb.debian.org/debian bullseye/main armhf libice6 armhf 2:1.0.10-1 [51.9 kB] Get: 106 http://deb.debian.org/debian bullseye/main armhf libsm6 armhf 2:1.2.3-1 [33.0 kB] Get: 107 http://deb.debian.org/debian bullseye/main armhf libice-dev armhf 2:1.0.10-1 [61.9 kB] Get: 108 http://deb.debian.org/debian bullseye/main armhf libsm-dev armhf 2:1.2.3-1 [36.1 kB] Get: 109 http://deb.debian.org/debian bullseye/main armhf libpixman-1-dev armhf 0.40.0-1 [488 kB] Get: 110 http://deb.debian.org/debian bullseye/main armhf libxcb-render0-dev armhf 1.14-3 [114 kB] Get: 111 http://deb.debian.org/debian bullseye/main armhf libxcb-shm0-dev armhf 1.14-3 [103 kB] Get: 112 http://deb.debian.org/debian bullseye/main armhf libffi-dev armhf 3.3-6 [52.8 kB] Get: 113 http://deb.debian.org/debian bullseye/main armhf libglib2.0-data all 2.66.8-1 [1164 kB] Get: 114 http://deb.debian.org/debian bullseye/main armhf libglib2.0-bin armhf 2.66.8-1 [135 kB] Get: 115 http://deb.debian.org/debian bullseye/main armhf python3-lib2to3 all 3.9.2-1 [77.8 kB] Get: 116 http://deb.debian.org/debian bullseye/main armhf python3-distutils all 3.9.2-1 [143 kB] Get: 117 http://deb.debian.org/debian bullseye/main armhf libglib2.0-dev-bin armhf 2.66.8-1 [176 kB] Get: 118 http://deb.debian.org/debian bullseye/main armhf libsepol1-dev armhf 3.1-1 [317 kB] Get: 119 http://deb.debian.org/debian bullseye/main armhf libpcre2-16-0 armhf 10.36-2 [197 kB] Get: 120 http://deb.debian.org/debian bullseye/main armhf libpcre2-32-0 armhf 10.36-2 [188 kB] Get: 121 http://deb.debian.org/debian bullseye/main armhf libpcre2-posix2 armhf 10.36-2 [48.5 kB] Get: 122 http://deb.debian.org/debian bullseye/main armhf libpcre2-dev armhf 10.36-2 [638 kB] Get: 123 http://deb.debian.org/debian bullseye/main armhf libselinux1-dev armhf 3.1-3 [163 kB] Get: 124 http://deb.debian.org/debian bullseye/main armhf libmount-dev armhf 2.36.1-8 [77.8 kB] Get: 125 http://deb.debian.org/debian bullseye/main armhf libpcre16-3 armhf 2:8.39-13 [239 kB] Get: 126 http://deb.debian.org/debian bullseye/main armhf libpcre32-3 armhf 2:8.39-13 [231 kB] Get: 127 http://deb.debian.org/debian bullseye/main armhf libpcrecpp0v5 armhf 2:8.39-13 [150 kB] Get: 128 http://deb.debian.org/debian bullseye/main armhf libpcre3-dev armhf 2:8.39-13 [587 kB] Get: 129 http://deb.debian.org/debian bullseye/main armhf libglib2.0-dev armhf 2.66.8-1 [1471 kB] Get: 130 http://deb.debian.org/debian bullseye/main armhf libcairo2-dev armhf 1.16.0-5 [659 kB] Get: 131 http://deb.debian.org/debian bullseye/main armhf lua-md5 armhf 1.2+git+1+8d87fee-1.1 [12.4 kB] Get: 132 http://deb.debian.org/debian bullseye/main armhf libgenometools0 armhf 1.6.1+ds-3 [1244 kB] Get: 133 http://deb.debian.org/debian bullseye/main armhf libgenometools0-dev armhf 1.6.1+ds-3 [97.1 kB] Fetched 46.0 MB in 9s (4896 kB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package bsdextrautils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19398 files and directories currently installed.) Preparing to unpack .../0-bsdextrautils_2.36.1-8_armhf.deb ... Unpacking bsdextrautils (2.36.1-8) ... Selecting previously unselected package libuchardet0:armhf. Preparing to unpack .../1-libuchardet0_0.0.7-1_armhf.deb ... Unpacking libuchardet0:armhf (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../2-groff-base_1.22.4-6_armhf.deb ... Unpacking groff-base (1.22.4-6) ... Selecting previously unselected package libpipeline1:armhf. Preparing to unpack .../3-libpipeline1_1.5.3-1_armhf.deb ... Unpacking libpipeline1:armhf (1.5.3-1) ... Selecting previously unselected package man-db. Preparing to unpack .../4-man-db_2.9.4-2_armhf.deb ... Unpacking man-db (2.9.4-2) ... Selecting previously unselected package libpython3.9-minimal:armhf. Preparing to unpack .../5-libpython3.9-minimal_3.9.2-1_armhf.deb ... Unpacking libpython3.9-minimal:armhf (3.9.2-1) ... Selecting previously unselected package libexpat1:armhf. Preparing to unpack .../6-libexpat1_2.2.10-2_armhf.deb ... Unpacking libexpat1:armhf (2.2.10-2) ... Selecting previously unselected package python3.9-minimal. Preparing to unpack .../7-python3.9-minimal_3.9.2-1_armhf.deb ... Unpacking python3.9-minimal (3.9.2-1) ... Setting up libpython3.9-minimal:armhf (3.9.2-1) ... Setting up libexpat1:armhf (2.2.10-2) ... Setting up python3.9-minimal (3.9.2-1) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20265 files and directories currently installed.) Preparing to unpack .../0-python3-minimal_3.9.2-3_armhf.deb ... Unpacking python3-minimal (3.9.2-3) ... Selecting previously unselected package media-types. Preparing to unpack .../1-media-types_4.0.0_all.deb ... Unpacking media-types (4.0.0) ... Selecting previously unselected package libmpdec3:armhf. Preparing to unpack .../2-libmpdec3_2.5.1-1_armhf.deb ... Unpacking libmpdec3:armhf (2.5.1-1) ... Selecting previously unselected package readline-common. Preparing to unpack .../3-readline-common_8.1-1_all.deb ... Unpacking readline-common (8.1-1) ... Selecting previously unselected package libreadline8:armhf. Preparing to unpack .../4-libreadline8_8.1-1_armhf.deb ... Unpacking libreadline8:armhf (8.1-1) ... Selecting previously unselected package libpython3.9-stdlib:armhf. Preparing to unpack .../5-libpython3.9-stdlib_3.9.2-1_armhf.deb ... Unpacking libpython3.9-stdlib:armhf (3.9.2-1) ... Selecting previously unselected package python3.9. Preparing to unpack .../6-python3.9_3.9.2-1_armhf.deb ... Unpacking python3.9 (3.9.2-1) ... Selecting previously unselected package libpython3-stdlib:armhf. Preparing to unpack .../7-libpython3-stdlib_3.9.2-3_armhf.deb ... Unpacking libpython3-stdlib:armhf (3.9.2-3) ... Setting up python3-minimal (3.9.2-3) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20686 files and directories currently installed.) Preparing to unpack .../000-python3_3.9.2-3_armhf.deb ... Unpacking python3 (3.9.2-3) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../001-sensible-utils_0.0.14_all.deb ... Unpacking sensible-utils (0.0.14) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../002-libmagic-mgc_1%3a5.39-3_armhf.deb ... Unpacking libmagic-mgc (1:5.39-3) ... Selecting previously unselected package libmagic1:armhf. Preparing to unpack .../003-libmagic1_1%3a5.39-3_armhf.deb ... Unpacking libmagic1:armhf (1:5.39-3) ... Selecting previously unselected package file. Preparing to unpack .../004-file_1%3a5.39-3_armhf.deb ... Unpacking file (1:5.39-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../005-gettext-base_0.21-4_armhf.deb ... Unpacking gettext-base (0.21-4) ... Selecting previously unselected package ucf. Preparing to unpack .../006-ucf_3.0043_all.deb ... Moving old data out of the way Unpacking ucf (3.0043) ... Selecting previously unselected package libsigsegv2:armhf. Preparing to unpack .../007-libsigsegv2_2.13-1_armhf.deb ... Unpacking libsigsegv2:armhf (2.13-1) ... Selecting previously unselected package m4. Preparing to unpack .../008-m4_1.4.18-5_armhf.deb ... Unpacking m4 (1.4.18-5) ... Selecting previously unselected package autoconf. Preparing to unpack .../009-autoconf_2.69-14_all.deb ... Unpacking autoconf (2.69-14) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../010-autotools-dev_20180224.1+nmu1_all.deb ... Unpacking autotools-dev (20180224.1+nmu1) ... Selecting previously unselected package automake. Preparing to unpack .../011-automake_1%3a1.16.3-2_all.deb ... Unpacking automake (1:1.16.3-2) ... Selecting previously unselected package autopoint. Preparing to unpack .../012-autopoint_0.21-4_all.deb ... Unpacking autopoint (0.21-4) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../013-libdebhelper-perl_13.3.4_all.deb ... Unpacking libdebhelper-perl (13.3.4) ... Selecting previously unselected package libtool. Preparing to unpack .../014-libtool_2.4.6-15_all.deb ... Unpacking libtool (2.4.6-15) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../015-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../016-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libsub-override-perl. Preparing to unpack .../017-libsub-override-perl_0.09-2_all.deb ... Unpacking libsub-override-perl (0.09-2) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../018-libfile-stripnondeterminism-perl_1.12.0-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.12.0-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../019-dh-strip-nondeterminism_1.12.0-1_all.deb ... Unpacking dh-strip-nondeterminism (1.12.0-1) ... Selecting previously unselected package libelf1:armhf. Preparing to unpack .../020-libelf1_0.183-1_armhf.deb ... Unpacking libelf1:armhf (0.183-1) ... Selecting previously unselected package dwz. Preparing to unpack .../021-dwz_0.13+20210201-1_armhf.deb ... Unpacking dwz (0.13+20210201-1) ... Selecting previously unselected package libicu67:armhf. Preparing to unpack .../022-libicu67_67.1-7_armhf.deb ... Unpacking libicu67:armhf (67.1-7) ... Selecting previously unselected package libxml2:armhf. Preparing to unpack .../023-libxml2_2.9.10+dfsg-6.7_armhf.deb ... Unpacking libxml2:armhf (2.9.10+dfsg-6.7) ... Selecting previously unselected package gettext. Preparing to unpack .../024-gettext_0.21-4_armhf.deb ... Unpacking gettext (0.21-4) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../025-intltool-debian_0.35.0+20060710.5_all.deb ... Unpacking intltool-debian (0.35.0+20060710.5) ... Selecting previously unselected package po-debconf. Preparing to unpack .../026-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../027-debhelper_13.3.4_all.deb ... Unpacking debhelper (13.3.4) ... Selecting previously unselected package libbrotli1:armhf. Preparing to unpack .../028-libbrotli1_1.0.9-2+b2_armhf.deb ... Unpacking libbrotli1:armhf (1.0.9-2+b2) ... Selecting previously unselected package libpng16-16:armhf. Preparing to unpack .../029-libpng16-16_1.6.37-3_armhf.deb ... Unpacking libpng16-16:armhf (1.6.37-3) ... Selecting previously unselected package libfreetype6:armhf. Preparing to unpack .../030-libfreetype6_2.10.4+dfsg-1_armhf.deb ... Unpacking libfreetype6:armhf (2.10.4+dfsg-1) ... Selecting previously unselected package fonts-dejavu-core. Preparing to unpack .../031-fonts-dejavu-core_2.37-2_all.deb ... Unpacking fonts-dejavu-core (2.37-2) ... Selecting previously unselected package fontconfig-config. Preparing to unpack .../032-fontconfig-config_2.13.1-4.2_all.deb ... Unpacking fontconfig-config (2.13.1-4.2) ... Selecting previously unselected package libfontconfig1:armhf. Preparing to unpack .../033-libfontconfig1_2.13.1-4.2_armhf.deb ... Unpacking libfontconfig1:armhf (2.13.1-4.2) ... Selecting previously unselected package fontconfig. Preparing to unpack .../034-fontconfig_2.13.1-4.2_armhf.deb ... Unpacking fontconfig (2.13.1-4.2) ... Selecting previously unselected package liblua5.1-0:armhf. Preparing to unpack .../035-liblua5.1-0_5.1.5-8.1+b3_armhf.deb ... Unpacking liblua5.1-0:armhf (5.1.5-8.1+b3) ... Selecting previously unselected package libpixman-1-0:armhf. Preparing to unpack .../036-libpixman-1-0_0.40.0-1_armhf.deb ... Unpacking libpixman-1-0:armhf (0.40.0-1) ... Selecting previously unselected package libxau6:armhf. Preparing to unpack .../037-libxau6_1%3a1.0.9-1_armhf.deb ... Unpacking libxau6:armhf (1:1.0.9-1) ... Selecting previously unselected package libmd0:armhf. Preparing to unpack .../038-libmd0_1.0.3-3_armhf.deb ... Unpacking libmd0:armhf (1.0.3-3) ... Selecting previously unselected package libbsd0:armhf. 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Setting up bsdextrautils (2.36.1-8) ... update-alternatives: using /usr/bin/write.ul to provide /usr/bin/write (write) in auto mode Setting up libpcre16-3:armhf (2:8.39-13) ... Setting up libicu67:armhf (67.1-7) ... Setting up libdatrie1:armhf (0.2.13-1) ... Setting up libmagic-mgc (1:5.39-3) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libglib2.0-0:armhf (2.66.8-1) ... No schema files found: doing nothing. Setting up libdebhelper-perl (13.3.4) ... Setting up libbrotli1:armhf (1.0.9-2+b2) ... Setting up x11-common (1:7.7+22) ... invoke-rc.d: could not determine current runlevel Setting up X socket directories... /tmp/.X11-unix /tmp/.ICE-unix. Setting up libmagic1:armhf (1:5.39-3) ... Setting up libsepol1-dev:armhf (3.1-1) ... Setting up gettext-base (0.21-4) ... Setting up liblzo2-2:armhf (2.10-2) ... Setting up file (1:5.39-3) ... Setting up libffi-dev:armhf (3.3-6) ... Setting up libpthread-stubs0-dev:armhf (0.4-1) ... Setting up libpcre2-16-0:armhf (10.36-2) ... Setting up xtrans-dev (1.4.0-1) ... Setting up autotools-dev (20180224.1+nmu1) ... Setting up libpcre2-32-0:armhf (10.36-2) ... Setting up libglib2.0-data (2.66.8-1) ... Setting up lua-md5:armhf (1.2+git+1+8d87fee-1.1) ... Setting up libexpat1-dev:armhf (2.2.10-2) ... Setting up libx11-data (2:1.7.2-1) ... Setting up libpth20:armhf (2.0.7-22) ... Setting up uuid-dev:armhf (2.36.1-8) ... Setting up libsigsegv2:armhf (2.13-1) ... Setting up libfribidi0:armhf (1.0.8-2) ... Setting up libpng16-16:armhf (1.6.37-3) ... Setting up libpcre32-3:armhf (2:8.39-13) ... Setting up autopoint (0.21-4) ... Setting up pkg-config (0.29.2-1) ... Setting up fonts-dejavu-core (2.37-2) ... Setting up libpcre2-posix2:armhf (10.36-2) ... Setting up zlib1g-dev:armhf (1:1.2.11.dfsg-2) ... Setting up libmd0:armhf (1.0.3-3) ... Setting up sensible-utils (0.0.14) ... Setting up libuchardet0:armhf (0.0.7-1) ... Setting up liblua5.1-0:armhf (5.1.5-8.1+b3) ... Setting up libmpdec3:armhf (2.5.1-1) ... Setting up libsub-override-perl (0.09-2) ... Setting up libthai-data (0.1.28-3) ... Setting up xorg-sgml-doctools (1:1.11-1.1) ... Setting up libbsd0:armhf (0.11.3-1) ... Setting up libelf1:armhf (0.183-1) ... Setting up readline-common (8.1-1) ... Setting up libxml2:armhf (2.9.10+dfsg-6.7) ... Setting up libbrotli-dev:armhf (1.0.9-2+b2) ... Setting up x11proto-dev (2020.1-1) ... Setting up libfile-stripnondeterminism-perl (1.12.0-1) ... Setting up libblkid-dev:armhf (2.36.1-8) ... Setting up libice6:armhf (2:1.0.10-1) ... Setting up libxdmcp6:armhf (1:1.1.2-3) ... Setting up libxcb1:armhf (1.14-3) ... Setting up gettext (0.21-4) ... Setting up libxau-dev:armhf (1:1.0.9-1) ... Setting up libpcre2-dev:armhf (10.36-2) ... Setting up libice-dev:armhf (2:1.0.10-1) ... Setting up libtool (2.4.6-15) ... Setting up libxcb-render0:armhf (1.14-3) ... Setting up libselinux1-dev:armhf (3.1-3) ... Setting up libpcre3-dev:armhf (2:8.39-13) ... Setting up libreadline8:armhf (8.1-1) ... Setting up libpng-dev:armhf (1.6.37-3) ... Setting up libglib2.0-bin (2.66.8-1) ... Setting up m4 (1.4.18-5) ... Setting up libxcb-shm0:armhf (1.14-3) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up libthai0:armhf (0.1.28-3) ... Setting up libxdmcp-dev:armhf (1:1.1.2-3) ... Setting up libfreetype6:armhf (2.10.4+dfsg-1) ... Setting up ucf (3.0043) ... Setting up autoconf (2.69-14) ... Setting up dh-strip-nondeterminism (1.12.0-1) ... Setting up x11proto-xext-dev (2020.1-1) ... Setting up dwz (0.13+20210201-1) ... Setting up groff-base (1.22.4-6) ... Setting up libx11-6:armhf (2:1.7.2-1) ... Setting up libharfbuzz0b:armhf (2.7.4-1) ... Setting up libsm6:armhf (2:1.2.3-1) ... Setting up libmount-dev:armhf (2.36.1-8) ... Setting up libpython3.9-stdlib:armhf (3.9.2-1) ... Setting up libpython3-stdlib:armhf (3.9.2-3) ... Setting up automake (1:1.16.3-2) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libxcb1-dev:armhf (1.14-3) ... Setting up libxrender1:armhf (1:0.9.10-1) ... Setting up libsm-dev:armhf (2:1.2.3-1) ... Setting up fontconfig-config (2.13.1-4.2) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libx11-dev:armhf (2:1.7.2-1) ... Setting up libxext6:armhf (2:1.3.3-1.1) ... Setting up man-db (2.9.4-2) ... Not building database; man-db/auto-update is not 'true'. Setting up libfreetype-dev:armhf (2.10.4+dfsg-1) ... Setting up dh-autoreconf (20) ... Setting up libxcb-shm0-dev:armhf (1.14-3) ... Setting up libxcb-render0-dev:armhf (1.14-3) ... Setting up libxext-dev:armhf (2:1.3.3-1.1) ... Setting up libfontconfig1:armhf (2.13.1-4.2) ... Setting up libxrender-dev:armhf (1:0.9.10-1) ... Setting up python3.9 (3.9.2-1) ... Setting up fontconfig (2.13.1-4.2) ... Regenerating fonts cache... done. Setting up libpango-1.0-0:armhf (1.46.2-3) ... Setting up debhelper (13.3.4) ... Setting up python3 (3.9.2-3) ... Setting up libcairo2:armhf (1.16.0-5) ... Setting up libfreetype6-dev:armhf (2.10.4+dfsg-1) ... Setting up libcairo-gobject2:armhf (1.16.0-5) ... Setting up libpangoft2-1.0-0:armhf (1.46.2-3) ... Setting up python3-lib2to3 (3.9.2-1) ... Setting up libpangocairo-1.0-0:armhf (1.46.2-3) ... Setting up python3-distutils (3.9.2-1) ... Setting up libcairo-script-interpreter2:armhf (1.16.0-5) ... Setting up libglib2.0-dev-bin (2.66.8-1) ... Setting up libfontconfig-dev:armhf (2.13.1-4.2) ... Setting up libglib2.0-dev:armhf (2.66.8-1) ... Setting up genometools-common (1.6.1+ds-3) ... Setting up libcairo2-dev:armhf (1.16.0-5) ... Setting up libgenometools0 (1.6.1+ds-3) ... Setting up libfontconfig1-dev:armhf (2.13.1-4.2) ... Setting up libgenometools0-dev (1.6.1+ds-3) ... Processing triggers for libc-bin (2.31-13) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps Reading package lists... Building dependency tree... Reading state information... fakeroot is already the newest version (1.25.3-1.1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package I: Running cd /build/aegean-0.16.0+dfsg/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../aegean_0.16.0+dfsg-2_source.changes dpkg-buildpackage: info: source package aegean dpkg-buildpackage: info: source version 0.16.0+dfsg-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Sascha Steinbiss dpkg-source --before-build . dpkg-buildpackage: info: host architecture armhf fakeroot debian/rules clean dh clean dh_auto_clean make -j3 clean make[1]: Entering directory '/build/aegean-0.16.0+dfsg' rm -rf bin/parseval bin/canon-gff3 bin/locuspocus bin/gaeval bin/xtractore bin/pmrna bin/tidygff3 bin/unittests libaegean.a obj/AgnAttributeFilterStream.o obj/AgnCliquePair.o obj/AgnCompareReportHTML.o obj/AgnCompareReportText.o obj/AgnComparison.o obj/AgnFilterStream.o obj/AgnGaevalVisitor.o obj/AgnGeneStream.o obj/AgnInferCDSVisitor.o obj/AgnInferExonsVisitor.o obj/AgnInferParentStream.o obj/AgnLocus.o obj/AgnLocusFilterStream.o obj/AgnLocusMapVisitor.o obj/AgnLocusRefineStream.o obj/AgnLocusStream.o obj/AgnMrnaRepVisitor.o obj/AgnPseudogeneFixVisitor.o obj/AgnRemoveChildrenVisitor.o obj/AgnTranscriptClique.o obj/AgnTypecheck.o obj/AgnUnitTest.o obj/AgnUtils.o inc/core/AgnVersion.h bin/*.dSYM make[1]: Leaving directory '/build/aegean-0.16.0+dfsg' dh_clean debian/rules build dh build dh_update_autotools_config dh_autoreconf dh_auto_configure debian/rules override_dh_auto_build make[1]: Entering directory '/build/aegean-0.16.0+dfsg' dh_auto_build -- prefix=/build/aegean-0.16.0+dfsg/debian/tmp 64bit=no errorcheck=no make -j3 "INSTALL=install --strip-program=true" prefix=/build/aegean-0.16.0\+dfsg/debian/tmp 64bit=no errorcheck=no make[2]: Entering directory '/build/aegean-0.16.0+dfsg' [print inc/core/AgnVersion.h] [compile AgnAttributeFilterStream] [compile AgnCliquePair] [compile AgnCompareReportHTML] [compile AgnCompareReportText] In file included from /usr/include/string.h:495, from src/core/AgnCompareReportText.c:11: In function ‘strncpy’, inlined from ‘compare_report_text_comp_class_summary’ at src/core/AgnCompareReportText.c:287:3: /usr/include/arm-linux-gnueabihf/bits/string_fortified.h:106:10: warning: ‘__builtin___strncpy_chk’ output truncated before terminating nul copying as many bytes from a string as its length [-Wstringop-truncation] 106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/core/AgnCompareReportText.c: In function ‘compare_report_text_comp_class_summary’: src/core/AgnCompareReportText.c:287:3: note: length computed here 287 | strncpy(header + 4, label, strlen(label)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [compile AgnComparison] In file included from /usr/include/string.h:495, from src/core/AgnCompareReportText.c:11: In function ‘strncpy’, inlined from ‘compare_report_text_summary_struc’ at src/core/AgnCompareReportText.c:589:3: /usr/include/arm-linux-gnueabihf/bits/string_fortified.h:106:10: warning: ‘__builtin___strncpy_chk’ output truncated before terminating nul copying as many bytes from a string as its length [-Wstringop-truncation] 106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/core/AgnCompareReportText.c: In function ‘compare_report_text_summary_struc’: src/core/AgnCompareReportText.c:589:3: note: length computed here 589 | strncpy(buffer + 14, units, strlen(units)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/string.h:495, from src/core/AgnCompareReportText.c:11: In function ‘strncpy’, inlined from ‘compare_report_text_summary_struc’ at src/core/AgnCompareReportText.c:599:3: /usr/include/arm-linux-gnueabihf/bits/string_fortified.h:106:10: warning: ‘__builtin___strncpy_chk’ output truncated before terminating nul copying as many bytes from a string as its length [-Wstringop-truncation] 106 | return __builtin___strncpy_chk (__dest, __src, __len, __bos (__dest)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/core/AgnCompareReportText.c: In function ‘compare_report_text_summary_struc’: src/core/AgnCompareReportText.c:599:3: note: length computed here 599 | strncpy(buffer + 15, units, strlen(units)); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ [compile AgnFilterStream] [compile AgnGaevalVisitor] [compile AgnGeneStream] [compile AgnInferCDSVisitor] [compile AgnInferExonsVisitor] src/core/AgnInferCDSVisitor.c: In function ‘infer_cds_visitor_visit_feature_node’: src/core/AgnInferCDSVisitor.c:453:25: warning: ‘start_codon’ may be used uninitialized in this function [-Wmaybe-uninitialized] 453 | right_codon_range = gt_genome_node_get_range(*(GtGenomeNode **)start_codon); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ src/core/AgnInferCDSVisitor.c:430:19: note: ‘start_codon’ was declared here 430 | GtFeatureNode **start_codon, **stop_codon; | ^~~~~~~~~~~ src/core/AgnInferExonsVisitor.c: In function ‘infer_exons_visitor_visit_gene_collapse_feature’: src/core/AgnInferExonsVisitor.c:325:34: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 3 has type ‘size_t’ {aka ‘unsigned int’} [-Wformat=] 325 | gt_logger_log(v->logger, "[AgnInferExonsVisitor::infer_exons_visitor" | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 | "_visit_gene_collapse_feature] mRNA ID is too long (%lu " 327 | "characters), will be truncated\n", strlen(tid)); | ~~~~~~~~~~~ | | | size_t {aka unsigned int} src/core/AgnInferExonsVisitor.c:326:77: note: format string is defined here 326 | "_visit_gene_collapse_feature] mRNA ID is too long (%lu " | ~~^ | | | long unsigned int | %u [compile AgnInferParentStream] [compile AgnLocus] [compile AgnLocusFilterStream] [compile AgnLocusMapVisitor] [compile AgnLocusRefineStream] [compile AgnLocusStream] [compile AgnMrnaRepVisitor] [compile AgnPseudogeneFixVisitor] [compile AgnRemoveChildrenVisitor] [compile AgnTranscriptClique] [compile AgnTypecheck] [compile AgnUnitTest] [compile AgnUtils] [compile ParsEval] [compile CanonGFF3] [compile LocusPocus] [compile GAEVAL] [compile Xtractore] [compile bin/pmrna] [compile bin/tidygff3] [create libaegean] [compile unit tests] ar: `u' modifier ignored since `D' is the default (see `U') ar: creating libaegean.a make[2]: Leaving directory '/build/aegean-0.16.0+dfsg' make[1]: Leaving directory '/build/aegean-0.16.0+dfsg' debian/rules override_dh_auto_test make[1]: Entering directory '/build/aegean-0.16.0+dfsg' dh_auto_test -- useshared=yes 64bit=no testthreads=5 make -j3 test useshared=yes 64bit=no testthreads=5 make[2]: Entering directory '/build/aegean-0.16.0+dfsg' AEGeAn Unit Tests AEGeAn::AgnAttributeFilterStream | SUCCESS | Pogonomyrmex barbatus (partial) | PASS AEGeAn::AgnPseudogeneFixVisitor | SUCCESS | Gene, no pseudo attribute | PASS | Gene, bogus pseudo attribute | PASS | Corrected pseudogene | PASS | Uncorrected pseudogene | PASS | iLocus with gene & pseudogene | PASS AEGeAn::AgnInferParentStream | SUCCESS | Test 1: basic | PASS | Test 2: 2 top-level | PASS | Test 3: 2 top-level, inferred parent | PASS | Test 4: multichild | PASS | Test 5: multichild, inferred parent | PASS AEGeAn::AgnMrnaRepVisitor | SUCCESS | TAIR10: test 1 | PASS AEGeAn::AgnRemoveChildrenVisitor | SUCCESS | Test 1: grape (Gaze) | PASS AEGeAn::AgnTranscriptClique | SUCCESS | simple check | PASS | two mRNAs | PASS | copy check | PASS AEGeAn::AgnCliquePair | SUCCESS | perfect match vs. self | PASS | CDS match | PASS | non-match | PASS AEGeAn::AgnLocus | SUCCESS | grape test 1 | PASS | grape test 2 | PASS | filter by CDS length | PASS | filter by exon number | PASS AEGeAn::AgnFilterStream | SUCCESS | mRNA | PASS | exon | PASS | CDS | PASS | intron | PASS | exon+intron | PASS | CDS+intron | PASS AEGeAn::AgnInferCDSVisitor | SUCCESS | grape test sans UTRs | PASS | grape test with UTRs, strand check | PASS | grape test 3 | PASS | grape test 4 | PASS AEGeAn::AgnInferExonsVisitor | SUCCESS | grape test sans UTRs | PASS | grape test with UTRs, strand check | PASS | grape test 3 | PASS | grape test 4 | PASS AEGeAn::AgnGeneStream | SUCCESS | 1 gene, 2 mRNAs | PASS | 1 gene, 2 mRNAs (one sans CDS) | PASS | mRNA only | PASS | mRNA boundaries | PASS AEGeAn::AgnLocusStream | SUCCESS | grape test (pairwise) | PASS | Pdom test (pairwise) | PASS | Amel test (Augustus) | PASS | Delta=200 | PASS AEGeAn::AgnLocusRefineStream | SUCCESS | Atta cephalotes (syndrome): coords | PASS | Atta cephalotes (syndrome): elen | PASS | Megachile rotundata CST: coords | PASS | Megachile rotundata CST: elen | PASS AEGeAn::AgnGaevalVisitor | SUCCESS | range intersect (1) | PASS | range intersect (2) | PASS | range intersect (3) | PASS | union (1) | PASS | union (2) | PASS | union (3) | PASS | intersect (1) | PASS | intersect (2) | PASS | intersect (3) | PASS | intersect (4) | PASS | intersect (5) | PASS | calculate coverage | PASS | introns confirmed (no gaps) | PASS | introns confirmed (gaps) | PASS | calculate integrity | PASS ===== Unit tests passed for all 15 classes! ===== AEGeAn Functional Tests GFF3 I/O: 'AT1G05320' | codons | PASS | sansexons | PASS | sansutrs | PASS | withprot | PASS GFF3 I/O: 'FBgn0035002' | codons | PASS | sansexons | PASS | sansutrs | PASS AEGeAn::LocusPocus | default | PASS | end skip | PASS | Apis mellifera plap | PASS | Apis mellifera plap (CDS) | PASS | Apis mellifera LSM | PASS | Megachile rotundata CST (intron) | PASS | iiLocus lengths (Amel OGS Group7.16) | PASS | Nasonia vitripennis (intron gene) | PASS | A. echinatior (intron gene + ncRNA) | PASS AEGeAn::Xtractore | major royal jelly | PASS AEGeAn::CanonGFF3 | A. mellifera gene multitrans | PASS AEGeAn::GAEVAL | sans CDS | PASS | Pdom | PASS AEGeAn::ParsEval | Amel Group7.16 (text) | PASS | Amel Group7.16 (delta=500) | PASS | Amel Group7.16 (HTML) | PASS AEGeAn::align-convert.py | GAEVAL example1 | PASS | GAEVAL example5 | PASS AEGeAn::pmrna | A. mellifera Shal | PASS | A. mellifera dock | PASS | A. mellifera pseudo | PASS AEGeAn::tidygff3 | A. dorsata exception | PASS make[2]: Leaving directory '/build/aegean-0.16.0+dfsg' make[1]: Leaving directory '/build/aegean-0.16.0+dfsg' create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary dh binary dh_testroot dh_prep debian/rules override_dh_auto_install make[1]: Entering directory '/build/aegean-0.16.0+dfsg' dh_auto_install -- 64bit=no prefix=/build/aegean-0.16.0+dfsg/debian/tmp make -j3 install DESTDIR=/build/aegean-0.16.0\+dfsg/debian/aegean AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" 64bit=no prefix=/build/aegean-0.16.0\+dfsg/debian/tmp make[2]: Entering directory '/build/aegean-0.16.0+dfsg' cp bin/parseval bin/canon-gff3 bin/locuspocus bin/gaeval bin/xtractore bin/pmrna bin/tidygff3 /build/aegean-0.16.0+dfsg/debian/tmp/bin/. cp libaegean.a /build/aegean-0.16.0+dfsg/debian/tmp/lib/. cp inc/core/*.h /build/aegean-0.16.0+dfsg/debian/tmp/include/aegean/. cp -r data/share/* /build/aegean-0.16.0+dfsg/debian/tmp/share/aegean/. make[2]: Leaving directory '/build/aegean-0.16.0+dfsg' make[1]: Leaving directory '/build/aegean-0.16.0+dfsg' dh_install debian/rules override_dh_installdocs make[1]: Entering directory '/build/aegean-0.16.0+dfsg' cp /build/aegean-0.16.0+dfsg/README.md /build/aegean-0.16.0+dfsg/README dh_installdocs make[1]: Leaving directory '/build/aegean-0.16.0+dfsg' dh_installchangelogs dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_missing: warning: bin/canon-gff3 exists in debian/tmp but is not installed to anywhere (related file: "bin/canon-gff3") dh_missing: warning: bin/gaeval exists in debian/tmp but is not installed to anywhere (related file: "bin/gaeval") dh_missing: warning: bin/locuspocus exists in debian/tmp but is not installed to anywhere (related file: "bin/locuspocus") dh_missing: warning: bin/parseval exists in debian/tmp but is not installed to anywhere (related file: "bin/parseval") dh_missing: warning: bin/pmrna exists in debian/tmp but is not installed to anywhere (related file: "bin/pmrna") dh_missing: warning: bin/tidygff3 exists in debian/tmp but is not installed to anywhere (related file: "bin/tidygff3") dh_missing: warning: bin/xtractore exists in debian/tmp but is not installed to anywhere (related file: "bin/xtractore") dh_missing: warning: include/aegean/AgnAttributeFilterStream.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: include/aegean/AgnCliquePair.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: include/aegean/AgnCompareReportHTML.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: include/aegean/AgnCompareReportText.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: include/aegean/AgnComparison.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: include/aegean/AgnFilterStream.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: include/aegean/AgnGaevalVisitor.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: include/aegean/AgnGeneStream.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: include/aegean/AgnInferCDSVisitor.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: include/aegean/AgnInferExonsVisitor.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: include/aegean/AgnInferParentStream.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: include/aegean/AgnLocus.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: include/aegean/AgnLocusFilterStream.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: include/aegean/AgnLocusMapVisitor.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: include/aegean/AgnLocusRefineStream.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: include/aegean/AgnLocusStream.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: include/aegean/AgnMrnaRepVisitor.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: include/aegean/AgnPseudogeneFixVisitor.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: include/aegean/AgnRemoveChildrenVisitor.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: include/aegean/AgnTranscriptClique.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: include/aegean/AgnTypecheck.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: include/aegean/AgnUnitTest.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: include/aegean/AgnUtils.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: include/aegean/AgnVersion.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: include/aegean/aegean.h exists in debian/tmp but is not installed to anywhere dh_missing: warning: lib/libaegean.a exists in debian/tmp but is not installed to anywhere While detecting missing files, dh_missing noted some files with a similar name to those that were missing. This warning /might/ be resolved by replacing references to the missing files with the similarly named ones that dh_missing found - assuming the content is identical. As an example, you might want to replace: * bin/canon-gff3 with: * bin/canon-gff3 in a file in debian/ or as argument to one of the dh_* tools called from debian/rules. (Note it is possible the paths are not used verbatim but instead directories containing or globs matching them are used instead) Alternatively, add the missing file to debian/not-installed if it cannot and should not be used. The following debhelper tools have reported what they installed (with files per package) * dh_install: aegean (8) * dh_installdocs: aegean (1) * dh_installman: aegean (7) If the missing files are installed by another tool, please file a bug against it. When filing the report, if the tool is not part of debhelper itself, please reference the "Logging helpers and dh_missing" section from the "PROGRAMMING" guide for debhelper (10.6.3+). (in the debhelper package: /usr/share/doc/debhelper/PROGRAMMING.gz) Be sure to test with dpkg-buildpackage -A/-B as the results may vary when only a subset is built If the omission is intentional or no other helper can take care of this consider adding the paths to debian/not-installed. dh_dwz dh_strip dh_makeshlibs dh_shlibdeps dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'aegean' in '../aegean_0.16.0+dfsg-2_armhf.deb'. dpkg-deb: building package 'aegean-dbgsym' in '../aegean-dbgsym_0.16.0+dfsg-2_armhf.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../aegean_0.16.0+dfsg-2_armhf.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/13225 and its subdirectories I: Current time: Sat Sep 11 07:01:05 -12 2021 I: pbuilder-time-stamp: 1631386865 Sat Sep 11 19:01:14 UTC 2021 I: 1st build successful. Starting 2nd build on remote node ff64a-armhf-rb.debian.net. Sat Sep 11 19:01:14 UTC 2021 I: Preparing to do remote build '2' on ff64a-armhf-rb.debian.net. Sat Sep 11 19:07:46 UTC 2021 I: Deleting $TMPDIR on ff64a-armhf-rb.debian.net. Sat Sep 11 19:07:48 UTC 2021 I: aegean_0.16.0+dfsg-2_armhf.changes: Format: 1.8 Date: Mon, 09 Sep 2019 18:52:15 +0200 Source: aegean Binary: aegean aegean-dbgsym Architecture: armhf Version: 0.16.0+dfsg-2 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Sascha Steinbiss Description: aegean - integrated genome analysis toolkit Closes: 936109 Changes: aegean (0.16.0+dfsg-2) unstable; urgency=medium . [ Jelmer Vernooij ] * Move source package lintian overrides to debian/source. . [ Andreas Tille ] * Standards-Version: 4.4.0 * Respect DEB_BUILD_OPTIONS in override_dh_auto_test target * Do not parse d/changelog * Use 2to3 to convert from Python2 to Python3 Closes: #936109 * Drop git from Build-Depends * Drop redundant debian/README.source * debhelper-compat 12 * Use secure URI in Homepage field. * Set fields Upstream-Contact in debian/copyright. * Remove obsolete fields Name, Contact from debian/upstream/metadata. Checksums-Sha1: 85e6188fb0c9852ed1c2f04b95cab400a2fe626d 1230604 aegean-dbgsym_0.16.0+dfsg-2_armhf.deb 06eeb18544864285453d75e3eb7fb7d5f908d3a8 7852 aegean_0.16.0+dfsg-2_armhf.buildinfo 3057a570a3110f0c632112a5b7369b039b7b5dc6 179080 aegean_0.16.0+dfsg-2_armhf.deb Checksums-Sha256: 008017751cda150691c649bec05a148e370fac2332f713d490d560c1ae9f9e59 1230604 aegean-dbgsym_0.16.0+dfsg-2_armhf.deb e5065b7a706f4db4d15806cf1a82a8c32bf1196a767bdb33e2c2e76e9028051b 7852 aegean_0.16.0+dfsg-2_armhf.buildinfo c2b9bc827ac89bb42b8bfe8756dc46e13e1bc821b8e91abe44351af3e2104075 179080 aegean_0.16.0+dfsg-2_armhf.deb Files: dac852d437858a96e19c4349aebf408c 1230604 debug optional aegean-dbgsym_0.16.0+dfsg-2_armhf.deb 8bce1958661bf4fa7842944c64b43f98 7852 science optional aegean_0.16.0+dfsg-2_armhf.buildinfo f855f4aa22d3d25d997e9fa23a6b9d21 179080 science optional aegean_0.16.0+dfsg-2_armhf.deb Sat Sep 11 19:07:55 UTC 2021 I: diffoscope 177 will be used to compare the two builds: # Profiling output for: /usr/bin/diffoscope --html /srv/reproducible-results/rbuild-debian/tmp.LHNOotyUy4/aegean_0.16.0+dfsg-2.diffoscope.html --text /srv/reproducible-results/rbuild-debian/tmp.LHNOotyUy4/aegean_0.16.0+dfsg-2.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/tmp.LHNOotyUy4/aegean_0.16.0+dfsg-2.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/tmp.LHNOotyUy4/b1/aegean_0.16.0+dfsg-2_armhf.changes /srv/reproducible-results/rbuild-debian/tmp.LHNOotyUy4/b2/aegean_0.16.0+dfsg-2_armhf.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 2.889s) 2.889s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.036s) 0.036s 10 calls diffoscope.comparators.binary.FilesystemFile 0.000s 8 calls abc.DotChangesFile Sat Sep 11 19:08:02 UTC 2021 I: diffoscope 177 found no differences in the changes files, and a .buildinfo file also exists. Sat Sep 11 19:08:02 UTC 2021 I: aegean from bullseye built successfully and reproducibly on armhf. Sat Sep 11 19:08:05 UTC 2021 I: Submitting .buildinfo files to external archives: Sat Sep 11 19:08:05 UTC 2021 I: Submitting 12K b1/aegean_0.16.0+dfsg-2_armhf.buildinfo.asc Sat Sep 11 19:08:06 UTC 2021 I: Submitting 12K b2/aegean_0.16.0+dfsg-2_armhf.buildinfo.asc Sat Sep 11 19:08:07 UTC 2021 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Sat Sep 11 19:08:07 UTC 2021 I: Done submitting .buildinfo files. Sat Sep 11 19:08:07 UTC 2021 I: Removing signed aegean_0.16.0+dfsg-2_armhf.buildinfo.asc files: removed './b1/aegean_0.16.0+dfsg-2_armhf.buildinfo.asc' removed './b2/aegean_0.16.0+dfsg-2_armhf.buildinfo.asc'