Tue Aug 10 11:12:05 UTC 2021 I: starting to build bcalm/bullseye/arm64 on jenkins on '2021-08-10 11:11' Tue Aug 10 11:12:05 UTC 2021 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/arm64_4/33116/console.log Tue Aug 10 11:12:05 UTC 2021 I: Downloading source for bullseye/bcalm=2.2.3-1 --2021-08-10 11:12:05-- http://cdn-fastly.deb.debian.org/debian/pool/main/b/bcalm/bcalm_2.2.3-1.dsc Connecting to 78.137.99.97:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2018 (2.0K) Saving to: ‘bcalm_2.2.3-1.dsc’ 0K . 100% 122M=0s 2021-08-10 11:12:05 (122 MB/s) - ‘bcalm_2.2.3-1.dsc’ saved [2018/2018] Tue Aug 10 11:12:05 UTC 2021 I: bcalm_2.2.3-1.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: bcalm Binary: bcalm Architecture: any Version: 2.2.3-1 Maintainer: Debian Med Packaging Team Uploaders: Shayan Doust Homepage: https://github.com/GATB/bcalm Standards-Version: 4.5.0 Vcs-Browser: https://salsa.debian.org/med-team/bcalm Vcs-Git: https://salsa.debian.org/med-team/bcalm.git Testsuite: autopkgtest Testsuite-Triggers: python3 Build-Depends: debhelper-compat (= 13), libgatbcore-dev, libboost-dev, libhdf5-dev, zlib1g-dev, cmake Package-List: bcalm deb science optional arch=any Checksums-Sha1: ac538e2a321119048bc396c02b40fa2efe1294bc 131547 bcalm_2.2.3.orig.tar.gz 07206b0c716242d9b90dbf139f90f7e9f154e4a8 19756 bcalm_2.2.3-1.debian.tar.xz Checksums-Sha256: c1b8368622e4fcb6db723d1c1f9a5f4fa7e8a6053d4db7f98a2858dacdcdf4d2 131547 bcalm_2.2.3.orig.tar.gz c5999b26dc00b92b0d2060807da471686e72c67066215b3773a3679442b5f738 19756 bcalm_2.2.3-1.debian.tar.xz Files: 4f373b85a526601b437cdc26d1649c63 131547 bcalm_2.2.3.orig.tar.gz 7e35f69cdc9beebcf02c354034d64df1 19756 bcalm_2.2.3-1.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAl9BCKMRHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtEZdA/9Htccv35o0KwDAB9lUb+LlwnnBo8xyXTK Y2KWDF9fK3klFaVF996ImuS7np8jSS9Iks8S6TBmXOr5w815J8/Lg8ilEnlzRK7c 2uSaxubDo8bfVUWOO7Tr/RRluefWdWaFnZv3MUk+mekWztP5UH1s/0kmx5r4EKSp CCd2zI2YrKPprzN903CFiaUnTA78/Knd4YEl0jj5BsKdOh5D4vIOqhQD8svn63Y1 fz10Pn9HwoBJb7xX2v43/HXsVw/CUiKRM1Gua8rDljShy4Mjm3tEcgbKXvueVbcr Jxe3hRK2B24K2ZYF5zrAfSM4bjcH59N0gqxa80mOpjXTLttkrFDv/MzpF0Kyla7+ JtVBf1WiiNVz1AmyCo0voF8m67VDww/+OK5+QUpXmfm3rKP0R+64OZkUpvAx/3PM afZDsBXDRfDpuaaAjCyLl507zPvQXRhMRvY7wYpe1DBR/MqGbMG96dagIzVK5Gj1 k/RDoTNQIcoPUK8wsVEz97HNoEwVP35mfgfxFulNvVBEIr8sV+oxePdGCmR7ycz2 8I7rTC7En+BCmaVAiJNRGI26tX0pdi/rkVrsLhzfn0cEQ3Jetx9WV3f9ixmgoDu0 fhIcYRgEhX4PY10KcvjsdP6ZMW+CXv+RPnUhMOHzXe/UQ25MxhIH442GOTI5lSp9 qaG29dccrVk= =joUw -----END PGP SIGNATURE----- Tue Aug 10 11:12:05 UTC 2021 I: Checking whether the package is not for us Tue Aug 10 11:12:06 UTC 2021 I: Starting 1st build on remote node codethink9-arm64.debian.net. Tue Aug 10 11:12:06 UTC 2021 I: Preparing to do remote build '1' on codethink9-arm64.debian.net. Tue Aug 10 11:13:24 UTC 2021 I: Deleting $TMPDIR on codethink9-arm64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Mon Sep 12 05:35:08 -12 2022 I: pbuilder-time-stamp: 1663004108 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bullseye-reproducible-base.tgz] I: copying local configuration I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [bcalm_2.2.3-1.dsc] I: copying [./bcalm_2.2.3.orig.tar.gz] I: copying [./bcalm_2.2.3-1.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/tmp/dpkg-verify-sig.SWhnJT9S/trustedkeys.kbx': General error gpgv: Signature made Fri Aug 21 23:59:31 2020 -12 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./bcalm_2.2.3-1.dsc dpkg-source: info: extracting bcalm in bcalm-2.2.3 dpkg-source: info: unpacking bcalm_2.2.3.orig.tar.gz dpkg-source: info: unpacking bcalm_2.2.3-1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying fix_tests.patch dpkg-source: info: applying modify_cmake.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/6722/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='arm64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=8' DISTRIBUTION='' HOME='/var/lib/jenkins' HOST_ARCH='arm64' IFS=' ' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='6722' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.o1A8cwpS1t/pbuilderrc_IQLk --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.o1A8cwpS1t/b1 --logfile b1/build.log bcalm_2.2.3-1.dsc' SUDO_GID='117' SUDO_UID='110' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' USERNAME='root' _='/usr/bin/systemd-run' http_proxy='http://192.168.101.16:3128' I: uname -a Linux codethink9-arm64 4.15.0-153-generic #160-Ubuntu SMP Thu Jul 29 07:06:07 UTC 2021 aarch64 GNU/Linux I: ls -l /bin total 5252 -rwxr-xr-x 1 root root 1282512 Aug 4 2021 bash -rwxr-xr-x 3 root root 34808 Jul 20 2020 bunzip2 -rwxr-xr-x 3 root root 34808 Jul 20 2020 bzcat lrwxrwxrwx 1 root root 6 Jul 20 2020 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2225 Jul 20 2020 bzdiff lrwxrwxrwx 1 root root 6 Jul 20 2020 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4877 Sep 4 2019 bzexe lrwxrwxrwx 1 root root 6 Jul 20 2020 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3775 Jul 20 2020 bzgrep -rwxr-xr-x 3 root root 34808 Jul 20 2020 bzip2 -rwxr-xr-x 1 root root 14264 Jul 20 2020 bzip2recover lrwxrwxrwx 1 root root 6 Jul 20 2020 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Jul 20 2020 bzmore -rwxr-xr-x 1 root root 39832 Sep 22 2020 cat -rwxr-xr-x 1 root root 64512 Sep 22 2020 chgrp -rwxr-xr-x 1 root root 60368 Sep 22 2020 chmod -rwxr-xr-x 1 root root 64528 Sep 22 2020 chown -rwxr-xr-x 1 root root 138896 Sep 22 2020 cp -rwxr-xr-x 1 root root 129544 Dec 10 2020 dash -rwxr-xr-x 1 root root 101384 Sep 22 2020 date -rwxr-xr-x 1 root root 80984 Sep 22 2020 dd -rwxr-xr-x 1 root root 89824 Sep 22 2020 df -rwxr-xr-x 1 root root 143088 Sep 22 2020 dir -rwxr-xr-x 1 root root 76152 Jul 28 2021 dmesg lrwxrwxrwx 1 root root 8 Nov 6 2019 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Nov 6 2019 domainname -> hostname -rwxr-xr-x 1 root root 35632 Sep 22 2020 echo -rwxr-xr-x 1 root root 28 Nov 9 2020 egrep -rwxr-xr-x 1 root root 31512 Sep 22 2020 false -rwxr-xr-x 1 root root 28 Nov 9 2020 fgrep -rwxr-xr-x 1 root root 64856 Jul 28 2021 findmnt -rwsr-xr-x 1 root root 34824 Feb 26 2021 fusermount -rwxr-xr-x 1 root root 178400 Nov 9 2020 grep -rwxr-xr-x 2 root root 2346 Mar 2 2021 gunzip -rwxr-xr-x 1 root root 6376 Mar 2 2021 gzexe -rwxr-xr-x 1 root root 93744 Mar 2 2021 gzip -rwxr-xr-x 1 root root 18440 Nov 6 2019 hostname -rwxr-xr-x 1 root root 68720 Sep 22 2020 ln -rwxr-xr-x 1 root root 52720 Feb 7 2020 login -rwxr-xr-x 1 root root 143088 Sep 22 2020 ls -rwxr-xr-x 1 root root 161960 Jul 28 2021 lsblk -rwxr-xr-x 1 root root 85200 Sep 22 2020 mkdir -rwxr-xr-x 1 root root 68744 Sep 22 2020 mknod -rwxr-xr-x 1 root root 43976 Sep 22 2020 mktemp -rwxr-xr-x 1 root root 51368 Jul 28 2021 more -rwsr-xr-x 1 root root 51360 Jul 28 2021 mount -rwxr-xr-x 1 root root 14496 Jul 28 2021 mountpoint -rwxr-xr-x 1 root root 134808 Sep 22 2020 mv lrwxrwxrwx 1 root root 8 Nov 6 2019 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Apr 18 2021 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 35720 Sep 22 2020 pwd lrwxrwxrwx 1 root root 4 Aug 4 2021 rbash -> bash -rwxr-xr-x 1 root root 43872 Sep 22 2020 readlink -rwxr-xr-x 1 root root 68592 Sep 22 2020 rm -rwxr-xr-x 1 root root 43880 Sep 22 2020 rmdir -rwxr-xr-x 1 root root 19208 Sep 27 2020 run-parts -rwxr-xr-x 1 root root 114016 Dec 22 2018 sed lrwxrwxrwx 1 root root 4 Sep 12 03:47 sh -> dash -rwxr-xr-x 1 root root 35656 Sep 22 2020 sleep -rwxr-xr-x 1 root root 72640 Sep 22 2020 stty -rwsr-xr-x 1 root root 67776 Jul 28 2021 su -rwxr-xr-x 1 root root 35672 Sep 22 2020 sync -rwxr-xr-x 1 root root 535768 Feb 16 2021 tar -rwxr-xr-x 1 root root 10568 Sep 27 2020 tempfile -rwxr-xr-x 1 root root 89120 Sep 22 2020 touch -rwxr-xr-x 1 root root 31512 Sep 22 2020 true -rwxr-xr-x 1 root root 14264 Feb 26 2021 ulockmgr_server -rwsr-xr-x 1 root root 30880 Jul 28 2021 umount -rwxr-xr-x 1 root root 35640 Sep 22 2020 uname -rwxr-xr-x 2 root root 2346 Mar 2 2021 uncompress -rwxr-xr-x 1 root root 143088 Sep 22 2020 vdir -rwxr-xr-x 1 root root 59584 Jul 28 2021 wdctl lrwxrwxrwx 1 root root 8 Nov 6 2019 ypdomainname -> hostname -rwxr-xr-x 1 root root 1984 Mar 2 2021 zcat -rwxr-xr-x 1 root root 1678 Mar 2 2021 zcmp -rwxr-xr-x 1 root root 5880 Mar 2 2021 zdiff -rwxr-xr-x 1 root root 29 Mar 2 2021 zegrep -rwxr-xr-x 1 root root 29 Mar 2 2021 zfgrep -rwxr-xr-x 1 root root 2081 Mar 2 2021 zforce -rwxr-xr-x 1 root root 7585 Mar 2 2021 zgrep -rwxr-xr-x 1 root root 2206 Mar 2 2021 zless -rwxr-xr-x 1 root root 1842 Mar 2 2021 zmore -rwxr-xr-x 1 root root 4553 Mar 2 2021 znew I: user script /srv/workspace/pbuilder/6722/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: arm64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), libgatbcore-dev, libboost-dev, libhdf5-dev, zlib1g-dev, cmake dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19646 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on libgatbcore-dev; however: Package libgatbcore-dev is not installed. pbuilder-satisfydepends-dummy depends on libboost-dev; however: Package libboost-dev is not installed. pbuilder-satisfydepends-dummy depends on libhdf5-dev; however: Package libhdf5-dev is not installed. pbuilder-satisfydepends-dummy depends on zlib1g-dev; however: Package zlib1g-dev is not installed. pbuilder-satisfydepends-dummy depends on cmake; however: Package cmake is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} cmake{a} cmake-data{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} hdf5-helpers{a} intltool-debian{a} libaec-dev{a} libaec0{a} libarchive-zip-perl{a} libarchive13{a} libboost-dev{a} libboost1.74-dev{a} libbrotli1{a} libcurl4{a} libdebhelper-perl{a} libelf1{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libgatbcore-dev{a} libgatbcore3{a} libgfortran5{a} libhdf5-103-1{a} libhdf5-cpp-103-1{a} libhdf5-dev{a} libhdf5-fortran-102{a} libhdf5-hl-100{a} libhdf5-hl-cpp-100{a} libhdf5-hl-fortran-100{a} libicu67{a} libjpeg-dev{a} libjpeg62-turbo{a} libjpeg62-turbo-dev{a} libjsoncpp24{a} libldap-2.4-2{a} libmagic-mgc{a} libmagic1{a} libncurses6{a} libnghttp2-14{a} libpipeline1{a} libprocps8{a} libpsl5{a} librhash0{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libsigsegv2{a} libssh2-1{a} libsub-override-perl{a} libsz2{a} libtool{a} libuchardet0{a} libuv1{a} libxml2{a} m4{a} man-db{a} po-debconf{a} procps{a} sensible-utils{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl libarchive-cpio-perl libgpm2 libldap-common libltdl-dev libmail-sendmail-perl libsasl2-modules lynx psmisc publicsuffix wget 0 packages upgraded, 70 newly installed, 0 to remove and 0 not upgraded. Need to get 46.2 MB of archives. After unpacking 359 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian bullseye/main arm64 bsdextrautils arm64 2.36.1-8 [142 kB] Get: 2 http://deb.debian.org/debian bullseye/main arm64 libuchardet0 arm64 0.0.7-1 [67.9 kB] Get: 3 http://deb.debian.org/debian bullseye/main arm64 groff-base arm64 1.22.4-6 [883 kB] Get: 4 http://deb.debian.org/debian bullseye/main arm64 libpipeline1 arm64 1.5.3-1 [33.0 kB] Get: 5 http://deb.debian.org/debian bullseye/main arm64 man-db arm64 2.9.4-2 [1336 kB] Get: 6 http://deb.debian.org/debian bullseye/main arm64 libncurses6 arm64 6.2+20201114-2 [93.2 kB] Get: 7 http://deb.debian.org/debian bullseye/main arm64 libprocps8 arm64 2:3.3.17-5 [61.9 kB] Get: 8 http://deb.debian.org/debian bullseye/main arm64 procps arm64 2:3.3.17-5 [497 kB] Get: 9 http://deb.debian.org/debian bullseye/main arm64 sensible-utils all 0.0.14 [14.8 kB] Get: 10 http://deb.debian.org/debian bullseye/main arm64 libmagic-mgc arm64 1:5.39-3 [273 kB] Get: 11 http://deb.debian.org/debian bullseye/main arm64 libmagic1 arm64 1:5.39-3 [121 kB] Get: 12 http://deb.debian.org/debian bullseye/main arm64 file arm64 1:5.39-3 [69.1 kB] Get: 13 http://deb.debian.org/debian bullseye/main arm64 gettext-base arm64 0.21-4 [173 kB] Get: 14 http://deb.debian.org/debian bullseye/main arm64 libsigsegv2 arm64 2.13-1 [34.7 kB] Get: 15 http://deb.debian.org/debian bullseye/main arm64 m4 arm64 1.4.18-5 [199 kB] Get: 16 http://deb.debian.org/debian bullseye/main arm64 autoconf all 2.69-14 [313 kB] Get: 17 http://deb.debian.org/debian bullseye/main arm64 autotools-dev all 20180224.1+nmu1 [77.1 kB] Get: 18 http://deb.debian.org/debian bullseye/main arm64 automake all 1:1.16.3-2 [814 kB] Get: 19 http://deb.debian.org/debian bullseye/main arm64 autopoint all 0.21-4 [510 kB] Get: 20 http://deb.debian.org/debian bullseye/main arm64 cmake-data all 3.18.4-2 [1725 kB] Get: 21 http://deb.debian.org/debian bullseye/main arm64 libicu67 arm64 67.1-7 [8467 kB] Get: 22 http://deb.debian.org/debian bullseye/main arm64 libxml2 arm64 2.9.10+dfsg-6.7 [629 kB] Get: 23 http://deb.debian.org/debian bullseye/main arm64 libarchive13 arm64 3.4.3-2+b1 [320 kB] Get: 24 http://deb.debian.org/debian bullseye/main arm64 libbrotli1 arm64 1.0.9-2+b2 [267 kB] Get: 25 http://deb.debian.org/debian bullseye/main arm64 libsasl2-modules-db arm64 2.1.27+dfsg-2.1 [69.3 kB] Get: 26 http://deb.debian.org/debian bullseye/main arm64 libsasl2-2 arm64 2.1.27+dfsg-2.1 [105 kB] Get: 27 http://deb.debian.org/debian bullseye/main arm64 libldap-2.4-2 arm64 2.4.57+dfsg-3 [222 kB] Get: 28 http://deb.debian.org/debian bullseye/main arm64 libnghttp2-14 arm64 1.43.0-1 [73.8 kB] Get: 29 http://deb.debian.org/debian bullseye/main arm64 libpsl5 arm64 0.21.0-1.2 [57.1 kB] Get: 30 http://deb.debian.org/debian bullseye/main arm64 librtmp1 arm64 2.4+20151223.gitfa8646d.1-2+b2 [59.4 kB] Get: 31 http://deb.debian.org/debian bullseye/main arm64 libssh2-1 arm64 1.9.0-2 [150 kB] Get: 32 http://deb.debian.org/debian bullseye/main arm64 libcurl4 arm64 7.74.0-1.3+b1 [321 kB] Get: 33 http://deb.debian.org/debian bullseye/main arm64 libexpat1 arm64 2.2.10-2 [83.1 kB] Get: 34 http://deb.debian.org/debian bullseye/main arm64 libjsoncpp24 arm64 1.9.4-4 [72.5 kB] Get: 35 http://deb.debian.org/debian bullseye/main arm64 librhash0 arm64 1.4.1-2 [127 kB] Get: 36 http://deb.debian.org/debian bullseye/main arm64 libuv1 arm64 1.40.0-2 [126 kB] Get: 37 http://deb.debian.org/debian bullseye/main arm64 cmake arm64 3.18.4-2 [3673 kB] Get: 38 http://deb.debian.org/debian bullseye/main arm64 libdebhelper-perl all 13.3.4 [189 kB] Get: 39 http://deb.debian.org/debian bullseye/main arm64 libtool all 2.4.6-15 [513 kB] Get: 40 http://deb.debian.org/debian bullseye/main arm64 dh-autoreconf all 20 [17.1 kB] Get: 41 http://deb.debian.org/debian bullseye/main arm64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 42 http://deb.debian.org/debian bullseye/main arm64 libsub-override-perl all 0.09-2 [10.2 kB] Get: 43 http://deb.debian.org/debian bullseye/main arm64 libfile-stripnondeterminism-perl all 1.12.0-1 [26.3 kB] Get: 44 http://deb.debian.org/debian bullseye/main arm64 dh-strip-nondeterminism all 1.12.0-1 [15.4 kB] Get: 45 http://deb.debian.org/debian bullseye/main arm64 libelf1 arm64 0.183-1 [164 kB] Get: 46 http://deb.debian.org/debian bullseye/main arm64 dwz arm64 0.13+20210201-1 [155 kB] Get: 47 http://deb.debian.org/debian bullseye/main arm64 gettext arm64 0.21-4 [1261 kB] Get: 48 http://deb.debian.org/debian bullseye/main arm64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get: 49 http://deb.debian.org/debian bullseye/main arm64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 50 http://deb.debian.org/debian bullseye/main arm64 debhelper all 13.3.4 [1049 kB] Get: 51 http://deb.debian.org/debian bullseye/main arm64 hdf5-helpers arm64 1.10.6+repack-4 [40.4 kB] Get: 52 http://deb.debian.org/debian bullseye/main arm64 libaec0 arm64 1.0.4-1 [19.8 kB] Get: 53 http://deb.debian.org/debian bullseye/main arm64 libsz2 arm64 1.0.4-1 [6736 B] Get: 54 http://deb.debian.org/debian bullseye/main arm64 libaec-dev arm64 1.0.4-1 [18.2 kB] Get: 55 http://deb.debian.org/debian bullseye/main arm64 libboost1.74-dev arm64 1.74.0-9 [9534 kB] Get: 56 http://deb.debian.org/debian bullseye/main arm64 libboost-dev arm64 1.74.0.3 [4548 B] Get: 57 http://deb.debian.org/debian bullseye/main arm64 libgatbcore3 arm64 1.4.2+dfsg-6 [1561 kB] Get: 58 http://deb.debian.org/debian bullseye/main arm64 libgatbcore-dev arm64 1.4.2+dfsg-6 [4039 kB] Get: 59 http://deb.debian.org/debian bullseye/main arm64 libgfortran5 arm64 10.2.1-6 [333 kB] Get: 60 http://deb.debian.org/debian bullseye/main arm64 libhdf5-103-1 arm64 1.10.6+repack-4 [1032 kB] Get: 61 http://deb.debian.org/debian bullseye/main arm64 libhdf5-cpp-103-1 arm64 1.10.6+repack-4 [131 kB] Get: 62 http://deb.debian.org/debian bullseye/main arm64 libhdf5-fortran-102 arm64 1.10.6+repack-4 [103 kB] Get: 63 http://deb.debian.org/debian bullseye/main arm64 libhdf5-hl-100 arm64 1.10.6+repack-4 [78.6 kB] Get: 64 http://deb.debian.org/debian bullseye/main arm64 libhdf5-hl-fortran-100 arm64 1.10.6+repack-4 [55.0 kB] Get: 65 http://deb.debian.org/debian bullseye/main arm64 libhdf5-hl-cpp-100 arm64 1.10.6+repack-4 [37.6 kB] Get: 66 http://deb.debian.org/debian bullseye/main arm64 zlib1g-dev arm64 1:1.2.11.dfsg-2 [189 kB] Get: 67 http://deb.debian.org/debian bullseye/main arm64 libjpeg62-turbo arm64 1:2.0.6-4 [133 kB] Get: 68 http://deb.debian.org/debian bullseye/main arm64 libjpeg62-turbo-dev arm64 1:2.0.6-4 [255 kB] Get: 69 http://deb.debian.org/debian bullseye/main arm64 libjpeg-dev arm64 1:2.0.6-4 [67.8 kB] Get: 70 http://deb.debian.org/debian bullseye/main arm64 libhdf5-dev arm64 1.10.6+repack-4 [2535 kB] Fetched 46.2 MB in 2s (27.3 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package bsdextrautils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19646 files and directories currently installed.) Preparing to unpack .../00-bsdextrautils_2.36.1-8_arm64.deb ... Unpacking bsdextrautils (2.36.1-8) ... Selecting previously unselected package libuchardet0:arm64. Preparing to unpack .../01-libuchardet0_0.0.7-1_arm64.deb ... Unpacking libuchardet0:arm64 (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../02-groff-base_1.22.4-6_arm64.deb ... 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Selecting previously unselected package libmagic-mgc. Preparing to unpack .../09-libmagic-mgc_1%3a5.39-3_arm64.deb ... Unpacking libmagic-mgc (1:5.39-3) ... Selecting previously unselected package libmagic1:arm64. Preparing to unpack .../10-libmagic1_1%3a5.39-3_arm64.deb ... Unpacking libmagic1:arm64 (1:5.39-3) ... Selecting previously unselected package file. Preparing to unpack .../11-file_1%3a5.39-3_arm64.deb ... Unpacking file (1:5.39-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../12-gettext-base_0.21-4_arm64.deb ... Unpacking gettext-base (0.21-4) ... Selecting previously unselected package libsigsegv2:arm64. Preparing to unpack .../13-libsigsegv2_2.13-1_arm64.deb ... Unpacking libsigsegv2:arm64 (2.13-1) ... Selecting previously unselected package m4. Preparing to unpack .../14-m4_1.4.18-5_arm64.deb ... Unpacking m4 (1.4.18-5) ... Selecting previously unselected package autoconf. Preparing to unpack .../15-autoconf_2.69-14_all.deb ... 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Selecting previously unselected package libarchive13:arm64. Preparing to unpack .../22-libarchive13_3.4.3-2+b1_arm64.deb ... Unpacking libarchive13:arm64 (3.4.3-2+b1) ... Selecting previously unselected package libbrotli1:arm64. Preparing to unpack .../23-libbrotli1_1.0.9-2+b2_arm64.deb ... Unpacking libbrotli1:arm64 (1.0.9-2+b2) ... Selecting previously unselected package libsasl2-modules-db:arm64. Preparing to unpack .../24-libsasl2-modules-db_2.1.27+dfsg-2.1_arm64.deb ... Unpacking libsasl2-modules-db:arm64 (2.1.27+dfsg-2.1) ... Selecting previously unselected package libsasl2-2:arm64. Preparing to unpack .../25-libsasl2-2_2.1.27+dfsg-2.1_arm64.deb ... Unpacking libsasl2-2:arm64 (2.1.27+dfsg-2.1) ... Selecting previously unselected package libldap-2.4-2:arm64. Preparing to unpack .../26-libldap-2.4-2_2.4.57+dfsg-3_arm64.deb ... Unpacking libldap-2.4-2:arm64 (2.4.57+dfsg-3) ... Selecting previously unselected package libnghttp2-14:arm64. Preparing to unpack .../27-libnghttp2-14_1.43.0-1_arm64.deb ... Unpacking libnghttp2-14:arm64 (1.43.0-1) ... Selecting previously unselected package libpsl5:arm64. Preparing to unpack .../28-libpsl5_0.21.0-1.2_arm64.deb ... Unpacking libpsl5:arm64 (0.21.0-1.2) ... Selecting previously unselected package librtmp1:arm64. Preparing to unpack .../29-librtmp1_2.4+20151223.gitfa8646d.1-2+b2_arm64.deb ... Unpacking librtmp1:arm64 (2.4+20151223.gitfa8646d.1-2+b2) ... Selecting previously unselected package libssh2-1:arm64. Preparing to unpack .../30-libssh2-1_1.9.0-2_arm64.deb ... Unpacking libssh2-1:arm64 (1.9.0-2) ... Selecting previously unselected package libcurl4:arm64. Preparing to unpack .../31-libcurl4_7.74.0-1.3+b1_arm64.deb ... Unpacking libcurl4:arm64 (7.74.0-1.3+b1) ... Selecting previously unselected package libexpat1:arm64. Preparing to unpack .../32-libexpat1_2.2.10-2_arm64.deb ... Unpacking libexpat1:arm64 (2.2.10-2) ... 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Selecting previously unselected package dwz. Preparing to unpack .../45-dwz_0.13+20210201-1_arm64.deb ... Unpacking dwz (0.13+20210201-1) ... Selecting previously unselected package gettext. Preparing to unpack .../46-gettext_0.21-4_arm64.deb ... Unpacking gettext (0.21-4) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../47-intltool-debian_0.35.0+20060710.5_all.deb ... Unpacking intltool-debian (0.35.0+20060710.5) ... Selecting previously unselected package po-debconf. Preparing to unpack .../48-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../49-debhelper_13.3.4_all.deb ... Unpacking debhelper (13.3.4) ... Selecting previously unselected package hdf5-helpers. Preparing to unpack .../50-hdf5-helpers_1.10.6+repack-4_arm64.deb ... Unpacking hdf5-helpers (1.10.6+repack-4) ... Selecting previously unselected package libaec0:arm64. 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Preparing to unpack .../67-libjpeg62-turbo-dev_1%3a2.0.6-4_arm64.deb ... Unpacking libjpeg62-turbo-dev:arm64 (1:2.0.6-4) ... Selecting previously unselected package libjpeg-dev:arm64. Preparing to unpack .../68-libjpeg-dev_1%3a2.0.6-4_arm64.deb ... Unpacking libjpeg-dev:arm64 (1:2.0.6-4) ... Selecting previously unselected package libhdf5-dev. Preparing to unpack .../69-libhdf5-dev_1.10.6+repack-4_arm64.deb ... Unpacking libhdf5-dev (1.10.6+repack-4) ... Setting up libexpat1:arm64 (2.2.10-2) ... Setting up libpipeline1:arm64 (1.5.3-1) ... Setting up libpsl5:arm64 (0.21.0-1.2) ... Setting up libboost1.74-dev:arm64 (1.74.0-9) ... Setting up bsdextrautils (2.36.1-8) ... update-alternatives: using /usr/bin/write.ul to provide /usr/bin/write (write) in auto mode Setting up hdf5-helpers (1.10.6+repack-4) ... Setting up libicu67:arm64 (67.1-7) ... Setting up libmagic-mgc (1:5.39-3) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.3.4) ... Setting up libbrotli1:arm64 (1.0.9-2+b2) ... Setting up libnghttp2-14:arm64 (1.43.0-1) ... Setting up libmagic1:arm64 (1:5.39-3) ... Setting up gettext-base (0.21-4) ... Setting up file (1:5.39-3) ... Setting up libaec0:arm64 (1.0.4-1) ... Setting up libsasl2-modules-db:arm64 (2.1.27+dfsg-2.1) ... Setting up autotools-dev (20180224.1+nmu1) ... Setting up libuv1:arm64 (1.40.0-2) ... Setting up libjpeg62-turbo:arm64 (1:2.0.6-4) ... Setting up libjpeg62-turbo-dev:arm64 (1:2.0.6-4) ... Setting up librtmp1:arm64 (2.4+20151223.gitfa8646d.1-2+b2) ... Setting up libncurses6:arm64 (6.2+20201114-2) ... Setting up libsigsegv2:arm64 (2.13-1) ... Setting up autopoint (0.21-4) ... Setting up libsasl2-2:arm64 (2.1.27+dfsg-2.1) ... Setting up libgfortran5:arm64 (10.2.1-6) ... Setting up libgatbcore3:arm64 (1.4.2+dfsg-6) ... Setting up libjsoncpp24:arm64 (1.9.4-4) ... Setting up zlib1g-dev:arm64 (1:1.2.11.dfsg-2) ... Setting up sensible-utils (0.0.14) ... Setting up librhash0:arm64 (1.4.1-2) ... Setting up libuchardet0:arm64 (0.0.7-1) ... Setting up libsub-override-perl (0.09-2) ... Setting up libssh2-1:arm64 (1.9.0-2) ... Setting up cmake-data (3.18.4-2) ... Setting up libboost-dev:arm64 (1.74.0.3) ... Setting up libelf1:arm64 (0.183-1) ... Setting up libxml2:arm64 (2.9.10+dfsg-6.7) ... Setting up libprocps8:arm64 (2:3.3.17-5) ... Setting up libsz2:arm64 (1.0.4-1) ... Setting up libfile-stripnondeterminism-perl (1.12.0-1) ... Setting up gettext (0.21-4) ... Setting up libtool (2.4.6-15) ... Setting up libarchive13:arm64 (3.4.3-2+b1) ... Setting up libaec-dev:arm64 (1.0.4-1) ... Setting up libjpeg-dev:arm64 (1:2.0.6-4) ... Setting up libldap-2.4-2:arm64 (2.4.57+dfsg-3) ... Setting up m4 (1.4.18-5) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up libgatbcore-dev:arm64 (1.4.2+dfsg-6) ... Setting up autoconf (2.69-14) ... Setting up dh-strip-nondeterminism (1.12.0-1) ... Setting up libhdf5-103-1:arm64 (1.10.6+repack-4) ... Setting up dwz (0.13+20210201-1) ... Setting up groff-base (1.22.4-6) ... Setting up procps (2:3.3.17-5) ... Setting up libhdf5-cpp-103-1:arm64 (1.10.6+repack-4) ... Setting up libcurl4:arm64 (7.74.0-1.3+b1) ... Setting up libhdf5-hl-100:arm64 (1.10.6+repack-4) ... Setting up automake (1:1.16.3-2) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.9.4-2) ... Not building database; man-db/auto-update is not 'true'. Setting up dh-autoreconf (20) ... Setting up libhdf5-hl-cpp-100:arm64 (1.10.6+repack-4) ... Setting up libhdf5-fortran-102:arm64 (1.10.6+repack-4) ... Setting up cmake (3.18.4-2) ... Setting up libhdf5-hl-fortran-100:arm64 (1.10.6+repack-4) ... Setting up debhelper (13.3.4) ... Setting up libhdf5-dev (1.10.6+repack-4) ... update-alternatives: using /usr/lib/aarch64-linux-gnu/pkgconfig/hdf5-serial.pc to provide /usr/lib/aarch64-linux-gnu/pkgconfig/hdf5.pc (hdf5.pc) in auto mode Processing triggers for libc-bin (2.31-13) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/bcalm-2.2.3/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../bcalm_2.2.3-1_source.changes dpkg-buildpackage: info: source package bcalm dpkg-buildpackage: info: source version 2.2.3-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture arm64 debian/rules clean dh clean dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf dh_auto_configure cd obj-aarch64-linux-gnu && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/aarch64-linux-gnu .. -- The C compiler identification is GNU 10.2.1 -- The CXX compiler identification is GNU 10.2.1 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY -- Build files have been written to: /build/bcalm-2.2.3/obj-aarch64-linux-gnu dh_auto_build cd obj-aarch64-linux-gnu && make -j8 "INSTALL=install --strip-program=true" VERBOSE=1 make[1]: Entering directory '/build/bcalm-2.2.3/obj-aarch64-linux-gnu' /usr/bin/cmake -S/build/bcalm-2.2.3 -B/build/bcalm-2.2.3/obj-aarch64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/bcalm-2.2.3/obj-aarch64-linux-gnu/CMakeFiles /build/bcalm-2.2.3/obj-aarch64-linux-gnu//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/build/bcalm-2.2.3/obj-aarch64-linux-gnu' make -f CMakeFiles/bcalm.dir/build.make CMakeFiles/bcalm.dir/depend make[3]: Entering directory '/build/bcalm-2.2.3/obj-aarch64-linux-gnu' cd /build/bcalm-2.2.3/obj-aarch64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/bcalm-2.2.3 /build/bcalm-2.2.3 /build/bcalm-2.2.3/obj-aarch64-linux-gnu /build/bcalm-2.2.3/obj-aarch64-linux-gnu /build/bcalm-2.2.3/obj-aarch64-linux-gnu/CMakeFiles/bcalm.dir/DependInfo.cmake --color= Dependee "/build/bcalm-2.2.3/obj-aarch64-linux-gnu/CMakeFiles/bcalm.dir/DependInfo.cmake" is newer than depender "/build/bcalm-2.2.3/obj-aarch64-linux-gnu/CMakeFiles/bcalm.dir/depend.internal". Dependee "/build/bcalm-2.2.3/obj-aarch64-linux-gnu/CMakeFiles/CMakeDirectoryInformation.cmake" is newer than depender "/build/bcalm-2.2.3/obj-aarch64-linux-gnu/CMakeFiles/bcalm.dir/depend.internal". Scanning dependencies of target bcalm make[3]: Leaving directory '/build/bcalm-2.2.3/obj-aarch64-linux-gnu' make -f CMakeFiles/bcalm.dir/build.make CMakeFiles/bcalm.dir/build make[3]: Entering directory '/build/bcalm-2.2.3/obj-aarch64-linux-gnu' [ 33%] Building CXX object CMakeFiles/bcalm.dir/src/bcalm_1.cpp.o /usr/bin/c++ -DVERSION=\"v2.2.3\" -I/build/bcalm-2.2.3/src -g -O2 -fdebug-prefix-map=/build/bcalm-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bcalm.dir/src/bcalm_1.cpp.o -c /build/bcalm-2.2.3/src/bcalm_1.cpp [ 66%] Building CXX object CMakeFiles/bcalm.dir/src/main.cpp.o /usr/bin/c++ -DVERSION=\"v2.2.3\" -I/build/bcalm-2.2.3/src -g -O2 -fdebug-prefix-map=/build/bcalm-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -o CMakeFiles/bcalm.dir/src/main.cpp.o -c /build/bcalm-2.2.3/src/main.cpp [100%] Linking CXX executable bcalm /usr/bin/cmake -E cmake_link_script CMakeFiles/bcalm.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/build/bcalm-2.2.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/bcalm.dir/src/bcalm_1.cpp.o CMakeFiles/bcalm.dir/src/main.cpp.o -o bcalm -L/usr/lib/aarch64-linux-gnu/hdf5/serial -Wl,-rpath,/usr/lib/aarch64-linux-gnu/hdf5/serial: -lgatbcore -lhdf5 -lz make[3]: Leaving directory '/build/bcalm-2.2.3/obj-aarch64-linux-gnu' [100%] Built target bcalm make[2]: Leaving directory '/build/bcalm-2.2.3/obj-aarch64-linux-gnu' /usr/bin/cmake -E cmake_progress_start /build/bcalm-2.2.3/obj-aarch64-linux-gnu/CMakeFiles 0 make[1]: Leaving directory '/build/bcalm-2.2.3/obj-aarch64-linux-gnu' dh_auto_test create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install cd obj-aarch64-linux-gnu && make -j8 install DESTDIR=/build/bcalm-2.2.3/debian/bcalm AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/bcalm-2.2.3/obj-aarch64-linux-gnu' /usr/bin/cmake -S/build/bcalm-2.2.3 -B/build/bcalm-2.2.3/obj-aarch64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall make[2]: Entering directory '/build/bcalm-2.2.3/obj-aarch64-linux-gnu' make[2]: Nothing to be done for 'preinstall'. make[2]: Leaving directory '/build/bcalm-2.2.3/obj-aarch64-linux-gnu' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "None" -- Installing: /build/bcalm-2.2.3/debian/bcalm/usr/bin/bcalm -- Set runtime path of "/build/bcalm-2.2.3/debian/bcalm/usr/bin/bcalm" to "" -- Installing: /build/bcalm-2.2.3/debian/bcalm/usr/example -- Installing: /build/bcalm-2.2.3/debian/bcalm/usr/example/run-tiny.sh -- Installing: /build/bcalm-2.2.3/debian/bcalm/usr/example/uf -- Installing: /build/bcalm-2.2.3/debian/bcalm/usr/example/uf/testUF.cpp -- Installing: /build/bcalm-2.2.3/debian/bcalm/usr/example/uf/Makefile -- Installing: /build/bcalm-2.2.3/debian/bcalm/usr/example/tiny_read.fa -- Installing: /build/bcalm-2.2.3/debian/bcalm/usr/example/pufferize -- Installing: /build/bcalm-2.2.3/debian/bcalm/usr/example/pufferize/run.sh -- Installing: /build/bcalm-2.2.3/debian/bcalm/usr/example/pufferize/refs.fa -- Installing: /build/bcalm-2.2.3/debian/bcalm/usr/example/circular_unitigs_unittests -- Installing: /build/bcalm-2.2.3/debian/bcalm/usr/example/circular_unitigs_unittests/CMD -- Installing: /build/bcalm-2.2.3/debian/bcalm/usr/example/circular_unitigs_unittests/test3.fa -- Installing: /build/bcalm-2.2.3/debian/bcalm/usr/example/circular_unitigs_unittests/test2.fa -- Installing: /build/bcalm-2.2.3/debian/bcalm/usr/example/circular_unitigs_unittests/test1.fa -- Installing: /build/bcalm-2.2.3/debian/bcalm/usr/example/circular_unitigs_unittests/README -- Installing: /build/bcalm-2.2.3/debian/bcalm/usr/bin/../VERSION -- Installing: /build/bcalm-2.2.3/debian/bcalm/usr/bin/../LICENSE -- Installing: /build/bcalm-2.2.3/debian/bcalm/usr/bin/../README.md make[1]: Leaving directory '/build/bcalm-2.2.3/obj-aarch64-linux-gnu' debian/rules override_dh_install make[1]: Entering directory '/build/bcalm-2.2.3' dh_install rm -r debian/bcalm/usr/example \ debian/bcalm/usr/README.md \ debian/bcalm/usr/LICENSE \ debian/bcalm/usr/VERSION make[1]: Leaving directory '/build/bcalm-2.2.3' dh_installdocs dh_installchangelogs dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_dwz -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/bcalm/usr/bin/bcalm was not linked against libhdf5_serial.so.103 (it uses none of the library's symbols) dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'bcalm-dbgsym' in '../bcalm-dbgsym_2.2.3-1_arm64.deb'. dpkg-deb: building package 'bcalm' in '../bcalm_2.2.3-1_arm64.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../bcalm_2.2.3-1_arm64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/6722 and its subdirectories I: Current time: Mon Sep 12 05:36:23 -12 2022 I: pbuilder-time-stamp: 1663004183 Tue Aug 10 11:13:25 UTC 2021 I: 1st build successful. Starting 2nd build on remote node codethink16-arm64.debian.net. Tue Aug 10 11:13:25 UTC 2021 I: Preparing to do remote build '2' on codethink16-arm64.debian.net. Tue Aug 10 11:14:53 UTC 2021 I: Deleting $TMPDIR on codethink16-arm64.debian.net. Tue Aug 10 11:14:54 UTC 2021 I: bcalm_2.2.3-1_arm64.changes: Format: 1.8 Date: Sat, 22 Aug 2020 13:55:36 +0200 Source: bcalm Binary: bcalm bcalm-dbgsym Architecture: arm64 Version: 2.2.3-1 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: bcalm - de Bruijn compaction in low memory Changes: bcalm (2.2.3-1) unstable; urgency=medium . [ David Parsons ] * Team upload. * New upstream version . [ Andreas Tille ] * debhelper-compat 13 (routine-update) * Add salsa-ci file (routine-update) * Rules-Requires-Root: no (routine-update) Checksums-Sha1: 5b84c133a69316f5767bde2f8de4d70d5562a315 384684 bcalm-dbgsym_2.2.3-1_arm64.deb 77237cdba62f6b1d97946c6507319ea3127ef1b1 6222 bcalm_2.2.3-1_arm64.buildinfo 13538c53204858b5b1b8c9f5c82ff957a6d50db1 34812 bcalm_2.2.3-1_arm64.deb Checksums-Sha256: b123f5c25411c38835188d0dd02da4160ac5510b04d7983befb64da9471e46cf 384684 bcalm-dbgsym_2.2.3-1_arm64.deb 70cc3578b77f0188f304ee5994f5610e576e0d0b53132c6bc5315e147efcf69e 6222 bcalm_2.2.3-1_arm64.buildinfo e9ce230fc06d0fd404c030b57290d9c593418ff2820095b4a575dd3c40734ed4 34812 bcalm_2.2.3-1_arm64.deb Files: d9bac2c2819f98e7f8ee98f706c352d8 384684 debug optional bcalm-dbgsym_2.2.3-1_arm64.deb 716ad86cf8cef579a52d55d9ae4fc07d 6222 science optional bcalm_2.2.3-1_arm64.buildinfo 7e521d101cc2ae03e2d6c93189577621 34812 science optional bcalm_2.2.3-1_arm64.deb Tue Aug 10 11:14:55 UTC 2021 I: diffoscope 177 will be used to compare the two builds: # Profiling output for: /usr/bin/diffoscope --html /srv/reproducible-results/rbuild-debian/tmp.o1A8cwpS1t/bcalm_2.2.3-1.diffoscope.html --text /srv/reproducible-results/rbuild-debian/tmp.o1A8cwpS1t/bcalm_2.2.3-1.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/tmp.o1A8cwpS1t/bcalm_2.2.3-1.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/tmp.o1A8cwpS1t/b1/bcalm_2.2.3-1_arm64.changes /srv/reproducible-results/rbuild-debian/tmp.o1A8cwpS1t/b2/bcalm_2.2.3-1_arm64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.271s) 0.271s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.023s) 0.023s 10 calls diffoscope.comparators.binary.FilesystemFile 0.000s 8 calls abc.DotChangesFile Tue Aug 10 11:14:56 UTC 2021 I: diffoscope 177 found no differences in the changes files, and a .buildinfo file also exists. Tue Aug 10 11:14:56 UTC 2021 I: bcalm from bullseye built successfully and reproducibly on arm64. Tue Aug 10 11:14:57 UTC 2021 I: Submitting .buildinfo files to external archives: Tue Aug 10 11:14:57 UTC 2021 I: Submitting 8.0K b1/bcalm_2.2.3-1_arm64.buildinfo.asc Tue Aug 10 11:14:58 UTC 2021 I: Submitting 8.0K b2/bcalm_2.2.3-1_arm64.buildinfo.asc Tue Aug 10 11:14:59 UTC 2021 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Tue Aug 10 11:14:59 UTC 2021 I: Done submitting .buildinfo files. Tue Aug 10 11:14:59 UTC 2021 I: Removing signed bcalm_2.2.3-1_arm64.buildinfo.asc files: removed './b1/bcalm_2.2.3-1_arm64.buildinfo.asc' removed './b2/bcalm_2.2.3-1_arm64.buildinfo.asc'