Sat Jul 10 00:45:04 UTC 2021 I: starting to build packmol/bullseye/arm64 on jenkins on '2021-07-10 00:44' Sat Jul 10 00:45:04 UTC 2021 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/arm64_13/2084/console.log Sat Jul 10 00:45:04 UTC 2021 I: Downloading source for bullseye/packmol=20.010-1 --2021-07-10 00:45:04-- http://cdn-fastly.deb.debian.org/debian/pool/main/p/packmol/packmol_20.010-1.dsc Connecting to 78.137.99.97:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 1918 (1.9K) Saving to: ‘packmol_20.010-1.dsc’ 0K . 100% 132M=0s 2021-07-10 00:45:04 (132 MB/s) - ‘packmol_20.010-1.dsc’ saved [1918/1918] Sat Jul 10 00:45:05 UTC 2021 I: packmol_20.010-1.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: packmol Binary: packmol Architecture: any Version: 20.010-1 Maintainer: Debichem Team Uploaders: Drew Parsons Homepage: http://m3g.iqm.unicamp.br/packmol/ Standards-Version: 4.4.1 Vcs-Browser: https://salsa.debian.org/debichem-team/packmol Vcs-Git: https://salsa.debian.org/debichem-team/packmol.git Build-Depends: debhelper-compat (= 12), cmake, gfortran Package-List: packmol deb science optional arch=any Checksums-Sha1: e06f1dd01541102109d0a9da8fe3ed9d173b372c 170626 packmol_20.010.orig.tar.gz e691e0153057208b26ca65d49fabd4b4ee8c84c2 2660 packmol_20.010-1.debian.tar.xz Checksums-Sha256: 23285f2a9e2bef0e8253250d7eae2d4026a9535ddcc2b9b383f5ad45b19e123d 170626 packmol_20.010.orig.tar.gz f0a6f4fbcd7110e41d435e1858b0a3ae02f47384844c9145b64c4e0135dedb07 2660 packmol_20.010-1.debian.tar.xz Files: d5dee904e8941fd5d8d12f7db751d6c4 170626 packmol_20.010.orig.tar.gz a16a28359266abb59364771ebb6d599f 2660 packmol_20.010-1.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQIzBAEBCAAdFiEEI8mpPlhYGekSbQo2Vz7x5L1aAfoFAl4lFqEACgkQVz7x5L1a Afq+lBAAmFYMssDRRXV/Mq3sQ0Zc02sZMqM3qNCcv4Bc26JVXF63pLoqYM0rmzzL LCFeJVee0ElEjGZ82PQPMdCtuy9+F8pWc7KKtcklFY1g5NxMaN9lydTVKBfmiRFo PT8/lUfiJ1atDJGQ/ppxmvvkr9MHRy5wIVIAzCv2nJ6Iec+dr+OmAc8wetVS0NZE kgd8r/3uocM/nlt6AjdUqzwoQcLgoX5YBO/0nksx1tpNXj4nGDdcryS2CllTL2vv VXjti7nq1ux4jXdNaL9zD33grIvb7JM1SrCuvHW4l2XDUJR8Ou4v5+IiPBwqU+wS qFdxDSe/qbkaN0f2sQyLG16BF6svyY8U6MUhIbky4LtvSVmtdFFpuRTGS86JRoNv kkqOByEDETp9B2HD2m0CqQki9u/3QWXFG3PAPMSa0NNW+KnEj0Im2NI3zqZCTSyw ag5jjLlumxiKypQKrqcOXP4ISx3pHAum8muOs74GdGPccXS5Y1MGdy1+cS/4vHRX psqqJ5BqbehTXb8ofAytgLle5nt3bZh6hcftXgqViubp4UVGGfXVR/DtxoIkk2i+ KJhutLltvntwC/eFZP1JRaZ5k2AEI7bc/jMEasAa0up0XAOQLIGJtqrYU5Dap63N jnrvVXf9HnY3U0Wx0IgGHF5U1JEdig0uxi1SbZ1uO9DZdUJB35E= =HVaj -----END PGP SIGNATURE----- Sat Jul 10 00:45:05 UTC 2021 I: Checking whether the package is not for us Sat Jul 10 00:45:05 UTC 2021 I: Starting 1st build on remote node codethink12-arm64.debian.net. Sat Jul 10 00:45:05 UTC 2021 I: Preparing to do remote build '1' on codethink12-arm64.debian.net. Sat Jul 10 00:46:19 UTC 2021 I: Deleting $TMPDIR on codethink12-arm64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Fri Jul 9 12:45:08 -12 2021 I: pbuilder-time-stamp: 1625877908 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bullseye-reproducible-base.tgz] I: copying local configuration I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [packmol_20.010-1.dsc] I: copying [./packmol_20.010.orig.tar.gz] I: copying [./packmol_20.010-1.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/tmp/dpkg-verify-sig.Ydyuksvb/trustedkeys.kbx': General error gpgv: Signature made Sun Jan 19 14:55:29 2020 -12 gpgv: using RSA key 23C9A93E585819E9126D0A36573EF1E4BD5A01FA gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./packmol_20.010-1.dsc dpkg-source: info: extracting packmol in packmol-20.010 dpkg-source: info: unpacking packmol_20.010.orig.tar.gz dpkg-source: info: unpacking packmol_20.010-1.debian.tar.xz I: using fakeroot in build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/19362/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='arm64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=8' DISTRIBUTION='' HOME='/var/lib/jenkins' HOST_ARCH='arm64' IFS=' ' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='19362' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.fHFrOzHAvT/pbuilderrc_rV1b --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.fHFrOzHAvT/b1 --logfile b1/build.log packmol_20.010-1.dsc' SUDO_GID='117' SUDO_UID='110' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' USERNAME='root' _='/usr/bin/systemd-run' http_proxy='http://192.168.101.16:3128' I: uname -a Linux codethink12-arm64 4.15.0-147-generic #151-Ubuntu SMP Fri Jun 18 19:18:37 UTC 2021 aarch64 GNU/Linux I: ls -l /bin total 5252 -rwxr-xr-x 1 root root 1282512 Jun 21 14:26 bash -rwxr-xr-x 3 root root 34808 Jul 20 2020 bunzip2 -rwxr-xr-x 3 root root 34808 Jul 20 2020 bzcat lrwxrwxrwx 1 root root 6 Jul 20 2020 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2225 Jul 20 2020 bzdiff lrwxrwxrwx 1 root root 6 Jul 20 2020 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4877 Sep 4 2019 bzexe lrwxrwxrwx 1 root root 6 Jul 20 2020 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3775 Jul 20 2020 bzgrep -rwxr-xr-x 3 root root 34808 Jul 20 2020 bzip2 -rwxr-xr-x 1 root root 14264 Jul 20 2020 bzip2recover lrwxrwxrwx 1 root root 6 Jul 20 2020 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Jul 20 2020 bzmore -rwxr-xr-x 1 root root 39832 Sep 22 2020 cat -rwxr-xr-x 1 root root 64512 Sep 22 2020 chgrp -rwxr-xr-x 1 root root 60368 Sep 22 2020 chmod -rwxr-xr-x 1 root root 64528 Sep 22 2020 chown -rwxr-xr-x 1 root root 138896 Sep 22 2020 cp -rwxr-xr-x 1 root root 129544 Dec 10 2020 dash -rwxr-xr-x 1 root root 101384 Sep 22 2020 date -rwxr-xr-x 1 root root 80984 Sep 22 2020 dd -rwxr-xr-x 1 root root 89824 Sep 22 2020 df -rwxr-xr-x 1 root root 143088 Sep 22 2020 dir -rwxr-xr-x 1 root root 76152 Feb 7 02:38 dmesg lrwxrwxrwx 1 root root 8 Nov 6 2019 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Nov 6 2019 domainname -> hostname -rwxr-xr-x 1 root root 35632 Sep 22 2020 echo -rwxr-xr-x 1 root root 28 Nov 9 2020 egrep -rwxr-xr-x 1 root root 31512 Sep 22 2020 false -rwxr-xr-x 1 root root 28 Nov 9 2020 fgrep -rwxr-xr-x 1 root root 64856 Feb 7 02:38 findmnt -rwsr-xr-x 1 root root 34824 Feb 26 04:12 fusermount -rwxr-xr-x 1 root root 178400 Nov 9 2020 grep -rwxr-xr-x 2 root root 2346 Mar 2 11:30 gunzip -rwxr-xr-x 1 root root 6376 Mar 2 11:30 gzexe -rwxr-xr-x 1 root root 93744 Mar 2 11:30 gzip -rwxr-xr-x 1 root root 18440 Nov 6 2019 hostname -rwxr-xr-x 1 root root 68720 Sep 22 2020 ln -rwxr-xr-x 1 root root 52720 Feb 7 2020 login -rwxr-xr-x 1 root root 143088 Sep 22 2020 ls -rwxr-xr-x 1 root root 161960 Feb 7 02:38 lsblk -rwxr-xr-x 1 root root 85200 Sep 22 2020 mkdir -rwxr-xr-x 1 root root 68744 Sep 22 2020 mknod -rwxr-xr-x 1 root root 43976 Sep 22 2020 mktemp -rwxr-xr-x 1 root root 51368 Feb 7 02:38 more -rwsr-xr-x 1 root root 51360 Feb 7 02:38 mount -rwxr-xr-x 1 root root 14496 Feb 7 02:38 mountpoint -rwxr-xr-x 1 root root 134808 Sep 22 2020 mv lrwxrwxrwx 1 root root 8 Nov 6 2019 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Apr 18 03:38 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 35720 Sep 22 2020 pwd lrwxrwxrwx 1 root root 4 Jun 21 14:26 rbash -> bash -rwxr-xr-x 1 root root 43872 Sep 22 2020 readlink -rwxr-xr-x 1 root root 68592 Sep 22 2020 rm -rwxr-xr-x 1 root root 43880 Sep 22 2020 rmdir -rwxr-xr-x 1 root root 19208 Sep 27 2020 run-parts -rwxr-xr-x 1 root root 114016 Dec 22 2018 sed lrwxrwxrwx 1 root root 4 Jul 8 21:25 sh -> dash -rwxr-xr-x 1 root root 35656 Sep 22 2020 sleep -rwxr-xr-x 1 root root 72640 Sep 22 2020 stty -rwsr-xr-x 1 root root 67776 Feb 7 02:38 su -rwxr-xr-x 1 root root 35672 Sep 22 2020 sync -rwxr-xr-x 1 root root 535768 Feb 16 21:55 tar -rwxr-xr-x 1 root root 10568 Sep 27 2020 tempfile -rwxr-xr-x 1 root root 89120 Sep 22 2020 touch -rwxr-xr-x 1 root root 31512 Sep 22 2020 true -rwxr-xr-x 1 root root 14264 Feb 26 04:12 ulockmgr_server -rwsr-xr-x 1 root root 30880 Feb 7 02:38 umount -rwxr-xr-x 1 root root 35640 Sep 22 2020 uname -rwxr-xr-x 2 root root 2346 Mar 2 11:30 uncompress -rwxr-xr-x 1 root root 143088 Sep 22 2020 vdir -rwxr-xr-x 1 root root 59584 Feb 7 02:38 wdctl lrwxrwxrwx 1 root root 8 Nov 6 2019 ypdomainname -> hostname -rwxr-xr-x 1 root root 1984 Mar 2 11:30 zcat -rwxr-xr-x 1 root root 1678 Mar 2 11:30 zcmp -rwxr-xr-x 1 root root 5880 Mar 2 11:30 zdiff -rwxr-xr-x 1 root root 29 Mar 2 11:30 zegrep -rwxr-xr-x 1 root root 29 Mar 2 11:30 zfgrep -rwxr-xr-x 1 root root 2081 Mar 2 11:30 zforce -rwxr-xr-x 1 root root 7585 Mar 2 11:30 zgrep -rwxr-xr-x 1 root root 2206 Mar 2 11:30 zless -rwxr-xr-x 1 root root 1842 Mar 2 11:30 zmore -rwxr-xr-x 1 root root 4553 Mar 2 11:30 znew I: user script /srv/workspace/pbuilder/19362/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: arm64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 12), cmake, gfortran dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19646 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 12); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on cmake; however: Package cmake is not installed. pbuilder-satisfydepends-dummy depends on gfortran; however: Package gfortran is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} cmake{a} cmake-data{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} gfortran{a} gfortran-10{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libarchive13{a} libbrotli1{a} libcurl4{a} libdebhelper-perl{a} libelf1{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libgfortran-10-dev{a} libgfortran5{a} libicu67{a} libjsoncpp24{a} libldap-2.4-2{a} libmagic-mgc{a} libmagic1{a} libncurses6{a} libnghttp2-14{a} libpipeline1{a} libprocps8{a} libpsl5{a} librhash0{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libsigsegv2{a} libssh2-1{a} libsub-override-perl{a} libtool{a} libuchardet0{a} libuv1{a} libxml2{a} m4{a} man-db{a} po-debconf{a} procps{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl libarchive-cpio-perl libgpm2 libldap-common libltdl-dev libmail-sendmail-perl libsasl2-modules lynx psmisc publicsuffix wget 0 packages upgraded, 54 newly installed, 0 to remove and 0 not upgraded. Need to get 35.4 MB of archives. After unpacking 134 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian bullseye/main arm64 bsdextrautils arm64 2.36.1-7 [141 kB] Get: 2 http://deb.debian.org/debian bullseye/main arm64 libuchardet0 arm64 0.0.7-1 [67.9 kB] Get: 3 http://deb.debian.org/debian bullseye/main arm64 groff-base arm64 1.22.4-6 [883 kB] Get: 4 http://deb.debian.org/debian bullseye/main arm64 libpipeline1 arm64 1.5.3-1 [33.0 kB] Get: 5 http://deb.debian.org/debian bullseye/main arm64 man-db arm64 2.9.4-2 [1336 kB] Get: 6 http://deb.debian.org/debian bullseye/main arm64 libncurses6 arm64 6.2+20201114-2 [93.2 kB] Get: 7 http://deb.debian.org/debian bullseye/main arm64 libprocps8 arm64 2:3.3.17-5 [61.9 kB] Get: 8 http://deb.debian.org/debian bullseye/main arm64 procps arm64 2:3.3.17-5 [497 kB] Get: 9 http://deb.debian.org/debian bullseye/main arm64 sensible-utils all 0.0.14 [14.8 kB] Get: 10 http://deb.debian.org/debian bullseye/main arm64 libmagic-mgc arm64 1:5.39-3 [273 kB] Get: 11 http://deb.debian.org/debian bullseye/main arm64 libmagic1 arm64 1:5.39-3 [121 kB] Get: 12 http://deb.debian.org/debian bullseye/main arm64 file arm64 1:5.39-3 [69.1 kB] Get: 13 http://deb.debian.org/debian bullseye/main arm64 gettext-base arm64 0.21-4 [173 kB] Get: 14 http://deb.debian.org/debian bullseye/main arm64 libsigsegv2 arm64 2.13-1 [34.7 kB] Get: 15 http://deb.debian.org/debian bullseye/main arm64 m4 arm64 1.4.18-5 [199 kB] Get: 16 http://deb.debian.org/debian bullseye/main arm64 autoconf all 2.69-14 [313 kB] Get: 17 http://deb.debian.org/debian bullseye/main arm64 autotools-dev all 20180224.1+nmu1 [77.1 kB] Get: 18 http://deb.debian.org/debian bullseye/main arm64 automake all 1:1.16.3-2 [814 kB] Get: 19 http://deb.debian.org/debian bullseye/main arm64 autopoint all 0.21-4 [510 kB] Get: 20 http://deb.debian.org/debian bullseye/main arm64 cmake-data all 3.18.4-2 [1725 kB] Get: 21 http://deb.debian.org/debian bullseye/main arm64 libicu67 arm64 67.1-7 [8467 kB] Get: 22 http://deb.debian.org/debian bullseye/main arm64 libxml2 arm64 2.9.10+dfsg-6.7 [629 kB] Get: 23 http://deb.debian.org/debian bullseye/main arm64 libarchive13 arm64 3.4.3-2+b1 [320 kB] Get: 24 http://deb.debian.org/debian bullseye/main arm64 libbrotli1 arm64 1.0.9-2+b2 [267 kB] Get: 25 http://deb.debian.org/debian bullseye/main arm64 libsasl2-modules-db arm64 2.1.27+dfsg-2.1 [69.3 kB] Get: 26 http://deb.debian.org/debian bullseye/main arm64 libsasl2-2 arm64 2.1.27+dfsg-2.1 [105 kB] Get: 27 http://deb.debian.org/debian bullseye/main arm64 libldap-2.4-2 arm64 2.4.57+dfsg-3 [222 kB] Get: 28 http://deb.debian.org/debian bullseye/main arm64 libnghttp2-14 arm64 1.43.0-1 [73.8 kB] Get: 29 http://deb.debian.org/debian bullseye/main arm64 libpsl5 arm64 0.21.0-1.2 [57.1 kB] Get: 30 http://deb.debian.org/debian bullseye/main arm64 librtmp1 arm64 2.4+20151223.gitfa8646d.1-2+b2 [59.4 kB] Get: 31 http://deb.debian.org/debian bullseye/main arm64 libssh2-1 arm64 1.9.0-2 [150 kB] Get: 32 http://deb.debian.org/debian bullseye/main arm64 libcurl4 arm64 7.74.0-1.3+b1 [321 kB] Get: 33 http://deb.debian.org/debian bullseye/main arm64 libexpat1 arm64 2.2.10-2 [83.1 kB] Get: 34 http://deb.debian.org/debian bullseye/main arm64 libjsoncpp24 arm64 1.9.4-4 [72.5 kB] Get: 35 http://deb.debian.org/debian bullseye/main arm64 librhash0 arm64 1.4.1-2 [127 kB] Get: 36 http://deb.debian.org/debian bullseye/main arm64 libuv1 arm64 1.40.0-2 [126 kB] Get: 37 http://deb.debian.org/debian bullseye/main arm64 cmake arm64 3.18.4-2 [3673 kB] Get: 38 http://deb.debian.org/debian bullseye/main arm64 libdebhelper-perl all 13.3.4 [189 kB] Get: 39 http://deb.debian.org/debian bullseye/main arm64 libtool all 2.4.6-15 [513 kB] Get: 40 http://deb.debian.org/debian bullseye/main arm64 dh-autoreconf all 20 [17.1 kB] Get: 41 http://deb.debian.org/debian bullseye/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 42 http://deb.debian.org/debian bullseye/main arm64 libsub-override-perl all 0.09-2 [10.2 kB] Get: 43 http://deb.debian.org/debian bullseye/main arm64 libfile-stripnondeterminism-perl all 1.11.0-1 [25.6 kB] Get: 44 http://deb.debian.org/debian bullseye/main arm64 dh-strip-nondeterminism all 1.11.0-1 [15.3 kB] Get: 45 http://deb.debian.org/debian bullseye/main arm64 libelf1 arm64 0.183-1 [164 kB] Get: 46 http://deb.debian.org/debian bullseye/main arm64 dwz arm64 0.13+20210201-1 [155 kB] Get: 47 http://deb.debian.org/debian bullseye/main arm64 gettext arm64 0.21-4 [1261 kB] Get: 48 http://deb.debian.org/debian bullseye/main arm64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get: 49 http://deb.debian.org/debian bullseye/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 50 http://deb.debian.org/debian bullseye/main arm64 debhelper all 13.3.4 [1049 kB] Get: 51 http://deb.debian.org/debian bullseye/main arm64 libgfortran5 arm64 10.2.1-6 [333 kB] Get: 52 http://deb.debian.org/debian bullseye/main arm64 libgfortran-10-dev arm64 10.2.1-6 [388 kB] Get: 53 http://deb.debian.org/debian bullseye/main arm64 gfortran-10 arm64 10.2.1-6 [8654 kB] Get: 54 http://deb.debian.org/debian bullseye/main arm64 gfortran arm64 4:10.2.1-1 [1424 B] Fetched 35.4 MB in 1s (49.9 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package bsdextrautils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19646 files and directories currently installed.) Preparing to unpack .../00-bsdextrautils_2.36.1-7_arm64.deb ... Unpacking bsdextrautils (2.36.1-7) ... Selecting previously unselected package libuchardet0:arm64. Preparing to unpack .../01-libuchardet0_0.0.7-1_arm64.deb ... Unpacking libuchardet0:arm64 (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../02-groff-base_1.22.4-6_arm64.deb ... Unpacking groff-base (1.22.4-6) ... Selecting previously unselected package libpipeline1:arm64. Preparing to unpack .../03-libpipeline1_1.5.3-1_arm64.deb ... Unpacking libpipeline1:arm64 (1.5.3-1) ... Selecting previously unselected package man-db. Preparing to unpack .../04-man-db_2.9.4-2_arm64.deb ... Unpacking man-db (2.9.4-2) ... Selecting previously unselected package libncurses6:arm64. Preparing to unpack .../05-libncurses6_6.2+20201114-2_arm64.deb ... Unpacking libncurses6:arm64 (6.2+20201114-2) ... Selecting previously unselected package libprocps8:arm64. Preparing to unpack .../06-libprocps8_2%3a3.3.17-5_arm64.deb ... Unpacking libprocps8:arm64 (2:3.3.17-5) ... Selecting previously unselected package procps. Preparing to unpack .../07-procps_2%3a3.3.17-5_arm64.deb ... Unpacking procps (2:3.3.17-5) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../08-sensible-utils_0.0.14_all.deb ... Unpacking sensible-utils (0.0.14) ... 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Setting up libfile-stripnondeterminism-perl (1.11.0-1) ... Setting up gettext (0.21-4) ... Setting up libtool (2.4.6-15) ... Setting up libarchive13:arm64 (3.4.3-2+b1) ... Setting up libldap-2.4-2:arm64 (2.4.57+dfsg-3) ... Setting up m4 (1.4.18-5) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up gfortran-10 (10.2.1-6) ... Setting up autoconf (2.69-14) ... Setting up dh-strip-nondeterminism (1.11.0-1) ... Setting up dwz (0.13+20210201-1) ... Setting up groff-base (1.22.4-6) ... Setting up procps (2:3.3.17-5) ... Setting up libcurl4:arm64 (7.74.0-1.3+b1) ... Setting up automake (1:1.16.3-2) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.9.4-2) ... Not building database; man-db/auto-update is not 'true'. 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I: Building the package I: Running cd /build/packmol-20.010/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../packmol_20.010-1_source.changes dpkg-buildpackage: info: source package packmol dpkg-buildpackage: info: source version 20.010-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Drew Parsons dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 fakeroot debian/rules clean dh clean --buildsystem=cmake dh_auto_clean -O--buildsystem=cmake dh_autoreconf_clean -O--buildsystem=cmake dh_clean -O--buildsystem=cmake debian/rules build dh build --buildsystem=cmake dh_update_autotools_config -O--buildsystem=cmake dh_autoreconf -O--buildsystem=cmake dh_auto_configure -O--buildsystem=cmake cd obj-aarch64-linux-gnu && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/aarch64-linux-gnu .. -- The Fortran compiler identification is GNU 10.2.1 -- Detecting Fortran compiler ABI info -- Detecting Fortran compiler ABI info - done -- Check for working Fortran compiler: /usr/bin/f95 - skipped -- Checking whether /usr/bin/f95 supports Fortran 90 -- Checking whether /usr/bin/f95 supports Fortran 90 - yes -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY CMAKE_INSTALL_LIBDIR CMAKE_INSTALL_LOCALSTATEDIR CMAKE_INSTALL_RUNSTATEDIR CMAKE_INSTALL_SYSCONFDIR -- Build files have been written to: /build/packmol-20.010/obj-aarch64-linux-gnu dh_auto_build -O--buildsystem=cmake cd obj-aarch64-linux-gnu && make -j8 "INSTALL=install --strip-program=true" VERBOSE=1 make[1]: Entering directory '/build/packmol-20.010/obj-aarch64-linux-gnu' /usr/bin/cmake -S/build/packmol-20.010 -B/build/packmol-20.010/obj-aarch64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/packmol-20.010/obj-aarch64-linux-gnu/CMakeFiles /build/packmol-20.010/obj-aarch64-linux-gnu//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/build/packmol-20.010/obj-aarch64-linux-gnu' make -f CMakeFiles/packmol.dir/build.make CMakeFiles/packmol.dir/depend make[3]: Entering directory '/build/packmol-20.010/obj-aarch64-linux-gnu' cd /build/packmol-20.010/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/packmol-20.010 /build/packmol-20.010 /build/packmol-20.010/obj-aarch64-linux-gnu /build/packmol-20.010/obj-aarch64-linux-gnu /build/packmol-20.010/obj-aarch64-linux-gnu/CMakeFiles/packmol.dir/DependInfo.cmake --color= Dependee "/build/packmol-20.010/obj-aarch64-linux-gnu/CMakeFiles/packmol.dir/DependInfo.cmake" is newer than depender "/build/packmol-20.010/obj-aarch64-linux-gnu/CMakeFiles/packmol.dir/depend.internal". 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CMakeFiles/packmol.dir/sizes.f90.o.provides.build [ 36%] Building Fortran object CMakeFiles/packmol.dir/input.f90.o /usr/bin/f95 -g -O2 -fdebug-prefix-map=/build/packmol-20.010=. -fstack-protector-strong -Wall -c /build/packmol-20.010/input.f90 -o CMakeFiles/packmol.dir/input.f90.o /usr/bin/cmake -E cmake_copy_f90_mod usegencan.mod CMakeFiles/packmol.dir/usegencan.mod.stamp GNU /usr/bin/cmake -E cmake_copy_f90_mod compute_data.mod CMakeFiles/packmol.dir/compute_data.mod.stamp GNU /build/packmol-20.010/gencan.f:5672:72: 5672 | 95 SUM = SUM + DX(J)**2 | 1 Warning: Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 95 at (1) /usr/bin/cmake -E cmake_copy_f90_mod flashsort.mod CMakeFiles/packmol.dir/flashsort.mod.stamp GNU [ 39%] Building Fortran object CMakeFiles/packmol.dir/title.f90.o /usr/bin/f95 -g -O2 -fdebug-prefix-map=/build/packmol-20.010=. -fstack-protector-strong -Wall -c /build/packmol-20.010/title.f90 -o CMakeFiles/packmol.dir/title.f90.o /build/packmol-20.010/gencan.f:2574:5: 2574 | 1003 format(6X,I6,T22,D17.6,T43,D17.6) | 1 Warning: Label 1003 at (1) defined but not used [-Wunused-label] /build/packmol-20.010/gencan.f:5662:5: 5662 | 110 IF (DABS(DX(I)).LE.XMAX) GO TO 115 | 1 Warning: Label 110 at (1) defined but not used [-Wunused-label] /build/packmol-20.010/gencan.f:5661:5: 5661 | 70 IF (DABS(DX(I)).GT.CUTLO) GO TO 75 | 1 Warning: Label 70 at (1) defined but not used [-Wunused-label] /build/packmol-20.010/gencan.f:5654:5: 5654 | 50 IF (DX(I).EQ.ZERO) GO TO 200 | 1 Warning: Label 50 at (1) defined but not used [-Wunused-label] /build/packmol-20.010/gencan.f:5652:5: 5652 | 30 IF (DABS(DX(I)).GT.CUTLO) GO TO 85 | 1 Warning: Label 30 at (1) defined but not used [-Wunused-label] /usr/bin/cmake -E touch CMakeFiles/packmol.dir/usegencan.f90.o.provides.build /usr/bin/cmake -E cmake_copy_f90_mod input.mod CMakeFiles/packmol.dir/input.mod.stamp GNU /usr/bin/cmake -E touch CMakeFiles/packmol.dir/compute_data.f90.o.provides.build /usr/bin/cmake -E touch CMakeFiles/packmol.dir/flashmod.f90.o.provides.build /build/packmol-20.010/gencan.f:62:37: 62 | subroutine evalnal(n,x,m,lambda,rho,g,flag) | 1 Warning: Unused dummy argument 'lambda' at (1) [-Wunused-dummy-argument] /build/packmol-20.010/gencan.f:62:41: 62 | subroutine evalnal(n,x,m,lambda,rho,g,flag) | 1 Warning: Unused dummy argument 'rho' at (1) [-Wunused-dummy-argument] /build/packmol-20.010/gencan.f:2585:40: 2585 | +steabs,epsrel,epsabs,infrel,infabs) | 1 Warning: Unused dummy argument 'infabs' at (1) [-Wunused-dummy-argument] /build/packmol-20.010/gencan.f:2585:33: 2585 | +steabs,epsrel,epsabs,infrel,infabs) | 1 Warning: Unused dummy argument 'infrel' at (1) [-Wunused-dummy-argument] /build/packmol-20.010/gencan.f:2585:12: 2585 | +steabs,epsrel,epsabs,infrel,infabs) | 1 Warning: Unused dummy argument 'steabs' at (1) [-Wunused-dummy-argument] /build/packmol-20.010/gencan.f:2584:71: 2584 | +fmin,maxfc,iprint,fcnt,inform,xtrial,d,gamma,sigma1,sigma2,sterel, | 1 Warning: Unused dummy argument 'sterel' at (1) [-Wunused-dummy-argument] /build/packmol-20.010/gencan.f:3819:61: 3819 | +sigma1,sigma2,sterel,steabs,epsrel,epsabs,infrel,infabs) | 1 Warning: Unused dummy argument 'infabs' at (1) [-Wunused-dummy-argument] /build/packmol-20.010/gencan.f:3819:54: 3819 | +sigma1,sigma2,sterel,steabs,epsrel,epsabs,infrel,infabs) | 1 Warning: Unused dummy argument 'infrel' at (1) [-Wunused-dummy-argument] /build/packmol-20.010/gencan.f:4:36: 4 | subroutine evalal(n,x,m,lambda,rho,f,flag) | 1 Warning: Unused dummy argument 'lambda' at (1) [-Wunused-dummy-argument] /build/packmol-20.010/gencan.f:4:40: 4 | subroutine evalal(n,x,m,lambda,rho,f,flag) | 1 Warning: Unused dummy argument 'rho' at (1) [-Wunused-dummy-argument] /build/packmol-20.010/gencan.f:2981:19: 2981 | +epsabs,infrel,infabs) | 1 Warning: Unused dummy argument 'infrel' at (1) [-Wunused-dummy-argument] /build/packmol-20.010/gencan.f:5179:19: 5179 | +steabs,inform) | 1 Warning: Unused dummy argument 'inform' at (1) [-Wunused-dummy-argument] /build/packmol-20.010/gencan.f:5178:52: 5178 | subroutine calchd(nind,ind,x,d,g,n,xc,m,lambda,rho,hd,xtmp,sterel, | 1 Warning: Unused dummy argument 'lambda' at (1) [-Wunused-dummy-argument] /build/packmol-20.010/gencan.f:5178:56: 5178 | subroutine calchd(nind,ind,x,d,g,n,xc,m,lambda,rho,hd,xtmp,sterel, | 1 Warning: Unused dummy argument 'rho' at (1) [-Wunused-dummy-argument] /build/packmol-20.010/gencan.f:5179:12: 5179 | +steabs,inform) | 1 Warning: Unused dummy argument 'steabs' at (1) [-Wunused-dummy-argument] /build/packmol-20.010/gencan.f:5178:71: 5178 | subroutine calchd(nind,ind,x,d,g,n,xc,m,lambda,rho,hd,xtmp,sterel, | 1 Warning: Unused dummy argument 'sterel' at (1) [-Wunused-dummy-argument] /build/packmol-20.010/gencan.f:5178:64: 5178 | subroutine calchd(nind,ind,x,d,g,n,xc,m,lambda,rho,hd,xtmp,sterel, | 1 Warning: Unused dummy argument 'xtmp' at (1) [-Wunused-dummy-argument] /build/packmol-20.010/gencan.f:125:25: 125 | subroutine evalhd(n) | 1 Warning: Unused dummy argument 'n' at (1) [-Wunused-dummy-argument] /build/packmol-20.010/gencan.f:525:37: 525 | double precision lastgpns(tmax) | 1 Warning: Array 'lastgpns' at (1) is larger than limit set by '-fmax-stack-var-size=', moved from stack to static storage. This makes the procedure unsafe when called recursively, or concurrently from multiple threads. Consider using '-frecursive', or increase the '-fmax-stack-var-size=' limit, or change the code to use an ALLOCATABLE array. [-Wsurprising] [ 42%] Building Fortran object CMakeFiles/packmol.dir/gparc.f90.o [ 44%] Building Fortran object CMakeFiles/packmol.dir/fparc.f90.o /usr/bin/f95 -g -O2 -fdebug-prefix-map=/build/packmol-20.010=. -fstack-protector-strong -Wall -c /build/packmol-20.010/gparc.f90 -o CMakeFiles/packmol.dir/gparc.f90.o [ 47%] Building Fortran object CMakeFiles/packmol.dir/gwalls.f90.o /usr/bin/f95 -g -O2 -fdebug-prefix-map=/build/packmol-20.010=. -fstack-protector-strong -Wall -c /build/packmol-20.010/fparc.f90 -o CMakeFiles/packmol.dir/fparc.f90.o [ 50%] Building Fortran object CMakeFiles/packmol.dir/comprest.f90.o /usr/bin/f95 -g -O2 -fdebug-prefix-map=/build/packmol-20.010=. -fstack-protector-strong -Wall -c /build/packmol-20.010/gwalls.f90 -o CMakeFiles/packmol.dir/gwalls.f90.o /usr/bin/f95 -g -O2 -fdebug-prefix-map=/build/packmol-20.010=. -fstack-protector-strong -Wall -c /build/packmol-20.010/comprest.f90 -o CMakeFiles/packmol.dir/comprest.f90.o [ 52%] Building Fortran object CMakeFiles/packmol.dir/packmol.f90.o /usr/bin/f95 -g -O2 -fdebug-prefix-map=/build/packmol-20.010=. -fstack-protector-strong -Wall -c /build/packmol-20.010/packmol.f90 -o CMakeFiles/packmol.dir/packmol.f90.o [ 55%] Building Fortran object CMakeFiles/packmol.dir/polartocart.f90.o /usr/bin/f95 -g -O2 -fdebug-prefix-map=/build/packmol-20.010=. -fstack-protector-strong -Wall -c /build/packmol-20.010/polartocart.f90 -o CMakeFiles/packmol.dir/polartocart.f90.o [ 57%] Building Fortran object CMakeFiles/packmol.dir/resetboxes.f90.o /usr/bin/f95 -g -O2 -fdebug-prefix-map=/build/packmol-20.010=. -fstack-protector-strong -Wall -c /build/packmol-20.010/resetboxes.f90 -o CMakeFiles/packmol.dir/resetboxes.f90.o [ 60%] Building Fortran object CMakeFiles/packmol.dir/tobar.f90.o /usr/bin/f95 -g -O2 -fdebug-prefix-map=/build/packmol-20.010=. -fstack-protector-strong -Wall -c /build/packmol-20.010/tobar.f90 -o CMakeFiles/packmol.dir/tobar.f90.o [ 63%] Building Fortran object CMakeFiles/packmol.dir/restmol.f90.o /usr/bin/f95 -g -O2 -fdebug-prefix-map=/build/packmol-20.010=. -fstack-protector-strong -Wall -c /build/packmol-20.010/restmol.f90 -o CMakeFiles/packmol.dir/restmol.f90.o [ 65%] Building Fortran object CMakeFiles/packmol.dir/setijk.f90.o /usr/bin/f95 -g -O2 -fdebug-prefix-map=/build/packmol-20.010=. -fstack-protector-strong -Wall -c /build/packmol-20.010/setijk.f90 -o CMakeFiles/packmol.dir/setijk.f90.o [ 68%] Building Fortran object CMakeFiles/packmol.dir/swaptype.f90.o /usr/bin/f95 -g -O2 -fdebug-prefix-map=/build/packmol-20.010=. -fstack-protector-strong -Wall -c /build/packmol-20.010/swaptype.f90 -o CMakeFiles/packmol.dir/swaptype.f90.o [ 71%] Building Fortran object CMakeFiles/packmol.dir/heuristics.f90.o /usr/bin/f95 -g -O2 -fdebug-prefix-map=/build/packmol-20.010=. -fstack-protector-strong -Wall -c /build/packmol-20.010/heuristics.f90 -o CMakeFiles/packmol.dir/heuristics.f90.o [ 73%] Building Fortran object CMakeFiles/packmol.dir/computef.f90.o /usr/bin/f95 -g -O2 -fdebug-prefix-map=/build/packmol-20.010=. -fstack-protector-strong -Wall -c /build/packmol-20.010/computef.f90 -o CMakeFiles/packmol.dir/computef.f90.o [ 76%] Building Fortran object CMakeFiles/packmol.dir/computeg.f90.o /usr/bin/f95 -g -O2 -fdebug-prefix-map=/build/packmol-20.010=. -fstack-protector-strong -Wall -c /build/packmol-20.010/computeg.f90 -o CMakeFiles/packmol.dir/computeg.f90.o /usr/bin/cmake -E touch CMakeFiles/packmol.dir/input.f90.o.provides.build [ 78%] Building Fortran object CMakeFiles/packmol.dir/cenmass.f90.o /usr/bin/f95 -g -O2 -fdebug-prefix-map=/build/packmol-20.010=. -fstack-protector-strong -Wall -c /build/packmol-20.010/cenmass.f90 -o CMakeFiles/packmol.dir/cenmass.f90.o [ 81%] Building Fortran object CMakeFiles/packmol.dir/pgencan.f90.o /usr/bin/f95 -g -O2 -fdebug-prefix-map=/build/packmol-20.010=. -fstack-protector-strong -Wall -c /build/packmol-20.010/pgencan.f90 -o CMakeFiles/packmol.dir/pgencan.f90.o [ 84%] Building Fortran object CMakeFiles/packmol.dir/initial.f90.o /usr/bin/f95 -g -O2 -fdebug-prefix-map=/build/packmol-20.010=. -fstack-protector-strong -Wall -c /build/packmol-20.010/initial.f90 -o CMakeFiles/packmol.dir/initial.f90.o [ 86%] Building Fortran object CMakeFiles/packmol.dir/setsizes.f90.o /usr/bin/f95 -g -O2 -fdebug-prefix-map=/build/packmol-20.010=. -fstack-protector-strong -Wall -c /build/packmol-20.010/setsizes.f90 -o CMakeFiles/packmol.dir/setsizes.f90.o [ 89%] Building Fortran object CMakeFiles/packmol.dir/output.f90.o /usr/bin/f95 -g -O2 -fdebug-prefix-map=/build/packmol-20.010=. -fstack-protector-strong -Wall -c /build/packmol-20.010/output.f90 -o CMakeFiles/packmol.dir/output.f90.o [ 92%] Building Fortran object CMakeFiles/packmol.dir/getinp.f90.o /usr/bin/f95 -g -O2 -fdebug-prefix-map=/build/packmol-20.010=. -fstack-protector-strong -Wall -c /build/packmol-20.010/getinp.f90 -o CMakeFiles/packmol.dir/getinp.f90.o [ 94%] Building Fortran object CMakeFiles/packmol.dir/checkpoint.f90.o /usr/bin/f95 -g -O2 -fdebug-prefix-map=/build/packmol-20.010=. -fstack-protector-strong -Wall -c /build/packmol-20.010/checkpoint.f90 -o CMakeFiles/packmol.dir/checkpoint.f90.o /build/packmol-20.010/packmol.f90:810:63: 810 | if(flast.gt.0.d0) fimp = -100.d0 * (fx - flast) / flast | ^ Warning: 'flast' may be used uninitialized in this function [-Wmaybe-uninitialized] /build/packmol-20.010/packmol.f90:321:50: 321 | iratom(icart,iratcount) = iirest | ^ Warning: 'iirest' may be used uninitialized in this function [-Wmaybe-uninitialized] [ 97%] Building Fortran object CMakeFiles/packmol.dir/writesuccess.f90.o /usr/bin/f95 -g -O2 -fdebug-prefix-map=/build/packmol-20.010=. -fstack-protector-strong -Wall -c /build/packmol-20.010/writesuccess.f90 -o CMakeFiles/packmol.dir/writesuccess.f90.o /build/packmol-20.010/getinp.f90:887:11: 887 | if(ires.ne.ireslast) then | ^ Warning: 'ireslast' may be used uninitialized in this function [-Wmaybe-uninitialized] /build/packmol-20.010/output.f90:581:32: 581 | nres = ilres - ifres + 1 | ^ Warning: 'ilres' may be used uninitialized in this function [-Wmaybe-uninitialized] /build/packmol-20.010/gencan.f:3346:72: 3346 | beta = rnorm2 / rnorm2prev | ^ Warning: 'rnorm2prev' may be used uninitialized in this function [-Wmaybe-uninitialized] /build/packmol-20.010/gencan.f:3644:72: 3644 | rbdtype = rbdposatype | ^ Warning: 'rbdposatype' may be used uninitialized in this function [-Wmaybe-uninitialized] /build/packmol-20.010/gencan.f:3643:72: 3643 | rbdind = rbdposaind | ^ Warning: 'rbdposaind' may be used uninitialized in this function [-Wmaybe-uninitialized] /build/packmol-20.010/gencan.f:3647:72: 3647 | rbdtype = rbdnegatype | ^ Warning: 'rbdnegatype' may be used uninitialized in this function [-Wmaybe-uninitialized] /build/packmol-20.010/gencan.f:3646:72: 3646 | rbdind = rbdnegaind | ^ Warning: 'rbdnegaind' may be used uninitialized in this function [-Wmaybe-uninitialized] /build/packmol-20.010/gencan.f:3353:72: 3353 | + beta ** 2 * dnorm2 | ^ Warning: 'dtw' may be used uninitialized in this function [-Wmaybe-uninitialized] /build/packmol-20.010/gencan.f:3353:72: Warning: 'dtr' may be used uninitialized in this function [-Wmaybe-uninitialized] /build/packmol-20.010/gencan.f:3353:72: Warning: 'dnorm2' may be used uninitialized in this function [-Wmaybe-uninitialized] /build/packmol-20.010/gencan.f:3495:72: 3495 | amaxn = max( amax1n, amax2n ) | ^ Warning: 'amax1n' may be used uninitialized in this function [-Wmaybe-uninitialized] /build/packmol-20.010/gencan.f:3494:72: 3494 | amax = min( amax1 , amax2 ) | ^ Warning: 'amax1' may be used uninitialized in this function [-Wmaybe-uninitialized] /build/packmol-20.010/gencan.f:3353:72: 3353 | + beta ** 2 * dnorm2 | ^ Warning: 'alpha' may be used uninitialized in this function [-Wmaybe-uninitialized] /build/packmol-20.010/gencan.f:2074:72: 2074 | lamspg = sts / sty | ^ Warning: 'sty' may be used uninitialized in this function [-Wmaybe-uninitialized] /build/packmol-20.010/gencan.f:2137:72: 2137 | delta = max( delmin, 10.0d0 * sqrt( sts ) ) | ^ Warning: 'sts' may be used uninitialized in this function [-Wmaybe-uninitialized] [100%] Linking Fortran executable packmol /usr/bin/cmake -E cmake_link_script CMakeFiles/packmol.dir/link.txt --verbose=1 /usr/bin/f95 -Wl,-z,relro -g -O2 -fdebug-prefix-map=/build/packmol-20.010=. -fstack-protector-strong CMakeFiles/packmol.dir/cenmass.f90.o CMakeFiles/packmol.dir/gencan.f.o CMakeFiles/packmol.dir/pgencan.f90.o CMakeFiles/packmol.dir/initial.f90.o CMakeFiles/packmol.dir/title.f90.o CMakeFiles/packmol.dir/setsizes.f90.o CMakeFiles/packmol.dir/getinp.f90.o CMakeFiles/packmol.dir/strlength.f90.o CMakeFiles/packmol.dir/output.f90.o CMakeFiles/packmol.dir/checkpoint.f90.o CMakeFiles/packmol.dir/writesuccess.f90.o CMakeFiles/packmol.dir/fparc.f90.o CMakeFiles/packmol.dir/gparc.f90.o CMakeFiles/packmol.dir/gwalls.f90.o CMakeFiles/packmol.dir/comprest.f90.o CMakeFiles/packmol.dir/comparegrad.f90.o CMakeFiles/packmol.dir/packmol.f90.o CMakeFiles/packmol.dir/polartocart.f90.o CMakeFiles/packmol.dir/resetboxes.f90.o CMakeFiles/packmol.dir/tobar.f90.o CMakeFiles/packmol.dir/setijk.f90.o CMakeFiles/packmol.dir/setibox.f90.o CMakeFiles/packmol.dir/restmol.f90.o CMakeFiles/packmol.dir/swaptype.f90.o CMakeFiles/packmol.dir/swaptypemod.f90.o CMakeFiles/packmol.dir/ahestetic.f90.o CMakeFiles/packmol.dir/heuristics.f90.o CMakeFiles/packmol.dir/flashsort.f90.o CMakeFiles/packmol.dir/jacobi.f90.o CMakeFiles/packmol.dir/random.f90.o CMakeFiles/packmol.dir/sizes.f90.o CMakeFiles/packmol.dir/usegencan.f90.o CMakeFiles/packmol.dir/compute_data.f90.o CMakeFiles/packmol.dir/flashmod.f90.o CMakeFiles/packmol.dir/computef.f90.o CMakeFiles/packmol.dir/computeg.f90.o CMakeFiles/packmol.dir/input.f90.o -o packmol make[3]: Leaving directory '/build/packmol-20.010/obj-aarch64-linux-gnu' [100%] Built target packmol make[2]: Leaving directory '/build/packmol-20.010/obj-aarch64-linux-gnu' /usr/bin/cmake -E cmake_progress_start /build/packmol-20.010/obj-aarch64-linux-gnu/CMakeFiles 0 make[1]: Leaving directory '/build/packmol-20.010/obj-aarch64-linux-gnu' dh_auto_test -O--buildsystem=cmake create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary dh binary --buildsystem=cmake dh_testroot -O--buildsystem=cmake dh_prep -O--buildsystem=cmake dh_auto_install -O--buildsystem=cmake cd obj-aarch64-linux-gnu && make -j8 install DESTDIR=/build/packmol-20.010/debian/packmol AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/packmol-20.010/obj-aarch64-linux-gnu' /usr/bin/cmake -S/build/packmol-20.010 -B/build/packmol-20.010/obj-aarch64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/packmol-20.010/obj-aarch64-linux-gnu/CMakeFiles /build/packmol-20.010/obj-aarch64-linux-gnu//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/build/packmol-20.010/obj-aarch64-linux-gnu' make -f CMakeFiles/packmol.dir/build.make CMakeFiles/packmol.dir/depend make[3]: Entering directory '/build/packmol-20.010/obj-aarch64-linux-gnu' cd /build/packmol-20.010/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/packmol-20.010 /build/packmol-20.010 /build/packmol-20.010/obj-aarch64-linux-gnu /build/packmol-20.010/obj-aarch64-linux-gnu /build/packmol-20.010/obj-aarch64-linux-gnu/CMakeFiles/packmol.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/packmol-20.010/obj-aarch64-linux-gnu' make -f CMakeFiles/packmol.dir/build.make CMakeFiles/packmol.dir/build make[3]: Entering directory '/build/packmol-20.010/obj-aarch64-linux-gnu' make[3]: Nothing to be done for 'CMakeFiles/packmol.dir/build'. make[3]: Leaving directory '/build/packmol-20.010/obj-aarch64-linux-gnu' [100%] Built target packmol make[2]: Leaving directory '/build/packmol-20.010/obj-aarch64-linux-gnu' /usr/bin/cmake -E cmake_progress_start /build/packmol-20.010/obj-aarch64-linux-gnu/CMakeFiles 0 make -f CMakeFiles/Makefile2 preinstall make[2]: Entering directory '/build/packmol-20.010/obj-aarch64-linux-gnu' make[2]: Nothing to be done for 'preinstall'. make[2]: Leaving directory '/build/packmol-20.010/obj-aarch64-linux-gnu' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "None" -- Installing: /build/packmol-20.010/debian/packmol/usr/bin/packmol make[1]: Leaving directory '/build/packmol-20.010/obj-aarch64-linux-gnu' dh_install -O--buildsystem=cmake dh_installdocs -O--buildsystem=cmake dh_installchangelogs -O--buildsystem=cmake dh_installinit -O--buildsystem=cmake dh_installsystemduser -O--buildsystem=cmake dh_lintian -O--buildsystem=cmake dh_perl -O--buildsystem=cmake dh_link -O--buildsystem=cmake dh_strip_nondeterminism -O--buildsystem=cmake dh_compress -O--buildsystem=cmake dh_fixperms -O--buildsystem=cmake dh_missing -O--buildsystem=cmake dh_dwz -O--buildsystem=cmake dh_strip -O--buildsystem=cmake dh_makeshlibs -O--buildsystem=cmake dh_shlibdeps -O--buildsystem=cmake dh_installdeb -O--buildsystem=cmake dh_gencontrol -O--buildsystem=cmake dh_md5sums -O--buildsystem=cmake dh_builddeb -O--buildsystem=cmake dpkg-deb: building package 'packmol' in '../packmol_20.010-1_arm64.deb'. dpkg-deb: building package 'packmol-dbgsym' in '../packmol-dbgsym_20.010-1_arm64.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../packmol_20.010-1_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/19362 and its subdirectories I: Current time: Fri Jul 9 12:46:18 -12 2021 I: pbuilder-time-stamp: 1625877978 Sat Jul 10 00:46:20 UTC 2021 I: 1st build successful. Starting 2nd build on remote node codethink9-arm64.debian.net. Sat Jul 10 00:46:20 UTC 2021 I: Preparing to do remote build '2' on codethink9-arm64.debian.net. Sat Jul 10 00:47:08 UTC 2021 I: Deleting $TMPDIR on codethink9-arm64.debian.net. Sat Jul 10 00:47:08 UTC 2021 I: packmol_20.010-1_arm64.changes: Format: 1.8 Date: Mon, 20 Jan 2020 10:49:33 +0800 Source: packmol Binary: packmol packmol-dbgsym Architecture: arm64 Version: 20.010-1 Distribution: unstable Urgency: medium Maintainer: Debichem Team Changed-By: Drew Parsons Description: packmol - Initial configurations for Molecular Dynamics Simulations Changes: packmol (20.010-1) unstable; urgency=medium . * New upstream release. Checksums-Sha1: e9b67fdae2bc665082eedb01bd3f8cfe6ee03b40 121680 packmol-dbgsym_20.010-1_arm64.deb a1514c3b78ed3e74ef9263da76edbc4c9665ec0e 5703 packmol_20.010-1_arm64.buildinfo 01c17802d7cb9cf5772cf3d0589a3815a13168cd 95812 packmol_20.010-1_arm64.deb Checksums-Sha256: 6e3cf7509e522648a371b811ced13e15a77ab65ed9bad2b5e790272f154512ff 121680 packmol-dbgsym_20.010-1_arm64.deb 14a26225e834b0acb1e8db406ba0908b6327b59b59d6a4285944f42c6b42b7f5 5703 packmol_20.010-1_arm64.buildinfo b78c0ac0c9b5790d68c0f543f7475ace023cd76da49ee52d798c55fa044034c7 95812 packmol_20.010-1_arm64.deb Files: b3472097949e4e1cebc0ffee2612bba9 121680 debug optional packmol-dbgsym_20.010-1_arm64.deb af859729be081fed87616f1db13ce3ab 5703 science optional packmol_20.010-1_arm64.buildinfo c64d3953969acab569988167a3cd9eb7 95812 science optional packmol_20.010-1_arm64.deb Sat Jul 10 00:47:09 UTC 2021 I: diffoscope 177 will be used to compare the two builds: # Profiling output for: /usr/bin/diffoscope --html /srv/reproducible-results/rbuild-debian/tmp.fHFrOzHAvT/packmol_20.010-1.diffoscope.html --text /srv/reproducible-results/rbuild-debian/tmp.fHFrOzHAvT/packmol_20.010-1.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/tmp.fHFrOzHAvT/packmol_20.010-1.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/tmp.fHFrOzHAvT/b1/packmol_20.010-1_arm64.changes /srv/reproducible-results/rbuild-debian/tmp.fHFrOzHAvT/b2/packmol_20.010-1_arm64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.288s) 0.288s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.018s) 0.018s 10 calls diffoscope.comparators.binary.FilesystemFile 0.000s 8 calls abc.DotChangesFile Sat Jul 10 00:47:12 UTC 2021 I: diffoscope 177 found no differences in the changes files, and a .buildinfo file also exists. Sat Jul 10 00:47:12 UTC 2021 I: packmol from bullseye built successfully and reproducibly on arm64. Sat Jul 10 00:47:13 UTC 2021 I: Submitting .buildinfo files to external archives: Sat Jul 10 00:47:13 UTC 2021 I: Submitting 8.0K b1/packmol_20.010-1_arm64.buildinfo.asc Sat Jul 10 00:47:14 UTC 2021 I: Submitting 8.0K b2/packmol_20.010-1_arm64.buildinfo.asc Sat Jul 10 00:47:16 UTC 2021 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Sat Jul 10 00:47:16 UTC 2021 I: Done submitting .buildinfo files. Sat Jul 10 00:47:16 UTC 2021 I: Removing signed packmol_20.010-1_arm64.buildinfo.asc files: removed './b1/packmol_20.010-1_arm64.buildinfo.asc' removed './b2/packmol_20.010-1_arm64.buildinfo.asc'