Sat Jul 13 12:24:14 UTC 2024 I: starting to build r-cran-seurat/bullseye/amd64 on jenkins on '2024-07-13 12:23' Sat Jul 13 12:24:14 UTC 2024 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/amd64_34/18677/console.log Sat Jul 13 12:24:14 UTC 2024 I: Downloading source for bullseye/r-cran-seurat=4.0.0-2 --2024-07-13 12:24:14-- http://cdn-fastly.deb.debian.org/debian/pool/main/r/r-cran-seurat/r-cran-seurat_4.0.0-2.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2839 (2.8K) [text/prs.lines.tag] Saving to: ‘r-cran-seurat_4.0.0-2.dsc’ 0K .. 100% 286M=0s 2024-07-13 12:24:14 (286 MB/s) - ‘r-cran-seurat_4.0.0-2.dsc’ saved [2839/2839] Sat Jul 13 12:24:14 UTC 2024 I: r-cran-seurat_4.0.0-2.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: r-cran-seurat Binary: r-cran-seurat Architecture: any Version: 4.0.0-2 Maintainer: Debian R Packages Maintainers Uploaders: Steffen Moeller Homepage: https://cran.r-project.org/package=Seurat Standards-Version: 4.5.1 Vcs-Browser: https://salsa.debian.org/r-pkg-team/r-cran-seurat Vcs-Git: https://salsa.debian.org/r-pkg-team/r-cran-seurat.git Testsuite: autopkgtest, autopkgtest-pkg-r Testsuite-Triggers: r-cran-hdf5r, r-cran-testthat Build-Depends: debhelper-compat (= 13), dh-r, r-base-dev, r-cran-cluster, r-cran-cowplot, r-cran-fitdistrplus, r-cran-future, r-cran-future.apply, r-cran-ggplot2 (>= 3.3.0), r-cran-ggrepel, r-cran-ggridges, r-cran-httr, r-cran-ica, r-cran-igraph, r-cran-irlba, r-cran-jsonlite, r-cran-kernsmooth, r-cran-leiden, r-cran-lmtest, r-cran-mass, r-cran-matrix (>= 1.2-14), r-cran-matrixstats, r-cran-miniui, r-cran-patchwork, r-cran-pbapply, r-cran-plotly (>= 4.9.0), r-cran-png, r-cran-rann, r-cran-rcolorbrewer, r-cran-rcpp, r-cran-rcppannoy, r-cran-reticulate, r-cran-rlang, r-cran-rocr, r-cran-rsvd, r-cran-rtsne, r-cran-scales, r-cran-sctransform, r-cran-shiny, r-cran-spatstat, r-cran-tibble, r-cran-uwot, r-cran-rcppeigen, r-cran-rcppprogress, r-cran-scattermore, r-cran-seuratobject Package-List: r-cran-seurat deb gnu-r optional arch=any Checksums-Sha1: 5bf6815648b5c844d5256a1ed9fdf04b189d1d34 1441079 r-cran-seurat_4.0.0.orig.tar.gz f0b282a49e97cc5f282a178c946851b5e5705bda 4068 r-cran-seurat_4.0.0-2.debian.tar.xz Checksums-Sha256: b67530681ba14d0531b148dd96a8dddfddf99d2e3ea3164821f2d70580bfe3d6 1441079 r-cran-seurat_4.0.0.orig.tar.gz d0ef191c70f8a801bc3072877436f7d4a4092f75701085b1d67a3c8a01502b53 4068 r-cran-seurat_4.0.0-2.debian.tar.xz Files: ca29c3b8fb0f27eff329d18f5e6094e0 1441079 r-cran-seurat_4.0.0.orig.tar.gz e2f41a55663036b695855cc9ca4560dd 4068 r-cran-seurat_4.0.0-2.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCgAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAmAjjxsRHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtHgaQ//S3/ikp7yG5sH1PB5LAEL2rNY50MIPZY5 wJMvUxlf9ObQfArjVSZ42+p1pAouHqvOxff1DPIiIR04APqD4EVJKe0KY23M+0qa Bpc/RwAIBqk0ayf0ZBheR7A3hBkmPUeZwyswqnvGFTXZq/7o8lIi0Tr5BH2jCmUu jaxjgT7LtuhDgYZBhWTdjqy1yYSuaL+YNK7FCHhOxUxEHiQpugEZSRvJwRqgbqDC f9ompLnoU1l6iuKwMFmmuA9Lc5E70fWekali1L1zH5zbJjZGB0UDM+jWJxuXxupK iYw9fXv3Wr3mkSZMCQHSmVl5NgJhAr+LIjm9tYx/IkjRIdYLXUK7LPsRXSitrMPV zDy1TE+ZoQC7B+RQEMq39NPeyamGOB6j//oa+ATFXIsjfcK156V3PONoEieDwZJa bFP8NqgexIEJRIYYs+aA69XEh7sLyU14BVfZ3RtugxlXGBxQHtZ2vUcJowtR0PMO nvnRdXWTfFFD/M3DDcEgHTx9AgxKFAoSrEzG3dDVxi7YOhH5AfOqatzn0nFagCSE YTXae/BibV73dsgloLsmc5GFxT2aJsT9k1gQfVZgWWrzMUaP6sYxKFTSYgpeae8z ZPRdMqAjSmgw7eAR3m891RYZV9oGsbqpob6Q9GKw8YwBwv2tbgKUAiXqbW27VjjV VNJ/t+OIcQk= =tPk2 -----END PGP SIGNATURE----- Sat Jul 13 12:24:14 UTC 2024 I: Checking whether the package is not for us Sat Jul 13 12:24:14 UTC 2024 I: Starting 1st build on remote node infom02-amd64.debian.net. Sat Jul 13 12:24:14 UTC 2024 I: Preparing to do remote build '1' on infom02-amd64.debian.net. Sat Jul 13 12:28:10 UTC 2024 I: Deleting $TMPDIR on infom02-amd64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Fri Aug 15 06:47:16 -12 2025 I: pbuilder-time-stamp: 1755283636 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bullseye-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [r-cran-seurat_4.0.0-2.dsc] I: copying [./r-cran-seurat_4.0.0.orig.tar.gz] I: copying [./r-cran-seurat_4.0.0-2.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/tmp/dpkg-verify-sig.vW61K6ci/trustedkeys.kbx': General error gpgv: Signature made Tue Feb 9 19:45:31 2021 -12 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./r-cran-seurat_4.0.0-2.dsc dpkg-source: info: extracting r-cran-seurat in r-cran-seurat-4.0.0 dpkg-source: info: unpacking r-cran-seurat_4.0.0.orig.tar.gz dpkg-source: info: unpacking r-cran-seurat_4.0.0-2.debian.tar.xz I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/3681494/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='amd64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=12 ' DISTRIBUTION='bullseye' HOME='/root' HOST_ARCH='amd64' IFS=' ' INVOCATION_ID='9203aba4b94e48308222410426bcfd6d' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='3681494' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.jPKBxrr4/pbuilderrc_UeLT --distribution bullseye --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.jPKBxrr4/b1 --logfile b1/build.log r-cran-seurat_4.0.0-2.dsc' SUDO_GID='109' SUDO_UID='104' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' I: uname -a Linux infom02-amd64 6.7.12+bpo-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.7.12-1~bpo12+1 (2024-05-06) x86_64 GNU/Linux I: ls -l /bin total 5476 -rwxr-xr-x 1 root root 1234376 Mar 27 2022 bash -rwxr-xr-x 3 root root 38984 Jul 20 2020 bunzip2 -rwxr-xr-x 3 root root 38984 Jul 20 2020 bzcat lrwxrwxrwx 1 root root 6 Jul 20 2020 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2225 Jul 20 2020 bzdiff lrwxrwxrwx 1 root root 6 Jul 20 2020 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4877 Sep 4 2019 bzexe lrwxrwxrwx 1 root root 6 Jul 20 2020 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3775 Jul 20 2020 bzgrep -rwxr-xr-x 3 root root 38984 Jul 20 2020 bzip2 -rwxr-xr-x 1 root root 18424 Jul 20 2020 bzip2recover lrwxrwxrwx 1 root root 6 Jul 20 2020 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Jul 20 2020 bzmore -rwxr-xr-x 1 root root 43936 Sep 23 2020 cat -rwxr-xr-x 1 root root 72672 Sep 23 2020 chgrp -rwxr-xr-x 1 root root 64448 Sep 23 2020 chmod -rwxr-xr-x 1 root root 72672 Sep 23 2020 chown -rwxr-xr-x 1 root root 151168 Sep 23 2020 cp -rwxr-xr-x 1 root root 125560 Dec 10 2020 dash -rwxr-xr-x 1 root root 113664 Sep 23 2020 date -rwxr-xr-x 1 root root 80968 Sep 23 2020 dd -rwxr-xr-x 1 root root 93936 Sep 23 2020 df -rwxr-xr-x 1 root root 147176 Sep 23 2020 dir -rwxr-xr-x 1 root root 84440 Mar 27 2024 dmesg lrwxrwxrwx 1 root root 8 Nov 6 2019 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Nov 6 2019 domainname -> hostname -rwxr-xr-x 1 root root 39712 Sep 23 2020 echo -rwxr-xr-x 1 root root 28 Jan 24 2023 egrep -rwxr-xr-x 1 root root 39680 Sep 23 2020 false -rwxr-xr-x 1 root root 28 Jan 24 2023 fgrep -rwxr-xr-x 1 root root 69032 Mar 27 2024 findmnt -rwsr-xr-x 1 root root 34896 Feb 26 2021 fusermount -rwxr-xr-x 1 root root 203072 Jan 24 2023 grep -rwxr-xr-x 2 root root 2346 Apr 9 2022 gunzip -rwxr-xr-x 1 root root 6447 Apr 9 2022 gzexe -rwxr-xr-x 1 root root 98048 Apr 9 2022 gzip -rwxr-xr-x 1 root root 22600 Nov 6 2019 hostname -rwxr-xr-x 1 root root 72840 Sep 23 2020 ln -rwxr-xr-x 1 root root 56952 Feb 7 2020 login -rwxr-xr-x 1 root root 147176 Sep 23 2020 ls -rwxr-xr-x 1 root root 149736 Mar 27 2024 lsblk -rwxr-xr-x 1 root root 85184 Sep 23 2020 mkdir -rwxr-xr-x 1 root root 76896 Sep 23 2020 mknod -rwxr-xr-x 1 root root 48064 Sep 23 2020 mktemp -rwxr-xr-x 1 root root 59632 Mar 27 2024 more -rwsr-xr-x 1 root root 55528 Mar 27 2024 mount -rwxr-xr-x 1 root root 18664 Mar 27 2024 mountpoint -rwxr-xr-x 1 root root 147080 Sep 23 2020 mv lrwxrwxrwx 1 root root 8 Nov 6 2019 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Dec 16 2021 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 43872 Sep 23 2020 pwd lrwxrwxrwx 1 root root 4 Mar 27 2022 rbash -> bash -rwxr-xr-x 1 root root 52032 Sep 23 2020 readlink -rwxr-xr-x 1 root root 72704 Sep 23 2020 rm -rwxr-xr-x 1 root root 52032 Sep 23 2020 rmdir -rwxr-xr-x 1 root root 27472 Sep 27 2020 run-parts -rwxr-xr-x 1 root root 122224 Dec 22 2018 sed lrwxrwxrwx 1 root root 4 Aug 9 03:47 sh -> dash -rwxr-xr-x 1 root root 43808 Sep 23 2020 sleep -rwxr-xr-x 1 root root 84928 Sep 23 2020 stty -rwsr-xr-x 1 root root 71912 Mar 27 2024 su -rwxr-xr-x 1 root root 39744 Sep 23 2020 sync -rwxr-xr-x 1 root root 531928 Jan 19 2024 tar -rwxr-xr-x 1 root root 14456 Sep 27 2020 tempfile -rwxr-xr-x 1 root root 101408 Sep 23 2020 touch -rwxr-xr-x 1 root root 39680 Sep 23 2020 true -rwxr-xr-x 1 root root 14328 Feb 26 2021 ulockmgr_server -rwsr-xr-x 1 root root 35040 Mar 27 2024 umount -rwxr-xr-x 1 root root 39744 Sep 23 2020 uname -rwxr-xr-x 2 root root 2346 Apr 9 2022 uncompress -rwxr-xr-x 1 root root 147176 Sep 23 2020 vdir -rwxr-xr-x 1 root root 63744 Mar 27 2024 wdctl lrwxrwxrwx 1 root root 8 Nov 6 2019 ypdomainname -> hostname -rwxr-xr-x 1 root root 1984 Apr 9 2022 zcat -rwxr-xr-x 1 root root 1678 Apr 9 2022 zcmp -rwxr-xr-x 1 root root 5898 Apr 9 2022 zdiff -rwxr-xr-x 1 root root 29 Apr 9 2022 zegrep -rwxr-xr-x 1 root root 29 Apr 9 2022 zfgrep -rwxr-xr-x 1 root root 2081 Apr 9 2022 zforce -rwxr-xr-x 1 root root 8049 Apr 9 2022 zgrep -rwxr-xr-x 1 root root 2206 Apr 9 2022 zless -rwxr-xr-x 1 root root 1842 Apr 9 2022 zmore -rwxr-xr-x 1 root root 4577 Apr 9 2022 znew I: user script /srv/workspace/pbuilder/3681494/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-r, r-base-dev, r-cran-cluster, r-cran-cowplot, r-cran-fitdistrplus, r-cran-future, r-cran-future.apply, r-cran-ggplot2 (>= 3.3.0), r-cran-ggrepel, r-cran-ggridges, r-cran-httr, r-cran-ica, r-cran-igraph, r-cran-irlba, r-cran-jsonlite, r-cran-kernsmooth, r-cran-leiden, r-cran-lmtest, r-cran-mass, r-cran-matrix (>= 1.2-14), r-cran-matrixstats, r-cran-miniui, r-cran-patchwork, r-cran-pbapply, r-cran-plotly (>= 4.9.0), r-cran-png, r-cran-rann, r-cran-rcolorbrewer, r-cran-rcpp, r-cran-rcppannoy, r-cran-reticulate, r-cran-rlang, r-cran-rocr, r-cran-rsvd, r-cran-rtsne, r-cran-scales, r-cran-sctransform, r-cran-shiny, r-cran-spatstat, r-cran-tibble, r-cran-uwot, r-cran-rcppeigen, r-cran-rcppprogress, r-cran-scattermore, r-cran-seuratobject dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19711 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-r; however: Package dh-r is not installed. pbuilder-satisfydepends-dummy depends on r-base-dev; however: Package r-base-dev is not installed. pbuilder-satisfydepends-dummy depends on r-cran-cluster; however: Package r-cran-cluster is not installed. pbuilder-satisfydepends-dummy depends on r-cran-cowplot; however: Package r-cran-cowplot is not installed. pbuilder-satisfydepends-dummy depends on r-cran-fitdistrplus; however: Package r-cran-fitdistrplus is not installed. pbuilder-satisfydepends-dummy depends on r-cran-future; however: Package r-cran-future is not installed. pbuilder-satisfydepends-dummy depends on r-cran-future.apply; however: Package r-cran-future.apply is not installed. pbuilder-satisfydepends-dummy depends on r-cran-ggplot2 (>= 3.3.0); however: Package r-cran-ggplot2 is not installed. pbuilder-satisfydepends-dummy depends on r-cran-ggrepel; however: Package r-cran-ggrepel is not installed. pbuilder-satisfydepends-dummy depends on r-cran-ggridges; however: Package r-cran-ggridges is not installed. pbuilder-satisfydepends-dummy depends on r-cran-httr; however: Package r-cran-httr is not installed. pbuilder-satisfydepends-dummy depends on r-cran-ica; however: Package r-cran-ica is not installed. pbuilder-satisfydepends-dummy depends on r-cran-igraph; however: Package r-cran-igraph is not installed. pbuilder-satisfydepends-dummy depends on r-cran-irlba; however: Package r-cran-irlba is not installed. pbuilder-satisfydepends-dummy depends on r-cran-jsonlite; however: Package r-cran-jsonlite is not installed. pbuilder-satisfydepends-dummy depends on r-cran-kernsmooth; however: Package r-cran-kernsmooth is not installed. pbuilder-satisfydepends-dummy depends on r-cran-leiden; however: Package r-cran-leiden is not installed. pbuilder-satisfydepends-dummy depends on r-cran-lmtest; however: Package r-cran-lmtest is not installed. pbuilder-satisfydepends-dummy depends on r-cran-mass; however: Package r-cran-mass is not installed. pbuilder-satisfydepends-dummy depends on r-cran-matrix (>= 1.2-14); however: Package r-cran-matrix is not installed. pbuilder-satisfydepends-dummy depends on r-cran-matrixstats; however: Package r-cran-matrixstats is not installed. pbuilder-satisfydepends-dummy depends on r-cran-miniui; however: Package r-cran-miniui is not installed. pbuilder-satisfydepends-dummy depends on r-cran-patchwork; however: Package r-cran-patchwork is not installed. pbuilder-satisfydepends-dummy depends on r-cran-pbapply; however: Package r-cran-pbapply is not installed. pbuilder-satisfydepends-dummy depends on r-cran-plotly (>= 4.9.0); however: Package r-cran-plotly is not installed. pbuilder-satisfydepends-dummy depends on r-cran-png; however: Package r-cran-png is not installed. pbuilder-satisfydepends-dummy depends on r-cran-rann; however: Package r-cran-rann is not installed. pbuilder-satisfydepends-dummy depends on r-cran-rcolorbrewer; however: Package r-cran-rcolorbrewer is not installed. pbuilder-satisfydepends-dummy depends on r-cran-rcpp; however: Package r-cran-rcpp is not installed. pbuilder-satisfydepends-dummy depends on r-cran-rcppannoy; however: Package r-cran-rcppannoy is not installed. pbuilder-satisfydepends-dummy depends on r-cran-reticulate; however: Package r-cran-reticulate is not installed. pbuilder-satisfydepends-dummy depends on r-cran-rlang; however: Package r-cran-rlang is not installed. pbuilder-satisfydepends-dummy depends on r-cran-rocr; however: Package r-cran-rocr is not installed. pbuilder-satisfydepends-dummy depends on r-cran-rsvd; however: Package r-cran-rsvd is not installed. pbuilder-satisfydepends-dummy depends on r-cran-rtsne; however: Package r-cran-rtsne is not installed. pbuilder-satisfydepends-dummy depends on r-cran-scales; however: Package r-cran-scales is not installed. pbuilder-satisfydepends-dummy depends on r-cran-sctransform; however: Package r-cran-sctransform is not installed. pbuilder-satisfydepends-dummy depends on r-cran-shiny; however: Package r-cran-shiny is not installed. pbuilder-satisfydepends-dummy depends on r-cran-spatstat; however: Package r-cran-spatstat is not installed. pbuilder-satisfydepends-dummy depends on r-cran-tibble; however: Package r-cran-tibble is not installed. pbuilder-satisfydepends-dummy depends on r-cran-uwot; however: Package r-cran-uwot is not installed. pbuilder-satisfydepends-dummy depends on r-cran-rcppeigen; however: Package r-cran-rcppeigen is not installed. pbuilder-satisfydepends-dummy depends on r-cran-rcppprogress; however: Package r-cran-rcppprogress is not installed. pbuilder-satisfydepends-dummy depends on r-cran-scattermore; however: Package r-cran-scattermore is not installed. pbuilder-satisfydepends-dummy depends on r-cran-seuratobject; however: Package r-cran-seuratobject is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} ca-certificates{a} dctrl-tools{a} debhelper{a} dh-autoreconf{a} dh-r{a} dh-strip-nondeterminism{a} dwz{a} file{a} fontconfig{a} fontconfig-config{a} fonts-dejavu-core{a} fonts-font-awesome{a} fonts-glyphicons-halflings{a} gettext{a} gettext-base{a} gfortran{a} gfortran-10{a} groff-base{a} icu-devtools{a} intltool-debian{a} libalgorithm-c3-perl{a} libarchive-zip-perl{a} libb-hooks-endofscope-perl{a} libb-hooks-op-check-perl{a} libblas-dev{a} libblas3{a} libboost-dev{a} libboost1.74-dev{a} libbrotli1{a} libbsd0{a} libbz2-dev{a} libcairo2{a} libclass-c3-perl{a} libclass-load-perl{a} libclass-load-xs-perl{a} libcurl3-gnutls{a} libcurl4{a} libdata-optlist-perl{a} libdatrie1{a} libdebhelper-perl{a} libdeflate0{a} libdevel-callchecker-perl{a} libdevel-globaldestruction-perl{a} libdevel-overloadinfo-perl{a} libdevel-stacktrace-perl{a} libdist-checkconflicts-perl{a} libdynaloader-functions-perl{a} libelf1{a} libencode-locale-perl{a} libeval-closure-perl{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libfile-which-perl{a} libfontconfig1{a} libfreetype6{a} libfribidi0{a} libgfortran-10-dev{a} libgfortran5{a} libglib2.0-0{a} libgraphite2-3{a} libharfbuzz0b{a} libhttp-date-perl{a} libhttp-message-perl{a} libice6{a} libicu-dev{a} libicu67{a} libio-html-perl{a} libjbig0{a} libjpeg-dev{a} libjpeg62-turbo{a} libjpeg62-turbo-dev{a} libjs-bootstrap{a} libjs-d3{a} libjs-es5-shim{a} libjs-highlight.js{a} libjs-jquery{a} libjs-jquery-datatables{a} libjs-jquery-selectize.js{a} libjs-jquery-ui{a} libjs-json{a} libjs-microplugin.js{a} libjs-sifter.js{a} libjs-twitter-bootstrap-datepicker{a} liblapack-dev{a} liblapack3{a} libldap-2.4-2{a} liblwp-mediatypes-perl{a} liblzma-dev{a} libmagic-mgc{a} libmagic1{a} libmd0{a} libmodule-implementation-perl{a} libmodule-runtime-conflicts-perl{a} libmodule-runtime-perl{a} libmoose-perl{a} libmpdec3{a} libmro-compat-perl{a} libnamespace-clean-perl{a} libncurses-dev{a} libncurses5-dev{a} libncurses6{a} libnghttp2-14{a} libpackage-deprecationmanager-perl{a} libpackage-stash-perl{a} libpackage-stash-xs-perl{a} libpango-1.0-0{a} libpangocairo-1.0-0{a} libpangoft2-1.0-0{a} libpaper-utils{a} libpaper1{a} libparams-classify-perl{a} libparams-util-perl{a} libpcre16-3{a} libpcre2-16-0{a} libpcre2-32-0{a} libpcre2-dev{a} libpcre2-posix2{a} libpcre3-dev{a} libpcre32-3{a} libpcrecpp0v5{a} libpipeline1{a} libpixman-1-0{a} libpng-dev{a} libpng16-16{a} libpsl5{a} libpython3-stdlib{a} libpython3.9-minimal{a} libpython3.9-stdlib{a} libreadline-dev{a} libreadline8{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libsigsegv2{a} libsm6{a} libssh2-1{a} libsub-exporter-perl{a} libsub-exporter-progressive-perl{a} libsub-identify-perl{a} libsub-install-perl{a} libsub-name-perl{a} libsub-override-perl{a} libswitch-perl{a} libtcl8.6{a} libthai-data{a} libthai0{a} libtiff5{a} libtimedate-perl{a} libtk8.6{a} libtool{a} libtry-tiny-perl{a} libuchardet0{a} liburi-perl{a} libuv1{a} libvariable-magic-perl{a} libwebp6{a} libwww-curl-perl{a} libwww-curl-simple-perl{a} libx11-6{a} libx11-data{a} libxau6{a} libxcb-render0{a} libxcb-shm0{a} libxcb1{a} libxdmcp6{a} libxext6{a} libxft2{a} libxml2{a} libxmuu1{a} libxrender1{a} libxss1{a} libxt6{a} littler{a} m4{a} man-db{a} media-types{a} node-html5shiv{a} node-normalize.css{a} openssl{a} pkg-config{a} po-debconf{a} python3{a} python3-minimal{a} python3.9{a} python3.9-minimal{a} r-base-core{a} r-base-dev{a} r-cran-abind{a} r-cran-askpass{a} r-cran-assertthat{a} r-cran-base64enc{a} r-cran-bh{a} r-cran-bitops{a} r-cran-brio{a} r-cran-callr{a} r-cran-catools{a} r-cran-cli{a} r-cran-cluster{a} r-cran-codetools{a} r-cran-colorspace{a} r-cran-colourpicker{a} r-cran-commonmark{a} r-cran-cowplot{a} r-cran-cpp11{a} r-cran-crayon{a} r-cran-crosstalk{a} r-cran-curl{a} r-cran-data.table{a} r-cran-deldir{a} r-cran-desc{a} r-cran-diffobj{a} r-cran-digest{a} r-cran-dplyr{a} r-cran-dqrng{a} r-cran-ellipsis{a} r-cran-evaluate{a} r-cran-fansi{a} r-cran-farver{a} r-cran-fastmap{a} r-cran-fitdistrplus{a} r-cran-fnn{a} r-cran-future{a} r-cran-future.apply{a} r-cran-gdata{a} r-cran-generics{a} r-cran-ggplot2{a} r-cran-ggrepel{a} r-cran-ggridges{a} r-cran-globals{a} r-cran-glue{a} r-cran-goftest{a} r-cran-gplots{a} r-cran-gridextra{a} r-cran-gtable{a} r-cran-gtools{a} r-cran-htmltools{a} r-cran-htmlwidgets{a} r-cran-httpuv{a} r-cran-httr{a} r-cran-ica{a} r-cran-igraph{a} r-cran-irlba{a} r-cran-isoband{a} r-cran-jsonlite{a} r-cran-kernsmooth{a} r-cran-labeling{a} r-cran-later{a} r-cran-lattice{a} r-cran-lazyeval{a} r-cran-leiden{a} r-cran-lifecycle{a} r-cran-listenv{a} r-cran-littler{a} r-cran-lmtest{a} r-cran-magrittr{a} r-cran-mass{a} r-cran-matrix{a} r-cran-matrixstats{a} r-cran-mgcv{a} r-cran-mime{a} r-cran-miniui{a} r-cran-munsell{a} r-cran-nlme{a} r-cran-openssl{a} r-cran-parallelly{a} r-cran-patchwork{a} r-cran-pbapply{a} r-cran-pillar{a} r-cran-pkgbuild{a} r-cran-pkgconfig{a} r-cran-pkgkitten{a} r-cran-pkgload{a} r-cran-plotly{a} r-cran-plyr{a} r-cran-png{a} r-cran-polyclip{a} r-cran-praise{a} r-cran-prettyunits{a} r-cran-processx{a} r-cran-promises{a} r-cran-ps{a} r-cran-purrr{a} r-cran-r6{a} r-cran-rann{a} r-cran-rappdirs{a} r-cran-rcolorbrewer{a} r-cran-rcpp{a} r-cran-rcppannoy{a} r-cran-rcpparmadillo{a} r-cran-rcppeigen{a} r-cran-rcppprogress{a} r-cran-rematch2{a} r-cran-reshape2{a} r-cran-reticulate{a} r-cran-rlang{a} r-cran-rocr{a} r-cran-rpart{a} r-cran-rprojroot{a} r-cran-rspectra{a} r-cran-rstudioapi{a} r-cran-rsvd{a} r-cran-rtsne{a} r-cran-scales{a} r-cran-scattermore{a} r-cran-sctransform{a} r-cran-seuratobject{a} r-cran-shiny{a} r-cran-shinyjs{a} r-cran-sitmo{a} r-cran-sourcetools{a} r-cran-spatstat{a} r-cran-spatstat.data{a} r-cran-spatstat.utils{a} r-cran-stringi{a} r-cran-stringr{a} r-cran-survival{a} r-cran-sys{a} r-cran-tensor{a} r-cran-testthat{a} r-cran-tibble{a} r-cran-tidyr{a} r-cran-tidyselect{a} r-cran-utf8{a} r-cran-uwot{a} r-cran-vctrs{a} r-cran-viridislite{a} r-cran-waldo{a} r-cran-withr{a} r-cran-xtable{a} r-cran-yaml{a} r-cran-zoo{a} readline-common{a} sensible-utils{a} ucf{a} unzip{a} x11-common{a} xauth{a} xdg-utils{a} zip{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: bzip2-doc cme curl devscripts git-buildpackage javascript-common libarchive-cpio-perl libclass-c3-xs-perl libclone-perl libdevel-lexalias-perl libdevel-partialdump-perl libfile-mimeinfo-perl libglib2.0-data libgpm2 libldap-common libltdl-dev libmail-sendmail-perl libnet-dbus-perl libpcg-cpp-dev libpng-tools libsasl2-modules libx11-protocol-perl lynx publicsuffix r-cran-bit64 r-cran-cliapp r-cran-dbi r-cran-dbplyr r-cran-decor r-cran-domc r-cran-dygraphs r-cran-ggthemes r-cran-gridgraphics r-cran-gsl r-cran-hexbin r-cran-hms r-cran-knitr r-cran-lubridate r-cran-mapproj r-cran-maps r-cran-maptools r-cran-markdown r-cran-mockery r-cran-mockr r-cran-quantreg r-cran-randomfields r-cran-rgenoud r-cran-rmarkdown r-cran-rsclient r-cran-rsqlite r-cran-runit r-cran-sf r-cran-sodium r-cran-sp r-cran-vdiffr r-cran-webutils r-cran-xml2 r-doc-html r-recommended shared-mime-info wget x11-utils x11-xserver-utils xdg-user-dirs 0 packages upgraded, 345 newly installed, 0 to remove and 0 not upgraded. Need to get 225 MB of archives. After unpacking 667 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian bullseye/main amd64 bsdextrautils amd64 2.36.1-8+deb11u2 [146 kB] Get: 2 http://deb.debian.org/debian bullseye/main amd64 libuchardet0 amd64 0.0.7-1 [67.8 kB] Get: 3 http://deb.debian.org/debian bullseye/main amd64 groff-base amd64 1.22.4-6 [936 kB] Get: 4 http://deb.debian.org/debian bullseye/main amd64 libpipeline1 amd64 1.5.3-1 [34.3 kB] Get: 5 http://deb.debian.org/debian bullseye/main amd64 man-db amd64 2.9.4-2 [1354 kB] Get: 6 http://deb.debian.org/debian bullseye/main amd64 node-normalize.css all 8.0.1-3 [12.5 kB] Get: 7 http://deb.debian.org/debian bullseye/main amd64 libpython3.9-minimal amd64 3.9.2-1 [801 kB] Get: 8 http://deb.debian.org/debian bullseye/main amd64 libexpat1 amd64 2.2.10-2+deb11u5 [98.2 kB] Get: 9 http://deb.debian.org/debian bullseye/main amd64 python3.9-minimal amd64 3.9.2-1 [1955 kB] Get: 10 http://deb.debian.org/debian bullseye/main amd64 python3-minimal amd64 3.9.2-3 [38.2 kB] Get: 11 http://deb.debian.org/debian bullseye/main amd64 media-types all 4.0.0 [30.3 kB] Get: 12 http://deb.debian.org/debian bullseye/main amd64 libmpdec3 amd64 2.5.1-1 [87.7 kB] Get: 13 http://deb.debian.org/debian bullseye/main amd64 readline-common all 8.1-1 [73.7 kB] Get: 14 http://deb.debian.org/debian bullseye/main amd64 libreadline8 amd64 8.1-1 [169 kB] Get: 15 http://deb.debian.org/debian bullseye/main amd64 libpython3.9-stdlib amd64 3.9.2-1 [1684 kB] Get: 16 http://deb.debian.org/debian bullseye/main amd64 python3.9 amd64 3.9.2-1 [466 kB] Get: 17 http://deb.debian.org/debian bullseye/main amd64 libpython3-stdlib amd64 3.9.2-3 [21.4 kB] Get: 18 http://deb.debian.org/debian bullseye/main amd64 python3 amd64 3.9.2-3 [37.9 kB] Get: 19 http://deb.debian.org/debian bullseye/main amd64 sensible-utils all 0.0.14 [14.8 kB] Get: 20 http://deb.debian.org/debian bullseye/main amd64 openssl amd64 1.1.1w-0+deb11u1 [859 kB] Get: 21 http://deb.debian.org/debian bullseye/main amd64 ca-certificates all 20210119 [158 kB] Get: 22 http://deb.debian.org/debian bullseye/main amd64 libmagic-mgc amd64 1:5.39-3+deb11u1 [273 kB] Get: 23 http://deb.debian.org/debian bullseye/main amd64 libmagic1 amd64 1:5.39-3+deb11u1 [128 kB] Get: 24 http://deb.debian.org/debian bullseye/main amd64 file amd64 1:5.39-3+deb11u1 [69.2 kB] Get: 25 http://deb.debian.org/debian bullseye/main amd64 gettext-base amd64 0.21-4 [175 kB] Get: 26 http://deb.debian.org/debian bullseye/main amd64 ucf all 3.0043 [74.0 kB] Get: 27 http://deb.debian.org/debian bullseye/main amd64 libsigsegv2 amd64 2.13-1 [34.8 kB] Get: 28 http://deb.debian.org/debian bullseye/main amd64 m4 amd64 1.4.18-5 [204 kB] Get: 29 http://deb.debian.org/debian bullseye/main amd64 autoconf all 2.69-14 [313 kB] Get: 30 http://deb.debian.org/debian bullseye/main amd64 autotools-dev all 20180224.1+nmu1 [77.1 kB] Get: 31 http://deb.debian.org/debian bullseye/main amd64 automake all 1:1.16.3-2 [814 kB] Get: 32 http://deb.debian.org/debian bullseye/main amd64 autopoint all 0.21-4 [510 kB] Get: 33 http://deb.debian.org/debian bullseye/main amd64 dctrl-tools amd64 2.24-3+b1 [104 kB] Get: 34 http://deb.debian.org/debian bullseye/main amd64 libdebhelper-perl all 13.3.4 [189 kB] Get: 35 http://deb.debian.org/debian bullseye/main amd64 libtool all 2.4.6-15 [513 kB] Get: 36 http://deb.debian.org/debian bullseye/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 37 http://deb.debian.org/debian bullseye/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 38 http://deb.debian.org/debian bullseye/main amd64 libsub-override-perl all 0.09-2 [10.2 kB] Get: 39 http://deb.debian.org/debian bullseye/main amd64 libfile-stripnondeterminism-perl all 1.12.0-1 [26.3 kB] Get: 40 http://deb.debian.org/debian bullseye/main amd64 dh-strip-nondeterminism all 1.12.0-1 [15.4 kB] Get: 41 http://deb.debian.org/debian bullseye/main amd64 libelf1 amd64 0.183-1 [165 kB] Get: 42 http://deb.debian.org/debian bullseye/main amd64 dwz amd64 0.13+20210201-1 [175 kB] Get: 43 http://deb.debian.org/debian bullseye/main amd64 libicu67 amd64 67.1-7 [8622 kB] Get: 44 http://deb.debian.org/debian bullseye/main amd64 libxml2 amd64 2.9.10+dfsg-6.7+deb11u4 [693 kB] Get: 45 http://deb.debian.org/debian bullseye/main amd64 gettext amd64 0.21-4 [1311 kB] Get: 46 http://deb.debian.org/debian bullseye/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get: 47 http://deb.debian.org/debian bullseye/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 48 http://deb.debian.org/debian bullseye/main amd64 debhelper all 13.3.4 [1049 kB] Get: 49 http://deb.debian.org/debian bullseye/main amd64 zip amd64 3.0-12 [232 kB] Get: 50 http://deb.debian.org/debian bullseye/main amd64 unzip amd64 6.0-26+deb11u1 [172 kB] Get: 51 http://deb.debian.org/debian bullseye/main amd64 libpaper1 amd64 1.1.28+b1 [21.6 kB] Get: 52 http://deb.debian.org/debian bullseye/main amd64 libpaper-utils amd64 1.1.28+b1 [18.3 kB] Get: 53 http://deb.debian.org/debian bullseye/main amd64 xdg-utils all 1.1.3-4.1 [75.5 kB] Get: 54 http://deb.debian.org/debian bullseye/main amd64 libblas3 amd64 3.9.0-3+deb11u1 [153 kB] Get: 55 http://deb.debian.org/debian bullseye/main amd64 libbrotli1 amd64 1.0.9-2+b2 [279 kB] Get: 56 http://deb.debian.org/debian bullseye/main amd64 libpng16-16 amd64 1.6.37-3 [294 kB] Get: 57 http://deb.debian.org/debian bullseye/main amd64 libfreetype6 amd64 2.10.4+dfsg-1+deb11u1 [418 kB] Get: 58 http://deb.debian.org/debian bullseye/main amd64 fonts-dejavu-core all 2.37-2 [1069 kB] Get: 59 http://deb.debian.org/debian bullseye/main amd64 fontconfig-config all 2.13.1-4.2 [281 kB] Get: 60 http://deb.debian.org/debian bullseye/main amd64 libfontconfig1 amd64 2.13.1-4.2 [347 kB] Get: 61 http://deb.debian.org/debian bullseye/main amd64 libpixman-1-0 amd64 0.40.0-1.1~deb11u1 [543 kB] Get: 62 http://deb.debian.org/debian bullseye/main amd64 libxau6 amd64 1:1.0.9-1 [19.7 kB] Get: 63 http://deb.debian.org/debian bullseye/main amd64 libmd0 amd64 1.0.3-3 [28.0 kB] Get: 64 http://deb.debian.org/debian bullseye/main amd64 libbsd0 amd64 0.11.3-1+deb11u1 [108 kB] Get: 65 http://deb.debian.org/debian bullseye/main amd64 libxdmcp6 amd64 1:1.1.2-3 [26.3 kB] Get: 66 http://deb.debian.org/debian bullseye/main amd64 libxcb1 amd64 1.14-3 [140 kB] Get: 67 http://deb.debian.org/debian bullseye/main amd64 libx11-data all 2:1.7.2-1+deb11u2 [311 kB] Get: 68 http://deb.debian.org/debian bullseye/main amd64 libx11-6 amd64 2:1.7.2-1+deb11u2 [772 kB] Get: 69 http://deb.debian.org/debian bullseye/main amd64 libxcb-render0 amd64 1.14-3 [111 kB] Get: 70 http://deb.debian.org/debian bullseye/main amd64 libxcb-shm0 amd64 1.14-3 [101 kB] Get: 71 http://deb.debian.org/debian bullseye/main amd64 libxext6 amd64 2:1.3.3-1.1 [52.7 kB] Get: 72 http://deb.debian.org/debian bullseye/main amd64 libxrender1 amd64 1:0.9.10-1 [33.0 kB] Get: 73 http://deb.debian.org/debian bullseye/main amd64 libcairo2 amd64 1.16.0-5 [694 kB] Get: 74 http://deb.debian.org/debian bullseye/main amd64 libsasl2-modules-db amd64 2.1.27+dfsg-2.1+deb11u1 [69.1 kB] Get: 75 http://deb.debian.org/debian bullseye/main amd64 libsasl2-2 amd64 2.1.27+dfsg-2.1+deb11u1 [106 kB] Get: 76 http://deb.debian.org/debian bullseye/main amd64 libldap-2.4-2 amd64 2.4.57+dfsg-3+deb11u1 [232 kB] Get: 77 http://deb.debian.org/debian bullseye/main amd64 libnghttp2-14 amd64 1.43.0-1+deb11u1 [77.2 kB] Get: 78 http://deb.debian.org/debian bullseye/main amd64 libpsl5 amd64 0.21.0-1.2 [57.3 kB] Get: 79 http://deb.debian.org/debian bullseye/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2+b2 [60.8 kB] Get: 80 http://deb.debian.org/debian bullseye/main amd64 libssh2-1 amd64 1.9.0-2+deb11u1 [156 kB] Get: 81 http://deb.debian.org/debian bullseye/main amd64 libcurl4 amd64 7.74.0-1.3+deb11u12 [347 kB] Get: 82 http://deb.debian.org/debian bullseye/main amd64 libglib2.0-0 amd64 2.66.8-1+deb11u4 [1377 kB] Get: 83 http://deb.debian.org/debian bullseye/main amd64 libjpeg62-turbo amd64 1:2.0.6-4 [151 kB] Get: 84 http://deb.debian.org/debian bullseye/main amd64 libgfortran5 amd64 10.2.1-6 [727 kB] Get: 85 http://deb.debian.org/debian bullseye/main amd64 liblapack3 amd64 3.9.0-3+deb11u1 [2166 kB] Get: 86 http://deb.debian.org/debian bullseye/main amd64 fontconfig amd64 2.13.1-4.2 [417 kB] Get: 87 http://deb.debian.org/debian bullseye/main amd64 libfribidi0 amd64 1.0.8-2+deb11u1 [64.9 kB] Get: 88 http://deb.debian.org/debian bullseye/main amd64 libgraphite2-3 amd64 1.3.14-1 [81.2 kB] Get: 89 http://deb.debian.org/debian bullseye/main amd64 libharfbuzz0b amd64 2.7.4-1 [1471 kB] Get: 90 http://deb.debian.org/debian bullseye/main amd64 libthai-data all 0.1.28-3 [170 kB] Get: 91 http://deb.debian.org/debian bullseye/main amd64 libdatrie1 amd64 0.2.13-1 [42.7 kB] Get: 92 http://deb.debian.org/debian bullseye/main amd64 libthai0 amd64 0.1.28-3 [54.2 kB] Get: 93 http://deb.debian.org/debian bullseye/main amd64 libpango-1.0-0 amd64 1.46.2-3 [191 kB] Get: 94 http://deb.debian.org/debian bullseye/main amd64 libpangoft2-1.0-0 amd64 1.46.2-3 [62.2 kB] Get: 95 http://deb.debian.org/debian bullseye/main amd64 libpangocairo-1.0-0 amd64 1.46.2-3 [50.6 kB] Get: 96 http://deb.debian.org/debian bullseye/main amd64 libtcl8.6 amd64 8.6.11+dfsg-1 [1018 kB] Get: 97 http://deb.debian.org/debian bullseye/main amd64 libdeflate0 amd64 1.7-1 [53.1 kB] Get: 98 http://deb.debian.org/debian bullseye/main amd64 libjbig0 amd64 2.1-3.1+b2 [31.0 kB] Get: 99 http://deb.debian.org/debian bullseye/main amd64 libwebp6 amd64 0.6.1-2.1+deb11u2 [259 kB] Get: 100 http://deb.debian.org/debian bullseye/main amd64 libtiff5 amd64 4.2.0-1+deb11u5 [290 kB] Get: 101 http://deb.debian.org/debian bullseye/main amd64 libxft2 amd64 2.3.2-2 [57.2 kB] Get: 102 http://deb.debian.org/debian bullseye/main amd64 x11-common all 1:7.7+22 [252 kB] Get: 103 http://deb.debian.org/debian bullseye/main amd64 libxss1 amd64 1:1.2.3-1 [17.8 kB] Get: 104 http://deb.debian.org/debian bullseye/main amd64 libtk8.6 amd64 8.6.11-2 [780 kB] Get: 105 http://deb.debian.org/debian bullseye/main amd64 libice6 amd64 2:1.0.10-1 [58.5 kB] Get: 106 http://deb.debian.org/debian bullseye/main amd64 libsm6 amd64 2:1.2.3-1 [35.1 kB] Get: 107 http://deb.debian.org/debian bullseye/main amd64 libxt6 amd64 1:1.2.0-1 [189 kB] Get: 108 http://deb.debian.org/debian bullseye/main amd64 r-base-core amd64 4.0.4-1 [25.1 MB] Get: 109 http://deb.debian.org/debian bullseye/main amd64 libgfortran-10-dev amd64 10.2.1-6 [769 kB] Get: 110 http://deb.debian.org/debian bullseye/main amd64 gfortran-10 amd64 10.2.1-6 [9447 kB] Get: 111 http://deb.debian.org/debian bullseye/main amd64 gfortran amd64 4:10.2.1-1 [1428 B] Get: 112 http://deb.debian.org/debian bullseye/main amd64 libblas-dev amd64 3.9.0-3+deb11u1 [161 kB] Get: 113 http://deb.debian.org/debian bullseye/main amd64 liblapack-dev amd64 3.9.0-3+deb11u1 [4246 kB] Get: 114 http://deb.debian.org/debian bullseye/main amd64 libncurses6 amd64 6.2+20201114-2+deb11u2 [102 kB] Get: 115 http://deb.debian.org/debian bullseye/main amd64 libncurses-dev amd64 6.2+20201114-2+deb11u2 [344 kB] Get: 116 http://deb.debian.org/debian bullseye/main amd64 libncurses5-dev amd64 6.2+20201114-2+deb11u2 [948 B] Get: 117 http://deb.debian.org/debian bullseye/main amd64 libreadline-dev amd64 8.1-1 [148 kB] Get: 118 http://deb.debian.org/debian bullseye/main amd64 libjpeg62-turbo-dev amd64 1:2.0.6-4 [278 kB] Get: 119 http://deb.debian.org/debian bullseye/main amd64 libjpeg-dev amd64 1:2.0.6-4 [67.8 kB] Get: 120 http://deb.debian.org/debian bullseye/main amd64 libpcre2-16-0 amd64 10.36-2+deb11u1 [232 kB] Get: 121 http://deb.debian.org/debian bullseye/main amd64 libpcre2-32-0 amd64 10.36-2+deb11u1 [220 kB] Get: 122 http://deb.debian.org/debian bullseye/main amd64 libpcre2-posix2 amd64 10.36-2+deb11u1 [49.1 kB] Get: 123 http://deb.debian.org/debian bullseye/main amd64 libpcre2-dev amd64 10.36-2+deb11u1 [733 kB] Get: 124 http://deb.debian.org/debian bullseye/main amd64 libpcre16-3 amd64 2:8.39-13 [259 kB] Get: 125 http://deb.debian.org/debian bullseye/main amd64 libpcre32-3 amd64 2:8.39-13 [250 kB] Get: 126 http://deb.debian.org/debian bullseye/main amd64 libpcrecpp0v5 amd64 2:8.39-13 [152 kB] Get: 127 http://deb.debian.org/debian bullseye/main amd64 libpcre3-dev amd64 2:8.39-13 [650 kB] Get: 128 http://deb.debian.org/debian bullseye/main amd64 zlib1g-dev amd64 1:1.2.11.dfsg-2+deb11u2 [191 kB] Get: 129 http://deb.debian.org/debian bullseye/main amd64 libpng-dev amd64 1.6.37-3 [298 kB] Get: 130 http://deb.debian.org/debian bullseye/main amd64 libbz2-dev amd64 1.0.8-4 [30.1 kB] Get: 131 http://deb.debian.org/debian bullseye/main amd64 liblzma-dev amd64 5.2.5-2.1~deb11u1 [229 kB] Get: 132 http://deb.debian.org/debian bullseye/main amd64 icu-devtools amd64 67.1-7 [201 kB] Get: 133 http://deb.debian.org/debian bullseye/main amd64 libicu-dev amd64 67.1-7 [9597 kB] Get: 134 http://deb.debian.org/debian bullseye/main amd64 libxmuu1 amd64 2:1.1.2-2+b3 [23.9 kB] Get: 135 http://deb.debian.org/debian bullseye/main amd64 xauth amd64 1:1.1-1 [40.5 kB] Get: 136 http://deb.debian.org/debian bullseye/main amd64 pkg-config amd64 0.29.2-1 [65.1 kB] Get: 137 http://deb.debian.org/debian bullseye/main amd64 r-base-dev all 4.0.4-1 [4484 B] Get: 138 http://deb.debian.org/debian bullseye/main amd64 libfile-which-perl all 1.23-1 [16.6 kB] Get: 139 http://deb.debian.org/debian bullseye/main amd64 libswitch-perl all 2.17-2.1 [20.0 kB] Get: 140 http://deb.debian.org/debian bullseye/main amd64 libencode-locale-perl all 1.05-1.1 [13.2 kB] Get: 141 http://deb.debian.org/debian bullseye/main amd64 libtimedate-perl all 2.3300-2 [39.3 kB] Get: 142 http://deb.debian.org/debian bullseye/main amd64 libhttp-date-perl all 6.05-1 [10.4 kB] Get: 143 http://deb.debian.org/debian bullseye/main amd64 libio-html-perl all 1.004-2 [16.1 kB] Get: 144 http://deb.debian.org/debian bullseye/main amd64 liblwp-mediatypes-perl all 6.04-1 [19.9 kB] Get: 145 http://deb.debian.org/debian bullseye/main amd64 liburi-perl all 5.08-1 [90.6 kB] Get: 146 http://deb.debian.org/debian bullseye/main amd64 libhttp-message-perl all 6.28-1 [79.6 kB] Get: 147 http://deb.debian.org/debian bullseye/main amd64 libparams-util-perl amd64 1.102-1+b1 [25.6 kB] Get: 148 http://deb.debian.org/debian bullseye/main amd64 libsub-install-perl all 0.928-1.1 [10.8 kB] Get: 149 http://deb.debian.org/debian bullseye/main amd64 libdata-optlist-perl all 0.110-1.1 [10.8 kB] Get: 150 http://deb.debian.org/debian bullseye/main amd64 libb-hooks-op-check-perl amd64 0.22-1+b3 [11.3 kB] Get: 151 http://deb.debian.org/debian bullseye/main amd64 libdynaloader-functions-perl all 0.003-1.1 [12.7 kB] Get: 152 http://deb.debian.org/debian bullseye/main amd64 libdevel-callchecker-perl amd64 0.008-1+b2 [15.9 kB] Get: 153 http://deb.debian.org/debian bullseye/main amd64 libparams-classify-perl amd64 0.015-1+b3 [25.7 kB] Get: 154 http://deb.debian.org/debian bullseye/main amd64 libmodule-runtime-perl all 0.016-1 [19.4 kB] Get: 155 http://deb.debian.org/debian bullseye/main amd64 libtry-tiny-perl all 0.30-1 [23.3 kB] Get: 156 http://deb.debian.org/debian bullseye/main amd64 libmodule-implementation-perl all 0.09-1.1 [12.4 kB] Get: 157 http://deb.debian.org/debian bullseye/main amd64 libpackage-stash-perl all 0.39-1 [21.9 kB] Get: 158 http://deb.debian.org/debian bullseye/main amd64 libclass-load-perl all 0.25-1 [16.1 kB] Get: 159 http://deb.debian.org/debian bullseye/main amd64 libclass-load-xs-perl amd64 0.10-1+b5 [14.6 kB] Get: 160 http://deb.debian.org/debian bullseye/main amd64 libsub-exporter-progressive-perl all 0.001013-1 [7588 B] Get: 161 http://deb.debian.org/debian bullseye/main amd64 libdevel-globaldestruction-perl all 0.14-1.1 [8312 B] Get: 162 http://deb.debian.org/debian bullseye/main amd64 libalgorithm-c3-perl all 0.11-1 [11.7 kB] Get: 163 http://deb.debian.org/debian bullseye/main amd64 libclass-c3-perl all 0.35-1 [22.9 kB] Get: 164 http://deb.debian.org/debian bullseye/main amd64 libmro-compat-perl all 0.13-1 [12.2 kB] Get: 165 http://deb.debian.org/debian bullseye/main amd64 libsub-identify-perl amd64 0.14-1+b3 [12.0 kB] Get: 166 http://deb.debian.org/debian bullseye/main amd64 libdevel-overloadinfo-perl all 0.005-1 [7212 B] Get: 167 http://deb.debian.org/debian bullseye/main amd64 libdevel-stacktrace-perl all 2.0400-1 [28.6 kB] Get: 168 http://deb.debian.org/debian bullseye/main amd64 libsub-exporter-perl all 0.987-1 [47.2 kB] Get: 169 http://deb.debian.org/debian bullseye/main amd64 libeval-closure-perl all 0.14-1 [11.5 kB] Get: 170 http://deb.debian.org/debian bullseye/main amd64 libdist-checkconflicts-perl all 0.11-1.1 [10.2 kB] Get: 171 http://deb.debian.org/debian bullseye/main amd64 libmodule-runtime-conflicts-perl all 0.003-1.1 [7156 B] Get: 172 http://deb.debian.org/debian bullseye/main amd64 libsub-name-perl amd64 0.26-1+b1 [13.8 kB] Get: 173 http://deb.debian.org/debian bullseye/main amd64 libpackage-deprecationmanager-perl all 0.17-1.1 [16.6 kB] Get: 174 http://deb.debian.org/debian bullseye/main amd64 libpackage-stash-xs-perl amd64 0.29-1+b2 [20.2 kB] Get: 175 http://deb.debian.org/debian bullseye/main amd64 libmoose-perl amd64 2.2014-2 [802 kB] Get: 176 http://deb.debian.org/debian bullseye/main amd64 libvariable-magic-perl amd64 0.62-1+b3 [45.7 kB] Get: 177 http://deb.debian.org/debian bullseye/main amd64 libb-hooks-endofscope-perl all 0.24-1.1 [18.9 kB] Get: 178 http://deb.debian.org/debian bullseye/main amd64 libnamespace-clean-perl all 0.27-1 [17.3 kB] Get: 179 http://deb.debian.org/debian bullseye/main amd64 libcurl3-gnutls amd64 7.74.0-1.3+deb11u12 [344 kB] Get: 180 http://deb.debian.org/debian bullseye/main amd64 libwww-curl-perl amd64 4.17-7+b1 [60.6 kB] Get: 181 http://deb.debian.org/debian bullseye/main amd64 libwww-curl-simple-perl all 0.100191-2 [12.5 kB] Get: 182 http://deb.debian.org/debian bullseye/main amd64 dh-r all 20210303 [41.8 kB] Get: 183 http://deb.debian.org/debian bullseye/main amd64 fonts-font-awesome all 5.0.10+really4.7.0~dfsg-4.1 [517 kB] Get: 184 http://deb.debian.org/debian bullseye/main amd64 fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-2 [164 kB] Get: 185 http://deb.debian.org/debian bullseye/main amd64 libboost1.74-dev amd64 1.74.0-9 [9534 kB] Get: 186 http://deb.debian.org/debian bullseye/main amd64 libboost-dev amd64 1.74.0.3 [4548 B] Get: 187 http://deb.debian.org/debian bullseye/main amd64 libjs-bootstrap all 3.4.1+dfsg-2 [173 kB] Get: 188 http://deb.debian.org/debian bullseye/main amd64 libjs-d3 all 3.5.17-4 [132 kB] Get: 189 http://deb.debian.org/debian bullseye/main amd64 libjs-es5-shim all 4.5.15-1 [43.6 kB] Get: 190 http://deb.debian.org/debian bullseye/main amd64 libjs-highlight.js all 9.18.5+dfsg1-1 [397 kB] Get: 191 http://deb.debian.org/debian bullseye/main amd64 libjs-jquery all 3.5.1+dfsg+~3.5.5-7 [315 kB] Get: 192 http://deb.debian.org/debian bullseye/main amd64 libjs-jquery-datatables all 1.10.21+dfsg-2+deb11u1 [138 kB] Get: 193 http://deb.debian.org/debian bullseye/main amd64 libjs-sifter.js all 0.6.0+dfsg-1 [12.1 kB] Get: 194 http://deb.debian.org/debian bullseye/main amd64 libjs-microplugin.js all 0.0.3+dfsg-1.1 [3672 B] Get: 195 http://deb.debian.org/debian bullseye/main amd64 libjs-jquery-selectize.js all 0.12.6+dfsg-1.1 [52.1 kB] Get: 196 http://deb.debian.org/debian bullseye/main amd64 libjs-jquery-ui all 1.12.1+dfsg-8+deb11u2 [232 kB] Get: 197 http://deb.debian.org/debian bullseye/main amd64 libjs-json all 0~20190826+~1.0.5-2 [20.5 kB] Get: 198 http://deb.debian.org/debian bullseye/main amd64 libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4.1 [32.1 kB] Get: 199 http://deb.debian.org/debian bullseye/main amd64 libuv1 amd64 1.40.0-2+deb11u1 [132 kB] Get: 200 http://deb.debian.org/debian bullseye/main amd64 r-cran-littler amd64 0.3.12-1 [95.9 kB] Get: 201 http://deb.debian.org/debian bullseye/main amd64 littler all 0.3.12-1 [15.6 kB] Get: 202 http://deb.debian.org/debian bullseye/main amd64 node-html5shiv all 3.7.3+dfsg-3 [12.9 kB] Get: 203 http://deb.debian.org/debian bullseye/main amd64 r-cran-abind all 1.4-5-2 [64.6 kB] Get: 204 http://deb.debian.org/debian bullseye/main amd64 r-cran-sys amd64 3.4-1 [42.9 kB] Get: 205 http://deb.debian.org/debian bullseye/main amd64 r-cran-askpass amd64 1.1-2 [22.2 kB] Get: 206 http://deb.debian.org/debian bullseye/main amd64 r-cran-assertthat all 0.2.1-2 [56.5 kB] Get: 207 http://deb.debian.org/debian bullseye/main amd64 r-cran-base64enc amd64 0.1-3-3 [27.9 kB] Get: 208 http://deb.debian.org/debian bullseye/main amd64 r-cran-bh all 1.74.0-1 [5196 B] Get: 209 http://deb.debian.org/debian bullseye/main amd64 r-cran-bitops amd64 1.0-6-5 [23.6 kB] Get: 210 http://deb.debian.org/debian bullseye/main amd64 r-cran-brio amd64 1.1.1-1 [31.7 kB] Get: 211 http://deb.debian.org/debian bullseye/main amd64 r-cran-ps amd64 1.5.0-1 [277 kB] Get: 212 http://deb.debian.org/debian bullseye/main amd64 r-cran-r6 all 2.5.0-1 [104 kB] Get: 213 http://deb.debian.org/debian bullseye/main amd64 r-cran-processx amd64 3.4.5-1 [295 kB] Get: 214 http://deb.debian.org/debian bullseye/main amd64 r-cran-callr all 3.5.1-1 [386 kB] Get: 215 http://deb.debian.org/debian bullseye/main amd64 r-cran-catools amd64 1.18.1-1 [204 kB] Get: 216 http://deb.debian.org/debian bullseye/main amd64 r-cran-glue amd64 1.4.2-1 [138 kB] Get: 217 http://deb.debian.org/debian bullseye/main amd64 r-cran-cli all 2.3.0-1 [480 kB] Get: 218 http://deb.debian.org/debian bullseye/main amd64 r-cran-cluster amd64 2.1.1-1 [553 kB] Get: 219 http://deb.debian.org/debian bullseye/main amd64 r-cran-codetools all 0.2-18-1 [91.8 kB] Get: 220 http://deb.debian.org/debian bullseye/main amd64 r-cran-colorspace amd64 2.0-0+dfsg-1 [1684 kB] Get: 221 http://deb.debian.org/debian bullseye/main amd64 r-cran-digest amd64 0.6.27-1 [192 kB] Get: 222 http://deb.debian.org/debian bullseye/main amd64 r-cran-gtable all 0.3.0+dfsg-2 [163 kB] Get: 223 http://deb.debian.org/debian bullseye/main amd64 r-cran-crayon all 1.4.0-1 [143 kB] Get: 224 http://deb.debian.org/debian bullseye/main amd64 r-cran-rprojroot all 2.0.2-1 [114 kB] Get: 225 http://deb.debian.org/debian bullseye/main amd64 r-cran-desc all 1.2.0-3 [301 kB] Get: 226 http://deb.debian.org/debian bullseye/main amd64 r-cran-rlang amd64 0.4.10-1 [1176 kB] Get: 227 http://deb.debian.org/debian bullseye/main amd64 r-cran-ellipsis amd64 0.3.1-1 [31.7 kB] Get: 228 http://deb.debian.org/debian bullseye/main amd64 r-cran-evaluate all 0.14-2 [81.1 kB] Get: 229 http://deb.debian.org/debian bullseye/main amd64 r-cran-jsonlite amd64 1.7.2+dfsg-1 [447 kB] Get: 230 http://deb.debian.org/debian bullseye/main amd64 r-cran-lifecycle all 0.2.0-2 [93.2 kB] Get: 231 http://deb.debian.org/debian bullseye/main amd64 r-cran-magrittr amd64 2.0.1-1 [198 kB] Get: 232 http://deb.debian.org/debian bullseye/main amd64 r-cran-prettyunits all 1.1.1-2 [39.1 kB] Get: 233 http://deb.debian.org/debian bullseye/main amd64 r-cran-withr all 2.4.1-1 [210 kB] Get: 234 http://deb.debian.org/debian bullseye/main amd64 r-cran-pkgbuild all 1.2.0-1 [146 kB] Get: 235 http://deb.debian.org/debian bullseye/main amd64 r-cran-rstudioapi all 0.13-1 [262 kB] Get: 236 http://deb.debian.org/debian bullseye/main amd64 r-cran-pkgload amd64 1.1.0-1 [168 kB] Get: 237 http://deb.debian.org/debian bullseye/main amd64 r-cran-praise all 1.0.0-4 [20.1 kB] Get: 238 http://deb.debian.org/debian bullseye/main amd64 r-cran-diffobj amd64 0.3.2-1 [1069 kB] Get: 239 http://deb.debian.org/debian bullseye/main amd64 r-cran-fansi amd64 0.4.2-1 [345 kB] Get: 240 http://deb.debian.org/debian bullseye/main amd64 r-cran-utf8 amd64 1.1.4-2 [131 kB] Get: 241 http://deb.debian.org/debian bullseye/main amd64 r-cran-vctrs amd64 0.3.6-1 [1107 kB] Get: 242 http://deb.debian.org/debian bullseye/main amd64 r-cran-pillar all 1.4.7-1 [227 kB] Get: 243 http://deb.debian.org/debian bullseye/main amd64 r-cran-pkgconfig all 2.0.3-2 [19.6 kB] Get: 244 http://deb.debian.org/debian bullseye/main amd64 r-cran-tibble amd64 3.0.6+dfsg-1 [416 kB] Get: 245 http://deb.debian.org/debian bullseye/main amd64 r-cran-rematch2 all 2.1.2-2 [46.3 kB] Get: 246 http://deb.debian.org/debian bullseye/main amd64 r-cran-waldo all 0.2.3-2 [79.3 kB] Get: 247 http://deb.debian.org/debian bullseye/main amd64 r-cran-testthat amd64 3.0.1-1 [1451 kB] Get: 248 http://deb.debian.org/debian bullseye/main amd64 r-cran-isoband amd64 0.2.3-2 [2085 kB] Get: 249 http://deb.debian.org/debian bullseye/main amd64 r-cran-mass amd64 7.3-53.1-1 [1115 kB] Get: 250 http://deb.debian.org/debian bullseye/main amd64 r-cran-lattice amd64 0.20-41-1+b1 [1164 kB] Get: 251 http://deb.debian.org/debian bullseye/main amd64 r-cran-nlme amd64 3.1.152-1 [2241 kB] Get: 252 http://deb.debian.org/debian bullseye/main amd64 r-cran-matrix amd64 1.3-2-1 [3604 kB] Get: 253 http://deb.debian.org/debian bullseye/main amd64 r-cran-mgcv amd64 1.8-34-1 [2998 kB] Get: 254 http://deb.debian.org/debian bullseye/main amd64 r-cran-farver amd64 2.0.3-1+b1 [1393 kB] Get: 255 http://deb.debian.org/debian bullseye/main amd64 r-cran-labeling all 0.4.2-1 [62.7 kB] Get: 256 http://deb.debian.org/debian bullseye/main amd64 r-cran-munsell all 0.5.0-2 [236 kB] Get: 257 http://deb.debian.org/debian bullseye/main amd64 r-cran-rcolorbrewer all 1.1-2-3 [54.4 kB] Get: 258 http://deb.debian.org/debian bullseye/main amd64 r-cran-viridislite all 0.3.0-4 [59.2 kB] Get: 259 http://deb.debian.org/debian bullseye/main amd64 r-cran-scales all 1.1.1-1 [557 kB] Get: 260 http://deb.debian.org/debian bullseye/main amd64 r-cran-ggplot2 all 3.3.3+dfsg-1 [3158 kB] Get: 261 http://deb.debian.org/debian bullseye/main amd64 r-cran-htmltools amd64 0.5.1.1-1 [241 kB] Get: 262 http://deb.debian.org/debian bullseye/main amd64 r-cran-yaml amd64 2.2.1-1+b1 [104 kB] Get: 263 http://deb.debian.org/debian bullseye/main amd64 r-cran-htmlwidgets all 1.5.3+dfsg-1 [124 kB] Get: 264 http://deb.debian.org/debian bullseye/main amd64 r-cran-pkgkitten all 0.2.1-1 [26.5 kB] Get: 265 http://deb.debian.org/debian bullseye/main amd64 r-cran-rcpp amd64 1.0.6-1 [2035 kB] Get: 266 http://deb.debian.org/debian bullseye/main amd64 r-cran-later amd64 1.1.0.1+dfsg-1 [119 kB] Get: 267 http://deb.debian.org/debian bullseye/main amd64 r-cran-promises amd64 1.1.1+dfsg-1 [172 kB] Get: 268 http://deb.debian.org/debian bullseye/main amd64 r-cran-httpuv amd64 1.5.5+dfsg-1 [491 kB] Get: 269 http://deb.debian.org/debian bullseye/main amd64 r-cran-mime amd64 0.9-1+b1 [35.5 kB] Get: 270 http://deb.debian.org/debian bullseye/main amd64 r-cran-xtable all 1:1.8-4-2 [689 kB] Get: 271 http://deb.debian.org/debian bullseye/main amd64 r-cran-sourcetools amd64 0.1.7-3 [45.3 kB] Get: 272 http://deb.debian.org/debian bullseye/main amd64 r-cran-fastmap amd64 1.1.0-1 [64.7 kB] Get: 273 http://deb.debian.org/debian bullseye/main amd64 r-cran-commonmark amd64 1.7-2 [111 kB] Get: 274 http://deb.debian.org/debian bullseye/main amd64 r-cran-shiny all 1.5.0+dfsg-2 [3599 kB] Get: 275 http://deb.debian.org/debian bullseye/main amd64 r-cran-miniui all 0.1.1.1-3 [35.9 kB] Get: 276 http://deb.debian.org/debian bullseye/main amd64 r-cran-shinyjs all 2.0.0-1 [1028 kB] Get: 277 http://deb.debian.org/debian bullseye/main amd64 r-cran-colourpicker all 1.1.0+dfsg-1 [1727 kB] Get: 278 http://deb.debian.org/debian bullseye/main amd64 r-cran-cowplot all 1.1.1+dfsg-1 [636 kB] Get: 279 http://deb.debian.org/debian bullseye/main amd64 r-cran-cpp11 all 0.2.6-1 [144 kB] Get: 280 http://deb.debian.org/debian bullseye/main amd64 r-cran-lazyeval amd64 0.2.2-1+b1 [142 kB] Get: 281 http://deb.debian.org/debian bullseye/main amd64 r-cran-crosstalk all 1.1.1+dfsg-2 [167 kB] Get: 282 http://deb.debian.org/debian bullseye/main amd64 r-cran-curl amd64 4.3+dfsg-1+b1 [151 kB] Get: 283 http://deb.debian.org/debian bullseye/main amd64 r-cran-data.table amd64 1.13.6+dfsg-1 [1715 kB] Get: 284 http://deb.debian.org/debian bullseye/main amd64 r-cran-deldir amd64 0.2-9-1 [273 kB] Get: 285 http://deb.debian.org/debian bullseye/main amd64 r-cran-generics all 0.1.0-1 [73.5 kB] Get: 286 http://deb.debian.org/debian bullseye/main amd64 r-cran-purrr amd64 0.3.4-1+b1 [398 kB] Get: 287 http://deb.debian.org/debian bullseye/main amd64 r-cran-tidyselect amd64 1.1.0+dfsg-1 [192 kB] Get: 288 http://deb.debian.org/debian bullseye/main amd64 r-cran-dplyr amd64 1.0.4-1 [1143 kB] Get: 289 http://deb.debian.org/debian bullseye/main amd64 r-cran-sitmo amd64 2.0.1-2+b1 [123 kB] Get: 290 http://deb.debian.org/debian bullseye/main amd64 r-cran-dqrng amd64 0.2.1+dfsg-4+b1 [116 kB] Get: 291 http://deb.debian.org/debian bullseye/main amd64 r-cran-survival amd64 3.2-7-1 [7631 kB] Get: 292 http://deb.debian.org/debian bullseye/main amd64 r-cran-fitdistrplus all 1.1-3-1 [2693 kB] Get: 293 http://deb.debian.org/debian bullseye/main amd64 r-cran-fnn amd64 1.1.3-2 [120 kB] Get: 294 http://deb.debian.org/debian bullseye/main amd64 r-cran-globals all 0.14.0-1 [105 kB] Get: 295 http://deb.debian.org/debian bullseye/main amd64 r-cran-listenv all 0.8.0+dfsg-1 [105 kB] Get: 296 http://deb.debian.org/debian bullseye/main amd64 r-cran-parallelly all 1.23.0-1 [222 kB] Get: 297 http://deb.debian.org/debian bullseye/main amd64 r-cran-future all 1.21.0+dfsg-1 [576 kB] Get: 298 http://deb.debian.org/debian bullseye/main amd64 r-cran-future.apply all 1.7.0-1 [146 kB] Get: 299 http://deb.debian.org/debian bullseye/main amd64 r-cran-gtools amd64 3.8.2-1+b1 [329 kB] Get: 300 http://deb.debian.org/debian bullseye/main amd64 r-cran-gdata all 2.18.0-3 [1031 kB] Get: 301 http://deb.debian.org/debian bullseye/main amd64 r-cran-ggrepel amd64 0.9.1-1 [375 kB] Get: 302 http://deb.debian.org/debian bullseye/main amd64 r-cran-plyr amd64 1.8.6-2 [830 kB] Get: 303 http://deb.debian.org/debian bullseye/main amd64 r-cran-ggridges all 0.5.3-1 [2205 kB] Get: 304 http://deb.debian.org/debian bullseye/main amd64 r-cran-goftest amd64 1.2-2-1+b1 [58.3 kB] Get: 305 http://deb.debian.org/debian bullseye/main amd64 r-cran-kernsmooth amd64 2.23-18-1 [91.1 kB] Get: 306 http://deb.debian.org/debian bullseye/main amd64 r-cran-gplots all 3.1.1-1 [607 kB] Get: 307 http://deb.debian.org/debian bullseye/main amd64 r-cran-gridextra all 2.3-3 [1024 kB] Get: 308 http://deb.debian.org/debian bullseye/main amd64 r-cran-openssl amd64 1.4.3+dfsg-2 [376 kB] Get: 309 http://deb.debian.org/debian bullseye/main amd64 r-cran-httr all 1.4.2-1 [478 kB] Get: 310 http://deb.debian.org/debian bullseye/main amd64 r-cran-ica all 1.0-2-3 [75.2 kB] Get: 311 http://deb.debian.org/debian bullseye/main amd64 r-cran-igraph amd64 1.2.6-1 [3521 kB] Get: 312 http://deb.debian.org/debian bullseye/main amd64 r-cran-irlba amd64 2.3.3-2 [296 kB] Get: 313 http://deb.debian.org/debian bullseye/main amd64 r-cran-rappdirs amd64 0.3.3-1 [47.4 kB] Get: 314 http://deb.debian.org/debian bullseye/main amd64 r-cran-reticulate amd64 1.18+dfsg-1 [555 kB] Get: 315 http://deb.debian.org/debian bullseye/main amd64 r-cran-leiden all 0.3.7+dfsg-1 [64.9 kB] Get: 316 http://deb.debian.org/debian bullseye/main amd64 r-cran-zoo amd64 1.8-8-1+b1 [1051 kB] Get: 317 http://deb.debian.org/debian bullseye/main amd64 r-cran-lmtest amd64 0.9.38-1 [395 kB] Get: 318 http://deb.debian.org/debian bullseye/main amd64 r-cran-matrixstats amd64 0.58.0-3 [664 kB] Get: 319 http://deb.debian.org/debian bullseye/main amd64 r-cran-patchwork all 1.1.1-1 [3211 kB] Get: 320 http://deb.debian.org/debian bullseye/main amd64 r-cran-pbapply all 1.4-3-1 [77.4 kB] Get: 321 http://deb.debian.org/debian bullseye/main amd64 r-cran-tidyr amd64 1.1.2-1 [786 kB] Get: 322 http://deb.debian.org/debian bullseye/main amd64 r-cran-plotly all 4.9.3+dfsg-2 [3266 kB] Get: 323 http://deb.debian.org/debian bullseye/main amd64 r-cran-png amd64 0.1-7-4 [40.7 kB] Get: 324 http://deb.debian.org/debian bullseye/main amd64 r-cran-polyclip amd64 1.10-0-2 [109 kB] Get: 325 http://deb.debian.org/debian bullseye/main amd64 r-cran-rann amd64 2.6.1-1+b2 [41.9 kB] Get: 326 http://deb.debian.org/debian bullseye/main amd64 r-cran-rcppannoy amd64 0.0.18-1 [372 kB] Get: 327 http://deb.debian.org/debian bullseye/main amd64 r-cran-rcpparmadillo amd64 0.10.2.1.0-1 [1149 kB] Get: 328 http://deb.debian.org/debian bullseye/main amd64 r-cran-rcppeigen amd64 0.3.3.9.1-1 [1351 kB] Get: 329 http://deb.debian.org/debian bullseye/main amd64 r-cran-rcppprogress all 0.4.2-2 [21.8 kB] Get: 330 http://deb.debian.org/debian bullseye/main amd64 r-cran-stringi amd64 1.5.3-1 [729 kB] Get: 331 http://deb.debian.org/debian bullseye/main amd64 r-cran-stringr all 1.4.0-2 [199 kB] Get: 332 http://deb.debian.org/debian bullseye/main amd64 r-cran-reshape2 amd64 1.4.4-2 [114 kB] Get: 333 http://deb.debian.org/debian bullseye/main amd64 r-cran-rocr all 1.0-11-2 [446 kB] Get: 334 http://deb.debian.org/debian bullseye/main amd64 r-cran-rpart amd64 4.1-15-2+b1 [702 kB] Get: 335 http://deb.debian.org/debian bullseye/main amd64 r-cran-rspectra amd64 0.16-0-1+b1 [398 kB] Get: 336 http://deb.debian.org/debian bullseye/main amd64 r-cran-rsvd all 1.0.3-3 [6129 kB] Get: 337 http://deb.debian.org/debian bullseye/main amd64 r-cran-rtsne amd64 0.15-2+b1 [97.9 kB] Get: 338 http://deb.debian.org/debian bullseye/main amd64 r-cran-scattermore amd64 0.7-2 [44.8 kB] Get: 339 http://deb.debian.org/debian bullseye/main amd64 r-cran-sctransform amd64 0.3.2-1 [398 kB] Get: 340 http://deb.debian.org/debian bullseye/main amd64 r-cran-seuratobject amd64 4.0.0-2 [713 kB] Get: 341 http://deb.debian.org/debian bullseye/main amd64 r-cran-spatstat.utils amd64 2.0-0-1 [321 kB] Get: 342 http://deb.debian.org/debian bullseye/main amd64 r-cran-spatstat.data all 1.7-0-1 [3996 kB] Get: 343 http://deb.debian.org/debian bullseye/main amd64 r-cran-tensor all 1.5-4 [15.6 kB] Get: 344 http://deb.debian.org/debian bullseye/main amd64 r-cran-spatstat amd64 1.64-1-1 [16.2 MB] Get: 345 http://deb.debian.org/debian bullseye/main amd64 r-cran-uwot amd64 0.1.10-1 [359 kB] Fetched 225 MB in 4s (51.9 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package bsdextrautils. 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Preparing to unpack .../8-python3.9-minimal_3.9.2-1_amd64.deb ... Unpacking python3.9-minimal (3.9.2-1) ... Setting up libpython3.9-minimal:amd64 (3.9.2-1) ... Setting up libexpat1:amd64 (2.2.10-2+deb11u5) ... Setting up python3.9-minimal (3.9.2-1) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20595 files and directories currently installed.) Preparing to unpack .../0-python3-minimal_3.9.2-3_amd64.deb ... Unpacking python3-minimal (3.9.2-3) ... Selecting previously unselected package media-types. Preparing to unpack .../1-media-types_4.0.0_all.deb ... Unpacking media-types (4.0.0) ... Selecting previously unselected package libmpdec3:amd64. Preparing to unpack .../2-libmpdec3_2.5.1-1_amd64.deb ... Unpacking libmpdec3:amd64 (2.5.1-1) ... Selecting previously unselected package readline-common. Preparing to unpack .../3-readline-common_8.1-1_all.deb ... Unpacking readline-common (8.1-1) ... Selecting previously unselected package libreadline8:amd64. Preparing to unpack .../4-libreadline8_8.1-1_amd64.deb ... Unpacking libreadline8:amd64 (8.1-1) ... Selecting previously unselected package libpython3.9-stdlib:amd64. Preparing to unpack .../5-libpython3.9-stdlib_3.9.2-1_amd64.deb ... Unpacking libpython3.9-stdlib:amd64 (3.9.2-1) ... Selecting previously unselected package python3.9. Preparing to unpack .../6-python3.9_3.9.2-1_amd64.deb ... Unpacking python3.9 (3.9.2-1) ... Selecting previously unselected package libpython3-stdlib:amd64. Preparing to unpack .../7-libpython3-stdlib_3.9.2-3_amd64.deb ... Unpacking libpython3-stdlib:amd64 (3.9.2-3) ... Setting up python3-minimal (3.9.2-3) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 21016 files and directories currently installed.) Preparing to unpack .../000-python3_3.9.2-3_amd64.deb ... Unpacking python3 (3.9.2-3) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../001-sensible-utils_0.0.14_all.deb ... Unpacking sensible-utils (0.0.14) ... Selecting previously unselected package openssl. Preparing to unpack .../002-openssl_1.1.1w-0+deb11u1_amd64.deb ... Unpacking openssl (1.1.1w-0+deb11u1) ... Selecting previously unselected package ca-certificates. Preparing to unpack .../003-ca-certificates_20210119_all.deb ... Unpacking ca-certificates (20210119) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../004-libmagic-mgc_1%3a5.39-3+deb11u1_amd64.deb ... Unpacking libmagic-mgc (1:5.39-3+deb11u1) ... Selecting previously unselected package libmagic1:amd64. Preparing to unpack .../005-libmagic1_1%3a5.39-3+deb11u1_amd64.deb ... Unpacking libmagic1:amd64 (1:5.39-3+deb11u1) ... Selecting previously unselected package file. Preparing to unpack .../006-file_1%3a5.39-3+deb11u1_amd64.deb ... Unpacking file (1:5.39-3+deb11u1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../007-gettext-base_0.21-4_amd64.deb ... Unpacking gettext-base (0.21-4) ... Selecting previously unselected package ucf. Preparing to unpack .../008-ucf_3.0043_all.deb ... Moving old data out of the way Unpacking ucf (3.0043) ... Selecting previously unselected package libsigsegv2:amd64. Preparing to unpack .../009-libsigsegv2_2.13-1_amd64.deb ... Unpacking libsigsegv2:amd64 (2.13-1) ... Selecting previously unselected package m4. Preparing to unpack .../010-m4_1.4.18-5_amd64.deb ... Unpacking m4 (1.4.18-5) ... Selecting previously unselected package autoconf. Preparing to unpack .../011-autoconf_2.69-14_all.deb ... Unpacking autoconf (2.69-14) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../012-autotools-dev_20180224.1+nmu1_all.deb ... Unpacking autotools-dev (20180224.1+nmu1) ... Selecting previously unselected package automake. 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Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libsub-override-perl. Preparing to unpack .../020-libsub-override-perl_0.09-2_all.deb ... Unpacking libsub-override-perl (0.09-2) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../021-libfile-stripnondeterminism-perl_1.12.0-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.12.0-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../022-dh-strip-nondeterminism_1.12.0-1_all.deb ... Unpacking dh-strip-nondeterminism (1.12.0-1) ... Selecting previously unselected package libelf1:amd64. Preparing to unpack .../023-libelf1_0.183-1_amd64.deb ... Unpacking libelf1:amd64 (0.183-1) ... Selecting previously unselected package dwz. Preparing to unpack .../024-dwz_0.13+20210201-1_amd64.deb ... Unpacking dwz (0.13+20210201-1) ... Selecting previously unselected package libicu67:amd64. 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Setting up libjs-jquery-ui (1.12.1+dfsg-8+deb11u2) ... Setting up libfreetype6:amd64 (2.10.4+dfsg-1+deb11u1) ... Setting up liblapack-dev:amd64 (3.9.0-3+deb11u1) ... update-alternatives: using /usr/lib/x86_64-linux-gnu/lapack/liblapack.so to provide /usr/lib/x86_64-linux-gnu/liblapack.so (liblapack.so-x86_64-linux-gnu) in auto mode Setting up gfortran-10 (10.2.1-6) ... Setting up libdata-optlist-perl (0.110-1.1) ... Setting up ucf (3.0043) ... Setting up autoconf (2.69-14) ... Setting up dh-strip-nondeterminism (1.12.0-1) ... Setting up dwz (0.13+20210201-1) ... Setting up groff-base (1.22.4-6) ... Setting up libncurses5-dev:amd64 (6.2+20201114-2+deb11u2) ... Setting up libcurl4:amd64 (7.74.0-1.3+deb11u12) ... Setting up libx11-6:amd64 (2:1.7.2-1+deb11u2) ... Setting up libharfbuzz0b:amd64 (2.7.4-1) ... Setting up libmro-compat-perl (0.13-1) ... Setting up libsm6:amd64 (2:1.2.3-1) ... Setting up libxmuu1:amd64 (2:1.1.2-2+b3) ... Setting up libpython3.9-stdlib:amd64 (3.9.2-1) ... 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Setting up gfortran (4:10.2.1-1) ... update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode Setting up dh-autoreconf (20) ... Setting up libmodule-runtime-perl (0.016-1) ... Setting up libdist-checkconflicts-perl (0.11-1.1) ... Setting up libxt6:amd64 (1:1.2.0-1) ... Setting up xauth (1:1.1-1) ... Setting up libxss1:amd64 (1:1.2.3-1) ... Setting up libfontconfig1:amd64 (2.13.1-4.2) ... Setting up python3.9 (3.9.2-1) ... Setting up fontconfig (2.13.1-4.2) ... Regenerating fonts cache... done. Setting up libxft2:amd64 (2.3.2-2) ... Setting up libmodule-implementation-perl (0.09-1.1) ... Setting up libpackage-stash-perl (0.39-1) ... Setting up libtk8.6:amd64 (8.6.11-2) ... Setting up libpango-1.0-0:amd64 (1.46.2-3) ... Setting up debhelper (13.3.4) ... Setting up python3 (3.9.2-3) ... Setting up libmodule-runtime-conflicts-perl (0.003-1.1) ... 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Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/reproducible-path/r-cran-seurat-4.0.0/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../r-cran-seurat_4.0.0-2_source.changes dpkg-buildpackage: info: source package r-cran-seurat dpkg-buildpackage: info: source version 4.0.0-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean --buildsystem R dh_auto_clean -O--buildsystem=R dh_autoreconf_clean -O--buildsystem=R dh_clean -O--buildsystem=R debian/rules binary dh binary --buildsystem R dh_update_autotools_config -O--buildsystem=R dh_autoreconf -O--buildsystem=R dh_auto_configure -O--buildsystem=R dh_auto_build -O--buildsystem=R dh_auto_test -O--buildsystem=R create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=R dh_prep -O--buildsystem=R dh_auto_install -O--buildsystem=R I: R packages needed for DEP8: testthat, hdf5r I: R Package: Seurat Version: 4.0.0 I: Building using R version 4.0.4-1 I: R API version: r-api-4.0 I: Using built-time from d/changelog: Wed, 10 Feb 2021 08:19:01 +0100 mkdir -p /build/reproducible-path/r-cran-seurat-4.0.0/debian/r-cran-seurat/usr/lib/R/site-library R CMD INSTALL -l /build/reproducible-path/r-cran-seurat-4.0.0/debian/r-cran-seurat/usr/lib/R/site-library --clean . "--built-timestamp='Wed, 10 Feb 2021 08:19:01 +0100'" * installing *source* package 'Seurat' ... ** package 'Seurat' successfully unpacked and MD5 sums checked ** using staged installation ** libs make[1]: Entering directory '/build/reproducible-path/r-cran-seurat-4.0.0/src' g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -I'/usr/lib/R/site-library/RcppEigen/include' -I'/usr/lib/R/site-library/RcppProgress/include' -fpic -g -O2 -ffile-prefix-map=/build/r-base-XqSJAD/r-base-4.0.4=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c ModularityOptimizer.cpp -o ModularityOptimizer.o g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -I'/usr/lib/R/site-library/RcppEigen/include' -I'/usr/lib/R/site-library/RcppProgress/include' -fpic -g -O2 -ffile-prefix-map=/build/r-base-XqSJAD/r-base-4.0.4=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c RModularityOptimizer.cpp -o RModularityOptimizer.o In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:397, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/RcppEigen/include/RcppEigenForward.h:30, from /usr/lib/R/site-library/RcppEigen/include/RcppEigen.h:25, from RModularityOptimizer.cpp:9: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:60:39: warning: ignoring attributes on template argument '__m128' [-Wignored-attributes] 60 | template<> struct is_arithmetic<__m128> { enum { value = true }; }; | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:61:40: warning: ignoring attributes on template argument '__m128i' [-Wignored-attributes] 61 | template<> struct is_arithmetic<__m128i> { enum { value = true }; }; | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:62:40: warning: ignoring attributes on template argument '__m128d' [-Wignored-attributes] 62 | template<> struct is_arithmetic<__m128d> { enum { value = true }; }; | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:161:43: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__m128'} [-Wignored-attributes] 161 | template<> struct unpacket_traits { typedef float type; enum {size=4, alignment=Aligned16}; typedef Packet4f half; }; | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:162:43: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__m128d'} [-Wignored-attributes] 162 | template<> struct unpacket_traits { typedef double type; enum {size=2, alignment=Aligned16}; typedef Packet2d half; }; | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:163:43: warning: ignoring attributes on template argument 'Eigen::internal::Packet4i' {aka '__m128i'} [-Wignored-attributes] 163 | template<> struct unpacket_traits { typedef int type; enum {size=4, alignment=Aligned16}; typedef Packet4i half; }; | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:718:35: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__m128'} [-Wignored-attributes] 718 | struct palign_impl | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:741:35: warning: ignoring attributes on template argument 'Eigen::internal::Packet4i' {aka '__m128i'} [-Wignored-attributes] 741 | struct palign_impl | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:764:35: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__m128d'} [-Wignored-attributes] 764 | struct palign_impl | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:778:34: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__m128'} [-Wignored-attributes] 778 | ptranspose(PacketBlock& kernel) { | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:783:34: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__m128d'} [-Wignored-attributes] 783 | ptranspose(PacketBlock& kernel) { | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:790:34: warning: ignoring attributes on template argument 'Eigen::internal::Packet4i' {aka '__m128i'} [-Wignored-attributes] 790 | ptranspose(PacketBlock& kernel) { | ^ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:377, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/RcppEigen/include/RcppEigenForward.h:30, from /usr/lib/R/site-library/RcppEigen/include/RcppEigen.h:25, from RModularityOptimizer.cpp:9: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:15:70: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__m128'} [-Wignored-attributes] 15 | template<> struct conj_helper { \ | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:232:1: note: in expansion of macro 'EIGEN_MAKE_CONJ_HELPER_CPLX_REAL' 232 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:22:70: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__m128'} [-Wignored-attributes] 22 | template<> struct conj_helper { \ | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:232:1: note: in expansion of macro 'EIGEN_MAKE_CONJ_HELPER_CPLX_REAL' 232 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:15:70: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__m128d'} [-Wignored-attributes] 15 | template<> struct conj_helper { \ | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:417:1: note: in expansion of macro 'EIGEN_MAKE_CONJ_HELPER_CPLX_REAL' 417 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:22:70: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__m128d'} [-Wignored-attributes] 22 | template<> struct conj_helper { \ | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:417:1: note: in expansion of macro 'EIGEN_MAKE_CONJ_HELPER_CPLX_REAL' 417 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:370, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/RcppEigen/include/RcppEigenForward.h:30, from /usr/lib/R/site-library/RcppEigen/include/RcppEigen.h:25, from RModularityOptimizer.cpp:9: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of 'struct Eigen::internal::find_best_packet': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from 'struct Eigen::internal::traits >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:243:49: required from 'struct Eigen::internal::traits >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:24:46: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(4) float>::half' {aka '__m128'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128'} [-Wignored-attributes] 205 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:439, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/RcppEigen/include/RcppEigenForward.h:30, from /usr/lib/R/site-library/RcppEigen/include/RcppEigen.h:25, from RModularityOptimizer.cpp:9: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from 'class Eigen::QuaternionBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:250:7: required from 'class Eigen::Quaternion' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:27:3: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:370, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/RcppEigen/include/RcppEigenForward.h:30, from /usr/lib/R/site-library/RcppEigen/include/RcppEigen.h:25, from RModularityOptimizer.cpp:9: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of 'struct Eigen::internal::find_best_packet': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from 'struct Eigen::internal::traits >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:243:49: required from 'struct Eigen::internal::traits >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:88:47: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 205 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:439, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/RcppEigen/include/RcppEigenForward.h:30, from /usr/lib/R/site-library/RcppEigen/include/RcppEigen.h:25, from RModularityOptimizer.cpp:9: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from 'class Eigen::QuaternionBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:250:7: required from 'class Eigen::Quaternion' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:92:3: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/SparseCore:37, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Sparse:26, from /usr/lib/R/site-library/RcppEigen/include/RcppEigenForward.h:31, from /usr/lib/R/site-library/RcppEigen/include/RcppEigen.h:25, from RModularityOptimizer.cpp:9: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of 'class Eigen::SparseMatrixBase >': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from 'class Eigen::SparseCompressedBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7: required from 'class Eigen::SparseMatrix' /usr/lib/R/site-library/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/ConstrainedConjGrad.h:61:25: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:370, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/RcppEigen/include/RcppEigenForward.h:30, from /usr/lib/R/site-library/RcppEigen/include/RcppEigen.h:25, from RModularityOptimizer.cpp:9: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of 'struct Eigen::internal::find_best_packet': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from 'struct Eigen::internal::traits >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' /usr/lib/R/site-library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:168:29: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) long long int>::half' {aka '__m128i'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] 205 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:439, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/RcppEigen/include/RcppEigenForward.h:30, from /usr/lib/R/site-library/RcppEigen/include/RcppEigen.h:25, from RModularityOptimizer.cpp:9: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' /usr/lib/R/site-library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:168:29: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase >, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase >, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from 'class Eigen::TransposeImpl, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from 'class Eigen::Transpose >' /usr/lib/R/site-library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:178:72: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' /usr/lib/R/site-library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:179:36: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 2>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 0, Eigen::Stride<0, 0> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, 0, Eigen::Stride<0, 0> >, 0>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from 'class Eigen::Map, 0, Eigen::Stride<0, 0> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:65:29: required from 'Eigen::Index Eigen::SparseCompressedBase::nonZeros() const [with Derived = Eigen::SparseMatrix; Eigen::Index = long int]' RModularityOptimizer.cpp:65:38: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase&) [with Derived = Eigen::Map, 0, Eigen::Stride<0, 0> >; Eigen::Index = long int]': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:225:63: required from 'static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Derived&, const Func&) [with Func = Eigen::internal::scalar_sum_op; Derived = Eigen::internal::redux_evaluator, 0, Eigen::Stride<0, 0> > >; Eigen::internal::redux_impl::Scalar = int]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::Map, 0, Eigen::Stride<0, 0> >; typename Eigen::internal::traits::Scalar = int]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:453:25: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::Map, 0, Eigen::Stride<0, 0> >; typename Eigen::internal::traits::Scalar = int]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:65:35: required from 'Eigen::Index Eigen::SparseCompressedBase::nonZeros() const [with Derived = Eigen::SparseMatrix; Eigen::Index = long int]' RModularityOptimizer.cpp:65:38: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:650:74: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] 650 | return internal::first_aligned::alignment),Derived>(m); | ^~~~~~~~~ g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -I'/usr/lib/R/site-library/RcppEigen/include' -I'/usr/lib/R/site-library/RcppProgress/include' -fpic -g -O2 -ffile-prefix-map=/build/r-base-XqSJAD/r-base-4.0.4=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c RcppExports.cpp -o RcppExports.o In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:397, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/RcppEigen/include/RcppEigenForward.h:30, from /usr/lib/R/site-library/RcppEigen/include/RcppEigen.h:25, from RcppExports.cpp:4: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:60:39: warning: ignoring attributes on template argument '__m128' [-Wignored-attributes] 60 | template<> struct is_arithmetic<__m128> { enum { value = true }; }; | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:61:40: warning: ignoring attributes on template argument '__m128i' [-Wignored-attributes] 61 | template<> struct is_arithmetic<__m128i> { enum { value = true }; }; | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:62:40: warning: ignoring attributes on template argument '__m128d' [-Wignored-attributes] 62 | template<> struct is_arithmetic<__m128d> { enum { value = true }; }; | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:161:43: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__m128'} [-Wignored-attributes] 161 | template<> struct unpacket_traits { typedef float type; enum {size=4, alignment=Aligned16}; typedef Packet4f half; }; | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:162:43: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__m128d'} [-Wignored-attributes] 162 | template<> struct unpacket_traits { typedef double type; enum {size=2, alignment=Aligned16}; typedef Packet2d half; }; | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:163:43: warning: ignoring attributes on template argument 'Eigen::internal::Packet4i' {aka '__m128i'} [-Wignored-attributes] 163 | template<> struct unpacket_traits { typedef int type; enum {size=4, alignment=Aligned16}; typedef Packet4i half; }; | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:718:35: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__m128'} [-Wignored-attributes] 718 | struct palign_impl | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:741:35: warning: ignoring attributes on template argument 'Eigen::internal::Packet4i' {aka '__m128i'} [-Wignored-attributes] 741 | struct palign_impl | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:764:35: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__m128d'} [-Wignored-attributes] 764 | struct palign_impl | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:778:34: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__m128'} [-Wignored-attributes] 778 | ptranspose(PacketBlock& kernel) { | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:783:34: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__m128d'} [-Wignored-attributes] 783 | ptranspose(PacketBlock& kernel) { | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:790:34: warning: ignoring attributes on template argument 'Eigen::internal::Packet4i' {aka '__m128i'} [-Wignored-attributes] 790 | ptranspose(PacketBlock& kernel) { | ^ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:377, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/RcppEigen/include/RcppEigenForward.h:30, from /usr/lib/R/site-library/RcppEigen/include/RcppEigen.h:25, from RcppExports.cpp:4: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:15:70: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__m128'} [-Wignored-attributes] 15 | template<> struct conj_helper { \ | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:232:1: note: in expansion of macro 'EIGEN_MAKE_CONJ_HELPER_CPLX_REAL' 232 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:22:70: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__m128'} [-Wignored-attributes] 22 | template<> struct conj_helper { \ | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:232:1: note: in expansion of macro 'EIGEN_MAKE_CONJ_HELPER_CPLX_REAL' 232 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:15:70: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__m128d'} [-Wignored-attributes] 15 | template<> struct conj_helper { \ | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:417:1: note: in expansion of macro 'EIGEN_MAKE_CONJ_HELPER_CPLX_REAL' 417 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:22:70: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__m128d'} [-Wignored-attributes] 22 | template<> struct conj_helper { \ | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:417:1: note: in expansion of macro 'EIGEN_MAKE_CONJ_HELPER_CPLX_REAL' 417 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:370, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/RcppEigen/include/RcppEigenForward.h:30, from /usr/lib/R/site-library/RcppEigen/include/RcppEigen.h:25, from RcppExports.cpp:4: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of 'struct Eigen::internal::find_best_packet': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from 'struct Eigen::internal::traits >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:243:49: required from 'struct Eigen::internal::traits >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:24:46: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(4) float>::half' {aka '__m128'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128'} [-Wignored-attributes] 205 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:439, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/RcppEigen/include/RcppEigenForward.h:30, from /usr/lib/R/site-library/RcppEigen/include/RcppEigen.h:25, from RcppExports.cpp:4: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from 'class Eigen::QuaternionBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:250:7: required from 'class Eigen::Quaternion' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:27:3: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:370, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/RcppEigen/include/RcppEigenForward.h:30, from /usr/lib/R/site-library/RcppEigen/include/RcppEigen.h:25, from RcppExports.cpp:4: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of 'struct Eigen::internal::find_best_packet': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from 'struct Eigen::internal::traits >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:243:49: required from 'struct Eigen::internal::traits >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:88:47: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 205 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:439, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/RcppEigen/include/RcppEigenForward.h:30, from /usr/lib/R/site-library/RcppEigen/include/RcppEigen.h:25, from RcppExports.cpp:4: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from 'class Eigen::QuaternionBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:250:7: required from 'class Eigen::Quaternion' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:92:3: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/SparseCore:37, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Sparse:26, from /usr/lib/R/site-library/RcppEigen/include/RcppEigenForward.h:31, from /usr/lib/R/site-library/RcppEigen/include/RcppEigen.h:25, from RcppExports.cpp:4: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of 'class Eigen::SparseMatrixBase >': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from 'class Eigen::SparseCompressedBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7: required from 'class Eigen::SparseMatrix' /usr/lib/R/site-library/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/ConstrainedConjGrad.h:61:25: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:370, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/RcppEigen/include/RcppEigenForward.h:30, from /usr/lib/R/site-library/RcppEigen/include/RcppEigen.h:25, from RcppExports.cpp:4: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of 'struct Eigen::internal::find_best_packet': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from 'struct Eigen::internal::traits >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' /usr/lib/R/site-library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:168:29: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) long long int>::half' {aka '__m128i'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] 205 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:439, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/RcppEigen/include/RcppEigenForward.h:30, from /usr/lib/R/site-library/RcppEigen/include/RcppEigen.h:25, from RcppExports.cpp:4: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' /usr/lib/R/site-library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:168:29: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase >, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase >, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from 'class Eigen::TransposeImpl, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from 'class Eigen::Transpose >' /usr/lib/R/site-library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:178:72: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' /usr/lib/R/site-library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:179:36: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/SparseCore:37, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Sparse:26, from /usr/lib/R/site-library/RcppEigen/include/RcppEigenForward.h:31, from /usr/lib/R/site-library/RcppEigen/include/RcppEigen.h:25, from RcppExports.cpp:4: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of 'class Eigen::SparseMatrixBase >': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from 'class Eigen::SparseCompressedBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7: required from 'class Eigen::SparseMatrix' RcppExports.cpp:66:105: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:370, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/RcppEigen/include/RcppEigenForward.h:30, from /usr/lib/R/site-library/RcppEigen/include/RcppEigen.h:25, from RcppExports.cpp:4: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of 'struct Eigen::internal::find_best_packet': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from 'struct Eigen::internal::traits >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Map.h:18:8: required from 'struct Eigen::internal::traits > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:32:48: required from 'struct Eigen::internal::accessors_level > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:109:75: required from 'class Eigen::Map >' RcppExports.cpp:89:67: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 205 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:439, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/RcppEigen/include/RcppEigenForward.h:30, from /usr/lib/R/site-library/RcppEigen/include/RcppEigen.h:25, from RcppExports.cpp:4: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Map.h:24:49: required from 'struct Eigen::internal::traits > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:32:48: required from 'struct Eigen::internal::accessors_level > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:109:75: required from 'class Eigen::Map >' RcppExports.cpp:89:67: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase >, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase >, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase >, 0>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: required from 'class Eigen::MapBase >, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from 'class Eigen::Map >' RcppExports.cpp:89:67: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' RcppExports.cpp:164:67: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:298:80: required from 'struct Eigen::internal::evaluator > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1391:8: required from 'struct Eigen::internal::evaluator >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseAssign.h:77:20: required from 'void Eigen::internal::assign_sparse_to_sparse(DstXprType&, const SrcXprType&) [with DstXprType = Eigen::SparseMatrix; SrcXprType = Eigen::SparseMatrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseAssign.h:132:28: required from 'static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::SparseMatrix; SrcXprType = Eigen::SparseMatrix; Functor = Eigen::internal::assign_op; typename SrcXprType::Scalar = double; typename DstXprType::Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::SparseMatrix; Src = Eigen::SparseMatrix; Func = Eigen::internal::assign_op]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:842:27: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&) [with Dst = Eigen::SparseMatrix; Src = Eigen::SparseMatrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseAssign.h:45:37: required from 'Derived& Eigen::SparseMatrixBase::operator=(const Derived&) [with Derived = Eigen::SparseMatrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:774:26: required from 'Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>& Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::operator=(const Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>&) [with _Scalar = double; int _Options = 0; _StorageIndex = int]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:709:13: required from 'Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::SparseMatrix(const Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>&) [with _Scalar = double; int _Options = 0; _StorageIndex = int]' RcppExports.cpp:24:174: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:298:80: required from 'struct Eigen::internal::evaluator > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1391:8: required from 'struct Eigen::internal::evaluator >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseAssign.h:77:20: required from 'void Eigen::internal::assign_sparse_to_sparse(DstXprType&, const SrcXprType&) [with DstXprType = Eigen::SparseMatrix; SrcXprType = Eigen::SparseMatrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseAssign.h:132:28: required from 'static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Eigen::internal::assign_op&) [with DstXprType = Eigen::SparseMatrix; SrcXprType = Eigen::SparseMatrix; Functor = Eigen::internal::assign_op; typename SrcXprType::Scalar = double; typename DstXprType::Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::SparseMatrix; Src = Eigen::SparseMatrix; Func = Eigen::internal::assign_op]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:842:27: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&) [with Dst = Eigen::SparseMatrix; Src = Eigen::SparseMatrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseAssign.h:45:37: required from 'Derived& Eigen::SparseMatrixBase::operator=(const Derived&) [with Derived = Eigen::SparseMatrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:774:26: required from 'Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>& Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::operator=(const Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>&) [with _Scalar = double; int _Options = 1; _StorageIndex = int]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:709:13: required from 'Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::SparseMatrix(const Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>&) [with _Scalar = double; int _Options = 1; _StorageIndex = int]' RcppExports.cpp:66:105: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 2>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 0, Eigen::Stride<0, 0> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, 0, Eigen::Stride<0, 0> >, 0>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from 'class Eigen::Map, 0, Eigen::Stride<0, 0> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:65:29: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/RcppEigenWrap.h:149:39: required from 'SEXPREC* Rcpp::RcppEigen::eigen_wrap(const T&) [with T = Eigen::SparseMatrix; SEXP = SEXPREC*]' /usr/lib/R/site-library/Rcpp/include/Rcpp/internal/wrap.h:776:49: required from 'SEXPREC* Rcpp::internal::wrap_dispatch_eigen(const T&, Rcpp::traits::true_type) [with T = Eigen::SparseMatrix; SEXP = SEXPREC*; Rcpp::traits::true_type = Rcpp::traits::integral_constant]' /usr/lib/R/site-library/Rcpp/include/Rcpp/internal/wrap.h:787:39: required from 'SEXPREC* Rcpp::internal::wrap_dispatch_unknown_importable(const T&, Rcpp::traits::false_type) [with T = Eigen::SparseMatrix; SEXP = SEXPREC*; Rcpp::traits::false_type = Rcpp::traits::integral_constant]' /usr/lib/R/site-library/Rcpp/include/Rcpp/internal/wrap.h:807:52: required from 'SEXPREC* Rcpp::internal::wrap_dispatch(const T&, Rcpp::traits::wrap_type_unknown_tag) [with T = Eigen::SparseMatrix; SEXP = SEXPREC*]' /usr/lib/R/site-library/Rcpp/include/Rcpp/internal/wrap_end.h:30:38: required from 'SEXPREC* Rcpp::wrap(const T&) [with T = Eigen::SparseMatrix; SEXP = SEXPREC*]' RcppExports.cpp:38:94: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase&) [with Derived = Eigen::Map, 0, Eigen::Stride<0, 0> >; Eigen::Index = long int]': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:225:63: required from 'static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Derived&, const Func&) [with Func = Eigen::internal::scalar_sum_op; Derived = Eigen::internal::redux_evaluator, 0, Eigen::Stride<0, 0> > >; Eigen::internal::redux_impl::Scalar = int]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::Map, 0, Eigen::Stride<0, 0> >; typename Eigen::internal::traits::Scalar = int]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:453:25: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::Map, 0, Eigen::Stride<0, 0> >; typename Eigen::internal::traits::Scalar = int]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:65:35: required from 'Eigen::Index Eigen::SparseCompressedBase::nonZeros() const [with Derived = Eigen::SparseMatrix; Eigen::Index = long int]' /usr/lib/R/site-library/RcppEigen/include/RcppEigenWrap.h:119:47: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/RcppEigenWrap.h:149:39: required from 'SEXPREC* Rcpp::RcppEigen::eigen_wrap(const T&) [with T = Eigen::SparseMatrix; SEXP = SEXPREC*]' /usr/lib/R/site-library/Rcpp/include/Rcpp/internal/wrap.h:776:49: required from 'SEXPREC* Rcpp::internal::wrap_dispatch_eigen(const T&, Rcpp::traits::true_type) [with T = Eigen::SparseMatrix; SEXP = SEXPREC*; Rcpp::traits::true_type = Rcpp::traits::integral_constant]' /usr/lib/R/site-library/Rcpp/include/Rcpp/internal/wrap.h:787:39: required from 'SEXPREC* Rcpp::internal::wrap_dispatch_unknown_importable(const T&, Rcpp::traits::false_type) [with T = Eigen::SparseMatrix; SEXP = SEXPREC*; Rcpp::traits::false_type = Rcpp::traits::integral_constant]' /usr/lib/R/site-library/Rcpp/include/Rcpp/internal/wrap.h:807:52: required from 'SEXPREC* Rcpp::internal::wrap_dispatch(const T&, Rcpp::traits::wrap_type_unknown_tag) [with T = Eigen::SparseMatrix; SEXP = SEXPREC*]' /usr/lib/R/site-library/Rcpp/include/Rcpp/internal/wrap_end.h:30:38: required from 'SEXPREC* Rcpp::wrap(const T&) [with T = Eigen::SparseMatrix; SEXP = SEXPREC*]' RcppExports.cpp:38:94: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:650:74: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] 650 | return internal::first_aligned::alignment),Derived>(m); | ^~~~~~~~~ g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -I'/usr/lib/R/site-library/RcppEigen/include' -I'/usr/lib/R/site-library/RcppProgress/include' -fpic -g -O2 -ffile-prefix-map=/build/r-base-XqSJAD/r-base-4.0.4=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c data_manipulation.cpp -o data_manipulation.o In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:397, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/RcppEigen/include/RcppEigenForward.h:30, from /usr/lib/R/site-library/RcppEigen/include/RcppEigen.h:25, from data_manipulation.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:60:39: warning: ignoring attributes on template argument '__m128' [-Wignored-attributes] 60 | template<> struct is_arithmetic<__m128> { enum { value = true }; }; | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:61:40: warning: ignoring attributes on template argument '__m128i' [-Wignored-attributes] 61 | template<> struct is_arithmetic<__m128i> { enum { value = true }; }; | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:62:40: warning: ignoring attributes on template argument '__m128d' [-Wignored-attributes] 62 | template<> struct is_arithmetic<__m128d> { enum { value = true }; }; | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:161:43: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__m128'} [-Wignored-attributes] 161 | template<> struct unpacket_traits { typedef float type; enum {size=4, alignment=Aligned16}; typedef Packet4f half; }; | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:162:43: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__m128d'} [-Wignored-attributes] 162 | template<> struct unpacket_traits { typedef double type; enum {size=2, alignment=Aligned16}; typedef Packet2d half; }; | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:163:43: warning: ignoring attributes on template argument 'Eigen::internal::Packet4i' {aka '__m128i'} [-Wignored-attributes] 163 | template<> struct unpacket_traits { typedef int type; enum {size=4, alignment=Aligned16}; typedef Packet4i half; }; | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:718:35: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__m128'} [-Wignored-attributes] 718 | struct palign_impl | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:741:35: warning: ignoring attributes on template argument 'Eigen::internal::Packet4i' {aka '__m128i'} [-Wignored-attributes] 741 | struct palign_impl | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:764:35: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__m128d'} [-Wignored-attributes] 764 | struct palign_impl | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:778:34: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__m128'} [-Wignored-attributes] 778 | ptranspose(PacketBlock& kernel) { | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:783:34: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__m128d'} [-Wignored-attributes] 783 | ptranspose(PacketBlock& kernel) { | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:790:34: warning: ignoring attributes on template argument 'Eigen::internal::Packet4i' {aka '__m128i'} [-Wignored-attributes] 790 | ptranspose(PacketBlock& kernel) { | ^ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:377, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/RcppEigen/include/RcppEigenForward.h:30, from /usr/lib/R/site-library/RcppEigen/include/RcppEigen.h:25, from data_manipulation.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:15:70: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__m128'} [-Wignored-attributes] 15 | template<> struct conj_helper { \ | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:232:1: note: in expansion of macro 'EIGEN_MAKE_CONJ_HELPER_CPLX_REAL' 232 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:22:70: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__m128'} [-Wignored-attributes] 22 | template<> struct conj_helper { \ | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:232:1: note: in expansion of macro 'EIGEN_MAKE_CONJ_HELPER_CPLX_REAL' 232 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:15:70: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__m128d'} [-Wignored-attributes] 15 | template<> struct conj_helper { \ | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:417:1: note: in expansion of macro 'EIGEN_MAKE_CONJ_HELPER_CPLX_REAL' 417 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:22:70: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__m128d'} [-Wignored-attributes] 22 | template<> struct conj_helper { \ | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:417:1: note: in expansion of macro 'EIGEN_MAKE_CONJ_HELPER_CPLX_REAL' 417 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:370, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/RcppEigen/include/RcppEigenForward.h:30, from /usr/lib/R/site-library/RcppEigen/include/RcppEigen.h:25, from data_manipulation.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of 'struct Eigen::internal::find_best_packet': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from 'struct Eigen::internal::traits >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:243:49: required from 'struct Eigen::internal::traits >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:24:46: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(4) float>::half' {aka '__m128'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128'} [-Wignored-attributes] 205 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:439, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/RcppEigen/include/RcppEigenForward.h:30, from /usr/lib/R/site-library/RcppEigen/include/RcppEigen.h:25, from data_manipulation.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from 'class Eigen::QuaternionBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:250:7: required from 'class Eigen::Quaternion' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:27:3: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:370, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/RcppEigen/include/RcppEigenForward.h:30, from /usr/lib/R/site-library/RcppEigen/include/RcppEigen.h:25, from data_manipulation.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of 'struct Eigen::internal::find_best_packet': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from 'struct Eigen::internal::traits >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:243:49: required from 'struct Eigen::internal::traits >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:88:47: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 205 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:439, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/RcppEigen/include/RcppEigenForward.h:30, from /usr/lib/R/site-library/RcppEigen/include/RcppEigen.h:25, from data_manipulation.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from 'class Eigen::QuaternionBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:250:7: required from 'class Eigen::Quaternion' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:92:3: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/SparseCore:37, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Sparse:26, from /usr/lib/R/site-library/RcppEigen/include/RcppEigenForward.h:31, from /usr/lib/R/site-library/RcppEigen/include/RcppEigen.h:25, from data_manipulation.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of 'class Eigen::SparseMatrixBase >': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from 'class Eigen::SparseCompressedBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7: required from 'class Eigen::SparseMatrix' /usr/lib/R/site-library/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/ConstrainedConjGrad.h:61:25: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:370, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/RcppEigen/include/RcppEigenForward.h:30, from /usr/lib/R/site-library/RcppEigen/include/RcppEigen.h:25, from data_manipulation.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of 'struct Eigen::internal::find_best_packet': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from 'struct Eigen::internal::traits >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' /usr/lib/R/site-library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:168:29: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) long long int>::half' {aka '__m128i'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] 205 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:439, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/RcppEigen/include/RcppEigenForward.h:30, from /usr/lib/R/site-library/RcppEigen/include/RcppEigen.h:25, from data_manipulation.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' /usr/lib/R/site-library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:168:29: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase >, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase >, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from 'class Eigen::TransposeImpl, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from 'class Eigen::Transpose >' /usr/lib/R/site-library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:178:72: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' /usr/lib/R/site-library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:179:36: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:370, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/RcppEigen/include/RcppEigenForward.h:30, from /usr/lib/R/site-library/RcppEigen/include/RcppEigen.h:25, from data_manipulation.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of 'struct Eigen::internal::find_best_packet': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from 'struct Eigen::internal::traits >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' data_manipulation.cpp:18:21: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 205 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:439, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/RcppEigen/include/RcppEigenForward.h:30, from /usr/lib/R/site-library/RcppEigen/include/RcppEigen.h:25, from data_manipulation.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' data_manipulation.cpp:18:21: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/SparseCore:37, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Sparse:26, from /usr/lib/R/site-library/RcppEigen/include/RcppEigenForward.h:31, from /usr/lib/R/site-library/RcppEigen/include/RcppEigen.h:25, from data_manipulation.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of 'class Eigen::SparseMatrixBase > >': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from 'class Eigen::SparseCompressedBase > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseTranspose.h:22:9: required from 'class Eigen::internal::SparseTransposeImpl, 1024>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseTranspose.h:45:37: required from 'class Eigen::TransposeImpl, Eigen::Sparse>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from 'class Eigen::Transpose >' data_manipulation.cpp:18:46: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:439, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/RcppEigen/include/RcppEigenForward.h:30, from /usr/lib/R/site-library/RcppEigen/include/RcppEigen.h:25, from data_manipulation.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::Matrix >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::Matrix > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, Eigen::Matrix > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from 'class Eigen::CwiseNullaryOp, Eigen::Matrix >' data_manipulation.cpp:18:83: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, Eigen::CwiseNullaryOp, Eigen::Matrix >, 0>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >, Eigen::CwiseNullaryOp, Eigen::Matrix >, 0> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >, Eigen::CwiseNullaryOp, Eigen::Matrix >, 0> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base >, Eigen::CwiseNullaryOp, Eigen::Matrix >, 0, 7>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl >, Eigen::CwiseNullaryOp, Eigen::Matrix >, 0, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product >, Eigen::CwiseNullaryOp, Eigen::Matrix >, 0>' data_manipulation.cpp:18:83: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/SparseCore:37, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Sparse:26, from /usr/lib/R/site-library/RcppEigen/include/RcppEigenForward.h:31, from /usr/lib/R/site-library/RcppEigen/include/RcppEigen.h:25, from data_manipulation.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of 'class Eigen::SparseMatrixBase >': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from 'class Eigen::SparseCompressedBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7: required from 'class Eigen::SparseMatrix' data_manipulation.cpp:75:127: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:439, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/RcppEigen/include/RcppEigenForward.h:30, from /usr/lib/R/site-library/RcppEigen/include/RcppEigen.h:25, from data_manipulation.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Map.h:24:49: required from 'struct Eigen::internal::traits > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:32:48: required from 'struct Eigen::internal::accessors_level > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:109:75: required from 'class Eigen::Map >' data_manipulation.cpp:131:88: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase >, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase >, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase >, 0>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: required from 'class Eigen::MapBase >, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from 'class Eigen::Map >' data_manipulation.cpp:131:88: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from 'class Eigen::Array' data_manipulation.cpp:136:20: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, -1, 1, true>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase >, -1, 1, true>, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase >, -1, 1, true>, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >, -1, 1, true> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >, -1, 1, true> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase >, -1, 1, true>, 0>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: required from 'class Eigen::MapBase >, -1, 1, true>, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from 'class Eigen::internal::BlockImpl_dense >, -1, 1, true, true>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: required from 'class Eigen::BlockImpl >, -1, 1, true, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from 'class Eigen::Block >, -1, 1, true>' data_manipulation.cpp:136:33: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, -1, 1, true> >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase >, -1, 1, true> >, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase >, -1, 1, true> >, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >, -1, 1, true> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase >, -1, 1, true> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:42:7: required from 'class Eigen::ArrayWrapper >, -1, 1, true> >' data_manipulation.cpp:136:41: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Array >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Array > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::Array > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from 'class Eigen::CwiseNullaryOp, const Eigen::Array >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:38:28: required from 'struct Eigen::internal::traits, const Eigen::Array, const Eigen::CwiseNullaryOp, const Eigen::Array > > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::Array, const Eigen::CwiseNullaryOp, const Eigen::Array >, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::CwiseNullaryOp, const Eigen::Array > >' data_manipulation.cpp:138:32: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Array, const Eigen::CwiseNullaryOp, const Eigen::Array > >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Array, const Eigen::CwiseNullaryOp, const Eigen::Array > > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::Array, const Eigen::CwiseNullaryOp, const Eigen::Array > > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::Array, const Eigen::CwiseNullaryOp, const Eigen::Array >, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::CwiseNullaryOp, const Eigen::Array > >' data_manipulation.cpp:138:32: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::CwiseNullaryOp, const Eigen::Array > > >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::CwiseNullaryOp, const Eigen::Array > > > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::CwiseNullaryOp, const Eigen::Array > > > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from 'class Eigen::CwiseUnaryOpImpl, const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::CwiseNullaryOp, const Eigen::Array > >, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from 'class Eigen::CwiseUnaryOp, const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::CwiseNullaryOp, const Eigen::Array > > >' data_manipulation.cpp:138:48: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/SparseCore:37, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Sparse:26, from /usr/lib/R/site-library/RcppEigen/include/RcppEigenForward.h:31, from /usr/lib/R/site-library/RcppEigen/include/RcppEigen.h:25, from data_manipulation.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of 'class Eigen::SparseMatrixBase, -1, 1, true> >': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from 'class Eigen::SparseCompressedBase, -1, 1, true> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseBlock.h:96:7: required from 'class Eigen::internal::sparse_matrix_block_impl, -1, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseBlock.h:287:7: required from 'class Eigen::BlockImpl, -1, 1, true, Eigen::Sparse>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from 'class Eigen::Block, -1, 1, true>' data_manipulation.cpp:186:52: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:439, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/RcppEigen/include/RcppEigenForward.h:30, from /usr/lib/R/site-library/RcppEigen/include/RcppEigen.h:25, from data_manipulation.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, -1, 1, true>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, -1, 1, true>, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, -1, 1, true>, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, -1, 1, true> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, -1, 1, true> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, -1, 1, true>, 0>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: required from 'class Eigen::MapBase, -1, 1, true>, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from 'class Eigen::internal::BlockImpl_dense, -1, 1, true, true>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: required from 'class Eigen::BlockImpl, -1, 1, true, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from 'class Eigen::Block, -1, 1, true>' data_manipulation.cpp:187:21: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase >, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase >, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:42:7: required from 'class Eigen::ArrayWrapper >' data_manipulation.cpp:187:36: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array >, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > >' data_manipulation.cpp:187:40: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array >, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > >' data_manipulation.cpp:187:51: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase >, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase >, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from 'class Eigen::TransposeImpl, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from 'class Eigen::Transpose >' data_manipulation.cpp:194:31: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::internal::member_mean, 0>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::internal::member_mean, 0> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, Eigen::internal::member_mean, 0> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/VectorwiseOp.h:56:7: required from 'class Eigen::PartialReduxExpr, Eigen::internal::member_mean, 0>' data_manipulation.cpp:229:46: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::internal::member_mean, 0>, -1, 1>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::internal::member_mean, 0>, -1, 1> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, Eigen::internal::member_mean, 0>, -1, 1> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Replicate.h:61:65: required from 'class Eigen::Replicate, Eigen::internal::member_mean, 0>, -1, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:38:28: required from 'struct Eigen::internal::traits, const Eigen::Matrix, const Eigen::Replicate, Eigen::internal::member_mean, 0>, -1, 1> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::Matrix, const Eigen::Replicate, Eigen::internal::member_mean, 0>, -1, 1>, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Replicate, Eigen::internal::member_mean, 0>, -1, 1> >' data_manipulation.cpp:229:46: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Matrix, const Eigen::Replicate, Eigen::internal::member_mean, 0>, -1, 1> >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Matrix, const Eigen::Replicate, Eigen::internal::member_mean, 0>, -1, 1> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Matrix, const Eigen::Replicate, Eigen::internal::member_mean, 0>, -1, 1> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::Matrix, const Eigen::Replicate, Eigen::internal::member_mean, 0>, -1, 1>, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Replicate, Eigen::internal::member_mean, 0>, -1, 1> >' data_manipulation.cpp:229:46: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from 'class Eigen::DenseCoeffsBase >, 2>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from 'class Eigen::TransposeImpl, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from 'class Eigen::Transpose >' data_manipulation.cpp:231:38: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, Eigen::Matrix, 0>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >, Eigen::Matrix, 0> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >, Eigen::Matrix, 0> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base >, Eigen::Matrix, 0, 8>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl >, Eigen::Matrix, 0, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product >, Eigen::Matrix, 0>' data_manipulation.cpp:231:42: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Matrix >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Matrix > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Matrix > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from 'class Eigen::CwiseNullaryOp, const Eigen::Matrix >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:38:28: required from 'struct Eigen::internal::traits, const Eigen::Product >, Eigen::Matrix, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::Product >, Eigen::Matrix, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::Product >, Eigen::Matrix, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >' data_manipulation.cpp:231:70: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Product >, Eigen::Matrix, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Product >, Eigen::Matrix, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Product >, Eigen::Matrix, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::Product >, Eigen::Matrix, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::Product >, Eigen::Matrix, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >' data_manipulation.cpp:231:70: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, 1, -1, false>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase >, 1, -1, false>, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase >, 1, -1, false>, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >, 1, -1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >, 1, -1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase >, 1, -1, false>, 0>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: required from 'class Eigen::MapBase >, 1, -1, false>, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from 'class Eigen::internal::BlockImpl_dense >, 1, -1, false, true>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: required from 'class Eigen::BlockImpl >, 1, -1, false, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from 'class Eigen::Block >, 1, -1, false>' data_manipulation.cpp:368:31: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, 1, -1, false> >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase >, 1, -1, false> >, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase >, 1, -1, false> >, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >, 1, -1, false> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase >, 1, -1, false> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:42:7: required from 'class Eigen::ArrayWrapper >, 1, -1, false> >' data_manipulation.cpp:368:39: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 2>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 0, Eigen::Stride<0, 0> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, 0, Eigen::Stride<0, 0> >, 0>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from 'class Eigen::Map, 0, Eigen::Stride<0, 0> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:65:29: required from 'Eigen::Index Eigen::SparseCompressedBase::nonZeros() const [with Derived = Eigen::SparseMatrix; Eigen::Index = long int]' data_manipulation.cpp:95:37: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:298:80: required from 'struct Eigen::internal::evaluator > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1391:8: required from 'struct Eigen::internal::evaluator >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseTranspose.h:58:63: required from 'struct Eigen::internal::unary_evaluator >, Eigen::internal::IteratorBased, double>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from 'struct Eigen::internal::evaluator > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1067:93: required from 'Eigen::SparseMatrix<_Scalar, _Options, _StorageIndex>& Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::operator=(const Eigen::SparseMatrixBase&) [with OtherDerived = Eigen::Transpose >; _Scalar = double; int _Options = 0; _StorageIndex = int]' data_manipulation.cpp:150:23: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 0, Eigen::Stride<0, 0> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, 0, Eigen::Stride<0, 0> >, 0>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: required from 'class Eigen::MapBase, 0, Eigen::Stride<0, 0> >, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from 'class Eigen::Map, 0, Eigen::Stride<0, 0> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1084:12: required from 'Eigen::SparseMatrix<_Scalar, _Options, _StorageIndex>& Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::operator=(const Eigen::SparseMatrixBase&) [with OtherDerived = Eigen::Transpose >; _Scalar = double; int _Options = 0; _StorageIndex = int]' data_manipulation.cpp:150:23: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, -1, -1, false>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, -1, -1, false>, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, -1, -1, false>, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, -1, -1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, -1, -1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, -1, -1, false>, 0>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: required from 'class Eigen::MapBase, -1, -1, false>, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from 'class Eigen::internal::BlockImpl_dense, -1, -1, false, true>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: required from 'class Eigen::BlockImpl, -1, -1, false, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from 'class Eigen::Block, -1, -1, false>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CommaInitializer.h:95:21: required from 'Eigen::CommaInitializer& Eigen::CommaInitializer::operator,(const Eigen::DenseBase&) [with OtherDerived = Eigen::Matrix; XprType = Eigen::Matrix]' data_manipulation.cpp:249:17: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:298:80: required from 'struct Eigen::internal::evaluator > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1391:8: required from 'struct Eigen::internal::evaluator >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1067:93: required from 'Eigen::SparseMatrix<_Scalar, _Options, _StorageIndex>& Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::operator=(const Eigen::SparseMatrixBase&) [with OtherDerived = Eigen::SparseMatrix; _Scalar = double; int _Options = 0; _StorageIndex = int]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:949:7: required from 'void Eigen::internal::set_from_triplets(const InputIterator&, const InputIterator&, SparseMatrixType&, DupFunctor) [with InputIterator = __gnu_cxx::__normal_iterator*, std::vector > >; SparseMatrixType = Eigen::SparseMatrix; DupFunctor = Eigen::internal::scalar_sum_op]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:996:92: required from 'void Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::setFromTriplets(const InputIterators&, const InputIterators&) [with InputIterators = __gnu_cxx::__normal_iterator*, std::vector > >; _Scalar = double; int _Options = 0; _StorageIndex = int]' data_manipulation.cpp:110:70: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::Matrix >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::Matrix > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, Eigen::Matrix > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from 'class Eigen::CwiseNullaryOp, Eigen::Matrix >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:327:30: required from 'Derived& Eigen::DenseBase::setConstant(const Scalar&) [with Derived = Eigen::Map, 0, Eigen::Stride<0, 0> >; Eigen::DenseBase::Scalar = int]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:501:10: required from 'Derived& Eigen::DenseBase::setZero() [with Derived = Eigen::Map, 0, Eigen::Stride<0, 0> >]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1084:73: required from 'Eigen::SparseMatrix<_Scalar, _Options, _StorageIndex>& Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::operator=(const Eigen::SparseMatrixBase&) [with OtherDerived = Eigen::Transpose >; _Scalar = double; int _Options = 0; _StorageIndex = int]' data_manipulation.cpp:150:23: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/SparseCore:37, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Sparse:26, from /usr/lib/R/site-library/RcppEigen/include/RcppEigenForward.h:31, from /usr/lib/R/site-library/RcppEigen/include/RcppEigen.h:25, from data_manipulation.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of 'class Eigen::SparseMatrixBase, 0, Eigen::OuterStride<> > >': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from 'class Eigen::SparseCompressedBase, 0, Eigen::OuterStride<> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMap.h:50:7: required from 'class Eigen::SparseMapBase, 0, Eigen::OuterStride<> >, 0>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseRef.h:83:34: required from 'class Eigen::internal::SparseRefBase, 0, Eigen::OuterStride<> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseRef.h:177:7: required from 'class Eigen::Ref, 0, Eigen::OuterStride<> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseBlock.h:128:88: required from 'Eigen::internal::sparse_matrix_block_impl::BlockType& Eigen::internal::sparse_matrix_block_impl::operator=(const Eigen::SparseMatrixBase&) [with OtherDerived = Eigen::Block, -1, 1, true>; SparseMatrixType = Eigen::SparseMatrix; int BlockRows = -1; int BlockCols = 1; Eigen::internal::sparse_matrix_block_impl::BlockType = Eigen::Block, -1, 1, true>]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseBlock.h:216:34: required from 'Eigen::internal::sparse_matrix_block_impl::BlockType& Eigen::internal::sparse_matrix_block_impl::operator=(const BlockType&) [with SparseMatrixType = Eigen::SparseMatrix; int BlockRows = -1; int BlockCols = 1; Eigen::internal::sparse_matrix_block_impl::BlockType = Eigen::Block, -1, 1, true>]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:111:5: required from 'Eigen::Block& Eigen::Block::operator=(const Eigen::Block&) [with XprType = Eigen::SparseMatrix; int BlockRows = -1; int BlockCols = 1; bool InnerPanel = true]' data_manipulation.cpp:409:42: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:370, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/RcppEigen/include/RcppEigenForward.h:30, from /usr/lib/R/site-library/RcppEigen/include/RcppEigen.h:25, from data_manipulation.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of 'struct Eigen::internal::find_best_packet': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from 'struct Eigen::internal::traits >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Array.h:17:8: required from 'struct Eigen::internal::traits >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from 'class Eigen::Array' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMap.h:70:30: required from 'class Eigen::SparseMapBase, 0, Eigen::OuterStride<> >, 0>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseRef.h:83:34: required from 'class Eigen::internal::SparseRefBase, 0, Eigen::OuterStride<> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseRef.h:177:7: required from 'class Eigen::Ref, 0, Eigen::OuterStride<> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseBlock.h:128:88: required from 'Eigen::internal::sparse_matrix_block_impl::BlockType& Eigen::internal::sparse_matrix_block_impl::operator=(const Eigen::SparseMatrixBase&) [with OtherDerived = Eigen::Block, -1, 1, true>; SparseMatrixType = Eigen::SparseMatrix; int BlockRows = -1; int BlockCols = 1; Eigen::internal::sparse_matrix_block_impl::BlockType = Eigen::Block, -1, 1, true>]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseBlock.h:216:34: required from 'Eigen::internal::sparse_matrix_block_impl::BlockType& Eigen::internal::sparse_matrix_block_impl::operator=(const BlockType&) [with SparseMatrixType = Eigen::SparseMatrix; int BlockRows = -1; int BlockCols = 1; Eigen::internal::sparse_matrix_block_impl::BlockType = Eigen::Block, -1, 1, true>]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:111:5: required from 'Eigen::Block& Eigen::Block::operator=(const Eigen::Block&) [with XprType = Eigen::SparseMatrix; int BlockRows = -1; int BlockCols = 1; bool InnerPanel = true]' data_manipulation.cpp:409:42: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) long long int>::half' {aka '__m128i'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] 205 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:439, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/RcppEigen/include/RcppEigenForward.h:30, from /usr/lib/R/site-library/RcppEigen/include/RcppEigen.h:25, from data_manipulation.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseRef.h:83:34: required from 'class Eigen::internal::SparseRefBase, 0, Eigen::OuterStride<> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseRef.h:177:7: required from 'class Eigen::Ref, 0, Eigen::OuterStride<> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseBlock.h:128:88: required from 'Eigen::internal::sparse_matrix_block_impl::BlockType& Eigen::internal::sparse_matrix_block_impl::operator=(const Eigen::SparseMatrixBase&) [with OtherDerived = Eigen::Block, -1, 1, true>; SparseMatrixType = Eigen::SparseMatrix; int BlockRows = -1; int BlockCols = 1; Eigen::internal::sparse_matrix_block_impl::BlockType = Eigen::Block, -1, 1, true>]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseBlock.h:216:34: required from 'Eigen::internal::sparse_matrix_block_impl::BlockType& Eigen::internal::sparse_matrix_block_impl::operator=(const BlockType&) [with SparseMatrixType = Eigen::SparseMatrix; int BlockRows = -1; int BlockCols = 1; Eigen::internal::sparse_matrix_block_impl::BlockType = Eigen::Block, -1, 1, true>]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:111:5: required from 'Eigen::Block& Eigen::Block::operator=(const Eigen::Block&) [with XprType = Eigen::SparseMatrix; int BlockRows = -1; int BlockCols = 1; bool InnerPanel = true]' data_manipulation.cpp:409:42: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/SparseCore:37, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Sparse:26, from /usr/lib/R/site-library/RcppEigen/include/RcppEigenForward.h:31, from /usr/lib/R/site-library/RcppEigen/include/RcppEigen.h:25, from data_manipulation.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of 'class Eigen::SparseMatrixBase, 0, Eigen::OuterStride<> >, -1, 1, true> >': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseBlock.h:17:7: required from 'class Eigen::BlockImpl, 0, Eigen::OuterStride<> >, -1, 1, true, Eigen::Sparse>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from 'class Eigen::Block, 0, Eigen::OuterStride<> >, -1, 1, true>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseBlock.h:194:85: required from 'Eigen::internal::sparse_matrix_block_impl::BlockType& Eigen::internal::sparse_matrix_block_impl::operator=(const Eigen::SparseMatrixBase&) [with OtherDerived = Eigen::Block, -1, 1, true>; SparseMatrixType = Eigen::SparseMatrix; int BlockRows = -1; int BlockCols = 1; Eigen::internal::sparse_matrix_block_impl::BlockType = Eigen::Block, -1, 1, true>]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseBlock.h:216:34: required from 'Eigen::internal::sparse_matrix_block_impl::BlockType& Eigen::internal::sparse_matrix_block_impl::operator=(const BlockType&) [with SparseMatrixType = Eigen::SparseMatrix; int BlockRows = -1; int BlockCols = 1; Eigen::internal::sparse_matrix_block_impl::BlockType = Eigen::Block, -1, 1, true>]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:111:5: required from 'Eigen::Block& Eigen::Block::operator=(const Eigen::Block&) [with XprType = Eigen::SparseMatrix; int BlockRows = -1; int BlockCols = 1; bool InnerPanel = true]' data_manipulation.cpp:409:42: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:439, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/RcppEigen/include/RcppEigenForward.h:30, from /usr/lib/R/site-library/RcppEigen/include/RcppEigen.h:25, from data_manipulation.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase&) [with Derived = Eigen::Array; Eigen::Index = long int]': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:225:63: required from 'static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Derived&, const Func&) [with Func = Eigen::internal::scalar_sum_op; Derived = Eigen::internal::redux_evaluator >; Eigen::internal::redux_impl::Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::Array; typename Eigen::internal::traits::Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:468:32: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::mean() const [with Derived = Eigen::Array; typename Eigen::internal::traits::Scalar = double]' data_manipulation.cpp:137:29: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:650:74: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 650 | return internal::first_aligned::alignment),Derived>(m); | ^~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase&) [with Derived = Eigen::CwiseUnaryOp, const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::CwiseNullaryOp, const Eigen::Array > > >; Eigen::Index = long int]': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:225:63: required from 'static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Derived&, const Func&) [with Func = Eigen::internal::scalar_sum_op; Derived = Eigen::internal::redux_evaluator, const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::CwiseNullaryOp, const Eigen::Array > > > >; Eigen::internal::redux_impl::Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseUnaryOp, const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::CwiseNullaryOp, const Eigen::Array > > >; typename Eigen::internal::traits::Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:453:25: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::CwiseUnaryOp, const Eigen::CwiseBinaryOp, const Eigen::Array, const Eigen::CwiseNullaryOp, const Eigen::Array > > >; typename Eigen::internal::traits::Scalar = double]' data_manipulation.cpp:138:54: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:650:74: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase >, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase >, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from 'class Eigen::TransposeImpl, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from 'class Eigen::Transpose >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:829:17: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Array; Src = Eigen::ArrayWrapper >, 1, -1, false> >; Func = Eigen::internal::assign_op]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from 'Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::ArrayWrapper >, 1, -1, false> >; Derived = Eigen::Array]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:19: required from 'Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::ArrayWrapper >, 1, -1, false> >; Derived = Eigen::Array]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Array.h:242:29: required from 'Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Array(const Eigen::EigenBase&, typename Eigen::internal::enable_if >::Scalar>::value, Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::PrivateType>::type) [with OtherDerived = Eigen::ArrayWrapper >, 1, -1, false> >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1; typename Eigen::internal::enable_if >::Scalar>::value, Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::PrivateType>::type = Eigen::Array::PrivateType]' data_manipulation.cpp:368:39: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0, Eigen::OuterStride<> >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:298:80: required from 'struct Eigen::internal::evaluator, 0, Eigen::OuterStride<> > > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseRef.h:364:8: required from 'struct Eigen::internal::evaluator, 0, Eigen::OuterStride<> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseBlock.h:45:21: required from 'Eigen::Index Eigen::BlockImpl::nonZeros() const [with XprType = Eigen::Ref, 0, Eigen::OuterStride<> >; int BlockRows = -1; int BlockCols = 1; Eigen::Index = long int]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseBlock.h:194:97: required from 'Eigen::internal::sparse_matrix_block_impl::BlockType& Eigen::internal::sparse_matrix_block_impl::operator=(const Eigen::SparseMatrixBase&) [with OtherDerived = Eigen::Block, -1, 1, true>; SparseMatrixType = Eigen::SparseMatrix; int BlockRows = -1; int BlockCols = 1; Eigen::internal::sparse_matrix_block_impl::BlockType = Eigen::Block, -1, 1, true>]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseBlock.h:216:34: required from 'Eigen::internal::sparse_matrix_block_impl::BlockType& Eigen::internal::sparse_matrix_block_impl::operator=(const BlockType&) [with SparseMatrixType = Eigen::SparseMatrix; int BlockRows = -1; int BlockCols = 1; Eigen::internal::sparse_matrix_block_impl::BlockType = Eigen::Block, -1, 1, true>]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:111:5: required from 'Eigen::Block& Eigen::Block::operator=(const Eigen::Block&) [with XprType = Eigen::SparseMatrix; int BlockRows = -1; int BlockCols = 1; bool InnerPanel = true]' data_manipulation.cpp:409:42: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase&) [with Derived = Eigen::Map, 0, Eigen::Stride<0, 0> >; Eigen::Index = long int]': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:225:63: required from 'static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Derived&, const Func&) [with Func = Eigen::internal::scalar_sum_op; Derived = Eigen::internal::redux_evaluator, 0, Eigen::Stride<0, 0> > >; Eigen::internal::redux_impl::Scalar = int]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::Map, 0, Eigen::Stride<0, 0> >; typename Eigen::internal::traits::Scalar = int]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:453:25: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::Map, 0, Eigen::Stride<0, 0> >; typename Eigen::internal::traits::Scalar = int]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:65:35: required from 'Eigen::Index Eigen::SparseCompressedBase::nonZeros() const [with Derived = Eigen::SparseMatrix; Eigen::Index = long int]' data_manipulation.cpp:95:37: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:650:74: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] 650 | return internal::first_aligned::alignment),Derived>(m); | ^~~~~~~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:445, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/RcppEigen/include/RcppEigenForward.h:30, from /usr/lib/R/site-library/RcppEigen/include/RcppEigen.h:25, from data_manipulation.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator >, -1, 1, true> >': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1338:41: required from 'struct Eigen::internal::evaluator_wrapper_base >, -1, 1, true> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1416:8: required from 'struct Eigen::internal::unary_evaluator >, -1, 1, true> >, Eigen::internal::IndexBased, double>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from 'struct Eigen::internal::evaluator >, -1, 1, true> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:730:20: required from 'void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Array; SrcXprType = Eigen::ArrayWrapper >, -1, 1, true> >; Functor = Eigen::internal::assign_op]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31: required from 'static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Array; SrcXprType = Eigen::ArrayWrapper >, -1, 1, true> >; Functor = Eigen::internal::assign_op; Weak = void]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Array; Src = Eigen::ArrayWrapper >, -1, 1, true> >; Func = Eigen::internal::assign_op]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from 'Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::ArrayWrapper >, -1, 1, true> >; Derived = Eigen::Array]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:19: required from 'Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::ArrayWrapper >, -1, 1, true> >; Derived = Eigen::Array]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Array.h:242:29: required from 'Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Array(const Eigen::EigenBase&, typename Eigen::internal::enable_if >::Scalar>::value, Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::PrivateType>::type) [with OtherDerived = Eigen::ArrayWrapper >, -1, 1, true> >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1; typename Eigen::internal::enable_if >::Scalar>::value, Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::PrivateType>::type = Eigen::Array::PrivateType]' data_manipulation.cpp:136:41: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 989 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator, -1, 1, true> >': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:736:20: required from 'void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, -1, 1, true>; SrcXprType = Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > >; Functor = Eigen::internal::assign_op]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31: required from 'static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, -1, 1, true>; SrcXprType = Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > >; Functor = Eigen::internal::assign_op; Weak = void]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block, -1, 1, true>; Src = Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > >; Func = Eigen::internal::assign_op]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:804:27: required from 'void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename Eigen::internal::enable_if<(! Eigen::internal::evaluator_assume_aliasing::value), void*>::type) [with Dst = Eigen::Block, -1, 1, true>; Src = Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > >; Func = Eigen::internal::assign_op; typename Eigen::internal::enable_if<(! Eigen::internal::evaluator_assume_aliasing::value), void*>::type = void*]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from 'void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Block, -1, 1, true>; Src = Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > >]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Assign.h:66:28: required from 'Derived& Eigen::MatrixBase::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > >; Derived = Eigen::Block, -1, 1, true>]' data_manipulation.cpp:187:51: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator >, 1, -1, false> >': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1338:41: required from 'struct Eigen::internal::evaluator_wrapper_base >, 1, -1, false> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1416:8: required from 'struct Eigen::internal::unary_evaluator >, 1, -1, false> >, Eigen::internal::IndexBased, double>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from 'struct Eigen::internal::evaluator >, 1, -1, false> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:730:20: required from 'void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Transpose >; SrcXprType = Eigen::ArrayWrapper >, 1, -1, false> >; Functor = Eigen::internal::assign_op]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31: required from 'static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Transpose >; SrcXprType = Eigen::ArrayWrapper >, 1, -1, false> >; Functor = Eigen::internal::assign_op; Weak = void]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Array; Src = Eigen::ArrayWrapper >, 1, -1, false> >; Func = Eigen::internal::assign_op]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from 'Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::ArrayWrapper >, 1, -1, false> >; Derived = Eigen::Array]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:19: required from 'Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::ArrayWrapper >, 1, -1, false> >; Derived = Eigen::Array]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Array.h:242:29: required from 'Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Array(const Eigen::EigenBase&, typename Eigen::internal::enable_if >::Scalar>::value, Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::PrivateType>::type) [with OtherDerived = Eigen::ArrayWrapper >, 1, -1, false> >; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1; typename Eigen::internal::enable_if >::Scalar>::value, Eigen::Array<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::PrivateType>::type = Eigen::Array::PrivateType]' data_manipulation.cpp:368:39: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:439, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/RcppEigen/include/RcppEigenForward.h:30, from /usr/lib/R/site-library/RcppEigen/include/RcppEigen.h:25, from data_manipulation.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, -1, 1, true>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:298:80: required from 'struct Eigen::internal::evaluator, -1, 1, true> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseBlock.h:581:8: required from 'struct Eigen::internal::unary_evaluator, -1, 1, true>, Eigen::internal::IteratorBased, double>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1004:8: required from 'struct Eigen::internal::block_evaluator, -1, 1, true, false>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:952:8: required from 'struct Eigen::internal::evaluator, -1, 1, true> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:683:97: required from 'Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::SparseMatrix(const Eigen::SparseMatrixBase&) [with OtherDerived = Eigen::Block, -1, 1, true>; _Scalar = double; int _Options = 0; _StorageIndex = int]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseRef.h:217:9: required from 'void Eigen::Ref, _Options, _StrideType>::construct(const Expression&, Eigen::internal::true_type) [with Expression = Eigen::Block, -1, 1, true>; MatScalar = double; int MatOptions = 0; MatIndex = int; int Options = 0; StrideType = Eigen::OuterStride<>]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseRef.h:190:16: required from 'Eigen::Ref, _Options, _StrideType>::Ref(const Eigen::SparseMatrixBase&) [with Derived = Eigen::Block, -1, 1, true>; MatScalar = double; int MatOptions = 0; MatIndex = int; int Options = 0; StrideType = Eigen::OuterStride<>]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseBlock.h:128:88: required from 'Eigen::internal::sparse_matrix_block_impl::BlockType& Eigen::internal::sparse_matrix_block_impl::operator=(const Eigen::SparseMatrixBase&) [with OtherDerived = Eigen::Block, -1, 1, true>; SparseMatrixType = Eigen::SparseMatrix; int BlockRows = -1; int BlockCols = 1; Eigen::internal::sparse_matrix_block_impl::BlockType = Eigen::Block, -1, 1, true>]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseBlock.h:216:34: required from 'Eigen::internal::sparse_matrix_block_impl::BlockType& Eigen::internal::sparse_matrix_block_impl::operator=(const BlockType&) [with SparseMatrixType = Eigen::SparseMatrix; int BlockRows = -1; int BlockCols = 1; Eigen::internal::sparse_matrix_block_impl::BlockType = Eigen::Block, -1, 1, true>]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:111:5: required from 'Eigen::Block& Eigen::Block::operator=(const Eigen::Block&) [with XprType = Eigen::SparseMatrix; int BlockRows = -1; int BlockCols = 1; bool InnerPanel = true]' data_manipulation.cpp:409:42: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:445, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/RcppEigen/include/RcppEigenForward.h:30, from /usr/lib/R/site-library/RcppEigen/include/RcppEigen.h:25, from data_manipulation.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator, -1, 1, true> >': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:683:97: required from 'Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::SparseMatrix(const Eigen::SparseMatrixBase&) [with OtherDerived = Eigen::Block, -1, 1, true>; _Scalar = double; int _Options = 0; _StorageIndex = int]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseRef.h:217:9: required from 'void Eigen::Ref, _Options, _StrideType>::construct(const Expression&, Eigen::internal::true_type) [with Expression = Eigen::Block, -1, 1, true>; MatScalar = double; int MatOptions = 0; MatIndex = int; int Options = 0; StrideType = Eigen::OuterStride<>]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseRef.h:190:16: required from 'Eigen::Ref, _Options, _StrideType>::Ref(const Eigen::SparseMatrixBase&) [with Derived = Eigen::Block, -1, 1, true>; MatScalar = double; int MatOptions = 0; MatIndex = int; int Options = 0; StrideType = Eigen::OuterStride<>]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseBlock.h:128:88: required from 'Eigen::internal::sparse_matrix_block_impl::BlockType& Eigen::internal::sparse_matrix_block_impl::operator=(const Eigen::SparseMatrixBase&) [with OtherDerived = Eigen::Block, -1, 1, true>; SparseMatrixType = Eigen::SparseMatrix; int BlockRows = -1; int BlockCols = 1; Eigen::internal::sparse_matrix_block_impl::BlockType = Eigen::Block, -1, 1, true>]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseBlock.h:216:34: required from 'Eigen::internal::sparse_matrix_block_impl::BlockType& Eigen::internal::sparse_matrix_block_impl::operator=(const BlockType&) [with SparseMatrixType = Eigen::SparseMatrix; int BlockRows = -1; int BlockCols = 1; Eigen::internal::sparse_matrix_block_impl::BlockType = Eigen::Block, -1, 1, true>]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:111:5: required from 'Eigen::Block& Eigen::Block::operator=(const Eigen::Block&) [with XprType = Eigen::SparseMatrix; int BlockRows = -1; int BlockCols = 1; bool InnerPanel = true]' data_manipulation.cpp:409:42: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 989 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:439, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/RcppEigen/include/RcppEigenForward.h:30, from /usr/lib/R/site-library/RcppEigen/include/RcppEigen.h:25, from data_manipulation.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:131:44: [ skipping 9 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Replicate, Eigen::internal::member_mean, 0>, -1, 1> >; Func = Eigen::internal::assign_op]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:804:27: required from 'void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename Eigen::internal::enable_if<(! Eigen::internal::evaluator_assume_aliasing::value), void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Replicate, Eigen::internal::member_mean, 0>, -1, 1> >; Func = Eigen::internal::assign_op; typename Eigen::internal::enable_if<(! Eigen::internal::evaluator_assume_aliasing::value), void*>::type = void*]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from 'void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Replicate, Eigen::internal::member_mean, 0>, -1, 1> >]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:714:32: required from 'Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Replicate, Eigen::internal::member_mean, 0>, -1, 1> >; Derived = Eigen::Matrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Replicate, Eigen::internal::member_mean, 0>, -1, 1> >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]' data_manipulation.cpp:229:46: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:445, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/RcppEigen/include/RcppEigenForward.h:30, from /usr/lib/R/site-library/RcppEigen/include/RcppEigen.h:25, from data_manipulation.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator, -1, -1, false> >': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:736:20: required from 'void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, -1, -1, false>; SrcXprType = Eigen::Matrix; Functor = Eigen::internal::assign_op]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31: required from 'static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, -1, -1, false>; SrcXprType = Eigen::Matrix; Functor = Eigen::internal::assign_op; Weak = void]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block, -1, -1, false>; Src = Eigen::Matrix; Func = Eigen::internal::assign_op]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:804:27: required from 'void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename Eigen::internal::enable_if<(! Eigen::internal::evaluator_assume_aliasing::value), void*>::type) [with Dst = Eigen::Block, -1, -1, false>; Src = Eigen::Matrix; Func = Eigen::internal::assign_op; typename Eigen::internal::enable_if<(! Eigen::internal::evaluator_assume_aliasing::value), void*>::type = void*]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from 'void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Block, -1, -1, false>; Src = Eigen::Matrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Assign.h:66:28: required from 'Derived& Eigen::MatrixBase::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::Matrix; Derived = Eigen::Block, -1, -1, false>]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CommaInitializer.h:95:64: required from 'Eigen::CommaInitializer& Eigen::CommaInitializer::operator,(const Eigen::DenseBase&) [with OtherDerived = Eigen::Matrix; XprType = Eigen::Matrix]' data_manipulation.cpp:249:17: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 989 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:439, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/RcppEigen/include/RcppEigenForward.h:30, from /usr/lib/R/site-library/RcppEigen/include/RcppEigen.h:25, from data_manipulation.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, Eigen::Matrix, 1>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >, Eigen::Matrix, 1> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >, Eigen::Matrix, 1> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base >, Eigen::Matrix, 1, 8>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl >, Eigen::Matrix, 1, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product >, Eigen::Matrix, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:436:50: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31: required from 'static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix; SrcXprType = Eigen::CwiseBinaryOp, const Eigen::Product >, Eigen::Matrix, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >; Functor = Eigen::internal::assign_op; Weak = void]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Product >, Eigen::Matrix, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >; Func = Eigen::internal::assign_op]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from 'Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Product >, Eigen::Matrix, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >; Derived = Eigen::Matrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:19: required from 'Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Product >, Eigen::Matrix, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >; Derived = Eigen::Matrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Product >, Eigen::Matrix, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]' data_manipulation.cpp:231:70: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::Matrix >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::Matrix > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, Eigen::Matrix > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from 'class Eigen::CwiseNullaryOp, Eigen::Matrix >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:327:30: required from 'Derived& Eigen::DenseBase::setConstant(const Scalar&) [with Derived = Eigen::Matrix; Eigen::DenseBase::Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:501:10: required from 'Derived& Eigen::DenseBase::setZero() [with Derived = Eigen::Matrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:436:18: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31: required from 'static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix; SrcXprType = Eigen::CwiseBinaryOp, const Eigen::Product >, Eigen::Matrix, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >; Functor = Eigen::internal::assign_op; Weak = void]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Product >, Eigen::Matrix, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >; Func = Eigen::internal::assign_op]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from 'Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Product >, Eigen::Matrix, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >; Derived = Eigen::Matrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:19: required from 'Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Product >, Eigen::Matrix, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >; Derived = Eigen::Matrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Product >, Eigen::Matrix, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]' data_manipulation.cpp:231:70: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:496, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/RcppEigen/include/RcppEigenForward.h:30, from /usr/lib/R/site-library/RcppEigen/include/RcppEigen.h:25, from data_manipulation.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h: In instantiation of 'class Eigen::internal::gebp_traits': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:106:40: required from 'void Eigen::internal::evaluateProductBlockingSizesHeuristic(Index&, Index&, Index&, Index) [with LhsScalar = double; RhsScalar = double; int KcFactor = 1; Index = long int]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:301:81: required from 'void Eigen::internal::computeProductBlockingSizes(Index&, Index&, Index&, Index) [with LhsScalar = double; RhsScalar = double; int KcFactor = 1; Index = long int]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:353:66: required from 'Eigen::internal::gemm_blocking_space::gemm_blocking_space(Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index, bool) [with int StorageOrder = 0; _LhsScalar = double; _RhsScalar = double; int MaxRows = -1; int MaxCols = -1; int MaxDepth = -1; int KcFactor = 1; Eigen::Index = long int]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:485:18: required from 'static void Eigen::internal::generic_product_impl::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Matrix; Lhs = Eigen::Transpose >; Rhs = Eigen::Matrix; Eigen::internal::generic_product_impl::Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:437:20: required from 'static void Eigen::internal::generic_product_impl::evalTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Matrix; Lhs = Eigen::Transpose >; Rhs = Eigen::Matrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:124:75: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31: required from 'static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix; SrcXprType = Eigen::CwiseBinaryOp, const Eigen::Product >, Eigen::Matrix, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >; Functor = Eigen::internal::assign_op; Weak = void]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Product >, Eigen::Matrix, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >; Func = Eigen::internal::assign_op]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from 'Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Product >, Eigen::Matrix, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >; Derived = Eigen::Matrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:19: required from 'Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Product >, Eigen::Matrix, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >; Derived = Eigen::Matrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Product >, Eigen::Matrix, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]' data_manipulation.cpp:231:70: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:391:73: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 391 | typedef typename conditional::type LhsPacket; | ^~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:392:73: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 392 | typedef typename conditional::type RhsPacket; | ^~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:393:73: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 393 | typedef typename conditional::type ResPacket; | ^~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h: In instantiation of 'void Eigen::internal::gemm_pack_lhs::operator()(Scalar*, const DataMapper&, Index, Index, Index, Index) [with Scalar = double; Index = long int; DataMapper = Eigen::internal::const_blas_data_mapper; int Pack1 = 4; int Pack2 = 2; bool Conjugate = false; bool PanelMode = false]': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:182:17: required from 'static void Eigen::internal::general_matrix_matrix_product::run(Index, Index, Index, const LhsScalar*, Index, const RhsScalar*, Index, Eigen::internal::general_matrix_matrix_product::ResScalar*, Index, Index, Eigen::internal::general_matrix_matrix_product::ResScalar, Eigen::internal::level3_blocking&, Eigen::internal::GemmParallelInfo*) [with Index = long int; LhsScalar = double; int LhsStorageOrder = 1; bool ConjugateLhs = false; RhsScalar = double; int RhsStorageOrder = 0; bool ConjugateRhs = false; int ResInnerStride = 1; Eigen::internal::general_matrix_matrix_product::ResScalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:228:14: required from 'void Eigen::internal::gemm_functor::operator()(Index, Index, Index, Index, Eigen::internal::GemmParallelInfo*) const [with Scalar = double; Index = long int; Gemm = Eigen::internal::general_matrix_matrix_product; Lhs = Eigen::Transpose >; Rhs = Eigen::Matrix; Dest = Eigen::Matrix; BlockingType = Eigen::internal::gemm_blocking_space<0, double, double, -1, -1, -1, 1, false>]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/Parallelizer.h:98:7: required from 'void Eigen::internal::parallelize_gemm(const Functor&, Index, Index, Index, bool) [with bool Condition = true; Functor = Eigen::internal::gemm_functor, Eigen::Transpose >, Eigen::Matrix, Eigen::Matrix, Eigen::internal::gemm_blocking_space<0, double, double, -1, -1, -1, 1, false> >; Index = long int]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:487:9: required from 'static void Eigen::internal::generic_product_impl::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Matrix; Lhs = Eigen::Transpose >; Rhs = Eigen::Matrix; Eigen::internal::generic_product_impl::Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:437:20: required from 'static void Eigen::internal::generic_product_impl::evalTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Matrix; Lhs = Eigen::Transpose >; Rhs = Eigen::Matrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:124:75: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31: required from 'static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix; SrcXprType = Eigen::CwiseBinaryOp, const Eigen::Product >, Eigen::Matrix, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >; Functor = Eigen::internal::assign_op; Weak = void]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Product >, Eigen::Matrix, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >; Func = Eigen::internal::assign_op]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from 'Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Product >, Eigen::Matrix, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >; Derived = Eigen::Matrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:19: required from 'Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Product >, Eigen::Matrix, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >; Derived = Eigen::Matrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Product >, Eigen::Matrix, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]' data_manipulation.cpp:231:70: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1847:33: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 1847 | PacketBlock kernel; | ^~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1847:33: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h: In instantiation of 'void Eigen::internal::gemm_pack_rhs::operator()(Scalar*, const DataMapper&, Index, Index, Index, Index) [with Scalar = double; Index = long int; DataMapper = Eigen::internal::const_blas_data_mapper; int nr = 4; bool Conjugate = false; bool PanelMode = false]': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:193:21: required from 'static void Eigen::internal::general_matrix_matrix_product::run(Index, Index, Index, const LhsScalar*, Index, const RhsScalar*, Index, Eigen::internal::general_matrix_matrix_product::ResScalar*, Index, Index, Eigen::internal::general_matrix_matrix_product::ResScalar, Eigen::internal::level3_blocking&, Eigen::internal::GemmParallelInfo*) [with Index = long int; LhsScalar = double; int LhsStorageOrder = 1; bool ConjugateLhs = false; RhsScalar = double; int RhsStorageOrder = 0; bool ConjugateRhs = false; int ResInnerStride = 1; Eigen::internal::general_matrix_matrix_product::ResScalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:228:14: required from 'void Eigen::internal::gemm_functor::operator()(Index, Index, Index, Index, Eigen::internal::GemmParallelInfo*) const [with Scalar = double; Index = long int; Gemm = Eigen::internal::general_matrix_matrix_product; Lhs = Eigen::Transpose >; Rhs = Eigen::Matrix; Dest = Eigen::Matrix; BlockingType = Eigen::internal::gemm_blocking_space<0, double, double, -1, -1, -1, 1, false>]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/Parallelizer.h:98:7: required from 'void Eigen::internal::parallelize_gemm(const Functor&, Index, Index, Index, bool) [with bool Condition = true; Functor = Eigen::internal::gemm_functor, Eigen::Transpose >, Eigen::Matrix, Eigen::Matrix, Eigen::internal::gemm_blocking_space<0, double, double, -1, -1, -1, 1, false> >; Index = long int]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:487:9: required from 'static void Eigen::internal::generic_product_impl::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Matrix; Lhs = Eigen::Transpose >; Rhs = Eigen::Matrix; Eigen::internal::generic_product_impl::Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:437:20: required from 'static void Eigen::internal::generic_product_impl::evalTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Matrix; Lhs = Eigen::Transpose >; Rhs = Eigen::Matrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:124:75: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31: required from 'static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix; SrcXprType = Eigen::CwiseBinaryOp, const Eigen::Product >, Eigen::Matrix, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >; Functor = Eigen::internal::assign_op; Weak = void]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Product >, Eigen::Matrix, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >; Func = Eigen::internal::assign_op]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from 'Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Product >, Eigen::Matrix, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >; Derived = Eigen::Matrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:19: required from 'Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Product >, Eigen::Matrix, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >; Derived = Eigen::Matrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Product >, Eigen::Matrix, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]' data_manipulation.cpp:231:70: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1981:62: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 1981 | PacketBlock kernel; | ^~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h: In instantiation of 'void Eigen::internal::gebp_kernel::operator()(const DataMapper&, const LhsScalar*, const RhsScalar*, Index, Index, Index, Eigen::internal::gebp_kernel::ResScalar, Index, Index, Index, Index) [with LhsScalar = double; RhsScalar = double; Index = long int; DataMapper = Eigen::internal::blas_data_mapper; int mr = 4; int nr = 4; bool ConjugateLhs = false; bool ConjugateRhs = false; Eigen::internal::gebp_kernel::ResScalar = double]': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:196:15: required from 'static void Eigen::internal::general_matrix_matrix_product::run(Index, Index, Index, const LhsScalar*, Index, const RhsScalar*, Index, Eigen::internal::general_matrix_matrix_product::ResScalar*, Index, Index, Eigen::internal::general_matrix_matrix_product::ResScalar, Eigen::internal::level3_blocking&, Eigen::internal::GemmParallelInfo*) [with Index = long int; LhsScalar = double; int LhsStorageOrder = 1; bool ConjugateLhs = false; RhsScalar = double; int RhsStorageOrder = 0; bool ConjugateRhs = false; int ResInnerStride = 1; Eigen::internal::general_matrix_matrix_product::ResScalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:228:14: required from 'void Eigen::internal::gemm_functor::operator()(Index, Index, Index, Index, Eigen::internal::GemmParallelInfo*) const [with Scalar = double; Index = long int; Gemm = Eigen::internal::general_matrix_matrix_product; Lhs = Eigen::Transpose >; Rhs = Eigen::Matrix; Dest = Eigen::Matrix; BlockingType = Eigen::internal::gemm_blocking_space<0, double, double, -1, -1, -1, 1, false>]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/Parallelizer.h:98:7: required from 'void Eigen::internal::parallelize_gemm(const Functor&, Index, Index, Index, bool) [with bool Condition = true; Functor = Eigen::internal::gemm_functor, Eigen::Transpose >, Eigen::Matrix, Eigen::Matrix, Eigen::internal::gemm_blocking_space<0, double, double, -1, -1, -1, 1, false> >; Index = long int]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:487:9: required from 'static void Eigen::internal::generic_product_impl::scaleAndAddTo(Dest&, const Lhs&, const Rhs&, const Scalar&) [with Dest = Eigen::Matrix; Lhs = Eigen::Transpose >; Rhs = Eigen::Matrix; Eigen::internal::generic_product_impl::Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralMatrixMatrix.h:437:20: required from 'static void Eigen::internal::generic_product_impl::evalTo(Dst&, const Lhs&, const Rhs&) [with Dst = Eigen::Matrix; Lhs = Eigen::Transpose >; Rhs = Eigen::Matrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:124:75: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31: required from 'static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix; SrcXprType = Eigen::CwiseBinaryOp, const Eigen::Product >, Eigen::Matrix, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >; Functor = Eigen::internal::assign_op; Weak = void]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Product >, Eigen::Matrix, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >; Func = Eigen::internal::assign_op]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from 'Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Product >, Eigen::Matrix, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >; Derived = Eigen::Matrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:19: required from 'Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Product >, Eigen::Matrix, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >; Derived = Eigen::Matrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Product >, Eigen::Matrix, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]' data_manipulation.cpp:231:70: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1537:103: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__m128d'} [-Wignored-attributes] 1537 | const int SResPacketHalfSize = unpacket_traits::half>::size; | ^~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1592:135: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__m128d'} [-Wignored-attributes] 1592 | typedef typename conditional=8,typename unpacket_traits::half,SResPacket>::type SResPacketHalf; | ^~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1593:135: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__m128d'} [-Wignored-attributes] 1593 | typedef typename conditional=8,typename unpacket_traits::half,SLhsPacket>::type SLhsPacketHalf; | ^~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1594:135: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__m128d'} [-Wignored-attributes] 1594 | typedef typename conditional=8,typename unpacket_traits::half,SRhsPacket>::type SRhsPacketHalf; | ^~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/products/GeneralBlockPanelKernel.h:1595:135: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__m128d'} [-Wignored-attributes] 1595 | typedef typename conditional=8,typename unpacket_traits::half,SAccPacket>::type SAccPacketHalf; | ^~~~~~~~~~~~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:439, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/RcppEigen/include/RcppEigenForward.h:30, from /usr/lib/R/site-library/RcppEigen/include/RcppEigen.h:25, from data_manipulation.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, 1, -1, true>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from 'class Eigen::DenseCoeffsBase >, 1, -1, true>, 2>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >, 1, -1, true> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >, 1, -1, true> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase >, 1, -1, true>, 0>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from 'class Eigen::internal::BlockImpl_dense >, 1, -1, true, true>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 17 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31: required from 'static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix; SrcXprType = Eigen::CwiseBinaryOp, const Eigen::Product >, Eigen::Matrix, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >; Functor = Eigen::internal::assign_op; Weak = void]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Product >, Eigen::Matrix, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >; Func = Eigen::internal::assign_op]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from 'Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Product >, Eigen::Matrix, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >; Derived = Eigen::Matrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:19: required from 'Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Product >, Eigen::Matrix, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >; Derived = Eigen::Matrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Product >, Eigen::Matrix, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]' data_manipulation.cpp:231:70: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, 1, -1, true> >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from 'class Eigen::DenseCoeffsBase >, 1, -1, true> >, 2>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >, 1, -1, true> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >, 1, -1, true> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from 'class Eigen::TransposeImpl >, 1, -1, true>, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from 'class Eigen::Transpose >, 1, -1, true> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:578:37: [ skipping 15 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31: required from 'static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix; SrcXprType = Eigen::CwiseBinaryOp, const Eigen::Product >, Eigen::Matrix, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >; Functor = Eigen::internal::assign_op; Weak = void]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Product >, Eigen::Matrix, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >; Func = Eigen::internal::assign_op]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from 'Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Product >, Eigen::Matrix, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >; Derived = Eigen::Matrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:19: required from 'Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Product >, Eigen::Matrix, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >; Derived = Eigen::Matrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Product >, Eigen::Matrix, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]' data_manipulation.cpp:231:70: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, -1, 1, true>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from 'class Eigen::DenseCoeffsBase, -1, 1, true>, 2>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, -1, 1, true> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, -1, 1, true> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, -1, 1, true>, 0>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from 'class Eigen::internal::BlockImpl_dense, -1, 1, true, true>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 17 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31: required from 'static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix; SrcXprType = Eigen::CwiseBinaryOp, const Eigen::Product >, Eigen::Matrix, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >; Functor = Eigen::internal::assign_op; Weak = void]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Product >, Eigen::Matrix, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >; Func = Eigen::internal::assign_op]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from 'Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Product >, Eigen::Matrix, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >; Derived = Eigen::Matrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:19: required from 'Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Product >, Eigen::Matrix, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >; Derived = Eigen::Matrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Product >, Eigen::Matrix, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]' data_manipulation.cpp:231:70: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Transpose >, 1, -1, true> >, const Eigen::Block, -1, 1, true> >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Transpose >, 1, -1, true> >, const Eigen::Block, -1, 1, true> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Transpose >, 1, -1, true> >, const Eigen::Block, -1, 1, true> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::Transpose >, 1, -1, true> >, const Eigen::Block, -1, 1, true>, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::Transpose >, 1, -1, true> >, const Eigen::Block, -1, 1, true> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:578:52: required from 'const CoeffReturnType Eigen::internal::product_evaluator, ProductTag, Eigen::DenseShape, Eigen::DenseShape>::coeff(Eigen::Index, Eigen::Index) const [with Lhs = Eigen::Transpose >; Rhs = Eigen::Matrix; int ProductTag = 8; typename Eigen::internal::traits::Rhs>::Scalar = double; typename Eigen::internal::traits::Lhs>::Scalar = double; Eigen::internal::product_evaluator, ProductTag, Eigen::DenseShape, Eigen::DenseShape>::CoeffReturnType = double; Eigen::Index = long int]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:631:63: [ skipping 14 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31: required from 'static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix; SrcXprType = Eigen::CwiseBinaryOp, const Eigen::Product >, Eigen::Matrix, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >; Functor = Eigen::internal::assign_op; Weak = void]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Product >, Eigen::Matrix, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >; Func = Eigen::internal::assign_op]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from 'Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Product >, Eigen::Matrix, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >; Derived = Eigen::Matrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:19: required from 'Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Product >, Eigen::Matrix, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >; Derived = Eigen::Matrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Product >, Eigen::Matrix, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]' data_manipulation.cpp:231:70: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 1, -1, false>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from 'class Eigen::DenseCoeffsBase, 1, -1, false>, 2>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 1, -1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 1, -1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, 1, -1, false>, 0>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from 'class Eigen::internal::BlockImpl_dense, 1, -1, false, true>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 18 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Replicate, Eigen::internal::member_mean, 0>, -1, 1> >; Func = Eigen::internal::assign_op]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:804:27: required from 'void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename Eigen::internal::enable_if<(! Eigen::internal::evaluator_assume_aliasing::value), void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Replicate, Eigen::internal::member_mean, 0>, -1, 1> >; Func = Eigen::internal::assign_op; typename Eigen::internal::enable_if<(! Eigen::internal::evaluator_assume_aliasing::value), void*>::type = void*]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from 'void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Replicate, Eigen::internal::member_mean, 0>, -1, 1> >]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:714:32: required from 'Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Replicate, Eigen::internal::member_mean, 0>, -1, 1> >; Derived = Eigen::Matrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Replicate, Eigen::internal::member_mean, 0>, -1, 1> >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]' data_manipulation.cpp:229:46: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:445, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/RcppEigen/include/RcppEigenForward.h:30, from /usr/lib/R/site-library/RcppEigen/include/RcppEigen.h:25, from data_manipulation.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator >, 1, -1, true> >': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from 'struct Eigen::internal::evaluator >, 1, -1, true> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:270:41: required from 'struct Eigen::internal::unary_evaluator >, 1, -1, true> >, Eigen::internal::IndexBased, double>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:90:8: required from 'struct Eigen::internal::evaluator >, 1, -1, true> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from 'struct Eigen::internal::evaluator >, 1, -1, true> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:681:37: required from 'struct Eigen::internal::binary_evaluator, const Eigen::Transpose >, 1, -1, true> >, const Eigen::Block, -1, 1, true> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:665:8: [ skipping 19 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31: required from 'static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix; SrcXprType = Eigen::CwiseBinaryOp, const Eigen::Product >, Eigen::Matrix, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >; Functor = Eigen::internal::assign_op; Weak = void]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Product >, Eigen::Matrix, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >; Func = Eigen::internal::assign_op]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from 'Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Product >, Eigen::Matrix, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >; Derived = Eigen::Matrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:19: required from 'Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Product >, Eigen::Matrix, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >; Derived = Eigen::Matrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Product >, Eigen::Matrix, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]' data_manipulation.cpp:231:70: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 989 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator, -1, 1, true> >': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from 'struct Eigen::internal::evaluator, -1, 1, true> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:681:69: required from 'struct Eigen::internal::binary_evaluator, const Eigen::Transpose >, 1, -1, true> >, const Eigen::Block, -1, 1, true> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:665:8: required from 'struct Eigen::internal::evaluator, const Eigen::Transpose >, 1, -1, true> >, const Eigen::Block, -1, 1, true> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:349:33: required from 'class Eigen::internal::redux_evaluator, const Eigen::Transpose >, 1, -1, true> >, const Eigen::Block, -1, 1, true> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:416:17: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseBinaryOp, const Eigen::Transpose >, 1, -1, true> >, const Eigen::Block, -1, 1, true> >; typename Eigen::internal::traits::Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:453:25: [ skipping 16 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31: required from 'static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix; SrcXprType = Eigen::CwiseBinaryOp, const Eigen::Product >, Eigen::Matrix, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >; Functor = Eigen::internal::assign_op; Weak = void]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Product >, Eigen::Matrix, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >; Func = Eigen::internal::assign_op]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from 'Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Product >, Eigen::Matrix, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >; Derived = Eigen::Matrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:19: required from 'Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Product >, Eigen::Matrix, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >; Derived = Eigen::Matrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Product >, Eigen::Matrix, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]' data_manipulation.cpp:231:70: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator, 1, -1, false> >': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:349:33: required from 'class Eigen::internal::redux_evaluator, 1, -1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:416:17: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::Block, 1, -1, false>; typename Eigen::internal::traits::Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:468:32: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::mean() const [with Derived = Eigen::Block, 1, -1, false>; typename Eigen::internal::traits::Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/VectorwiseOp.h:105:1: required from 'ResultType Eigen::internal::member_mean::operator()(const XprType&) const [with XprType = Eigen::Block, 1, -1, false>; ResultType = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1318:23: required from 'const Scalar Eigen::internal::evaluator >::coeff(Eigen::Index) const [with ArgType = Eigen::Matrix; MemberOp = Eigen::internal::member_mean; int Direction = 0; Eigen::internal::evaluator >::Scalar = double; Eigen::Index = long int]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:637:61: [ skipping 15 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Replicate, Eigen::internal::member_mean, 0>, -1, 1> >; Func = Eigen::internal::assign_op]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:804:27: required from 'void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename Eigen::internal::enable_if<(! Eigen::internal::evaluator_assume_aliasing::value), void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Replicate, Eigen::internal::member_mean, 0>, -1, 1> >; Func = Eigen::internal::assign_op; typename Eigen::internal::enable_if<(! Eigen::internal::evaluator_assume_aliasing::value), void*>::type = void*]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from 'void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Replicate, Eigen::internal::member_mean, 0>, -1, 1> >]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:714:32: required from 'Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Replicate, Eigen::internal::member_mean, 0>, -1, 1> >; Derived = Eigen::Matrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Replicate, Eigen::internal::member_mean, 0>, -1, 1> >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]' data_manipulation.cpp:229:46: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:439, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/RcppEigen/include/RcppEigenForward.h:30, from /usr/lib/R/site-library/RcppEigen/include/RcppEigen.h:25, from data_manipulation.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase&) [with Derived = Eigen::CwiseBinaryOp, const Eigen::Transpose >, 1, -1, true> >, const Eigen::Block, -1, 1, true> >; Eigen::Index = long int]': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:225:63: required from 'static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Derived&, const Func&) [with Func = Eigen::internal::scalar_sum_op; Derived = Eigen::internal::redux_evaluator, const Eigen::Transpose >, 1, -1, true> >, const Eigen::Block, -1, 1, true> > >; Eigen::internal::redux_impl::Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseBinaryOp, const Eigen::Transpose >, 1, -1, true> >, const Eigen::Block, -1, 1, true> >; typename Eigen::internal::traits::Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:453:25: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::CwiseBinaryOp, const Eigen::Transpose >, 1, -1, true> >, const Eigen::Block, -1, 1, true> >; typename Eigen::internal::traits::Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:578:75: required from 'const CoeffReturnType Eigen::internal::product_evaluator, ProductTag, Eigen::DenseShape, Eigen::DenseShape>::coeff(Eigen::Index, Eigen::Index) const [with Lhs = Eigen::Transpose >; Rhs = Eigen::Matrix; int ProductTag = 8; typename Eigen::internal::traits::Rhs>::Scalar = double; typename Eigen::internal::traits::Lhs>::Scalar = double; Eigen::internal::product_evaluator, ProductTag, Eigen::DenseShape, Eigen::DenseShape>::CoeffReturnType = double; Eigen::Index = long int]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:631:63: required from 'void Eigen::internal::generic_dense_assignment_kernel::assignCoeff(Eigen::Index, Eigen::Index) [with DstEvaluatorTypeT = Eigen::internal::evaluator >; SrcEvaluatorTypeT = Eigen::internal::evaluator >, Eigen::Matrix, 1> >; Functor = Eigen::internal::assign_op; int Version = 0; Eigen::Index = long int]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:645:16: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31: required from 'static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix; SrcXprType = Eigen::CwiseBinaryOp, const Eigen::Product >, Eigen::Matrix, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >; Functor = Eigen::internal::assign_op; Weak = void]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Product >, Eigen::Matrix, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >; Func = Eigen::internal::assign_op]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from 'Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Product >, Eigen::Matrix, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >; Derived = Eigen::Matrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:19: required from 'Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Product >, Eigen::Matrix, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >; Derived = Eigen::Matrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Product >, Eigen::Matrix, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]' data_manipulation.cpp:231:70: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:650:74: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 650 | return internal::first_aligned::alignment),Derived>(m); | ^~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase&) [with Derived = Eigen::Block, -1, 1, true>; Eigen::Index = long int]': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:225:63: required from 'static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Derived&, const Func&) [with Func = Eigen::internal::scalar_sum_op; Derived = Eigen::internal::redux_evaluator, -1, 1, true> >; Eigen::internal::redux_impl::Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::Block, -1, 1, true>; typename Eigen::internal::traits::Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:468:32: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::mean() const [with Derived = Eigen::Block, -1, 1, true>; typename Eigen::internal::traits::Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/VectorwiseOp.h:105:1: required from 'ResultType Eigen::internal::member_mean::operator()(const XprType&) const [with XprType = Eigen::Block, -1, 1, true>; ResultType = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1316:23: required from 'const Scalar Eigen::internal::evaluator >::coeff(Eigen::Index) const [with ArgType = Eigen::Matrix; MemberOp = Eigen::internal::member_mean; int Direction = 0; Eigen::internal::evaluator >::Scalar = double; Eigen::Index = long int]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:637:61: [ skipping 15 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Replicate, Eigen::internal::member_mean, 0>, -1, 1> >; Func = Eigen::internal::assign_op]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:804:27: required from 'void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename Eigen::internal::enable_if<(! Eigen::internal::evaluator_assume_aliasing::value), void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Replicate, Eigen::internal::member_mean, 0>, -1, 1> >; Func = Eigen::internal::assign_op; typename Eigen::internal::enable_if<(! Eigen::internal::evaluator_assume_aliasing::value), void*>::type = void*]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:782:18: required from 'void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Replicate, Eigen::internal::member_mean, 0>, -1, 1> >]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:714:32: required from 'Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Replicate, Eigen::internal::member_mean, 0>, -1, 1> >; Derived = Eigen::Matrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Replicate, Eigen::internal::member_mean, 0>, -1, 1> >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 0; int _MaxRows = -1; int _MaxCols = -1]' data_manipulation.cpp:229:46: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:650:74: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -I'/usr/lib/R/site-library/RcppEigen/include' -I'/usr/lib/R/site-library/RcppProgress/include' -fpic -g -O2 -ffile-prefix-map=/build/r-base-XqSJAD/r-base-4.0.4=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c fast_NN_dist.cpp -o fast_NN_dist.o g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -I'/usr/lib/R/site-library/RcppEigen/include' -I'/usr/lib/R/site-library/RcppProgress/include' -fpic -g -O2 -ffile-prefix-map=/build/r-base-XqSJAD/r-base-4.0.4=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c integration.cpp -o integration.o In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:397, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/RcppEigen/include/RcppEigenForward.h:30, from /usr/lib/R/site-library/RcppEigen/include/RcppEigen.h:25, from integration.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:60:39: warning: ignoring attributes on template argument '__m128' [-Wignored-attributes] 60 | template<> struct is_arithmetic<__m128> { enum { value = true }; }; | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:61:40: warning: ignoring attributes on template argument '__m128i' [-Wignored-attributes] 61 | template<> struct is_arithmetic<__m128i> { enum { value = true }; }; | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:62:40: warning: ignoring attributes on template argument '__m128d' [-Wignored-attributes] 62 | template<> struct is_arithmetic<__m128d> { enum { value = true }; }; | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:161:43: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__m128'} [-Wignored-attributes] 161 | template<> struct unpacket_traits { typedef float type; enum {size=4, alignment=Aligned16}; typedef Packet4f half; }; | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:162:43: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__m128d'} [-Wignored-attributes] 162 | template<> struct unpacket_traits { typedef double type; enum {size=2, alignment=Aligned16}; typedef Packet2d half; }; | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:163:43: warning: ignoring attributes on template argument 'Eigen::internal::Packet4i' {aka '__m128i'} [-Wignored-attributes] 163 | template<> struct unpacket_traits { typedef int type; enum {size=4, alignment=Aligned16}; typedef Packet4i half; }; | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:718:35: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__m128'} [-Wignored-attributes] 718 | struct palign_impl | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:741:35: warning: ignoring attributes on template argument 'Eigen::internal::Packet4i' {aka '__m128i'} [-Wignored-attributes] 741 | struct palign_impl | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:764:35: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__m128d'} [-Wignored-attributes] 764 | struct palign_impl | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:778:34: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__m128'} [-Wignored-attributes] 778 | ptranspose(PacketBlock& kernel) { | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:783:34: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__m128d'} [-Wignored-attributes] 783 | ptranspose(PacketBlock& kernel) { | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:790:34: warning: ignoring attributes on template argument 'Eigen::internal::Packet4i' {aka '__m128i'} [-Wignored-attributes] 790 | ptranspose(PacketBlock& kernel) { | ^ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:377, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/RcppEigen/include/RcppEigenForward.h:30, from /usr/lib/R/site-library/RcppEigen/include/RcppEigen.h:25, from integration.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:15:70: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__m128'} [-Wignored-attributes] 15 | template<> struct conj_helper { \ | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:232:1: note: in expansion of macro 'EIGEN_MAKE_CONJ_HELPER_CPLX_REAL' 232 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:22:70: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__m128'} [-Wignored-attributes] 22 | template<> struct conj_helper { \ | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:232:1: note: in expansion of macro 'EIGEN_MAKE_CONJ_HELPER_CPLX_REAL' 232 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:15:70: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__m128d'} [-Wignored-attributes] 15 | template<> struct conj_helper { \ | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:417:1: note: in expansion of macro 'EIGEN_MAKE_CONJ_HELPER_CPLX_REAL' 417 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:22:70: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__m128d'} [-Wignored-attributes] 22 | template<> struct conj_helper { \ | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:417:1: note: in expansion of macro 'EIGEN_MAKE_CONJ_HELPER_CPLX_REAL' 417 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:370, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/RcppEigen/include/RcppEigenForward.h:30, from /usr/lib/R/site-library/RcppEigen/include/RcppEigen.h:25, from integration.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of 'struct Eigen::internal::find_best_packet': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from 'struct Eigen::internal::traits >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:243:49: required from 'struct Eigen::internal::traits >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:24:46: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(4) float>::half' {aka '__m128'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128'} [-Wignored-attributes] 205 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:439, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/RcppEigen/include/RcppEigenForward.h:30, from /usr/lib/R/site-library/RcppEigen/include/RcppEigen.h:25, from integration.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from 'class Eigen::QuaternionBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:250:7: required from 'class Eigen::Quaternion' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:27:3: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:370, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/RcppEigen/include/RcppEigenForward.h:30, from /usr/lib/R/site-library/RcppEigen/include/RcppEigen.h:25, from integration.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of 'struct Eigen::internal::find_best_packet': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from 'struct Eigen::internal::traits >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:243:49: required from 'struct Eigen::internal::traits >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:88:47: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 205 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:439, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/RcppEigen/include/RcppEigenForward.h:30, from /usr/lib/R/site-library/RcppEigen/include/RcppEigen.h:25, from integration.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from 'class Eigen::QuaternionBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:250:7: required from 'class Eigen::Quaternion' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:92:3: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/SparseCore:37, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Sparse:26, from /usr/lib/R/site-library/RcppEigen/include/RcppEigenForward.h:31, from /usr/lib/R/site-library/RcppEigen/include/RcppEigen.h:25, from integration.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of 'class Eigen::SparseMatrixBase >': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from 'class Eigen::SparseCompressedBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7: required from 'class Eigen::SparseMatrix' /usr/lib/R/site-library/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/ConstrainedConjGrad.h:61:25: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:370, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/RcppEigen/include/RcppEigenForward.h:30, from /usr/lib/R/site-library/RcppEigen/include/RcppEigen.h:25, from integration.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of 'struct Eigen::internal::find_best_packet': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from 'struct Eigen::internal::traits >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' /usr/lib/R/site-library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:168:29: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) long long int>::half' {aka '__m128i'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] 205 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:439, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/RcppEigen/include/RcppEigenForward.h:30, from /usr/lib/R/site-library/RcppEigen/include/RcppEigen.h:25, from integration.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' /usr/lib/R/site-library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:168:29: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase >, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase >, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from 'class Eigen::TransposeImpl, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from 'class Eigen::Transpose >' /usr/lib/R/site-library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:178:72: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' /usr/lib/R/site-library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:179:36: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:370, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/RcppEigen/include/RcppEigenForward.h:30, from /usr/lib/R/site-library/RcppEigen/include/RcppEigen.h:25, from integration.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of 'struct Eigen::internal::find_best_packet': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from 'struct Eigen::internal::traits >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' integration.cpp:23:1: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 205 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:439, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/RcppEigen/include/RcppEigenForward.h:30, from /usr/lib/R/site-library/RcppEigen/include/RcppEigen.h:25, from integration.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' integration.cpp:23:1: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' integration.cpp:23:1: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 1, -1, false>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1, -1, false>, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 1, -1, false>, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 1, -1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 1, -1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, 1, -1, false>, 0>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: required from 'class Eigen::MapBase, 1, -1, false>, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from 'class Eigen::internal::BlockImpl_dense, 1, -1, false, true>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: required from 'class Eigen::BlockImpl, 1, -1, false, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from 'class Eigen::Block, 1, -1, false>' integration.cpp:43:46: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/SparseCore:37, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Sparse:26, from /usr/lib/R/site-library/RcppEigen/include/RcppEigenForward.h:31, from /usr/lib/R/site-library/RcppEigen/include/RcppEigen.h:25, from integration.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of 'class Eigen::SparseMatrixBase > >': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from 'class Eigen::SparseCompressedBase > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseTranspose.h:22:9: required from 'class Eigen::internal::SparseTransposeImpl, 1024>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseTranspose.h:45:37: required from 'class Eigen::TransposeImpl, Eigen::Sparse>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from 'class Eigen::Transpose >' integration.cpp:60:54: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:439, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/RcppEigen/include/RcppEigenForward.h:30, from /usr/lib/R/site-library/RcppEigen/include/RcppEigen.h:25, from integration.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::Matrix >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::Matrix > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, Eigen::Matrix > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from 'class Eigen::CwiseNullaryOp, Eigen::Matrix >' integration.cpp:60:99: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, Eigen::CwiseNullaryOp, Eigen::Matrix >, 0>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >, Eigen::CwiseNullaryOp, Eigen::Matrix >, 0> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >, Eigen::CwiseNullaryOp, Eigen::Matrix >, 0> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:115:7: required from 'class Eigen::internal::dense_product_base >, Eigen::CwiseNullaryOp, Eigen::Matrix >, 0, 7>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:147:7: required from 'class Eigen::ProductImpl >, Eigen::CwiseNullaryOp, Eigen::Matrix >, 0, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product >, Eigen::CwiseNullaryOp, Eigen::Matrix >, 0>' integration.cpp:60:99: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::Matrix >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::Matrix > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, Eigen::Matrix > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from 'class Eigen::CwiseNullaryOp, Eigen::Matrix >' integration.cpp:68:121: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::internal::member_sum, 0>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::internal::member_sum, 0> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, Eigen::internal::member_sum, 0> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/VectorwiseOp.h:56:7: required from 'class Eigen::PartialReduxExpr, Eigen::internal::member_sum, 0>' integration.cpp:77:58: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/SparseCore:37, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Sparse:26, from /usr/lib/R/site-library/RcppEigen/include/RcppEigenForward.h:31, from /usr/lib/R/site-library/RcppEigen/include/RcppEigen.h:25, from integration.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of 'class Eigen::SparseMatrixBase > >': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseView.h:45:7: required from 'class Eigen::SparseView >' integration.cpp:83:42: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of 'class Eigen::SparseMatrixBase >, Eigen::SparseMatrix, 2> >': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:140:7: required from 'class Eigen::ProductImpl >, Eigen::SparseMatrix, 2, Eigen::Sparse>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product >, Eigen::SparseMatrix, 2>' integration.cpp:94:85: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of 'class Eigen::SparseMatrixBase, const Eigen::SparseMatrix, const Eigen::Product >, Eigen::SparseMatrix, 2> > >': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseCwiseBinaryOp.h:36:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::SparseMatrix, const Eigen::Product >, Eigen::SparseMatrix, 2>, Eigen::Sparse>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::SparseMatrix, const Eigen::Product >, Eigen::SparseMatrix, 2> >' integration.cpp:94:85: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:439, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/RcppEigen/include/RcppEigenForward.h:30, from /usr/lib/R/site-library/RcppEigen/include/RcppEigen.h:25, from integration.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, -1, 1, true>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, -1, 1, true>, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, -1, 1, true>, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, -1, 1, true> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, -1, 1, true> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, -1, 1, true>, 0>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: required from 'class Eigen::MapBase, -1, 1, true>, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from 'class Eigen::internal::BlockImpl_dense, -1, 1, true, true>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: required from 'class Eigen::BlockImpl, -1, 1, true, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from 'class Eigen::Block, -1, 1, true>' integration.cpp:130:41: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Block, -1, 1, true>, const Eigen::Block, -1, 1, true> >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Block, -1, 1, true>, const Eigen::Block, -1, 1, true> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Block, -1, 1, true>, const Eigen::Block, -1, 1, true> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::Block, -1, 1, true>, const Eigen::Block, -1, 1, true>, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::Block, -1, 1, true>, const Eigen::Block, -1, 1, true> >' integration.cpp:130:60: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 0, Eigen::Stride<0, 0> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, 0, Eigen::Stride<0, 0> >, 0>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: required from 'class Eigen::MapBase, 0, Eigen::Stride<0, 0> >, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from 'class Eigen::Map, 0, Eigen::Stride<0, 0> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1084:12: required from 'Eigen::SparseMatrix<_Scalar, _Options, _StorageIndex>& Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::operator=(const Eigen::SparseMatrixBase&) [with OtherDerived = Eigen::SparseView >; _Scalar = double; int _Options = 0; _StorageIndex = int]' integration.cpp:83:42: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:298:80: required from 'struct Eigen::internal::evaluator > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1391:8: required from 'struct Eigen::internal::evaluator >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from 'struct Eigen::internal::evaluator >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseCwiseBinaryOp.h:64:51: required from 'struct Eigen::internal::binary_evaluator, const Eigen::SparseMatrix, const Eigen::Product >, Eigen::SparseMatrix, 2> >, Eigen::internal::IteratorBased, Eigen::internal::IteratorBased, double, double>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:665:8: required from 'struct Eigen::internal::evaluator, const Eigen::SparseMatrix, const Eigen::Product >, Eigen::SparseMatrix, 2> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:683:97: required from 'Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::SparseMatrix(const Eigen::SparseMatrixBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::SparseMatrix, const Eigen::Product >, Eigen::SparseMatrix, 2> >; _Scalar = double; int _Options = 0; _StorageIndex = int]' integration.cpp:94:85: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/SparseCore:37, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Sparse:26, from /usr/lib/R/site-library/RcppEigen/include/RcppEigenForward.h:31, from /usr/lib/R/site-library/RcppEigen/include/RcppEigen.h:25, from integration.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of 'class Eigen::SparseMatrixBase >': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from 'class Eigen::SparseCompressedBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7: required from 'class Eigen::SparseMatrix' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:926:66: required from 'void Eigen::internal::set_from_triplets(const InputIterator&, const InputIterator&, SparseMatrixType&, DupFunctor) [with InputIterator = __gnu_cxx::__normal_iterator*, std::vector > >; SparseMatrixType = Eigen::SparseMatrix; DupFunctor = FindWeightsC(Rcpp::NumericVector, Eigen::MatrixXd, std::vector >, std::vector >, Eigen::MatrixXd, Eigen::VectorXd, double, double, bool)::]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1012:103: required from 'void Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::setFromTriplets(const InputIterators&, const InputIterators&, DupFunctor) [with InputIterators = __gnu_cxx::__normal_iterator*, std::vector > >; DupFunctor = FindWeightsC(Rcpp::NumericVector, Eigen::MatrixXd, std::vector >, std::vector >, Eigen::MatrixXd, Eigen::VectorXd, double, double, bool)::; _Scalar = double; int _Options = 0; _StorageIndex = int]' integration.cpp:59:123: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:439, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/RcppEigen/include/RcppEigenForward.h:30, from /usr/lib/R/site-library/RcppEigen/include/RcppEigen.h:25, from integration.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 2>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 0, Eigen::Stride<0, 0> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, 0, Eigen::Stride<0, 0> >, 0>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from 'class Eigen::Map, 0, Eigen::Stride<0, 0> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:65:29: required from 'Eigen::Index Eigen::SparseCompressedBase::nonZeros() const [with Derived = Eigen::SparseMatrix; Eigen::Index = long int]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:163:21: required from 'Eigen::SparseCompressedBase::InnerIterator::InnerIterator(const Eigen::SparseCompressedBase&, Eigen::Index) [with Derived = Eigen::SparseMatrix; Eigen::Index = long int]' integration.cpp:62:73: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseBinaryOp, const Eigen::Block, -1, 1, true>, const Eigen::Block, -1, 1, true> > >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseBinaryOp, const Eigen::Block, -1, 1, true>, const Eigen::Block, -1, 1, true> > > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::CwiseBinaryOp, const Eigen::Block, -1, 1, true>, const Eigen::Block, -1, 1, true> > > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from 'class Eigen::CwiseUnaryOpImpl, const Eigen::CwiseBinaryOp, const Eigen::Block, -1, 1, true>, const Eigen::Block, -1, 1, true> >, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from 'class Eigen::CwiseUnaryOp, const Eigen::CwiseBinaryOp, const Eigen::Block, -1, 1, true>, const Eigen::Block, -1, 1, true> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Dot.h:98:40: required from 'typename Eigen::NumTraits::Scalar>::Real Eigen::MatrixBase::squaredNorm() const [with Derived = Eigen::CwiseBinaryOp, const Eigen::Block, -1, 1, true>, const Eigen::Block, -1, 1, true> >; typename Eigen::NumTraits::Scalar>::Real = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Dot.h:110:23: required from 'typename Eigen::NumTraits::Scalar>::Real Eigen::MatrixBase::norm() const [with Derived = Eigen::CwiseBinaryOp, const Eigen::Block, -1, 1, true>, const Eigen::Block, -1, 1, true> >; typename Eigen::NumTraits::Scalar>::Real = double]' integration.cpp:130:68: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:298:80: required from 'struct Eigen::internal::evaluator > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1391:8: required from 'struct Eigen::internal::evaluator >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1067:93: required from 'Eigen::SparseMatrix<_Scalar, _Options, _StorageIndex>& Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::operator=(const Eigen::SparseMatrixBase&) [with OtherDerived = Eigen::SparseMatrix; _Scalar = double; int _Options = 0; _StorageIndex = int]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:949:7: required from 'void Eigen::internal::set_from_triplets(const InputIterator&, const InputIterator&, SparseMatrixType&, DupFunctor) [with InputIterator = __gnu_cxx::__normal_iterator*, std::vector > >; SparseMatrixType = Eigen::SparseMatrix; DupFunctor = FindWeightsC(Rcpp::NumericVector, Eigen::MatrixXd, std::vector >, std::vector >, Eigen::MatrixXd, Eigen::VectorXd, double, double, bool)::]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1012:103: required from 'void Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::setFromTriplets(const InputIterators&, const InputIterators&, DupFunctor) [with InputIterators = __gnu_cxx::__normal_iterator*, std::vector > >; DupFunctor = FindWeightsC(Rcpp::NumericVector, Eigen::MatrixXd, std::vector >, std::vector >, Eigen::MatrixXd, Eigen::VectorXd, double, double, bool)::; _Scalar = double; int _Options = 0; _StorageIndex = int]' integration.cpp:59:123: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::Matrix >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::Matrix > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, Eigen::Matrix > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from 'class Eigen::CwiseNullaryOp, Eigen::Matrix >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:327:30: required from 'Derived& Eigen::DenseBase::setConstant(const Scalar&) [with Derived = Eigen::Map, 0, Eigen::Stride<0, 0> >; Eigen::DenseBase::Scalar = int]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:501:10: required from 'Derived& Eigen::DenseBase::setZero() [with Derived = Eigen::Map, 0, Eigen::Stride<0, 0> >]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1084:73: required from 'Eigen::SparseMatrix<_Scalar, _Options, _StorageIndex>& Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::operator=(const Eigen::SparseMatrixBase&) [with OtherDerived = Eigen::SparseView >; _Scalar = double; int _Options = 0; _StorageIndex = int]' integration.cpp:83:42: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase >, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase >, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from 'class Eigen::TransposeImpl, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from 'class Eigen::Transpose >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:829:17: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Block, 1, -1, false>; Func = Eigen::internal::assign_op]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from 'Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Block, 1, -1, false>; Derived = Eigen::Matrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:19: required from 'Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Block, 1, -1, false>; Derived = Eigen::Matrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Block, 1, -1, false>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]' integration.cpp:43:46: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:445, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/RcppEigen/include/RcppEigenForward.h:30, from /usr/lib/R/site-library/RcppEigen/include/RcppEigen.h:25, from integration.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator, -1, 1, true> >': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from 'struct Eigen::internal::evaluator, -1, 1, true> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:681:37: required from 'struct Eigen::internal::binary_evaluator, const Eigen::Block, -1, 1, true>, const Eigen::Block, -1, 1, true> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:665:8: required from 'struct Eigen::internal::evaluator, const Eigen::Block, -1, 1, true>, const Eigen::Block, -1, 1, true> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from 'struct Eigen::internal::evaluator, const Eigen::Block, -1, 1, true>, const Eigen::Block, -1, 1, true> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:522:41: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:349:33: required from 'class Eigen::internal::redux_evaluator, const Eigen::CwiseBinaryOp, const Eigen::Block, -1, 1, true>, const Eigen::Block, -1, 1, true> > > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:416:17: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseUnaryOp, const Eigen::CwiseBinaryOp, const Eigen::Block, -1, 1, true>, const Eigen::Block, -1, 1, true> > >; typename Eigen::internal::traits::Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:453:25: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::CwiseUnaryOp, const Eigen::CwiseBinaryOp, const Eigen::Block, -1, 1, true>, const Eigen::Block, -1, 1, true> > >; typename Eigen::internal::traits::Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Dot.h:98:46: required from 'typename Eigen::NumTraits::Scalar>::Real Eigen::MatrixBase::squaredNorm() const [with Derived = Eigen::CwiseBinaryOp, const Eigen::Block, -1, 1, true>, const Eigen::Block, -1, 1, true> >; typename Eigen::NumTraits::Scalar>::Real = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Dot.h:110:23: required from 'typename Eigen::NumTraits::Scalar>::Real Eigen::MatrixBase::norm() const [with Derived = Eigen::CwiseBinaryOp, const Eigen::Block, -1, 1, true>, const Eigen::Block, -1, 1, true> >; typename Eigen::NumTraits::Scalar>::Real = double]' integration.cpp:130:68: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 989 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator, 1, -1, false> >': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:730:20: required from 'void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Transpose >; SrcXprType = Eigen::Block, 1, -1, false>; Functor = Eigen::internal::assign_op]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31: required from 'static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Transpose >; SrcXprType = Eigen::Block, 1, -1, false>; Functor = Eigen::internal::assign_op; Weak = void]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::Block, 1, -1, false>; Func = Eigen::internal::assign_op]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from 'Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::Block, 1, -1, false>; Derived = Eigen::Matrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:19: required from 'Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::Block, 1, -1, false>; Derived = Eigen::Matrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::Block, 1, -1, false>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]' integration.cpp:43:46: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:439, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/RcppEigen/include/RcppEigenForward.h:30, from /usr/lib/R/site-library/RcppEigen/include/RcppEigen.h:25, from integration.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase&) [with Derived = Eigen::Map, 0, Eigen::Stride<0, 0> >; Eigen::Index = long int]': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:225:63: required from 'static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Derived&, const Func&) [with Func = Eigen::internal::scalar_sum_op; Derived = Eigen::internal::redux_evaluator, 0, Eigen::Stride<0, 0> > >; Eigen::internal::redux_impl::Scalar = int]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::Map, 0, Eigen::Stride<0, 0> >; typename Eigen::internal::traits::Scalar = int]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:453:25: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::Map, 0, Eigen::Stride<0, 0> >; typename Eigen::internal::traits::Scalar = int]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:65:35: required from 'Eigen::Index Eigen::SparseCompressedBase::nonZeros() const [with Derived = Eigen::SparseMatrix; Eigen::Index = long int]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:163:21: required from 'Eigen::SparseCompressedBase::InnerIterator::InnerIterator(const Eigen::SparseCompressedBase&, Eigen::Index) [with Derived = Eigen::SparseMatrix; Eigen::Index = long int]' integration.cpp:62:73: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:650:74: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] 650 | return internal::first_aligned::alignment),Derived>(m); | ^~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase&) [with Derived = Eigen::CwiseUnaryOp, const Eigen::CwiseBinaryOp, const Eigen::Block, -1, 1, true>, const Eigen::Block, -1, 1, true> > >; Eigen::Index = long int]': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:225:63: required from 'static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Derived&, const Func&) [with Func = Eigen::internal::scalar_sum_op; Derived = Eigen::internal::redux_evaluator, const Eigen::CwiseBinaryOp, const Eigen::Block, -1, 1, true>, const Eigen::Block, -1, 1, true> > > >; Eigen::internal::redux_impl::Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseUnaryOp, const Eigen::CwiseBinaryOp, const Eigen::Block, -1, 1, true>, const Eigen::Block, -1, 1, true> > >; typename Eigen::internal::traits::Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:453:25: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::CwiseUnaryOp, const Eigen::CwiseBinaryOp, const Eigen::Block, -1, 1, true>, const Eigen::Block, -1, 1, true> > >; typename Eigen::internal::traits::Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Dot.h:98:46: required from 'typename Eigen::NumTraits::Scalar>::Real Eigen::MatrixBase::squaredNorm() const [with Derived = Eigen::CwiseBinaryOp, const Eigen::Block, -1, 1, true>, const Eigen::Block, -1, 1, true> >; typename Eigen::NumTraits::Scalar>::Real = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Dot.h:110:23: required from 'typename Eigen::NumTraits::Scalar>::Real Eigen::MatrixBase::norm() const [with Derived = Eigen::CwiseBinaryOp, const Eigen::Block, -1, 1, true>, const Eigen::Block, -1, 1, true> >; typename Eigen::NumTraits::Scalar>::Real = double]' integration.cpp:130:68: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:650:74: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, -1, 1, true>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from 'class Eigen::DenseCoeffsBase, -1, 1, true>, 2>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, -1, 1, true> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, -1, 1, true> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, -1, 1, true>, 0>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from 'class Eigen::internal::BlockImpl_dense, -1, 1, true, true>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31: required from 'static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Transpose >; SrcXprType = Eigen::PartialReduxExpr, Eigen::internal::member_sum, 0>; Functor = Eigen::internal::assign_op; Weak = void]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::PartialReduxExpr, Eigen::internal::member_sum, 0>; Func = Eigen::internal::assign_op]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from 'Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::PartialReduxExpr, Eigen::internal::member_sum, 0>; Derived = Eigen::Matrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:19: required from 'Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::PartialReduxExpr, Eigen::internal::member_sum, 0>; Derived = Eigen::Matrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::PartialReduxExpr, Eigen::internal::member_sum, 0>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]' integration.cpp:77:58: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 1, -1, false>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from 'class Eigen::DenseCoeffsBase, 1, -1, false>, 2>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 1, -1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 1, -1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, 1, -1, false>, 0>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from 'class Eigen::internal::BlockImpl_dense, 1, -1, false, true>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 6 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31: required from 'static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Transpose >; SrcXprType = Eigen::PartialReduxExpr, Eigen::internal::member_sum, 0>; Functor = Eigen::internal::assign_op; Weak = void]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::PartialReduxExpr, Eigen::internal::member_sum, 0>; Func = Eigen::internal::assign_op]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from 'Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::PartialReduxExpr, Eigen::internal::member_sum, 0>; Derived = Eigen::Matrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:19: required from 'Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::PartialReduxExpr, Eigen::internal::member_sum, 0>; Derived = Eigen::Matrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::PartialReduxExpr, Eigen::internal::member_sum, 0>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]' integration.cpp:77:58: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:445, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/RcppEigen/include/RcppEigenForward.h:30, from /usr/lib/R/site-library/RcppEigen/include/RcppEigen.h:25, from integration.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator, -1, 1, true> >': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:349:33: required from 'class Eigen::internal::redux_evaluator, -1, 1, true> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:416:17: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::Block, -1, 1, true>; typename Eigen::internal::traits::Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:453:25: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::Block, -1, 1, true>; typename Eigen::internal::traits::Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/VectorwiseOp.h:104:1: required from 'ResultType Eigen::internal::member_sum::operator()(const XprType&) const [with XprType = Eigen::Block, -1, 1, true>; ResultType = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1316:23: required from 'const Scalar Eigen::internal::evaluator >::coeff(Eigen::Index) const [with ArgType = Eigen::Matrix; MemberOp = Eigen::internal::member_sum; int Direction = 0; Eigen::internal::evaluator >::Scalar = double; Eigen::Index = long int]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:637:61: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31: required from 'static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Transpose >; SrcXprType = Eigen::PartialReduxExpr, Eigen::internal::member_sum, 0>; Functor = Eigen::internal::assign_op; Weak = void]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::PartialReduxExpr, Eigen::internal::member_sum, 0>; Func = Eigen::internal::assign_op]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from 'Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::PartialReduxExpr, Eigen::internal::member_sum, 0>; Derived = Eigen::Matrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:19: required from 'Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::PartialReduxExpr, Eigen::internal::member_sum, 0>; Derived = Eigen::Matrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::PartialReduxExpr, Eigen::internal::member_sum, 0>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]' integration.cpp:77:58: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 989 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator, 1, -1, false> >': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:349:33: required from 'class Eigen::internal::redux_evaluator, 1, -1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:416:17: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::Block, 1, -1, false>; typename Eigen::internal::traits::Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:453:25: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::Block, 1, -1, false>; typename Eigen::internal::traits::Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/VectorwiseOp.h:104:1: required from 'ResultType Eigen::internal::member_sum::operator()(const XprType&) const [with XprType = Eigen::Block, 1, -1, false>; ResultType = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1318:23: required from 'const Scalar Eigen::internal::evaluator >::coeff(Eigen::Index) const [with ArgType = Eigen::Matrix; MemberOp = Eigen::internal::member_sum; int Direction = 0; Eigen::internal::evaluator >::Scalar = double; Eigen::Index = long int]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:637:61: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31: required from 'static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Transpose >; SrcXprType = Eigen::PartialReduxExpr, Eigen::internal::member_sum, 0>; Functor = Eigen::internal::assign_op; Weak = void]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::PartialReduxExpr, Eigen::internal::member_sum, 0>; Func = Eigen::internal::assign_op]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from 'Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::PartialReduxExpr, Eigen::internal::member_sum, 0>; Derived = Eigen::Matrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:19: required from 'Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::PartialReduxExpr, Eigen::internal::member_sum, 0>; Derived = Eigen::Matrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::PartialReduxExpr, Eigen::internal::member_sum, 0>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]' integration.cpp:77:58: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:439, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/RcppEigen/include/RcppEigenForward.h:30, from /usr/lib/R/site-library/RcppEigen/include/RcppEigen.h:25, from integration.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase&) [with Derived = Eigen::Block, -1, 1, true>; Eigen::Index = long int]': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:225:63: required from 'static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Derived&, const Func&) [with Func = Eigen::internal::scalar_sum_op; Derived = Eigen::internal::redux_evaluator, -1, 1, true> >; Eigen::internal::redux_impl::Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::Block, -1, 1, true>; typename Eigen::internal::traits::Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:453:25: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::Block, -1, 1, true>; typename Eigen::internal::traits::Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/VectorwiseOp.h:104:1: required from 'ResultType Eigen::internal::member_sum::operator()(const XprType&) const [with XprType = Eigen::Block, -1, 1, true>; ResultType = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1316:23: required from 'const Scalar Eigen::internal::evaluator >::coeff(Eigen::Index) const [with ArgType = Eigen::Matrix; MemberOp = Eigen::internal::member_sum; int Direction = 0; Eigen::internal::evaluator >::Scalar = double; Eigen::Index = long int]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:637:61: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:879:31: required from 'static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Transpose >; SrcXprType = Eigen::PartialReduxExpr, Eigen::internal::member_sum, 0>; Functor = Eigen::internal::assign_op; Weak = void]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::PartialReduxExpr, Eigen::internal::member_sum, 0>; Func = Eigen::internal::assign_op]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:732:41: required from 'Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::PartialReduxExpr, Eigen::internal::member_sum, 0>; Derived = Eigen::Matrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:537:19: required from 'Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::PartialReduxExpr, Eigen::internal::member_sum, 0>; Derived = Eigen::Matrix]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:377:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::PartialReduxExpr, Eigen::internal::member_sum, 0>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]' integration.cpp:77:58: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:650:74: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 650 | return internal::first_aligned::alignment),Derived>(m); | ^~~~~~~~~ g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -I'/usr/lib/R/site-library/RcppEigen/include' -I'/usr/lib/R/site-library/RcppProgress/include' -fpic -g -O2 -ffile-prefix-map=/build/r-base-XqSJAD/r-base-4.0.4=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c snn.cpp -o snn.o In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:397, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/RcppEigen/include/RcppEigenForward.h:30, from /usr/lib/R/site-library/RcppEigen/include/RcppEigen.h:25, from snn.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:60:39: warning: ignoring attributes on template argument '__m128' [-Wignored-attributes] 60 | template<> struct is_arithmetic<__m128> { enum { value = true }; }; | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:61:40: warning: ignoring attributes on template argument '__m128i' [-Wignored-attributes] 61 | template<> struct is_arithmetic<__m128i> { enum { value = true }; }; | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:62:40: warning: ignoring attributes on template argument '__m128d' [-Wignored-attributes] 62 | template<> struct is_arithmetic<__m128d> { enum { value = true }; }; | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:161:43: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__m128'} [-Wignored-attributes] 161 | template<> struct unpacket_traits { typedef float type; enum {size=4, alignment=Aligned16}; typedef Packet4f half; }; | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:162:43: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__m128d'} [-Wignored-attributes] 162 | template<> struct unpacket_traits { typedef double type; enum {size=2, alignment=Aligned16}; typedef Packet2d half; }; | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:163:43: warning: ignoring attributes on template argument 'Eigen::internal::Packet4i' {aka '__m128i'} [-Wignored-attributes] 163 | template<> struct unpacket_traits { typedef int type; enum {size=4, alignment=Aligned16}; typedef Packet4i half; }; | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:718:35: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__m128'} [-Wignored-attributes] 718 | struct palign_impl | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:741:35: warning: ignoring attributes on template argument 'Eigen::internal::Packet4i' {aka '__m128i'} [-Wignored-attributes] 741 | struct palign_impl | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:764:35: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__m128d'} [-Wignored-attributes] 764 | struct palign_impl | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:778:34: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__m128'} [-Wignored-attributes] 778 | ptranspose(PacketBlock& kernel) { | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:783:34: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__m128d'} [-Wignored-attributes] 783 | ptranspose(PacketBlock& kernel) { | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:790:34: warning: ignoring attributes on template argument 'Eigen::internal::Packet4i' {aka '__m128i'} [-Wignored-attributes] 790 | ptranspose(PacketBlock& kernel) { | ^ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:377, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/RcppEigen/include/RcppEigenForward.h:30, from /usr/lib/R/site-library/RcppEigen/include/RcppEigen.h:25, from snn.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:15:70: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__m128'} [-Wignored-attributes] 15 | template<> struct conj_helper { \ | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:232:1: note: in expansion of macro 'EIGEN_MAKE_CONJ_HELPER_CPLX_REAL' 232 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:22:70: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__m128'} [-Wignored-attributes] 22 | template<> struct conj_helper { \ | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:232:1: note: in expansion of macro 'EIGEN_MAKE_CONJ_HELPER_CPLX_REAL' 232 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:15:70: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__m128d'} [-Wignored-attributes] 15 | template<> struct conj_helper { \ | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:417:1: note: in expansion of macro 'EIGEN_MAKE_CONJ_HELPER_CPLX_REAL' 417 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:22:70: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__m128d'} [-Wignored-attributes] 22 | template<> struct conj_helper { \ | ^ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:417:1: note: in expansion of macro 'EIGEN_MAKE_CONJ_HELPER_CPLX_REAL' 417 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:370, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/RcppEigen/include/RcppEigenForward.h:30, from /usr/lib/R/site-library/RcppEigen/include/RcppEigen.h:25, from snn.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of 'struct Eigen::internal::find_best_packet': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from 'struct Eigen::internal::traits >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:243:49: required from 'struct Eigen::internal::traits >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:24:46: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(4) float>::half' {aka '__m128'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128'} [-Wignored-attributes] 205 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:439, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/RcppEigen/include/RcppEigenForward.h:30, from /usr/lib/R/site-library/RcppEigen/include/RcppEigen.h:25, from snn.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from 'class Eigen::QuaternionBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:250:7: required from 'class Eigen::Quaternion' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:27:3: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:370, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/RcppEigen/include/RcppEigenForward.h:30, from /usr/lib/R/site-library/RcppEigen/include/RcppEigen.h:25, from snn.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of 'struct Eigen::internal::find_best_packet': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from 'struct Eigen::internal::traits >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:243:49: required from 'struct Eigen::internal::traits >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:88:47: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 205 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:439, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/RcppEigen/include/RcppEigenForward.h:30, from /usr/lib/R/site-library/RcppEigen/include/RcppEigen.h:25, from snn.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from 'class Eigen::QuaternionBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:250:7: required from 'class Eigen::Quaternion' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SSE.h:92:3: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/SparseCore:37, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Sparse:26, from /usr/lib/R/site-library/RcppEigen/include/RcppEigenForward.h:31, from /usr/lib/R/site-library/RcppEigen/include/RcppEigen.h:25, from snn.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of 'class Eigen::SparseMatrixBase >': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from 'class Eigen::SparseCompressedBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7: required from 'class Eigen::SparseMatrix' /usr/lib/R/site-library/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/ConstrainedConjGrad.h:61:25: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:370, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/RcppEigen/include/RcppEigenForward.h:30, from /usr/lib/R/site-library/RcppEigen/include/RcppEigen.h:25, from snn.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of 'struct Eigen::internal::find_best_packet': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from 'struct Eigen::internal::traits >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' /usr/lib/R/site-library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:168:29: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) long long int>::half' {aka '__m128i'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] 205 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:439, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/RcppEigen/include/RcppEigenForward.h:30, from /usr/lib/R/site-library/RcppEigen/include/RcppEigen.h:25, from snn.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' /usr/lib/R/site-library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:168:29: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase >, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase >, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Transpose.h:115:37: required from 'class Eigen::TransposeImpl, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from 'class Eigen::Transpose >' /usr/lib/R/site-library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:178:72: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' /usr/lib/R/site-library/RcppEigen/include/unsupported/Eigen/src/KroneckerProduct/KroneckerTensorProduct.h:179:36: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:370, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/RcppEigen/include/RcppEigenForward.h:30, from /usr/lib/R/site-library/RcppEigen/include/RcppEigen.h:25, from snn.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of 'struct Eigen::internal::find_best_packet': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from 'struct Eigen::internal::traits >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' snn.cpp:16:79: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:44: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 187 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:187:83: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:205:88: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 205 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:439, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/RcppEigen/include/RcppEigenForward.h:30, from /usr/lib/R/site-library/RcppEigen/include/RcppEigen.h:25, from snn.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' snn.cpp:16:79: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/SparseCore:37, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Sparse:26, from /usr/lib/R/site-library/RcppEigen/include/RcppEigenForward.h:31, from /usr/lib/R/site-library/RcppEigen/include/RcppEigen.h:25, from snn.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of 'class Eigen::SparseMatrixBase > >': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from 'class Eigen::SparseCompressedBase > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseTranspose.h:22:9: required from 'class Eigen::internal::SparseTransposeImpl, 1024>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseTranspose.h:45:37: required from 'class Eigen::TransposeImpl, Eigen::Sparse>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Transpose.h:52:37: required from 'class Eigen::Transpose >' snn.cpp:27:30: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of 'class Eigen::SparseMatrixBase, Eigen::Transpose >, 2> >': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:140:7: required from 'class Eigen::ProductImpl, Eigen::Transpose >, 2, Eigen::Sparse>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Product.h:71:7: required from 'class Eigen::Product, Eigen::Transpose >, 2>' snn.cpp:27:31: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:439, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/RcppEigen/include/RcppEigenForward.h:30, from /usr/lib/R/site-library/RcppEigen/include/RcppEigen.h:25, from snn.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 1, -1, false>, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 1, -1, false>, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 1, -1, false>, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 1, -1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 1, -1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, 1, -1, false>, 0>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: required from 'class Eigen::MapBase, 1, -1, false>, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from 'class Eigen::internal::BlockImpl_dense, 1, -1, false, true>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: required from 'class Eigen::BlockImpl, 1, -1, false, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from 'class Eigen::Block, 1, -1, false>' snn.cpp:106:35: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Block, 1, -1, false>, const Eigen::Block, 1, -1, false> >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Block, 1, -1, false>, const Eigen::Block, 1, -1, false> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Block, 1, -1, false>, const Eigen::Block, 1, -1, false> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::Block, 1, -1, false>, const Eigen::Block, 1, -1, false>, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::Block, 1, -1, false>, const Eigen::Block, 1, -1, false> >' snn.cpp:106:48: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:298:80: required from 'struct Eigen::internal::evaluator > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1391:8: required from 'struct Eigen::internal::evaluator >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:96:8: required from 'struct Eigen::internal::product_evaluator, Eigen::Transpose >, 2>, 8, Eigen::SparseShape, Eigen::SparseShape, double, double>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/ProductEvaluators.h:29:8: required from 'struct Eigen::internal::evaluator, Eigen::Transpose >, 2> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1067:93: required from 'Eigen::SparseMatrix<_Scalar, _Options, _StorageIndex>& Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::operator=(const Eigen::SparseMatrixBase&) [with OtherDerived = Eigen::Product, Eigen::Transpose >, 2>; _Scalar = double; int _Options = 0; _StorageIndex = int]' snn.cpp:27:31: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:300:7: required from 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:551:7: required from 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 3>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 0, Eigen::Stride<0, 0> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, 0, Eigen::Stride<0, 0> >, 0>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:221:34: required from 'class Eigen::MapBase, 0, Eigen::Stride<0, 0> >, 1>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from 'class Eigen::Map, 0, Eigen::Stride<0, 0> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1084:12: required from 'Eigen::SparseMatrix<_Scalar, _Options, _StorageIndex>& Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::operator=(const Eigen::SparseMatrixBase&) [with OtherDerived = Eigen::Product, Eigen::Transpose >, 2>; _Scalar = double; int _Options = 0; _StorageIndex = int]' snn.cpp:27:31: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/SparseCore:37, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Sparse:26, from /usr/lib/R/site-library/RcppEigen/include/RcppEigenForward.h:31, from /usr/lib/R/site-library/RcppEigen/include/RcppEigen.h:25, from snn.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of 'class Eigen::SparseMatrixBase >': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from 'class Eigen::SparseCompressedBase >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7: required from 'class Eigen::SparseMatrix' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:926:66: required from 'void Eigen::internal::set_from_triplets(const InputIterator&, const InputIterator&, SparseMatrixType&, DupFunctor) [with InputIterator = __gnu_cxx::__normal_iterator*, std::vector > >; SparseMatrixType = Eigen::SparseMatrix; DupFunctor = Eigen::internal::scalar_sum_op]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:996:92: required from 'void Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::setFromTriplets(const InputIterators&, const InputIterators&) [with InputIterators = __gnu_cxx::__normal_iterator*, std::vector > >; _Scalar = double; int _Options = 0; _StorageIndex = int]' snn.cpp:26:61: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:439, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/RcppEigen/include/RcppEigenForward.h:30, from /usr/lib/R/site-library/RcppEigen/include/RcppEigen.h:25, from snn.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:478:7: required from 'class Eigen::DenseCoeffsBase, 0, Eigen::Stride<0, 0> >, 2>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 0, Eigen::Stride<0, 0> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 0, Eigen::Stride<0, 0> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, 0, Eigen::Stride<0, 0> >, 0>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Map.h:94:79: required from 'class Eigen::Map, 0, Eigen::Stride<0, 0> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:65:29: required from 'Eigen::Index Eigen::SparseCompressedBase::nonZeros() const [with Derived = Eigen::SparseMatrix; Eigen::Index = long int]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:163:21: required from 'Eigen::SparseCompressedBase::InnerIterator::InnerIterator(const Eigen::SparseCompressedBase&, Eigen::Index) [with Derived = Eigen::SparseMatrix; Eigen::Index = long int]' snn.cpp:29:62: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] 55 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseBinaryOp, const Eigen::Block, 1, -1, false>, const Eigen::Block, 1, -1, false> > >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseBinaryOp, const Eigen::Block, 1, -1, false>, const Eigen::Block, 1, -1, false> > > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::CwiseBinaryOp, const Eigen::Block, 1, -1, false>, const Eigen::Block, 1, -1, false> > > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from 'class Eigen::CwiseUnaryOpImpl, const Eigen::CwiseBinaryOp, const Eigen::Block, 1, -1, false>, const Eigen::Block, 1, -1, false> >, Eigen::Dense>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from 'class Eigen::CwiseUnaryOp, const Eigen::CwiseBinaryOp, const Eigen::Block, 1, -1, false>, const Eigen::Block, 1, -1, false> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Dot.h:98:40: required from 'typename Eigen::NumTraits::Scalar>::Real Eigen::MatrixBase::squaredNorm() const [with Derived = Eigen::CwiseBinaryOp, const Eigen::Block, 1, -1, false>, const Eigen::Block, 1, -1, false> >; typename Eigen::NumTraits::Scalar>::Real = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Dot.h:110:23: required from 'typename Eigen::NumTraits::Scalar>::Real Eigen::MatrixBase::norm() const [with Derived = Eigen::CwiseBinaryOp, const Eigen::Block, 1, -1, false>, const Eigen::Block, 1, -1, false> >; typename Eigen::NumTraits::Scalar>::Real = double]' snn.cpp:106:56: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:298:80: required from 'struct Eigen::internal::evaluator > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1391:8: required from 'struct Eigen::internal::evaluator >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1067:93: required from 'Eigen::SparseMatrix<_Scalar, _Options, _StorageIndex>& Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::operator=(const Eigen::SparseMatrixBase&) [with OtherDerived = Eigen::SparseMatrix; _Scalar = double; int _Options = 0; _StorageIndex = int]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:949:7: required from 'void Eigen::internal::set_from_triplets(const InputIterator&, const InputIterator&, SparseMatrixType&, DupFunctor) [with InputIterator = __gnu_cxx::__normal_iterator*, std::vector > >; SparseMatrixType = Eigen::SparseMatrix; DupFunctor = Eigen::internal::scalar_sum_op]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:996:92: required from 'void Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::setFromTriplets(const InputIterators&, const InputIterators&) [with InputIterators = __gnu_cxx::__normal_iterator*, std::vector > >; _Scalar = double; int _Options = 0; _StorageIndex = int]' snn.cpp:26:61: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::Matrix >, 0>': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::Matrix > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, Eigen::Matrix > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from 'class Eigen::CwiseNullaryOp, Eigen::Matrix >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:327:30: required from 'Derived& Eigen::DenseBase::setConstant(const Scalar&) [with Derived = Eigen::Map, 0, Eigen::Stride<0, 0> >; Eigen::DenseBase::Scalar = int]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:501:10: required from 'Derived& Eigen::DenseBase::setZero() [with Derived = Eigen::Map, 0, Eigen::Stride<0, 0> >]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:1084:73: required from 'Eigen::SparseMatrix<_Scalar, _Options, _StorageIndex>& Eigen::SparseMatrix<_Scalar, _Flags, _StorageIndex>::operator=(const Eigen::SparseMatrixBase&) [with OtherDerived = Eigen::Product, Eigen::Transpose >, 2>; _Scalar = double; int _Options = 0; _StorageIndex = int]' snn.cpp:27:31: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:55:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:445, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/RcppEigen/include/RcppEigenForward.h:30, from /usr/lib/R/site-library/RcppEigen/include/RcppEigen.h:25, from snn.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator, 1, -1, false> >': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from 'struct Eigen::internal::evaluator, 1, -1, false> >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:681:37: required from 'struct Eigen::internal::binary_evaluator, const Eigen::Block, 1, -1, false>, const Eigen::Block, 1, -1, false> >, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:665:8: required from 'struct Eigen::internal::evaluator, const Eigen::Block, 1, -1, false>, const Eigen::Block, 1, -1, false> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:99:8: required from 'struct Eigen::internal::evaluator, const Eigen::Block, 1, -1, false>, const Eigen::Block, 1, -1, false> > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:522:41: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:349:33: required from 'class Eigen::internal::redux_evaluator, const Eigen::CwiseBinaryOp, const Eigen::Block, 1, -1, false>, const Eigen::Block, 1, -1, false> > > >' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:416:17: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseUnaryOp, const Eigen::CwiseBinaryOp, const Eigen::Block, 1, -1, false>, const Eigen::Block, 1, -1, false> > >; typename Eigen::internal::traits::Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:453:25: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::CwiseUnaryOp, const Eigen::CwiseBinaryOp, const Eigen::Block, 1, -1, false>, const Eigen::Block, 1, -1, false> > >; typename Eigen::internal::traits::Scalar = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Dot.h:98:46: required from 'typename Eigen::NumTraits::Scalar>::Real Eigen::MatrixBase::squaredNorm() const [with Derived = Eigen::CwiseBinaryOp, const Eigen::Block, 1, -1, false>, const Eigen::Block, 1, -1, false> >; typename Eigen::NumTraits::Scalar>::Real = double]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Dot.h:110:23: required from 'typename Eigen::NumTraits::Scalar>::Real Eigen::MatrixBase::norm() const [with Derived = Eigen::CwiseBinaryOp, const Eigen::Block, 1, -1, false>, const Eigen::Block, 1, -1, false> >; typename Eigen::NumTraits::Scalar>::Real = double]' snn.cpp:106:56: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:989:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 989 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/Core:439, from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:1, from /usr/lib/R/site-library/RcppEigen/include/RcppEigenForward.h:30, from /usr/lib/R/site-library/RcppEigen/include/RcppEigen.h:25, from snn.cpp:1: /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase&) [with Derived = Eigen::Map, 0, Eigen::Stride<0, 0> >; Eigen::Index = long int]': /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:225:63: required from 'static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Derived&, const Func&) [with Func = Eigen::internal::scalar_sum_op; Derived = Eigen::internal::redux_evaluator, 0, Eigen::Stride<0, 0> > >; Eigen::internal::redux_impl::Scalar = int]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::Map, 0, Eigen::Stride<0, 0> >; typename Eigen::internal::traits::Scalar = int]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/Redux.h:453:25: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::Map, 0, Eigen::Stride<0, 0> >; typename Eigen::internal::traits::Scalar = int]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:65:35: required from 'Eigen::Index Eigen::SparseCompressedBase::nonZeros() const [with Derived = Eigen::SparseMatrix; Eigen::Index = long int]' /usr/lib/R/site-library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:163:21: required from 'Eigen::SparseCompressedBase::InnerIterator::InnerIterator(const Eigen::SparseCompressedBase&, Eigen::Index) [with Derived = Eigen::SparseMatrix; Eigen::Index = long int]' snn.cpp:29:62: required from here /usr/lib/R/site-library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:650:74: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128i'} [-Wignored-attributes] 650 | return internal::first_aligned::alignment),Derived>(m); | ^~~~~~~~~ gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -I'/usr/lib/R/site-library/RcppEigen/include' -I'/usr/lib/R/site-library/RcppProgress/include' -fpic -g -O2 -ffile-prefix-map=/build/r-base-XqSJAD/r-base-4.0.4=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c valid_pointer.c -o valid_pointer.o g++ -std=gnu++11 -shared -L/usr/lib/R/lib -Wl,-z,relro -o Seurat.so ModularityOptimizer.o RModularityOptimizer.o RcppExports.o data_manipulation.o fast_NN_dist.o integration.o snn.o valid_pointer.o -L/usr/lib/R/lib -lR make[1]: Leaving directory '/build/reproducible-path/r-cran-seurat-4.0.0/src' make[1]: Entering directory '/build/reproducible-path/r-cran-seurat-4.0.0/src' make[1]: Leaving directory '/build/reproducible-path/r-cran-seurat-4.0.0/src' installing to /build/reproducible-path/r-cran-seurat-4.0.0/debian/r-cran-seurat/usr/lib/R/site-library/00LOCK-r-cran-seurat-4.0.0/00new/Seurat/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (Seurat) rm -f /build/reproducible-path/r-cran-seurat-4.0.0/debian/r-cran-seurat/usr/lib/R/site-library/Seurat/LICENSE W: Ignoring specified R dependency: R (>= 4.0.0) I: Using r-cran-testthat for Recommends:testthat I: Using r-cran-hdf5r for Recommends:hdf5r I: Using r-cran-ape for Suggests:ape I: Using r-cran-rsvd for Suggests:rsvd I: Using r-bioc-s4vectors for Suggests:S4Vectors I: Using r-bioc-summarizedexperiment for Suggests:SummarizedExperiment I: Using r-bioc-singlecellexperiment for Suggests:SingleCellExperiment W: Cannot find a debian package for Suggests:MAST I: Using r-bioc-deseq2 for Suggests:DESeq2 I: Using r-bioc-biocgenerics for Suggests:BiocGenerics I: Using r-bioc-genomicranges for Suggests:GenomicRanges I: Using r-bioc-genomeinfodb for Suggests:GenomeInfoDb I: Using r-bioc-iranges for Suggests:IRanges I: Using r-bioc-rtracklayer for Suggests:rtracklayer W: Cannot find a debian package for Suggests:Rfast2 I: Using r-bioc-monocle for Suggests:monocle I: Using r-bioc-biobase for Suggests:Biobase I: Using r-cran-vgam for Suggests:VGAM I: Using r-bioc-limma for Suggests:limma I: Using r-cran-metap for Suggests:metap W: Cannot find a debian package for Suggests:enrichR I: Using r-cran-mixtools for Suggests:mixtools I: Using r-cran-cluster for Imports:cluster I: Using r-cran-cowplot for Imports:cowplot I: Using r-cran-fitdistrplus for Imports:fitdistrplus I: Using r-cran-future for Imports:future I: Using r-cran-future.apply for Imports:future.apply I: Using r-cran-ggplot2 for Imports:ggplot2 (>= 3.3.0) I: Using r-cran-ggrepel for Imports:ggrepel I: Using r-cran-ggridges for Imports:ggridges I: Using r-cran-httr for Imports:httr I: Using r-cran-ica for Imports:ica I: Using r-cran-igraph for Imports:igraph I: Using r-cran-irlba for Imports:irlba I: Using r-cran-jsonlite for Imports:jsonlite I: Using r-cran-kernsmooth for Imports:KernSmooth I: Using r-cran-leiden for Imports:leiden (>= 0.3.1) I: Using r-cran-lmtest for Imports:lmtest I: Using r-cran-mass for Imports:MASS I: Using r-cran-matrix for Imports:Matrix (>= 1.2-14) I: Using r-cran-matrixstats for Imports:matrixStats I: Using r-cran-miniui for Imports:miniUI I: Using r-cran-patchwork for Imports:patchwork I: Using r-cran-pbapply for Imports:pbapply I: Using r-cran-plotly for Imports:plotly (>= 4.9.0) I: Using r-cran-png for Imports:png I: Using r-cran-rann for Imports:RANN I: Using r-cran-rcolorbrewer for Imports:RColorBrewer I: Using r-cran-rcpp for Imports:Rcpp I: Using r-cran-rcppannoy for Imports:RcppAnnoy (>= 0.0.18) I: Using r-cran-reticulate for Imports:reticulate I: Using r-cran-rlang for Imports:rlang I: Using r-cran-rocr for Imports:ROCR I: Using r-cran-rtsne for Imports:Rtsne I: Using r-cran-scales for Imports:scales I: Using r-cran-scattermore for Imports:scattermore (>= 0.7) I: Using r-cran-sctransform for Imports:sctransform (>= 0.3.2) I: Using r-cran-seuratobject for Imports:SeuratObject I: Using r-cran-shiny for Imports:shiny I: Using r-cran-spatstat for Imports:spatstat I: Using r-cran-tibble for Imports:tibble I: Using r-cran-uwot for Imports:uwot (>= 0.1.9) I: Using r-cran-rcpp for LinkingTo:Rcpp (>= 0.11.0) I: Using r-cran-rcppeigen for LinkingTo:RcppEigen I: Using r-cran-rcppprogress for LinkingTo:RcppProgress I: Use r-cran-seurat as Debian binary package for variables substitution dh_installdocs -O--buildsystem=R dh_installchangelogs -O--buildsystem=R dh_installsystemduser -O--buildsystem=R dh_perl -O--buildsystem=R dh_link -O--buildsystem=R dh_strip_nondeterminism -O--buildsystem=R dh_compress -O--buildsystem=R dh_fixperms -O--buildsystem=R dh_missing -O--buildsystem=R dh_dwz -a -O--buildsystem=R dh_strip -a -O--buildsystem=R dh_makeshlibs -a -O--buildsystem=R dh_shlibdeps -a -O--buildsystem=R dh_installdeb -O--buildsystem=R dh_gencontrol -O--buildsystem=R dh_md5sums -O--buildsystem=R dh_builddeb -O--buildsystem=R dpkg-deb: building package 'r-cran-seurat' in '../r-cran-seurat_4.0.0-2_amd64.deb'. dpkg-deb: building package 'r-cran-seurat-dbgsym' in '../r-cran-seurat-dbgsym_4.0.0-2_amd64.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../r-cran-seurat_4.0.0-2_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/3681494 and its subdirectories I: Current time: Fri Aug 15 06:51:09 -12 2025 I: pbuilder-time-stamp: 1755283869 Sat Jul 13 12:28:11 UTC 2024 I: 1st build successful. Starting 2nd build on remote node infom01-amd64.debian.net. Sat Jul 13 12:28:11 UTC 2024 I: Preparing to do remote build '2' on infom01-amd64.debian.net. Sat Jul 13 12:33:45 UTC 2024 I: Deleting $TMPDIR on infom01-amd64.debian.net. Sat Jul 13 12:33:46 UTC 2024 I: r-cran-seurat_4.0.0-2_amd64.changes: Format: 1.8 Date: Wed, 10 Feb 2021 08:19:01 +0100 Source: r-cran-seurat Binary: r-cran-seurat r-cran-seurat-dbgsym Architecture: amd64 Version: 4.0.0-2 Distribution: unstable Urgency: high Maintainer: Debian R Packages Maintainers Changed-By: Andreas Tille Description: r-cran-seurat - Tools for Single Cell Genomics Closes: 982421 Changes: r-cran-seurat (4.0.0-2) unstable; urgency=high . * Team upload. * Make sure excluded test on armhf and i386 will be really ignored Closes: #982421 Checksums-Sha1: 9b8bf18460c04acd54109a059254f493bdac8aaa 2966988 r-cran-seurat-dbgsym_4.0.0-2_amd64.deb 716ea80878f6a8132b0dc5387e9c62307992b129 15585 r-cran-seurat_4.0.0-2_amd64.buildinfo d989af5b459b12b47708a25a9aadf69aa9a5891d 2823700 r-cran-seurat_4.0.0-2_amd64.deb Checksums-Sha256: 7c869319e8c2c6e022e4225a4dddb4bc87bf9b11880c77e393127780bfccfa7e 2966988 r-cran-seurat-dbgsym_4.0.0-2_amd64.deb 9c0312272fdbd1c4bb9bba69e5ff2bdd40d13487517f687dc78a720dee280901 15585 r-cran-seurat_4.0.0-2_amd64.buildinfo 3238a9d4167f9ea855b0d8e54f99f183bfbb16d895d140326d5a199c3aded427 2823700 r-cran-seurat_4.0.0-2_amd64.deb Files: beb21a76dad070014ec59247a6e3a93a 2966988 debug optional r-cran-seurat-dbgsym_4.0.0-2_amd64.deb f0832c81cd5a132ff747c64e848c2371 15585 gnu-r optional r-cran-seurat_4.0.0-2_amd64.buildinfo d1ccd2904112c292665e29473cddd843 2823700 gnu-r optional r-cran-seurat_4.0.0-2_amd64.deb Sat Jul 13 12:33:47 UTC 2024 I: diffoscope 272 will be used to compare the two builds: Running as unit: rb-diffoscope-amd64_34-18677.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.jPKBxrr4/r-cran-seurat_4.0.0-2.diffoscope.html --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.jPKBxrr4/b1/r-cran-seurat_4.0.0-2_amd64.changes /srv/reproducible-results/rbuild-debian/r-b-build.jPKBxrr4/b2/r-cran-seurat_4.0.0-2_amd64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.333s) 0.333s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.078s) 0.078s 12 calls diffoscope.comparators.binary.FilesystemFile ## specialize (total time: 0.000s) 0.000s 1 call specialize Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 593ms CPU time consumed: 592ms Sat Jul 13 12:33:48 UTC 2024 I: diffoscope 272 found no differences in the changes files, and a .buildinfo file also exists. Sat Jul 13 12:33:48 UTC 2024 I: r-cran-seurat from bullseye built successfully and reproducibly on amd64. Sat Jul 13 12:33:49 UTC 2024 I: Submitting .buildinfo files to external archives: Sat Jul 13 12:33:49 UTC 2024 I: Submitting 20K b1/r-cran-seurat_4.0.0-2_amd64.buildinfo.asc Sat Jul 13 12:33:50 UTC 2024 I: Submitting 20K b2/r-cran-seurat_4.0.0-2_amd64.buildinfo.asc Sat Jul 13 12:33:51 UTC 2024 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Sat Jul 13 12:33:51 UTC 2024 I: Done submitting .buildinfo files. Sat Jul 13 12:33:51 UTC 2024 I: Removing signed r-cran-seurat_4.0.0-2_amd64.buildinfo.asc files: removed './b1/r-cran-seurat_4.0.0-2_amd64.buildinfo.asc' removed './b2/r-cran-seurat_4.0.0-2_amd64.buildinfo.asc'