Sun Nov 21 06:01:19 UTC 2021 I: starting to build sumaclust/bullseye/amd64 on jenkins on '2021-11-21 06:00' Sun Nov 21 06:01:19 UTC 2021 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/amd64_29/27597/console.log Sun Nov 21 06:01:19 UTC 2021 I: Downloading source for bullseye/sumaclust=1.0.36+ds-1 --2021-11-21 06:01:20-- http://cdn-fastly.deb.debian.org/debian/pool/main/s/sumaclust/sumaclust_1.0.36%2bds-1.dsc Connecting to 78.137.99.97:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2078 (2.0K) Saving to: ‘sumaclust_1.0.36+ds-1.dsc’ 0K .. 100% 121M=0s 2021-11-21 06:01:26 (121 MB/s) - ‘sumaclust_1.0.36+ds-1.dsc’ saved [2078/2078] Sun Nov 21 06:01:26 UTC 2021 I: sumaclust_1.0.36+ds-1.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: sumaclust Binary: sumaclust Architecture: any Version: 1.0.36+ds-1 Maintainer: Debian Med Packaging Team Uploaders: Tim Booth , Andreas Tille , Pierre Gruet Homepage: http://metabarcoding.org/sumaclust Standards-Version: 4.5.0 Vcs-Browser: https://salsa.debian.org/med-team/sumaclust Vcs-Git: https://salsa.debian.org/med-team/sumaclust.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 12), libsuma-dev Package-List: sumaclust deb science optional arch=any Checksums-Sha1: 73b85f10a7a36b7835df4aa5932d5b338e653d0e 109149 sumaclust_1.0.36+ds.orig.tar.gz 782464e0975cc75593f4cb1e51b60706e2b82afb 12272 sumaclust_1.0.36+ds-1.debian.tar.xz Checksums-Sha256: c4a8df2f35bb3aee60956de5f42b8ddc0ecd9cc6d0fc7aed9834d9ba48831706 109149 sumaclust_1.0.36+ds.orig.tar.gz 50c17416586cebaf447b5f3b91d4498eed32fab49d350f6141707eea6719c590 12272 sumaclust_1.0.36+ds-1.debian.tar.xz Files: cdb3c377e8e18981b1ec9cc25810db2f 109149 sumaclust_1.0.36+ds.orig.tar.gz b1c1c240014081116856d6b373aa1812 12272 sumaclust_1.0.36+ds-1.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAl6dfRoRHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtGiKw/+J/ch/Vfdmgz6wOcP0iMFFNAISfwER6Ea hdavJ3Lr5Y25pzuz8FutwaG+O2VYc+1A2t7EWzN+3ENQ0/AN3qE55jdS4lLHGk9A qnR5YQ0X1Y99He53jYiGiccsBcdQmYlzpi1cNw7TnuhcqiIPtl3MVbpzo5AtV9O+ rcu684BA3udaoHvny292CxCrsfgm9IoEPZhsTNdu6zgGL7aI0j00AtgISG8lrI1R Tab4RLJulP0Z/1jOzrNV3NhGFhdfNC98yNCYMcH7HZm4Q1woIyJMjdrMg15L5pO2 j+pxqEQZK2NCajnXMIpE6UQhEX253+oCEPVwK6nr9U0ojIKmzKW7JgNdXLejz6UW RsM7bvvCJszUwm35REKewYWsbOLeM385WiEkg+l2K/wmI2KLmrMAw2kLZ1iMD+nP iI7ulCOoEXz5XuUjGZIdXq6qHckBPqS1s1xPung+Kd3LCKBAzfarSzgrznR8tfVD Pe4XCVpBAQSeWOCMgJWZQv5c30Wd2BwKIEUvD2VZhW4kUavuXDzUm03/R/nVznuj HskFAbC/RqzQLhjYJw2ETtQDI2jdJzxEa3zWqc3ZkVHVLYcnzlN2Nx5vOUumI44s y5im/qa87bknCq8TukEXq8Nkz7CAEtlhSN2oAzgJ0knmA+zps92972/mm5CBT2QY dpj7HVjOpg8= =UpKk -----END PGP SIGNATURE----- Sun Nov 21 06:01:26 UTC 2021 I: Checking whether the package is not for us Sun Nov 21 06:01:26 UTC 2021 I: Starting 1st build on remote node ionos11-amd64.debian.net. Sun Nov 21 06:01:26 UTC 2021 I: Preparing to do remote build '1' on ionos11-amd64.debian.net. Sun Nov 21 06:05:10 UTC 2021 I: Deleting $TMPDIR on ionos11-amd64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Sat Nov 20 18:01:48 -12 2021 I: pbuilder-time-stamp: 1637474508 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bullseye-reproducible-base.tgz] I: copying local configuration I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [sumaclust_1.0.36+ds-1.dsc] I: copying [./sumaclust_1.0.36+ds.orig.tar.gz] I: copying [./sumaclust_1.0.36+ds-1.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/tmp/dpkg-verify-sig.rOdToiBE/trustedkeys.kbx': General error gpgv: Signature made Sun Apr 19 22:44:42 2020 -12 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./sumaclust_1.0.36+ds-1.dsc dpkg-source: info: extracting sumaclust in sumaclust-1.0.36+ds dpkg-source: info: unpacking sumaclust_1.0.36+ds.orig.tar.gz dpkg-source: info: unpacking sumaclust_1.0.36+ds-1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying hardening.patch dpkg-source: info: applying fix_build.patch dpkg-source: info: applying use_debian_packaged_sumalibs.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/1335426/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='amd64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=15' DISTRIBUTION='' HOME='/root' HOST_ARCH='amd64' IFS=' ' INVOCATION_ID='9ae049462d2947a5bdb4c1d1a9431596' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='1335426' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.rabs2ShjLy/pbuilderrc_RahO --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.rabs2ShjLy/b1 --logfile b1/build.log sumaclust_1.0.36+ds-1.dsc' SUDO_GID='111' SUDO_UID='106' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://78.137.99.97:3128' I: uname -a Linux ionos11-amd64 5.10.0-9-amd64 #1 SMP Debian 5.10.70-1 (2021-09-30) x86_64 GNU/Linux I: ls -l /bin total 5476 -rwxr-xr-x 1 root root 1234376 Aug 4 08:25 bash -rwxr-xr-x 3 root root 38984 Jul 20 2020 bunzip2 -rwxr-xr-x 3 root root 38984 Jul 20 2020 bzcat lrwxrwxrwx 1 root root 6 Jul 20 2020 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2225 Jul 20 2020 bzdiff lrwxrwxrwx 1 root root 6 Jul 20 2020 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4877 Sep 4 2019 bzexe lrwxrwxrwx 1 root root 6 Jul 20 2020 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3775 Jul 20 2020 bzgrep -rwxr-xr-x 3 root root 38984 Jul 20 2020 bzip2 -rwxr-xr-x 1 root root 18424 Jul 20 2020 bzip2recover lrwxrwxrwx 1 root root 6 Jul 20 2020 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Jul 20 2020 bzmore -rwxr-xr-x 1 root root 43936 Sep 23 2020 cat -rwxr-xr-x 1 root root 72672 Sep 23 2020 chgrp -rwxr-xr-x 1 root root 64448 Sep 23 2020 chmod -rwxr-xr-x 1 root root 72672 Sep 23 2020 chown -rwxr-xr-x 1 root root 151168 Sep 23 2020 cp -rwxr-xr-x 1 root root 125560 Dec 10 2020 dash -rwxr-xr-x 1 root root 113664 Sep 23 2020 date -rwxr-xr-x 1 root root 80968 Sep 23 2020 dd -rwxr-xr-x 1 root root 93936 Sep 23 2020 df -rwxr-xr-x 1 root root 147176 Sep 23 2020 dir -rwxr-xr-x 1 root root 84440 Jul 28 07:09 dmesg lrwxrwxrwx 1 root root 8 Nov 6 2019 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Nov 6 2019 domainname -> hostname -rwxr-xr-x 1 root root 39712 Sep 23 2020 echo -rwxr-xr-x 1 root root 28 Nov 9 2020 egrep -rwxr-xr-x 1 root root 39680 Sep 23 2020 false -rwxr-xr-x 1 root root 28 Nov 9 2020 fgrep -rwxr-xr-x 1 root root 69032 Jul 28 07:09 findmnt -rwsr-xr-x 1 root root 34896 Feb 26 2021 fusermount -rwxr-xr-x 1 root root 203072 Nov 9 2020 grep -rwxr-xr-x 2 root root 2346 Mar 2 2021 gunzip -rwxr-xr-x 1 root root 6376 Mar 2 2021 gzexe -rwxr-xr-x 1 root root 98048 Mar 2 2021 gzip -rwxr-xr-x 1 root root 22600 Nov 6 2019 hostname -rwxr-xr-x 1 root root 72840 Sep 23 2020 ln -rwxr-xr-x 1 root root 56952 Feb 7 2020 login -rwxr-xr-x 1 root root 147176 Sep 23 2020 ls -rwxr-xr-x 1 root root 149736 Jul 28 07:09 lsblk -rwxr-xr-x 1 root root 85184 Sep 23 2020 mkdir -rwxr-xr-x 1 root root 76896 Sep 23 2020 mknod -rwxr-xr-x 1 root root 48064 Sep 23 2020 mktemp -rwxr-xr-x 1 root root 59632 Jul 28 07:09 more -rwsr-xr-x 1 root root 55528 Jul 28 07:09 mount -rwxr-xr-x 1 root root 18664 Jul 28 07:09 mountpoint -rwxr-xr-x 1 root root 147080 Sep 23 2020 mv lrwxrwxrwx 1 root root 8 Nov 6 2019 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Apr 18 2021 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 43872 Sep 23 2020 pwd lrwxrwxrwx 1 root root 4 Aug 4 08:25 rbash -> bash -rwxr-xr-x 1 root root 52032 Sep 23 2020 readlink -rwxr-xr-x 1 root root 72704 Sep 23 2020 rm -rwxr-xr-x 1 root root 52032 Sep 23 2020 rmdir -rwxr-xr-x 1 root root 27472 Sep 27 2020 run-parts -rwxr-xr-x 1 root root 122224 Dec 22 2018 sed lrwxrwxrwx 1 root root 4 Oct 20 23:41 sh -> dash -rwxr-xr-x 1 root root 43808 Sep 23 2020 sleep -rwxr-xr-x 1 root root 84928 Sep 23 2020 stty -rwsr-xr-x 1 root root 71912 Jul 28 07:09 su -rwxr-xr-x 1 root root 39744 Sep 23 2020 sync -rwxr-xr-x 1 root root 531928 Feb 16 2021 tar -rwxr-xr-x 1 root root 14456 Sep 27 2020 tempfile -rwxr-xr-x 1 root root 101408 Sep 23 2020 touch -rwxr-xr-x 1 root root 39680 Sep 23 2020 true -rwxr-xr-x 1 root root 14328 Feb 26 2021 ulockmgr_server -rwsr-xr-x 1 root root 35040 Jul 28 07:09 umount -rwxr-xr-x 1 root root 39744 Sep 23 2020 uname -rwxr-xr-x 2 root root 2346 Mar 2 2021 uncompress -rwxr-xr-x 1 root root 147176 Sep 23 2020 vdir -rwxr-xr-x 1 root root 63744 Jul 28 07:09 wdctl lrwxrwxrwx 1 root root 8 Nov 6 2019 ypdomainname -> hostname -rwxr-xr-x 1 root root 1984 Mar 2 2021 zcat -rwxr-xr-x 1 root root 1678 Mar 2 2021 zcmp -rwxr-xr-x 1 root root 5880 Mar 2 2021 zdiff -rwxr-xr-x 1 root root 29 Mar 2 2021 zegrep -rwxr-xr-x 1 root root 29 Mar 2 2021 zfgrep -rwxr-xr-x 1 root root 2081 Mar 2 2021 zforce -rwxr-xr-x 1 root root 7585 Mar 2 2021 zgrep -rwxr-xr-x 1 root root 2206 Mar 2 2021 zless -rwxr-xr-x 1 root root 1842 Mar 2 2021 zmore -rwxr-xr-x 1 root root 4553 Mar 2 2021 znew I: user script /srv/workspace/pbuilder/1335426/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 12), libsuma-dev dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19655 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 12); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on libsuma-dev; however: Package libsuma-dev is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libdebhelper-perl{a} libelf1{a} libfile-stripnondeterminism-perl{a} libicu67{a} libmagic-mgc{a} libmagic1{a} libpipeline1{a} libsigsegv2{a} libsub-override-perl{a} libsuma-dev{a} libsuma1{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 33 newly installed, 0 to remove and 0 not upgraded. Need to get 18.4 MB of archives. After unpacking 68.0 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian bullseye/main amd64 bsdextrautils amd64 2.36.1-8 [145 kB] Get: 2 http://deb.debian.org/debian bullseye/main amd64 libuchardet0 amd64 0.0.7-1 [67.8 kB] Get: 3 http://deb.debian.org/debian bullseye/main amd64 groff-base amd64 1.22.4-6 [936 kB] Get: 4 http://deb.debian.org/debian bullseye/main amd64 libpipeline1 amd64 1.5.3-1 [34.3 kB] Get: 5 http://deb.debian.org/debian bullseye/main amd64 man-db amd64 2.9.4-2 [1354 kB] Get: 6 http://deb.debian.org/debian bullseye/main amd64 sensible-utils all 0.0.14 [14.8 kB] Get: 7 http://deb.debian.org/debian bullseye/main amd64 libmagic-mgc amd64 1:5.39-3 [273 kB] Get: 8 http://deb.debian.org/debian bullseye/main amd64 libmagic1 amd64 1:5.39-3 [126 kB] Get: 9 http://deb.debian.org/debian bullseye/main amd64 file amd64 1:5.39-3 [69.1 kB] Get: 10 http://deb.debian.org/debian bullseye/main amd64 gettext-base amd64 0.21-4 [175 kB] Get: 11 http://deb.debian.org/debian bullseye/main amd64 libsigsegv2 amd64 2.13-1 [34.8 kB] Get: 12 http://deb.debian.org/debian bullseye/main amd64 m4 amd64 1.4.18-5 [204 kB] Get: 13 http://deb.debian.org/debian bullseye/main amd64 autoconf all 2.69-14 [313 kB] Get: 14 http://deb.debian.org/debian bullseye/main amd64 autotools-dev all 20180224.1+nmu1 [77.1 kB] Get: 15 http://deb.debian.org/debian bullseye/main amd64 automake all 1:1.16.3-2 [814 kB] Get: 16 http://deb.debian.org/debian bullseye/main amd64 autopoint all 0.21-4 [510 kB] Get: 17 http://deb.debian.org/debian bullseye/main amd64 libdebhelper-perl all 13.3.4 [189 kB] Get: 18 http://deb.debian.org/debian bullseye/main amd64 libtool all 2.4.6-15 [513 kB] Get: 19 http://deb.debian.org/debian bullseye/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 20 http://deb.debian.org/debian bullseye/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 21 http://deb.debian.org/debian bullseye/main amd64 libsub-override-perl all 0.09-2 [10.2 kB] Get: 22 http://deb.debian.org/debian bullseye/main amd64 libfile-stripnondeterminism-perl all 1.12.0-1 [26.3 kB] Get: 23 http://deb.debian.org/debian bullseye/main amd64 dh-strip-nondeterminism all 1.12.0-1 [15.4 kB] Get: 24 http://deb.debian.org/debian bullseye/main amd64 libelf1 amd64 0.183-1 [165 kB] Get: 25 http://deb.debian.org/debian bullseye/main amd64 dwz amd64 0.13+20210201-1 [175 kB] Get: 26 http://deb.debian.org/debian bullseye/main amd64 libicu67 amd64 67.1-7 [8622 kB] Get: 27 http://deb.debian.org/debian bullseye/main amd64 libxml2 amd64 2.9.10+dfsg-6.7 [693 kB] Get: 28 http://deb.debian.org/debian bullseye/main amd64 gettext amd64 0.21-4 [1311 kB] Get: 29 http://deb.debian.org/debian bullseye/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get: 30 http://deb.debian.org/debian bullseye/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 31 http://deb.debian.org/debian bullseye/main amd64 debhelper all 13.3.4 [1049 kB] Get: 32 http://deb.debian.org/debian bullseye/main amd64 libsuma1 amd64 1.0.36-2 [30.4 kB] Get: 33 http://deb.debian.org/debian bullseye/main amd64 libsuma-dev amd64 1.0.36-2 [40.6 kB] Fetched 18.4 MB in 1min 52s (165 kB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package bsdextrautils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19655 files and directories currently installed.) Preparing to unpack .../00-bsdextrautils_2.36.1-8_amd64.deb ... Unpacking bsdextrautils (2.36.1-8) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../01-libuchardet0_0.0.7-1_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../02-groff-base_1.22.4-6_amd64.deb ... Unpacking groff-base (1.22.4-6) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../03-libpipeline1_1.5.3-1_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.3-1) ... Selecting previously unselected package man-db. Preparing to unpack .../04-man-db_2.9.4-2_amd64.deb ... Unpacking man-db (2.9.4-2) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../05-sensible-utils_0.0.14_all.deb ... Unpacking sensible-utils (0.0.14) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../06-libmagic-mgc_1%3a5.39-3_amd64.deb ... Unpacking libmagic-mgc (1:5.39-3) ... Selecting previously unselected package libmagic1:amd64. Preparing to unpack .../07-libmagic1_1%3a5.39-3_amd64.deb ... Unpacking libmagic1:amd64 (1:5.39-3) ... Selecting previously unselected package file. Preparing to unpack .../08-file_1%3a5.39-3_amd64.deb ... Unpacking file (1:5.39-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../09-gettext-base_0.21-4_amd64.deb ... Unpacking gettext-base (0.21-4) ... Selecting previously unselected package libsigsegv2:amd64. Preparing to unpack .../10-libsigsegv2_2.13-1_amd64.deb ... Unpacking libsigsegv2:amd64 (2.13-1) ... Selecting previously unselected package m4. Preparing to unpack .../11-m4_1.4.18-5_amd64.deb ... Unpacking m4 (1.4.18-5) ... Selecting previously unselected package autoconf. Preparing to unpack .../12-autoconf_2.69-14_all.deb ... Unpacking autoconf (2.69-14) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../13-autotools-dev_20180224.1+nmu1_all.deb ... Unpacking autotools-dev (20180224.1+nmu1) ... Selecting previously unselected package automake. Preparing to unpack .../14-automake_1%3a1.16.3-2_all.deb ... Unpacking automake (1:1.16.3-2) ... Selecting previously unselected package autopoint. Preparing to unpack .../15-autopoint_0.21-4_all.deb ... Unpacking autopoint (0.21-4) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../16-libdebhelper-perl_13.3.4_all.deb ... Unpacking libdebhelper-perl (13.3.4) ... Selecting previously unselected package libtool. Preparing to unpack .../17-libtool_2.4.6-15_all.deb ... Unpacking libtool (2.4.6-15) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../18-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../19-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libsub-override-perl. Preparing to unpack .../20-libsub-override-perl_0.09-2_all.deb ... Unpacking libsub-override-perl (0.09-2) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../21-libfile-stripnondeterminism-perl_1.12.0-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.12.0-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../22-dh-strip-nondeterminism_1.12.0-1_all.deb ... Unpacking dh-strip-nondeterminism (1.12.0-1) ... Selecting previously unselected package libelf1:amd64. Preparing to unpack .../23-libelf1_0.183-1_amd64.deb ... Unpacking libelf1:amd64 (0.183-1) ... Selecting previously unselected package dwz. Preparing to unpack .../24-dwz_0.13+20210201-1_amd64.deb ... Unpacking dwz (0.13+20210201-1) ... Selecting previously unselected package libicu67:amd64. Preparing to unpack .../25-libicu67_67.1-7_amd64.deb ... Unpacking libicu67:amd64 (67.1-7) ... Selecting previously unselected package libxml2:amd64. Preparing to unpack .../26-libxml2_2.9.10+dfsg-6.7_amd64.deb ... Unpacking libxml2:amd64 (2.9.10+dfsg-6.7) ... Selecting previously unselected package gettext. Preparing to unpack .../27-gettext_0.21-4_amd64.deb ... Unpacking gettext (0.21-4) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../28-intltool-debian_0.35.0+20060710.5_all.deb ... Unpacking intltool-debian (0.35.0+20060710.5) ... Selecting previously unselected package po-debconf. Preparing to unpack .../29-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../30-debhelper_13.3.4_all.deb ... Unpacking debhelper (13.3.4) ... Selecting previously unselected package libsuma1. Preparing to unpack .../31-libsuma1_1.0.36-2_amd64.deb ... Unpacking libsuma1 (1.0.36-2) ... Selecting previously unselected package libsuma-dev. Preparing to unpack .../32-libsuma-dev_1.0.36-2_amd64.deb ... Unpacking libsuma-dev (1.0.36-2) ... Setting up libpipeline1:amd64 (1.5.3-1) ... Setting up bsdextrautils (2.36.1-8) ... update-alternatives: using /usr/bin/write.ul to provide /usr/bin/write (write) in auto mode Setting up libicu67:amd64 (67.1-7) ... Setting up libmagic-mgc (1:5.39-3) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.3.4) ... Setting up libmagic1:amd64 (1:5.39-3) ... Setting up gettext-base (0.21-4) ... Setting up file (1:5.39-3) ... Setting up autotools-dev (20180224.1+nmu1) ... Setting up libsigsegv2:amd64 (2.13-1) ... Setting up autopoint (0.21-4) ... Setting up sensible-utils (0.0.14) ... Setting up libsuma1 (1.0.36-2) ... Setting up libuchardet0:amd64 (0.0.7-1) ... Setting up libsub-override-perl (0.09-2) ... Setting up libelf1:amd64 (0.183-1) ... Setting up libxml2:amd64 (2.9.10+dfsg-6.7) ... Setting up libfile-stripnondeterminism-perl (1.12.0-1) ... Setting up gettext (0.21-4) ... Setting up libtool (2.4.6-15) ... Setting up libsuma-dev (1.0.36-2) ... Setting up m4 (1.4.18-5) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up autoconf (2.69-14) ... Setting up dh-strip-nondeterminism (1.12.0-1) ... Setting up dwz (0.13+20210201-1) ... Setting up groff-base (1.22.4-6) ... Setting up automake (1:1.16.3-2) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.9.4-2) ... Not building database; man-db/auto-update is not 'true'. Setting up dh-autoreconf (20) ... Setting up debhelper (13.3.4) ... Processing triggers for libc-bin (2.31-13+deb11u2) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/sumaclust-1.0.36+ds/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../sumaclust_1.0.36+ds-1_source.changes dpkg-buildpackage: info: source package sumaclust dpkg-buildpackage: info: source version 1.0.36+ds-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Pierre Gruet dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean dh_auto_clean make -j15 clean make[1]: Entering directory '/build/sumaclust-1.0.36+ds' rm -f sumaclust.o mtcompare_sumaclust.o rm -f sumaclust make[1]: Leaving directory '/build/sumaclust-1.0.36+ds' dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf dh_auto_configure dh_auto_build make -j15 "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/sumaclust-1.0.36+ds' gcc -I/usr/include -g -O3 -s -DOMP_SUPPORT -fopenmp -w -I/build/sumaclust-1.0.36+ds/sumalibs -c -o sumaclust.o sumaclust.c -lsuma -lm gcc -I/usr/include -g -O3 -s -DOMP_SUPPORT -fopenmp -w -I/build/sumaclust-1.0.36+ds/sumalibs -c -o mtcompare_sumaclust.o mtcompare_sumaclust.c -lsuma -lm gcc -Wl,-z,relro -Wl,-z,now -o sumaclust -fopenmp sumaclust.o mtcompare_sumaclust.o -lsuma -lm make[1]: Leaving directory '/build/sumaclust-1.0.36+ds' dh_auto_test create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install make -j15 install DESTDIR=/build/sumaclust-1.0.36\+ds/debian/sumaclust AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/sumaclust-1.0.36+ds' install -d /build/sumaclust-1.0.36+ds/debian/sumaclust/usr/bin/ install -m 755 sumaclust /build/sumaclust-1.0.36+ds/debian/sumaclust/usr/bin/ make[1]: Leaving directory '/build/sumaclust-1.0.36+ds' dh_install dh_installdocs dh_installchangelogs dh_installexamples dh_installman dh_perl dh_link dh_strip_nondeterminism debian/rules override_dh_compress make[1]: Entering directory '/build/sumaclust-1.0.36+ds' dh_compress --exclude=.pdf make[1]: Leaving directory '/build/sumaclust-1.0.36+ds' dh_fixperms dh_missing dh_dwz dh_strip dh_makeshlibs dh_shlibdeps dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'sumaclust' in '../sumaclust_1.0.36+ds-1_amd64.deb'. dpkg-deb: building package 'sumaclust-dbgsym' in '../sumaclust-dbgsym_1.0.36+ds-1_amd64.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../sumaclust_1.0.36+ds-1_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/1335426 and its subdirectories I: Current time: Sat Nov 20 18:05:10 -12 2021 I: pbuilder-time-stamp: 1637474710 Sun Nov 21 06:05:10 UTC 2021 I: 1st build successful. Starting 2nd build on remote node ionos5-amd64.debian.net. Sun Nov 21 06:05:10 UTC 2021 I: Preparing to do remote build '2' on ionos5-amd64.debian.net. Sun Nov 21 06:05:41 UTC 2021 I: Deleting $TMPDIR on ionos5-amd64.debian.net. Sun Nov 21 06:05:41 UTC 2021 I: sumaclust_1.0.36+ds-1_amd64.changes: Format: 1.8 Date: Tue, 14 Apr 2020 13:43:47 +0200 Source: sumaclust Binary: sumaclust sumaclust-dbgsym Architecture: amd64 Version: 1.0.36+ds-1 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Pierre Gruet Description: sumaclust - fast and exact clustering of genomic sequences Changes: sumaclust (1.0.36+ds-1) unstable; urgency=medium . * New upstream version 1.0.36+ds * Adding build-dependency on libsuma-dev * Deleting now useless dh_clean override * Patching to use Debian packaged sumalibs * Updating debian/watch to fit new +ds version Checksums-Sha1: 99c33d3c055b12c440f17a45e035936c1d2665fe 23864 sumaclust-dbgsym_1.0.36+ds-1_amd64.deb a169c9f24b2d769b12fbb7da8681eccf09f7ca5b 5087 sumaclust_1.0.36+ds-1_amd64.buildinfo 4e08c21d19b8c6245d89856f5d5327abd5d4cf6a 102804 sumaclust_1.0.36+ds-1_amd64.deb Checksums-Sha256: ea831089b89ac68dccb8a901f8a2982574f5d55ec98ead0b97d420891415a9ef 23864 sumaclust-dbgsym_1.0.36+ds-1_amd64.deb 5691338fce91ab2cbc3f57ae9c854773e1cbdde71c9efc296abc299f5a5c5fba 5087 sumaclust_1.0.36+ds-1_amd64.buildinfo 652c594868f31dcabb7ddcb5f2320fdf268c4330e8138df50dfedd71419c4e58 102804 sumaclust_1.0.36+ds-1_amd64.deb Files: b5f8d005f67bdc1f7d3d8c7c2b384378 23864 debug optional sumaclust-dbgsym_1.0.36+ds-1_amd64.deb 097114404c846b6a6813834eb30bd5d3 5087 science optional sumaclust_1.0.36+ds-1_amd64.buildinfo e9174d1fc6bb256d8332067a0d8c105b 102804 science optional sumaclust_1.0.36+ds-1_amd64.deb Sun Nov 21 06:05:43 UTC 2021 I: will be used to compare the two builds: # Profiling output for: /usr/bin/diffoscope --html /srv/reproducible-results/rbuild-debian/tmp.rabs2ShjLy/sumaclust_1.0.36+ds-1.diffoscope.html --text /srv/reproducible-results/rbuild-debian/tmp.rabs2ShjLy/sumaclust_1.0.36+ds-1.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/tmp.rabs2ShjLy/sumaclust_1.0.36+ds-1.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/tmp.rabs2ShjLy/b1/sumaclust_1.0.36+ds-1_amd64.changes /srv/reproducible-results/rbuild-debian/tmp.rabs2ShjLy/b2/sumaclust_1.0.36+ds-1_amd64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.590s) 0.590s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.026s) 0.026s 10 calls diffoscope.comparators.binary.FilesystemFile 0.000s 8 calls abc.DotChangesFile Sun Nov 21 06:05:44 UTC 2021 I: found no differences in the changes files, and a .buildinfo file also exists. Sun Nov 21 06:05:44 UTC 2021 I: sumaclust from bullseye built successfully and reproducibly on amd64. Sun Nov 21 06:05:46 UTC 2021 I: Submitting .buildinfo files to external archives: Sun Nov 21 06:05:46 UTC 2021 I: Submitting 8.0K b1/sumaclust_1.0.36+ds-1_amd64.buildinfo.asc Sun Nov 21 06:05:47 UTC 2021 I: Submitting 8.0K b2/sumaclust_1.0.36+ds-1_amd64.buildinfo.asc Sun Nov 21 06:05:47 UTC 2021 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Sun Nov 21 06:05:47 UTC 2021 I: Done submitting .buildinfo files. Sun Nov 21 06:05:47 UTC 2021 I: Removing signed sumaclust_1.0.36+ds-1_amd64.buildinfo.asc files: removed './b1/sumaclust_1.0.36+ds-1_amd64.buildinfo.asc' removed './b2/sumaclust_1.0.36+ds-1_amd64.buildinfo.asc'