Sun Aug 4 23:46:19 UTC 2024 I: starting to build libtfbs-perl/bullseye/amd64 on jenkins on '2024-08-04 23:46' Sun Aug 4 23:46:19 UTC 2024 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/amd64_27/28959/console.log Sun Aug 4 23:46:19 UTC 2024 I: Downloading source for bullseye/libtfbs-perl=0.7.1-3 --2024-08-04 23:46:19-- http://cdn-fastly.deb.debian.org/debian/pool/main/libt/libtfbs-perl/libtfbs-perl_0.7.1-3.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2207 (2.2K) [text/prs.lines.tag] Saving to: ‘libtfbs-perl_0.7.1-3.dsc’ 0K .. 100% 191M=0s 2024-08-04 23:46:19 (191 MB/s) - ‘libtfbs-perl_0.7.1-3.dsc’ saved [2207/2207] Sun Aug 4 23:46:19 UTC 2024 I: libtfbs-perl_0.7.1-3.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: libtfbs-perl Binary: libtfbs-perl Architecture: any Version: 0.7.1-3 Maintainer: Debian Med Packaging Team Uploaders: Steffen Moeller , Charles Plessy , Andreas Tille Homepage: http://tfbs.genereg.net Standards-Version: 4.4.0 Vcs-Browser: https://salsa.debian.org/med-team/libtfbs-perl Vcs-Git: https://salsa.debian.org/med-team/libtfbs-perl.git Testsuite: autopkgtest Testsuite-Triggers: libgd-gd2-perl, pkg-perl-autopkgtest, pkg-perl-autopkgtest-heavy Build-Depends: debhelper-compat (= 12), perl, pdl (>= 1:2.016), bioperl, libwww-perl, libdbi-perl Package-List: libtfbs-perl deb perl optional arch=any Checksums-Sha1: 4c613ee2cac2bdbc49d457a41ef7ef1b92f80546 388360 libtfbs-perl_0.7.1.orig.tar.gz e4d48b6f315e5fa424a36deafa72f2843e19fdc1 6268 libtfbs-perl_0.7.1-3.debian.tar.xz Checksums-Sha256: 26a09a3dfff5abeee6b2bdfd8a07023d99ace3d3e28352a3e856c271186f23aa 388360 libtfbs-perl_0.7.1.orig.tar.gz 905c4803ae4b94cea80f44aa1aa6962f2b572dd7706ea1452fdcc319d1158e59 6268 libtfbs-perl_0.7.1-3.debian.tar.xz Files: 90f94b3fa345b435262e803ceba05b40 388360 libtfbs-perl_0.7.1.orig.tar.gz 402fcdffe8e7e5af5246f95b58de9d56 6268 libtfbs-perl_0.7.1-3.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAl2DoVMRHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtH51w//TIlCVeh8HmskKA2axALAQ1N42V6Xe+3U xbremFSQbRyegDMB7TE+vCPfDl/1pla4Yv/eMX3Jqloe/WyCBeT7tXXLj714QYJW mj0HZl5HWUGazjzKt3SmlUhnVceFHarr5oHx7i/k5M1Nd55VbKgU3Rg24fMFI22z oWpGyWljLnwIAxlsKYpnKQB42D2r2pe2WhHNAd/ecHcAiwnPr/u6nuYhRKIesku0 9tBP+9oBouFT3orJ2fHFMappaoVGDSAL2RC8VyKVQCZPTkRyTpQy6EY7gpVHP2fn ZIaVW0CR0LzgTDmHm4M2a9+vFdczL15LRMDijJTc404IUQvZr1AZ3F2h3g2zSZTe rf0F9iDjbuTc6zCkWUfbsyDDBtETTH6tDt4fUvgkQ9NiW1vpFrOMK1aiOsVejHCG Vdl71sxsyTZg2Sinm9zRCUk48I2h8f5I8h4TDCfr8tDmp/wPawUi/xH6Zv33BTtk vEQMg27OSq6C6XGwLx6qk7/9H47mEzoe36tyb1mdMBlC4ZsudlFRWlRUy9BeSzPh eeG0GbEOS1ifNqLpGIGRSVjs7GIFoaFukC7rcbATLFkDZUTJh8t95HHfA1Xpneds lxhMxNXoDVDThIFK8JZjj/zDt+H7Nc/81ftAMB9nwL94UocbCgWBqOBWwNvmjuhg Nwi4x+RhNYA= =qq1V -----END PGP SIGNATURE----- Sun Aug 4 23:46:19 UTC 2024 I: Checking whether the package is not for us Sun Aug 4 23:46:19 UTC 2024 I: Starting 1st build on remote node ionos11-amd64.debian.net. Sun Aug 4 23:46:19 UTC 2024 I: Preparing to do remote build '1' on ionos11-amd64.debian.net. Sun Aug 4 23:47:42 UTC 2024 I: Deleting $TMPDIR on ionos11-amd64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Sun Aug 4 11:46:21 -12 2024 I: pbuilder-time-stamp: 1722815181 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bullseye-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [libtfbs-perl_0.7.1-3.dsc] I: copying [./libtfbs-perl_0.7.1.orig.tar.gz] I: copying [./libtfbs-perl_0.7.1-3.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/tmp/dpkg-verify-sig.qaZspkCw/trustedkeys.kbx': General error gpgv: Signature made Thu Sep 19 03:40:03 2019 -12 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./libtfbs-perl_0.7.1-3.dsc dpkg-source: info: extracting libtfbs-perl in libtfbs-perl-0.7.1 dpkg-source: info: unpacking libtfbs-perl_0.7.1.orig.tar.gz dpkg-source: info: unpacking libtfbs-perl_0.7.1-3.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying hardening.patch dpkg-source: info: applying spelling-errors.patch I: using fakeroot in build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/647060/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='amd64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=20 ' DISTRIBUTION='bullseye' HOME='/root' HOST_ARCH='amd64' IFS=' ' INVOCATION_ID='2ef41aa264f24abfa45c0979b22b63eb' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='647060' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.jx7FiKVg/pbuilderrc_hxAn --distribution bullseye --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.jx7FiKVg/b1 --logfile b1/build.log libtfbs-perl_0.7.1-3.dsc' SUDO_GID='111' SUDO_UID='106' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://46.16.76.132:3128' I: uname -a Linux ionos11-amd64 6.1.0-23-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.99-1 (2024-07-15) x86_64 GNU/Linux I: ls -l /bin total 5476 -rwxr-xr-x 1 root root 1234376 Mar 27 2022 bash -rwxr-xr-x 3 root root 38984 Jul 20 2020 bunzip2 -rwxr-xr-x 3 root root 38984 Jul 20 2020 bzcat lrwxrwxrwx 1 root root 6 Jul 20 2020 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2225 Jul 20 2020 bzdiff lrwxrwxrwx 1 root root 6 Jul 20 2020 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4877 Sep 4 2019 bzexe lrwxrwxrwx 1 root root 6 Jul 20 2020 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3775 Jul 20 2020 bzgrep -rwxr-xr-x 3 root root 38984 Jul 20 2020 bzip2 -rwxr-xr-x 1 root root 18424 Jul 20 2020 bzip2recover lrwxrwxrwx 1 root root 6 Jul 20 2020 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Jul 20 2020 bzmore -rwxr-xr-x 1 root root 43936 Sep 23 2020 cat -rwxr-xr-x 1 root root 72672 Sep 23 2020 chgrp -rwxr-xr-x 1 root root 64448 Sep 23 2020 chmod -rwxr-xr-x 1 root root 72672 Sep 23 2020 chown -rwxr-xr-x 1 root root 151168 Sep 23 2020 cp -rwxr-xr-x 1 root root 125560 Dec 10 2020 dash -rwxr-xr-x 1 root root 113664 Sep 23 2020 date -rwxr-xr-x 1 root root 80968 Sep 23 2020 dd -rwxr-xr-x 1 root root 93936 Sep 23 2020 df -rwxr-xr-x 1 root root 147176 Sep 23 2020 dir -rwxr-xr-x 1 root root 84440 Mar 27 22:09 dmesg lrwxrwxrwx 1 root root 8 Nov 6 2019 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Nov 6 2019 domainname -> hostname -rwxr-xr-x 1 root root 39712 Sep 23 2020 echo -rwxr-xr-x 1 root root 28 Jan 24 2023 egrep -rwxr-xr-x 1 root root 39680 Sep 23 2020 false -rwxr-xr-x 1 root root 28 Jan 24 2023 fgrep -rwxr-xr-x 1 root root 69032 Mar 27 22:09 findmnt -rwsr-xr-x 1 root root 34896 Feb 26 2021 fusermount -rwxr-xr-x 1 root root 203072 Jan 24 2023 grep -rwxr-xr-x 2 root root 2346 Apr 9 2022 gunzip -rwxr-xr-x 1 root root 6447 Apr 9 2022 gzexe -rwxr-xr-x 1 root root 98048 Apr 9 2022 gzip -rwxr-xr-x 1 root root 22600 Nov 6 2019 hostname -rwxr-xr-x 1 root root 72840 Sep 23 2020 ln -rwxr-xr-x 1 root root 56952 Feb 7 2020 login -rwxr-xr-x 1 root root 147176 Sep 23 2020 ls -rwxr-xr-x 1 root root 149736 Mar 27 22:09 lsblk -rwxr-xr-x 1 root root 85184 Sep 23 2020 mkdir -rwxr-xr-x 1 root root 76896 Sep 23 2020 mknod -rwxr-xr-x 1 root root 48064 Sep 23 2020 mktemp -rwxr-xr-x 1 root root 59632 Mar 27 22:09 more -rwsr-xr-x 1 root root 55528 Mar 27 22:09 mount -rwxr-xr-x 1 root root 18664 Mar 27 22:09 mountpoint -rwxr-xr-x 1 root root 147080 Sep 23 2020 mv lrwxrwxrwx 1 root root 8 Nov 6 2019 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Dec 16 2021 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 43872 Sep 23 2020 pwd lrwxrwxrwx 1 root root 4 Mar 27 2022 rbash -> bash -rwxr-xr-x 1 root root 52032 Sep 23 2020 readlink -rwxr-xr-x 1 root root 72704 Sep 23 2020 rm -rwxr-xr-x 1 root root 52032 Sep 23 2020 rmdir -rwxr-xr-x 1 root root 27472 Sep 27 2020 run-parts -rwxr-xr-x 1 root root 122224 Dec 22 2018 sed lrwxrwxrwx 1 root root 4 Jul 6 21:26 sh -> dash -rwxr-xr-x 1 root root 43808 Sep 23 2020 sleep -rwxr-xr-x 1 root root 84928 Sep 23 2020 stty -rwsr-xr-x 1 root root 71912 Mar 27 22:09 su -rwxr-xr-x 1 root root 39744 Sep 23 2020 sync -rwxr-xr-x 1 root root 531928 Jan 19 2024 tar -rwxr-xr-x 1 root root 14456 Sep 27 2020 tempfile -rwxr-xr-x 1 root root 101408 Sep 23 2020 touch -rwxr-xr-x 1 root root 39680 Sep 23 2020 true -rwxr-xr-x 1 root root 14328 Feb 26 2021 ulockmgr_server -rwsr-xr-x 1 root root 35040 Mar 27 22:09 umount -rwxr-xr-x 1 root root 39744 Sep 23 2020 uname -rwxr-xr-x 2 root root 2346 Apr 9 2022 uncompress -rwxr-xr-x 1 root root 147176 Sep 23 2020 vdir -rwxr-xr-x 1 root root 63744 Mar 27 22:09 wdctl lrwxrwxrwx 1 root root 8 Nov 6 2019 ypdomainname -> hostname -rwxr-xr-x 1 root root 1984 Apr 9 2022 zcat -rwxr-xr-x 1 root root 1678 Apr 9 2022 zcmp -rwxr-xr-x 1 root root 5898 Apr 9 2022 zdiff -rwxr-xr-x 1 root root 29 Apr 9 2022 zegrep -rwxr-xr-x 1 root root 29 Apr 9 2022 zfgrep -rwxr-xr-x 1 root root 2081 Apr 9 2022 zforce -rwxr-xr-x 1 root root 8049 Apr 9 2022 zgrep -rwxr-xr-x 1 root root 2206 Apr 9 2022 zless -rwxr-xr-x 1 root root 1842 Apr 9 2022 zmore -rwxr-xr-x 1 root root 4577 Apr 9 2022 znew I: user script /srv/workspace/pbuilder/647060/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 12), perl, pdl (>= 1:2.016), bioperl, libwww-perl, libdbi-perl dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19711 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 12); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on pdl (>= 1:2.016); however: Package pdl is not installed. pbuilder-satisfydepends-dummy depends on bioperl; however: Package bioperl is not installed. pbuilder-satisfydepends-dummy depends on libwww-perl; however: Package libwww-perl is not installed. pbuilder-satisfydepends-dummy depends on libdbi-perl; however: Package libdbi-perl is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bioperl{a} bsdextrautils{a} ca-certificates{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} fontconfig-config{a} fonts-dejavu-core{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libalgorithm-diff-perl{a} libarchive-zip-perl{a} libbio-perl-perl{a} libbrotli1{a} libbsd0{a} libcapture-tiny-perl{a} libclass-data-inheritable-perl{a} libdata-stag-perl{a} libdbi-perl{a} libdebhelper-perl{a} libdeflate0{a} libdevel-stacktrace-perl{a} libelf1{a} libencode-locale-perl{a} libexception-class-perl{a} libexpat1{a} libfile-listing-perl{a} libfile-stripnondeterminism-perl{a} libfontconfig1{a} libfreetype6{a} libgd3{a} libgfortran5{a} libgsl25{a} libgslcblas0{a} libhdf4-0-alt{a} libhtml-parser-perl{a} libhtml-tagset-perl{a} libhtml-tree-perl{a} libhttp-cookies-perl{a} libhttp-date-perl{a} libhttp-message-perl{a} libhttp-negotiate-perl{a} libicu67{a} libio-html-perl{a} libio-socket-ssl-perl{a} libio-string-perl{a} libjbig0{a} libjpeg62-turbo{a} liblwp-mediatypes-perl{a} liblwp-protocol-https-perl{a} libmagic-mgc{a} libmagic1{a} libmd0{a} libncurses6{a} libnet-http-perl{a} libnet-ssleay-perl{a} libpipeline1{a} libpng16-16{a} libpod-parser-perl{a} libsigsegv2{a} libsub-override-perl{a} libsub-uplevel-perl{a} libterm-readkey-perl{a} libtest-deep-perl{a} libtest-differences-perl{a} libtest-exception-perl{a} libtest-most-perl{a} libtest-warn-perl{a} libtext-diff-perl{a} libtiff5{a} libtimedate-perl{a} libtool{a} libtry-tiny-perl{a} libuchardet0{a} liburi-perl{a} libwebp6{a} libwww-perl{a} libwww-robotrules-perl{a} libx11-6{a} libx11-data{a} libxau6{a} libxcb1{a} libxdmcp6{a} libxml2{a} libxpm4{a} m4{a} man-db{a} netbase{a} openssl{a} pdl{a} perl-openssl-defaults{a} po-debconf{a} sensible-utils{a} ucf{a} The following packages are RECOMMENDED but will NOT be installed: bioperl-run curl libace-perl libalgorithm-diff-xs-perl libalgorithm-munkres-perl libapache-dbi-perl libarchive-cpio-perl libarray-compare-perl libbio-asn1-entrezgene-perl libbio-perl-run-perl libcache-cache-perl libclone-perl libconvert-binary-c-perl libdata-dump-perl libdbd-mysql-perl libdbd-pg-perl libdbd-sqlite3-perl libgd-perl libgpm2 libgraph-perl libgraphviz-perl libhtml-form-perl libhtml-format-perl libhtml-tableextract-perl libhttp-daemon-perl liblist-moreutils-perl libltdl-dev libmail-sendmail-perl libmailtools-perl libmldbm-perl libpostscript-perl libset-scalar-perl libsoap-lite-perl libsort-naturally-perl libspreadsheet-parseexcel-perl libspreadsheet-writeexcel-perl libsvg-graph-perl libsvg-perl libterm-readline-gnu-perl libterm-readline-perl-perl libxml-dom-xpath-perl libxml-libxml-perl libxml-libxslt-perl libxml-parser-perl libxml-perl libxml-sax-perl libxml-sax-writer-perl libxml-simple-perl libxml-twig-perl libxml-writer-perl libyaml-perl lynx perl-doc perl-tk wget 0 packages upgraded, 102 newly installed, 0 to remove and 0 not upgraded. Need to get 36.3 MB of archives. After unpacking 123 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian bullseye/main amd64 bsdextrautils amd64 2.36.1-8+deb11u2 [146 kB] Get: 2 http://deb.debian.org/debian bullseye/main amd64 libuchardet0 amd64 0.0.7-1 [67.8 kB] Get: 3 http://deb.debian.org/debian bullseye/main amd64 groff-base amd64 1.22.4-6 [936 kB] Get: 4 http://deb.debian.org/debian bullseye/main amd64 libpipeline1 amd64 1.5.3-1 [34.3 kB] Get: 5 http://deb.debian.org/debian bullseye/main amd64 man-db amd64 2.9.4-2 [1354 kB] Get: 6 http://deb.debian.org/debian bullseye/main amd64 libterm-readkey-perl amd64 2.38-1+b2 [27.8 kB] Get: 7 http://deb.debian.org/debian bullseye/main amd64 libpod-parser-perl all 1.63-2 [96.1 kB] Get: 8 http://deb.debian.org/debian bullseye/main amd64 sensible-utils all 0.0.14 [14.8 kB] Get: 9 http://deb.debian.org/debian bullseye/main amd64 libexpat1 amd64 2.2.10-2+deb11u5 [98.2 kB] Get: 10 http://deb.debian.org/debian bullseye/main amd64 libbrotli1 amd64 1.0.9-2+b2 [279 kB] Get: 11 http://deb.debian.org/debian bullseye/main amd64 libpng16-16 amd64 1.6.37-3 [294 kB] Get: 12 http://deb.debian.org/debian bullseye/main amd64 libfreetype6 amd64 2.10.4+dfsg-1+deb11u1 [418 kB] Get: 13 http://deb.debian.org/debian bullseye/main amd64 ucf all 3.0043 [74.0 kB] Get: 14 http://deb.debian.org/debian bullseye/main amd64 fonts-dejavu-core all 2.37-2 [1069 kB] Get: 15 http://deb.debian.org/debian bullseye/main amd64 fontconfig-config all 2.13.1-4.2 [281 kB] Get: 16 http://deb.debian.org/debian bullseye/main amd64 libfontconfig1 amd64 2.13.1-4.2 [347 kB] Get: 17 http://deb.debian.org/debian bullseye/main amd64 libjpeg62-turbo amd64 1:2.0.6-4 [151 kB] Get: 18 http://deb.debian.org/debian bullseye/main amd64 libdeflate0 amd64 1.7-1 [53.1 kB] Get: 19 http://deb.debian.org/debian bullseye/main amd64 libjbig0 amd64 2.1-3.1+b2 [31.0 kB] Get: 20 http://deb.debian.org/debian bullseye/main amd64 libwebp6 amd64 0.6.1-2.1+deb11u2 [259 kB] Get: 21 http://deb.debian.org/debian bullseye/main amd64 libtiff5 amd64 4.2.0-1+deb11u5 [290 kB] Get: 22 http://deb.debian.org/debian bullseye/main amd64 libxau6 amd64 1:1.0.9-1 [19.7 kB] Get: 23 http://deb.debian.org/debian bullseye/main amd64 libmd0 amd64 1.0.3-3 [28.0 kB] Get: 24 http://deb.debian.org/debian bullseye/main amd64 libbsd0 amd64 0.11.3-1+deb11u1 [108 kB] Get: 25 http://deb.debian.org/debian bullseye/main amd64 libxdmcp6 amd64 1:1.1.2-3 [26.3 kB] Get: 26 http://deb.debian.org/debian bullseye/main amd64 libxcb1 amd64 1.14-3 [140 kB] Get: 27 http://deb.debian.org/debian bullseye/main amd64 libx11-data all 2:1.7.2-1+deb11u2 [311 kB] Get: 28 http://deb.debian.org/debian bullseye/main amd64 libx11-6 amd64 2:1.7.2-1+deb11u2 [772 kB] Get: 29 http://deb.debian.org/debian bullseye/main amd64 libxpm4 amd64 1:3.5.12-1.1+deb11u1 [50.0 kB] Get: 30 http://deb.debian.org/debian bullseye/main amd64 libgd3 amd64 2.3.0-2 [137 kB] Get: 31 http://deb.debian.org/debian bullseye/main amd64 libgfortran5 amd64 10.2.1-6 [727 kB] Get: 32 http://deb.debian.org/debian bullseye/main amd64 libgslcblas0 amd64 2.6+dfsg-2 [102 kB] Get: 33 http://deb.debian.org/debian bullseye/main amd64 libgsl25 amd64 2.6+dfsg-2 [934 kB] Get: 34 http://deb.debian.org/debian bullseye/main amd64 libhdf4-0-alt amd64 4.2.15-3 [278 kB] Get: 35 http://deb.debian.org/debian bullseye/main amd64 libncurses6 amd64 6.2+20201114-2+deb11u2 [102 kB] Get: 36 http://deb.debian.org/debian bullseye/main amd64 pdl amd64 1:2.025-1 [3576 kB] Get: 37 http://deb.debian.org/debian bullseye/main amd64 netbase all 6.3 [19.9 kB] Get: 38 http://deb.debian.org/debian bullseye/main amd64 openssl amd64 1.1.1w-0+deb11u1 [859 kB] Get: 39 http://deb.debian.org/debian bullseye/main amd64 ca-certificates all 20210119 [158 kB] Get: 40 http://deb.debian.org/debian bullseye/main amd64 libmagic-mgc amd64 1:5.39-3+deb11u1 [273 kB] Get: 41 http://deb.debian.org/debian bullseye/main amd64 libmagic1 amd64 1:5.39-3+deb11u1 [128 kB] Get: 42 http://deb.debian.org/debian bullseye/main amd64 file amd64 1:5.39-3+deb11u1 [69.2 kB] Get: 43 http://deb.debian.org/debian bullseye/main amd64 gettext-base amd64 0.21-4 [175 kB] Get: 44 http://deb.debian.org/debian bullseye/main amd64 libsigsegv2 amd64 2.13-1 [34.8 kB] Get: 45 http://deb.debian.org/debian bullseye/main amd64 m4 amd64 1.4.18-5 [204 kB] Get: 46 http://deb.debian.org/debian bullseye/main amd64 autoconf all 2.69-14 [313 kB] Get: 47 http://deb.debian.org/debian bullseye/main amd64 autotools-dev all 20180224.1+nmu1 [77.1 kB] Get: 48 http://deb.debian.org/debian bullseye/main amd64 automake all 1:1.16.3-2 [814 kB] Get: 49 http://deb.debian.org/debian bullseye/main amd64 autopoint all 0.21-4 [510 kB] Get: 50 http://deb.debian.org/debian bullseye/main amd64 libio-string-perl all 1.08-3.1 [11.8 kB] Get: 51 http://deb.debian.org/debian bullseye/main amd64 libdata-stag-perl all 0.14-2 [448 kB] Get: 52 http://deb.debian.org/debian bullseye/main amd64 libbio-perl-perl all 1.7.7-2 [2607 kB] Get: 53 http://deb.debian.org/debian bullseye/main amd64 libclass-data-inheritable-perl all 0.08-3 [8588 B] Get: 54 http://deb.debian.org/debian bullseye/main amd64 libdevel-stacktrace-perl all 2.0400-1 [28.6 kB] Get: 55 http://deb.debian.org/debian bullseye/main amd64 libexception-class-perl all 1.44-1 [32.3 kB] Get: 56 http://deb.debian.org/debian bullseye/main amd64 libtest-deep-perl all 1.130-1 [49.3 kB] Get: 57 http://deb.debian.org/debian bullseye/main amd64 libcapture-tiny-perl all 0.48-1 [26.0 kB] Get: 58 http://deb.debian.org/debian bullseye/main amd64 libalgorithm-diff-perl all 1.201-1 [43.3 kB] Get: 59 http://deb.debian.org/debian bullseye/main amd64 libtext-diff-perl all 1.45-1 [27.7 kB] Get: 60 http://deb.debian.org/debian bullseye/main amd64 libtest-differences-perl all 0.67-1 [18.7 kB] Get: 61 http://deb.debian.org/debian bullseye/main amd64 libsub-uplevel-perl all 0.2800-1.1 [16.5 kB] Get: 62 http://deb.debian.org/debian bullseye/main amd64 libtest-exception-perl all 0.43-1 [18.7 kB] Get: 63 http://deb.debian.org/debian bullseye/main amd64 libtest-warn-perl all 0.36-1 [16.2 kB] Get: 64 http://deb.debian.org/debian bullseye/main amd64 libtest-most-perl all 0.37-1 [24.9 kB] Get: 65 http://deb.debian.org/debian bullseye/main amd64 bioperl all 1.7.7-2 [246 kB] Get: 66 http://deb.debian.org/debian bullseye/main amd64 libdebhelper-perl all 13.3.4 [189 kB] Get: 67 http://deb.debian.org/debian bullseye/main amd64 libtool all 2.4.6-15 [513 kB] Get: 68 http://deb.debian.org/debian bullseye/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 69 http://deb.debian.org/debian bullseye/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 70 http://deb.debian.org/debian bullseye/main amd64 libsub-override-perl all 0.09-2 [10.2 kB] Get: 71 http://deb.debian.org/debian bullseye/main amd64 libfile-stripnondeterminism-perl all 1.12.0-1 [26.3 kB] Get: 72 http://deb.debian.org/debian bullseye/main amd64 dh-strip-nondeterminism all 1.12.0-1 [15.4 kB] Get: 73 http://deb.debian.org/debian bullseye/main amd64 libelf1 amd64 0.183-1 [165 kB] Get: 74 http://deb.debian.org/debian bullseye/main amd64 dwz amd64 0.13+20210201-1 [175 kB] Get: 75 http://deb.debian.org/debian bullseye/main amd64 libicu67 amd64 67.1-7 [8622 kB] Get: 76 http://deb.debian.org/debian bullseye/main amd64 libxml2 amd64 2.9.10+dfsg-6.7+deb11u4 [693 kB] Get: 77 http://deb.debian.org/debian bullseye/main amd64 gettext amd64 0.21-4 [1311 kB] Get: 78 http://deb.debian.org/debian bullseye/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get: 79 http://deb.debian.org/debian bullseye/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 80 http://deb.debian.org/debian bullseye/main amd64 debhelper all 13.3.4 [1049 kB] Get: 81 http://deb.debian.org/debian bullseye/main amd64 libdbi-perl amd64 1.643-3+b1 [780 kB] Get: 82 http://deb.debian.org/debian bullseye/main amd64 libencode-locale-perl all 1.05-1.1 [13.2 kB] Get: 83 http://deb.debian.org/debian bullseye/main amd64 libtimedate-perl all 2.3300-2 [39.3 kB] Get: 84 http://deb.debian.org/debian bullseye/main amd64 libhttp-date-perl all 6.05-1 [10.4 kB] Get: 85 http://deb.debian.org/debian bullseye/main amd64 libfile-listing-perl all 6.14-1 [12.4 kB] Get: 86 http://deb.debian.org/debian bullseye/main amd64 libhtml-tagset-perl all 3.20-4 [13.0 kB] Get: 87 http://deb.debian.org/debian bullseye/main amd64 liburi-perl all 5.08-1 [90.6 kB] Get: 88 http://deb.debian.org/debian bullseye/main amd64 libhtml-parser-perl amd64 3.75-1+b1 [105 kB] Get: 89 http://deb.debian.org/debian bullseye/main amd64 libhtml-tree-perl all 5.07-2 [213 kB] Get: 90 http://deb.debian.org/debian bullseye/main amd64 libio-html-perl all 1.004-2 [16.1 kB] Get: 91 http://deb.debian.org/debian bullseye/main amd64 liblwp-mediatypes-perl all 6.04-1 [19.9 kB] Get: 92 http://deb.debian.org/debian bullseye/main amd64 libhttp-message-perl all 6.28-1 [79.6 kB] Get: 93 http://deb.debian.org/debian bullseye/main amd64 libhttp-cookies-perl all 6.10-1 [19.6 kB] Get: 94 http://deb.debian.org/debian bullseye/main amd64 libhttp-negotiate-perl all 6.01-1 [12.8 kB] Get: 95 http://deb.debian.org/debian bullseye/main amd64 perl-openssl-defaults amd64 5 [7360 B] Get: 96 http://deb.debian.org/debian bullseye/main amd64 libnet-ssleay-perl amd64 1.88-3+b1 [321 kB] Get: 97 http://deb.debian.org/debian bullseye/main amd64 libio-socket-ssl-perl all 2.069-1 [215 kB] Get: 98 http://deb.debian.org/debian bullseye/main amd64 libnet-http-perl all 6.20-1 [25.1 kB] Get: 99 http://deb.debian.org/debian bullseye/main amd64 libtry-tiny-perl all 0.30-1 [23.3 kB] Get: 100 http://deb.debian.org/debian bullseye/main amd64 libwww-robotrules-perl all 6.02-1 [12.9 kB] Get: 101 http://deb.debian.org/debian bullseye/main amd64 libwww-perl all 6.52-1 [192 kB] Get: 102 http://deb.debian.org/debian bullseye/main amd64 liblwp-protocol-https-perl all 6.10-1 [12.2 kB] Fetched 36.3 MB in 1s (46.2 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package bsdextrautils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19711 files and directories currently installed.) Preparing to unpack .../000-bsdextrautils_2.36.1-8+deb11u2_amd64.deb ... Unpacking bsdextrautils (2.36.1-8+deb11u2) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../001-libuchardet0_0.0.7-1_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../002-groff-base_1.22.4-6_amd64.deb ... Unpacking groff-base (1.22.4-6) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../003-libpipeline1_1.5.3-1_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.3-1) ... Selecting previously unselected package man-db. Preparing to unpack .../004-man-db_2.9.4-2_amd64.deb ... Unpacking man-db (2.9.4-2) ... Selecting previously unselected package libterm-readkey-perl. Preparing to unpack .../005-libterm-readkey-perl_2.38-1+b2_amd64.deb ... Unpacking libterm-readkey-perl (2.38-1+b2) ... Selecting previously unselected package libpod-parser-perl. Preparing to unpack .../006-libpod-parser-perl_1.63-2_all.deb ... Adding 'diversion of /usr/bin/podselect to /usr/bin/podselect.bundled by libpod-parser-perl' Adding 'diversion of /usr/share/man/man1/podselect.1.gz to /usr/share/man/man1/podselect.bundled.1.gz by libpod-parser-perl' Unpacking libpod-parser-perl (1.63-2) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../007-sensible-utils_0.0.14_all.deb ... Unpacking sensible-utils (0.0.14) ... Selecting previously unselected package libexpat1:amd64. Preparing to unpack .../008-libexpat1_2.2.10-2+deb11u5_amd64.deb ... Unpacking libexpat1:amd64 (2.2.10-2+deb11u5) ... Selecting previously unselected package libbrotli1:amd64. Preparing to unpack .../009-libbrotli1_1.0.9-2+b2_amd64.deb ... Unpacking libbrotli1:amd64 (1.0.9-2+b2) ... Selecting previously unselected package libpng16-16:amd64. Preparing to unpack .../010-libpng16-16_1.6.37-3_amd64.deb ... Unpacking libpng16-16:amd64 (1.6.37-3) ... Selecting previously unselected package libfreetype6:amd64. Preparing to unpack .../011-libfreetype6_2.10.4+dfsg-1+deb11u1_amd64.deb ... Unpacking libfreetype6:amd64 (2.10.4+dfsg-1+deb11u1) ... Selecting previously unselected package ucf. Preparing to unpack .../012-ucf_3.0043_all.deb ... Moving old data out of the way Unpacking ucf (3.0043) ... Selecting previously unselected package fonts-dejavu-core. Preparing to unpack .../013-fonts-dejavu-core_2.37-2_all.deb ... Unpacking fonts-dejavu-core (2.37-2) ... Selecting previously unselected package fontconfig-config. Preparing to unpack .../014-fontconfig-config_2.13.1-4.2_all.deb ... Unpacking fontconfig-config (2.13.1-4.2) ... Selecting previously unselected package libfontconfig1:amd64. Preparing to unpack .../015-libfontconfig1_2.13.1-4.2_amd64.deb ... Unpacking libfontconfig1:amd64 (2.13.1-4.2) ... Selecting previously unselected package libjpeg62-turbo:amd64. Preparing to unpack .../016-libjpeg62-turbo_1%3a2.0.6-4_amd64.deb ... Unpacking libjpeg62-turbo:amd64 (1:2.0.6-4) ... Selecting previously unselected package libdeflate0:amd64. Preparing to unpack .../017-libdeflate0_1.7-1_amd64.deb ... Unpacking libdeflate0:amd64 (1.7-1) ... Selecting previously unselected package libjbig0:amd64. Preparing to unpack .../018-libjbig0_2.1-3.1+b2_amd64.deb ... Unpacking libjbig0:amd64 (2.1-3.1+b2) ... Selecting previously unselected package libwebp6:amd64. Preparing to unpack .../019-libwebp6_0.6.1-2.1+deb11u2_amd64.deb ... Unpacking libwebp6:amd64 (0.6.1-2.1+deb11u2) ... Selecting previously unselected package libtiff5:amd64. Preparing to unpack .../020-libtiff5_4.2.0-1+deb11u5_amd64.deb ... Unpacking libtiff5:amd64 (4.2.0-1+deb11u5) ... Selecting previously unselected package libxau6:amd64. Preparing to unpack .../021-libxau6_1%3a1.0.9-1_amd64.deb ... Unpacking libxau6:amd64 (1:1.0.9-1) ... Selecting previously unselected package libmd0:amd64. Preparing to unpack .../022-libmd0_1.0.3-3_amd64.deb ... Unpacking libmd0:amd64 (1.0.3-3) ... Selecting previously unselected package libbsd0:amd64. Preparing to unpack .../023-libbsd0_0.11.3-1+deb11u1_amd64.deb ... Unpacking libbsd0:amd64 (0.11.3-1+deb11u1) ... Selecting previously unselected package libxdmcp6:amd64. Preparing to unpack .../024-libxdmcp6_1%3a1.1.2-3_amd64.deb ... Unpacking libxdmcp6:amd64 (1:1.1.2-3) ... Selecting previously unselected package libxcb1:amd64. Preparing to unpack .../025-libxcb1_1.14-3_amd64.deb ... Unpacking libxcb1:amd64 (1.14-3) ... Selecting previously unselected package libx11-data. Preparing to unpack .../026-libx11-data_2%3a1.7.2-1+deb11u2_all.deb ... Unpacking libx11-data (2:1.7.2-1+deb11u2) ... Selecting previously unselected package libx11-6:amd64. Preparing to unpack .../027-libx11-6_2%3a1.7.2-1+deb11u2_amd64.deb ... Unpacking libx11-6:amd64 (2:1.7.2-1+deb11u2) ... Selecting previously unselected package libxpm4:amd64. Preparing to unpack .../028-libxpm4_1%3a3.5.12-1.1+deb11u1_amd64.deb ... Unpacking libxpm4:amd64 (1:3.5.12-1.1+deb11u1) ... Selecting previously unselected package libgd3:amd64. Preparing to unpack .../029-libgd3_2.3.0-2_amd64.deb ... Unpacking libgd3:amd64 (2.3.0-2) ... Selecting previously unselected package libgfortran5:amd64. Preparing to unpack .../030-libgfortran5_10.2.1-6_amd64.deb ... Unpacking libgfortran5:amd64 (10.2.1-6) ... Selecting previously unselected package libgslcblas0:amd64. Preparing to unpack .../031-libgslcblas0_2.6+dfsg-2_amd64.deb ... Unpacking libgslcblas0:amd64 (2.6+dfsg-2) ... Selecting previously unselected package libgsl25:amd64. Preparing to unpack .../032-libgsl25_2.6+dfsg-2_amd64.deb ... Unpacking libgsl25:amd64 (2.6+dfsg-2) ... Selecting previously unselected package libhdf4-0-alt. Preparing to unpack .../033-libhdf4-0-alt_4.2.15-3_amd64.deb ... Unpacking libhdf4-0-alt (4.2.15-3) ... Selecting previously unselected package libncurses6:amd64. Preparing to unpack .../034-libncurses6_6.2+20201114-2+deb11u2_amd64.deb ... Unpacking libncurses6:amd64 (6.2+20201114-2+deb11u2) ... Selecting previously unselected package pdl. Preparing to unpack .../035-pdl_1%3a2.025-1_amd64.deb ... Unpacking pdl (1:2.025-1) ... Selecting previously unselected package netbase. Preparing to unpack .../036-netbase_6.3_all.deb ... Unpacking netbase (6.3) ... Selecting previously unselected package openssl. Preparing to unpack .../037-openssl_1.1.1w-0+deb11u1_amd64.deb ... Unpacking openssl (1.1.1w-0+deb11u1) ... Selecting previously unselected package ca-certificates. Preparing to unpack .../038-ca-certificates_20210119_all.deb ... Unpacking ca-certificates (20210119) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../039-libmagic-mgc_1%3a5.39-3+deb11u1_amd64.deb ... Unpacking libmagic-mgc (1:5.39-3+deb11u1) ... Selecting previously unselected package libmagic1:amd64. Preparing to unpack .../040-libmagic1_1%3a5.39-3+deb11u1_amd64.deb ... Unpacking libmagic1:amd64 (1:5.39-3+deb11u1) ... Selecting previously unselected package file. Preparing to unpack .../041-file_1%3a5.39-3+deb11u1_amd64.deb ... Unpacking file (1:5.39-3+deb11u1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../042-gettext-base_0.21-4_amd64.deb ... Unpacking gettext-base (0.21-4) ... Selecting previously unselected package libsigsegv2:amd64. Preparing to unpack .../043-libsigsegv2_2.13-1_amd64.deb ... Unpacking libsigsegv2:amd64 (2.13-1) ... Selecting previously unselected package m4. Preparing to unpack .../044-m4_1.4.18-5_amd64.deb ... Unpacking m4 (1.4.18-5) ... Selecting previously unselected package autoconf. Preparing to unpack .../045-autoconf_2.69-14_all.deb ... Unpacking autoconf (2.69-14) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../046-autotools-dev_20180224.1+nmu1_all.deb ... Unpacking autotools-dev (20180224.1+nmu1) ... Selecting previously unselected package automake. Preparing to unpack .../047-automake_1%3a1.16.3-2_all.deb ... Unpacking automake (1:1.16.3-2) ... Selecting previously unselected package autopoint. Preparing to unpack .../048-autopoint_0.21-4_all.deb ... Unpacking autopoint (0.21-4) ... Selecting previously unselected package libio-string-perl. Preparing to unpack .../049-libio-string-perl_1.08-3.1_all.deb ... Unpacking libio-string-perl (1.08-3.1) ... Selecting previously unselected package libdata-stag-perl. Preparing to unpack .../050-libdata-stag-perl_0.14-2_all.deb ... Unpacking libdata-stag-perl (0.14-2) ... Selecting previously unselected package libbio-perl-perl. Preparing to unpack .../051-libbio-perl-perl_1.7.7-2_all.deb ... Unpacking libbio-perl-perl (1.7.7-2) ... Selecting previously unselected package libclass-data-inheritable-perl. Preparing to unpack .../052-libclass-data-inheritable-perl_0.08-3_all.deb ... Unpacking libclass-data-inheritable-perl (0.08-3) ... Selecting previously unselected package libdevel-stacktrace-perl. Preparing to unpack .../053-libdevel-stacktrace-perl_2.0400-1_all.deb ... Unpacking libdevel-stacktrace-perl (2.0400-1) ... Selecting previously unselected package libexception-class-perl. Preparing to unpack .../054-libexception-class-perl_1.44-1_all.deb ... Unpacking libexception-class-perl (1.44-1) ... Selecting previously unselected package libtest-deep-perl. Preparing to unpack .../055-libtest-deep-perl_1.130-1_all.deb ... Unpacking libtest-deep-perl (1.130-1) ... Selecting previously unselected package libcapture-tiny-perl. Preparing to unpack .../056-libcapture-tiny-perl_0.48-1_all.deb ... Unpacking libcapture-tiny-perl (0.48-1) ... Selecting previously unselected package libalgorithm-diff-perl. Preparing to unpack .../057-libalgorithm-diff-perl_1.201-1_all.deb ... Unpacking libalgorithm-diff-perl (1.201-1) ... Selecting previously unselected package libtext-diff-perl. Preparing to unpack .../058-libtext-diff-perl_1.45-1_all.deb ... Unpacking libtext-diff-perl (1.45-1) ... Selecting previously unselected package libtest-differences-perl. Preparing to unpack .../059-libtest-differences-perl_0.67-1_all.deb ... Unpacking libtest-differences-perl (0.67-1) ... Selecting previously unselected package libsub-uplevel-perl. Preparing to unpack .../060-libsub-uplevel-perl_0.2800-1.1_all.deb ... Unpacking libsub-uplevel-perl (0.2800-1.1) ... Selecting previously unselected package libtest-exception-perl. Preparing to unpack .../061-libtest-exception-perl_0.43-1_all.deb ... Unpacking libtest-exception-perl (0.43-1) ... Selecting previously unselected package libtest-warn-perl. Preparing to unpack .../062-libtest-warn-perl_0.36-1_all.deb ... Unpacking libtest-warn-perl (0.36-1) ... Selecting previously unselected package libtest-most-perl. Preparing to unpack .../063-libtest-most-perl_0.37-1_all.deb ... Unpacking libtest-most-perl (0.37-1) ... Selecting previously unselected package bioperl. Preparing to unpack .../064-bioperl_1.7.7-2_all.deb ... Unpacking bioperl (1.7.7-2) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../065-libdebhelper-perl_13.3.4_all.deb ... Unpacking libdebhelper-perl (13.3.4) ... 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Processing triggers for libc-bin (2.31-13+deb11u10) ... Processing triggers for ca-certificates (20210119) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps Reading package lists... Building dependency tree... Reading state information... fakeroot is already the newest version (1.25.3-1.1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package I: Running cd /build/reproducible-path/libtfbs-perl-0.7.1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../libtfbs-perl_0.7.1-3_source.changes dpkg-buildpackage: info: source package libtfbs-perl dpkg-buildpackage: info: source version 0.7.1-3 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 fakeroot debian/rules clean dh clean debian/rules override_dh_auto_clean make[1]: Entering directory '/build/reproducible-path/libtfbs-perl-0.7.1' rm --force Makefile Makefile.old make[1]: Leaving directory '/build/reproducible-path/libtfbs-perl-0.7.1' dh_clean debian/rules build dh build dh_update_autotools_config dh_autoreconf debian/rules override_dh_auto_configure make[1]: Entering directory '/build/reproducible-path/libtfbs-perl-0.7.1' echo "n" | perl Makefile.PL INSTALLDIRS=vendor ------------------------------------------------- WARNING ------------------------------------------------- GD.pm does not seem to be installed. GD is reqired to produce "sequence logos" from information content matrices. If you need this functionality, please visit http://stein.cshl.org/WWW/software/GD/ for information on obtaining and installing GD. ------------------------------------------------- Do you have write access to a MySQL database server? [n] Checking if your kit is complete... Warning: the following files are missing in your kit: README Please inform the author. Writing MYMETA.yml and MYMETA.json Generating a Unix-style Makefile Writing Makefile for TFBS Writing MYMETA.yml and MYMETA.json /usr/bin/make OPTIMIZE="-g -O2 -fdebug-prefix-map=/build/reproducible-path/libtfbs-perl-0.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security" LD_RUN_PATH="" OTHERLDFLAGS="-specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now" make[2]: Entering directory '/build/reproducible-path/libtfbs-perl-0.7.1' cp TFBS/Matrix/Alignment.pm blib/lib/TFBS/Matrix/Alignment.pm Skip blib/lib/TFBS/PatternGen/YMF/Motif.pm (unchanged) cp TFBS/DB/JASPAR5.pm blib/lib/TFBS/DB/JASPAR5.pm Skip blib/lib/TFBS/PatternGen/Elph/Motif.pm (unchanged) cp TFBS/PatternGen/AnnSpec.pm blib/lib/TFBS/PatternGen/AnnSpec.pm Skip blib/lib/TFBS/PatternGen/Gibbs.pm (unchanged) cp TFBS/SitePair.pm blib/lib/TFBS/SitePair.pm cp TFBS/DB/JASPAR.pm blib/lib/TFBS/DB/JASPAR.pm Skip blib/lib/TFBS/Site.pm (unchanged) cp TFBS/TFFM.pm blib/lib/TFBS/TFFM.pm cp TFBS/Matrix.pm blib/lib/TFBS/Matrix.pm cp TFBS/DB/JASPAR4.pm blib/lib/TFBS/DB/JASPAR4.pm cp TFBS/DB/TRANSFAC.pm blib/lib/TFBS/DB/TRANSFAC.pm cp TFBS/Run/ConservationProfileGenerator.pm blib/lib/TFBS/Run/ConservationProfileGenerator.pm Skip blib/lib/TFBS/PatternGen/SimplePFM.pm (unchanged) Skip blib/lib/TFBS/DB/LocalTRANSFAC.pm (unchanged) Skip blib/lib/TFBS/Tools/SetOperations.pm (unchanged) Skip blib/lib/TFBS/PatternGen/Motif/Matrix.pm (unchanged) Skip blib/lib/TFBS/PatternGen/Gibbs/Motif.pm (unchanged) Skip blib/lib/TFBS/Matrix/_Alignment.pm (unchanged) cp TFBS/PatternGen.pm blib/lib/TFBS/PatternGen.pm cp TFBS/MatrixSet.pm blib/lib/TFBS/MatrixSet.pm Skip blib/lib/TFBS/PatternGen/MEME.pm (unchanged) Skip blib/lib/TFBS/PatternGen/Elph.pm (unchanged) Skip blib/lib/TFBS/PatternI.pm (unchanged) Skip blib/lib/TFBS/PatternGen/Motif/Word.pm (unchanged) Skip blib/lib/TFBS/PatternGen/AnnSpec/Motif.pm (unchanged) cp TFBS/Matrix/PFM.pm blib/lib/TFBS/Matrix/PFM.pm cp TFBS/PatternGen/YMF.pm blib/lib/TFBS/PatternGen/YMF.pm cp TFBS/README.md blib/lib/TFBS/README.md Skip blib/lib/TFBS/PatternGenI.pm (unchanged) Skip blib/lib/TFBS/SitePairSet.pm (unchanged) cp TFBS/DB/JASPAR6.pm blib/lib/TFBS/DB/JASPAR6.pm cp TFBS/ConservationProfile.pm blib/lib/TFBS/ConservationProfile.pm Skip blib/lib/TFBS/SiteSet.pm (unchanged) Skip blib/lib/TFBS/DB.pm (unchanged) cp TFBS/DB/FlatFileDir.pm blib/lib/TFBS/DB/FlatFileDir.pm Skip blib/lib/TFBS/PatternGen/MEME/Motif.pm (unchanged) Skip blib/lib/TFBS/Matrix/PWM.pm (unchanged) cp TFBS/DB/JASPAR7.pm blib/lib/TFBS/DB/JASPAR7.pm Skip blib/lib/TFBS/DB/JASPAR2.pm (unchanged) cp TFBS/Matrix/ICM.pm blib/lib/TFBS/Matrix/ICM.pm cp TFBS/_Iterator/_MatrixSetIterator.pm blib/lib/TFBS/_Iterator/_MatrixSetIterator.pm cp TFBS/_Iterator/_SiteSetIterator.pm blib/lib/TFBS/_Iterator/_SiteSetIterator.pm Skip blib/lib/TFBS/Word/Consensus.pm (unchanged) Skip blib/lib/TFBS/Word.pm (unchanged) Skip blib/lib/TFBS/_Iterator.pm (unchanged) make[3]: Entering directory '/build/reproducible-path/libtfbs-perl-0.7.1/Ext' Skip ../blib/lib/pwm_search.h (unchanged) Skip ../blib/lib/TFBS/Ext/pwmsearch.pm (unchanged) cp lib/pwm_searchPFF.c ../blib/lib/pwm_searchPFF.c Running Mkbootstrap for pwmsearch () chmod 644 "pwmsearch.bs" "/usr/bin/perl" -MExtUtils::Command::MM -e 'cp_nonempty' -- pwmsearch.bs ../blib/arch/auto/TFBS/Ext/pwmsearch/pwmsearch.bs 644 "/usr/bin/perl" "/usr/share/perl/5.32.1/ExtUtils/xsubpp" -typemap '/usr/share/perl/5.32/ExtUtils/typemap' pwmsearch.xs > pwmsearch.xsc Please specify prototyping behavior for pwmsearch.xs (see perlxs manual) mv pwmsearch.xsc pwmsearch.c x86_64-linux-gnu-gcc -c -I. -I./lib -D_REENTRANT -D_GNU_SOURCE -DDEBIAN -fwrapv -fno-strict-aliasing -pipe -I/usr/local/include -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -g -O2 -fdebug-prefix-map=/build/reproducible-path/libtfbs-perl-0.7.1=. -specs=/usr/share/dpkg/no-pie-compile.specs -fstack-protector-strong -Wformat -Werror=format-security -DVERSION=\"0.2\" -DXS_VERSION=\"0.2\" -fPIC "-I/usr/lib/x86_64-linux-gnu/perl/5.32/CORE" pwmsearch.c In file included from pwmsearch.xs:4: ./lib/pwm_searchPFF.c: In function 'do_search': ./lib/pwm_searchPFF.c:55:7: warning: implicit declaration of function 'announce' [-Wimplicit-function-declaration] 55 | announce("+++\nEntering main.\n+++\n"); | ^~~~~~~~ ./lib/pwm_searchPFF.c:74:9: warning: implicit declaration of function 'get_matrix' [-Wimplicit-function-declaration] 74 | if ( get_matrix(&args,pwm) ) | ^~~~~~~~~~ ./lib/pwm_searchPFF.c:90:14: warning: implicit declaration of function 'loop_on_seqs' [-Wimplicit-function-declaration] 90 | else if ( loop_on_seqs(&args,pwm,fp,outfp) ) | ^~~~~~~~~~~~ ./lib/pwm_searchPFF.c: At top level: ./lib/pwm_searchPFF.c:159:1: warning: return type defaults to 'int' [-Wimplicit-int] 159 | best_pull(pargs,pbase,pstrand,pscore) | ^~~~~~~~~ ./lib/pwm_searchPFF.c: In function 'do_seq': ./lib/pwm_searchPFF.c:229:18: warning: implicit declaration of function 'save_hit'; did you mean 'save_list'? [-Wimplicit-function-declaration] 229 | if ( save_hit(base,0,forward_score,hits,&nhit) ) | ^~~~~~~~ | save_list ./lib/pwm_searchPFF.c:239:20: warning: implicit declaration of function 'output' [-Wimplicit-function-declaration] 239 | else if ( output(pargs,seqid,base,seq,0,forward_score,outfp) ) | ^~~~~~ ./lib/pwm_searchPFF.c: At top level: ./lib/pwm_searchPFF.c:526:1: warning: return type defaults to 'int' [-Wimplicit-int] 526 | get_sequence(fp,seq_id,sequence) | ^~~~~~~~~~~~ rm -f ../blib/arch/auto/TFBS/Ext/pwmsearch/pwmsearch.so x86_64-linux-gnu-gcc -shared -L/usr/local/lib -fstack-protector-strong pwmsearch.o -specs=/usr/share/dpkg/no-pie-link.specs -Wl,-z,relro -Wl,-z,now -o ../blib/arch/auto/TFBS/Ext/pwmsearch/pwmsearch.so \ -lm \ chmod 755 ../blib/arch/auto/TFBS/Ext/pwmsearch/pwmsearch.so Manifying 1 pod document make[3]: Leaving directory '/build/reproducible-path/libtfbs-perl-0.7.1/Ext' Manifying 35 pod documents make[2]: Leaving directory '/build/reproducible-path/libtfbs-perl-0.7.1' make[1]: Leaving directory '/build/reproducible-path/libtfbs-perl-0.7.1' dh_auto_build make -j20 make[1]: Entering directory '/build/reproducible-path/libtfbs-perl-0.7.1' make[2]: Entering directory '/build/reproducible-path/libtfbs-perl-0.7.1/Ext' "/usr/bin/perl" -MExtUtils::Command::MM -e 'cp_nonempty' -- pwmsearch.bs ../blib/arch/auto/TFBS/Ext/pwmsearch/pwmsearch.bs 644 Manifying 1 pod document make[2]: Leaving directory '/build/reproducible-path/libtfbs-perl-0.7.1/Ext' Manifying 35 pod documents make[1]: Leaving directory '/build/reproducible-path/libtfbs-perl-0.7.1' debian/rules override_dh_auto_test make[1]: Entering directory '/build/reproducible-path/libtfbs-perl-0.7.1' prove --blib t/01_Matrix.t t/02_Search.t t/03_DB_FlatFileDir.t t/05_DB_JASPAR.t t/06_SimplePFM.t t/07_AnnSpec.t t/07_Elph.t t/07_Gibbs.t t/07_MEME.t t/08_DB_LocalTRANSFAC.t t/09_Word_Consensus.t t/10_Tools_SetOperations.t Ext/t/*.t Possible precedence issue with control flow operator at /build/reproducible-path/libtfbs-perl-0.7.1/blib/lib/TFBS/Matrix/_Alignment.pm line 152, line 209. t/01_Matrix.t ............... ok Possible precedence issue with control flow operator at /build/reproducible-path/libtfbs-perl-0.7.1/blib/lib/TFBS/Matrix/_Alignment.pm line 152, line 209. t/02_Search.t ............... ok Possible precedence issue with control flow operator at /build/reproducible-path/libtfbs-perl-0.7.1/blib/lib/TFBS/Matrix/_Alignment.pm line 152, line 209. t/03_DB_FlatFileDir.t ....... ok Possible precedence issue with control flow operator at /build/reproducible-path/libtfbs-perl-0.7.1/blib/lib/TFBS/Matrix/_Alignment.pm line 152, line 209. t/05_DB_JASPAR.t ............ ok Possible precedence issue with control flow operator at /build/reproducible-path/libtfbs-perl-0.7.1/blib/lib/TFBS/Matrix/_Alignment.pm line 152, line 209. t/06_SimplePFM.t ............ ok Possible precedence issue with control flow operator at /build/reproducible-path/libtfbs-perl-0.7.1/blib/lib/TFBS/Matrix/_Alignment.pm line 152, line 209. t/07_AnnSpec.t .............. ok Possible precedence issue with control flow operator at /build/reproducible-path/libtfbs-perl-0.7.1/blib/lib/TFBS/Matrix/_Alignment.pm line 152, line 209. t/07_Elph.t ................. ok Possible precedence issue with control flow operator at /build/reproducible-path/libtfbs-perl-0.7.1/blib/lib/TFBS/Matrix/_Alignment.pm line 152, line 209. t/07_Gibbs.t ................ ok Possible precedence issue with control flow operator at /build/reproducible-path/libtfbs-perl-0.7.1/blib/lib/TFBS/Matrix/_Alignment.pm line 152, line 209. t/07_MEME.t ................. ok Possible precedence issue with control flow operator at /build/reproducible-path/libtfbs-perl-0.7.1/blib/lib/TFBS/Matrix/_Alignment.pm line 152, line 209. t/08_DB_LocalTRANSFAC.t ..... ok Possible precedence issue with control flow operator at /build/reproducible-path/libtfbs-perl-0.7.1/blib/lib/TFBS/Matrix/_Alignment.pm line 152, line 209. t/09_Word_Consensus.t ....... ok Possible precedence issue with control flow operator at /build/reproducible-path/libtfbs-perl-0.7.1/blib/lib/TFBS/Matrix/_Alignment.pm line 152, line 209. t/10_Tools_SetOperations.t .. ok Ext/t/pwmsearch.t ........... ok All tests successful. Files=13, Tests=45, 5 wallclock secs ( 0.07 usr 0.04 sys + 4.08 cusr 0.54 csys = 4.73 CPU) Result: PASS make[1]: Leaving directory '/build/reproducible-path/libtfbs-perl-0.7.1' create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary dh binary dh_testroot dh_prep dh_auto_install make -j20 install DESTDIR=/build/reproducible-path/libtfbs-perl-0.7.1/debian/libtfbs-perl AM_UPDATE_INFO_DIR=no PREFIX=/usr make[1]: Entering directory '/build/reproducible-path/libtfbs-perl-0.7.1' make[2]: Entering directory '/build/reproducible-path/libtfbs-perl-0.7.1/Ext' "/usr/bin/perl" -MExtUtils::Command::MM -e 'cp_nonempty' -- pwmsearch.bs ../blib/arch/auto/TFBS/Ext/pwmsearch/pwmsearch.bs 644 Manifying 1 pod document make[2]: Leaving directory '/build/reproducible-path/libtfbs-perl-0.7.1/Ext' Manifying 35 pod documents Files found in blib/arch: installing files in blib/lib into architecture dependent library tree Installing /build/reproducible-path/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.32/auto/TFBS/Ext/pwmsearch/pwmsearch.bundle Installing /build/reproducible-path/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.32/auto/TFBS/Ext/pwmsearch/pwmsearch.so Installing /build/reproducible-path/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.32/pwm_searchPFF.c Installing /build/reproducible-path/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.32/pwm_search.h Installing /build/reproducible-path/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.32/TFBS/SitePairSet.pm Installing /build/reproducible-path/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.32/TFBS/Site.pm Installing /build/reproducible-path/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.32/TFBS/PatternGenI.pm Installing /build/reproducible-path/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.32/TFBS/PatternGen.pm Installing /build/reproducible-path/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.32/TFBS/TFFM.pm Installing /build/reproducible-path/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.32/TFBS/DB.pm Installing /build/reproducible-path/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.32/TFBS/MatrixSet.pm Installing /build/reproducible-path/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.32/TFBS/_Iterator.pm Installing /build/reproducible-path/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.32/TFBS/ConservationProfile.pm Installing /build/reproducible-path/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.32/TFBS/SitePair.pm Installing /build/reproducible-path/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.32/TFBS/PatternI.pm Installing /build/reproducible-path/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.32/TFBS/Matrix.pm Installing /build/reproducible-path/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.32/TFBS/Word.pm Installing /build/reproducible-path/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.32/TFBS/SiteSet.pm Installing /build/reproducible-path/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.32/TFBS/README.md Installing /build/reproducible-path/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.32/TFBS/Tools/SetOperations.pm Installing /build/reproducible-path/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.32/TFBS/Word/Consensus.pm Installing /build/reproducible-path/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.32/TFBS/DB/JASPAR7.pm Installing /build/reproducible-path/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.32/TFBS/DB/LocalTRANSFAC.pm Installing /build/reproducible-path/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.32/TFBS/DB/JASPAR5.pm Installing /build/reproducible-path/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.32/TFBS/DB/JASPAR4.pm Installing /build/reproducible-path/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.32/TFBS/DB/FlatFileDir.pm Installing /build/reproducible-path/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.32/TFBS/DB/JASPAR2.pm Installing /build/reproducible-path/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.32/TFBS/DB/TRANSFAC.pm Installing /build/reproducible-path/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.32/TFBS/DB/JASPAR.pm Installing /build/reproducible-path/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.32/TFBS/DB/JASPAR6.pm Installing /build/reproducible-path/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.32/TFBS/_Iterator/_MatrixSetIterator.pm Installing /build/reproducible-path/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.32/TFBS/_Iterator/_SiteSetIterator.pm Installing /build/reproducible-path/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.32/TFBS/Matrix/ICM.pm Installing /build/reproducible-path/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.32/TFBS/Matrix/_Alignment.pm Installing /build/reproducible-path/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.32/TFBS/Matrix/PWM.pm Installing /build/reproducible-path/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.32/TFBS/Matrix/Alignment.pm Installing /build/reproducible-path/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.32/TFBS/Matrix/PFM.pm Installing /build/reproducible-path/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.32/TFBS/Ext/pwmsearch.pm Installing /build/reproducible-path/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.32/TFBS/Run/ConservationProfileGenerator.pm Installing /build/reproducible-path/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.32/TFBS/PatternGen/SimplePFM.pm Installing /build/reproducible-path/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.32/TFBS/PatternGen/Gibbs.pm Installing /build/reproducible-path/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.32/TFBS/PatternGen/MEME.pm Installing /build/reproducible-path/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.32/TFBS/PatternGen/AnnSpec.pm Installing /build/reproducible-path/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.32/TFBS/PatternGen/Elph.pm Installing /build/reproducible-path/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.32/TFBS/PatternGen/YMF.pm Installing /build/reproducible-path/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.32/TFBS/PatternGen/MEME/Motif.pm Installing /build/reproducible-path/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.32/TFBS/PatternGen/Gibbs/Motif.pm Installing /build/reproducible-path/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.32/TFBS/PatternGen/Elph/Motif.pm Installing /build/reproducible-path/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.32/TFBS/PatternGen/YMF/Motif.pm Installing /build/reproducible-path/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.32/TFBS/PatternGen/AnnSpec/Motif.pm Installing /build/reproducible-path/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.32/TFBS/PatternGen/Motif/Matrix.pm Installing /build/reproducible-path/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/lib/x86_64-linux-gnu/perl5/5.32/TFBS/PatternGen/Motif/Word.pm Installing /build/reproducible-path/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/share/man/man3/TFBS::PatternGen::MEME::Motif.3pm Installing /build/reproducible-path/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/share/man/man3/TFBS::TFFM.3pm Installing /build/reproducible-path/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/share/man/man3/TFBS::DB::JASPAR6.3pm Installing /build/reproducible-path/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/share/man/man3/TFBS::Matrix::PFM.3pm Installing /build/reproducible-path/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/share/man/man3/TFBS::PatternGen::Elph.3pm Installing /build/reproducible-path/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/share/man/man3/TFBS::Matrix.3pm Installing /build/reproducible-path/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/share/man/man3/TFBS::Word.3pm Installing /build/reproducible-path/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/share/man/man3/TFBS::DB::JASPAR7.3pm Installing /build/reproducible-path/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/share/man/man3/TFBS::PatternGen::AnnSpec::Motif.3pm Installing /build/reproducible-path/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/share/man/man3/TFBS::PatternGen::Gibbs.3pm Installing /build/reproducible-path/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/share/man/man3/TFBS::PatternGen::MEME.3pm Installing /build/reproducible-path/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/share/man/man3/TFBS::PatternGen::Elph::Motif.3pm Installing /build/reproducible-path/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/share/man/man3/TFBS::SiteSet.3pm Installing /build/reproducible-path/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/share/man/man3/TFBS::Ext::pwmsearch.3pm Installing /build/reproducible-path/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/share/man/man3/TFBS::MatrixSet.3pm Installing /build/reproducible-path/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/share/man/man3/TFBS::PatternGen::YMF.3pm Installing /build/reproducible-path/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/share/man/man3/TFBS::PatternI.3pm Installing /build/reproducible-path/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/share/man/man3/TFBS::Matrix::Alignment.3pm Installing /build/reproducible-path/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/share/man/man3/TFBS::Matrix::ICM.3pm Installing /build/reproducible-path/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/share/man/man3/TFBS::PatternGen::SimplePFM.3pm Installing /build/reproducible-path/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/share/man/man3/TFBS::Word::Consensus.3pm Installing /build/reproducible-path/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/share/man/man3/TFBS::PatternGen.3pm Installing /build/reproducible-path/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/share/man/man3/TFBS::SitePairSet.3pm Installing /build/reproducible-path/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/share/man/man3/TFBS::DB::LocalTRANSFAC.3pm Installing /build/reproducible-path/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/share/man/man3/TFBS::DB::JASPAR.3pm Installing /build/reproducible-path/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/share/man/man3/TFBS::DB::JASPAR2.3pm Installing /build/reproducible-path/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/share/man/man3/TFBS::DB::FlatFileDir.3pm Installing /build/reproducible-path/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/share/man/man3/TFBS::PatternGen::Gibbs::Motif.3pm Installing /build/reproducible-path/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/share/man/man3/TFBS::PatternGen::AnnSpec.3pm Installing /build/reproducible-path/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/share/man/man3/TFBS::PatternGen::YMF::Motif.3pm Installing /build/reproducible-path/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/share/man/man3/TFBS::Matrix::PWM.3pm Installing /build/reproducible-path/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/share/man/man3/TFBS::Site.3pm Installing /build/reproducible-path/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/share/man/man3/TFBS::DB::TRANSFAC.3pm Installing /build/reproducible-path/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/share/man/man3/TFBS::SitePair.3pm Installing /build/reproducible-path/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/share/man/man3/TFBS::DB::JASPAR4.3pm Installing /build/reproducible-path/libtfbs-perl-0.7.1/debian/libtfbs-perl/usr/share/man/man3/TFBS::DB::JASPAR5.3pm make[1]: Leaving directory '/build/reproducible-path/libtfbs-perl-0.7.1' dh_installdocs dh_installchangelogs debian/rules override_dh_installexamples make[1]: Entering directory '/build/reproducible-path/libtfbs-perl-0.7.1' dh_installexamples mkdir -p debian/libtfbs-perl/usr/share/doc/libtfbs-perl/examples/Ext cp -a Ext/t debian/libtfbs-perl/usr/share/doc/libtfbs-perl/examples/Ext for pl in `grep -Rl '#!/usr/bin/env[[:space:]]\+perl' debian/*/usr/*` ; do \ sed -i '1s?^#!/usr/bin/env[[:space:]]\+perl?#!/usr/bin/perl?' ${pl} ; \ done make[1]: Leaving directory '/build/reproducible-path/libtfbs-perl-0.7.1' dh_installman debian/rules override_dh_perl make[1]: Entering directory '/build/reproducible-path/libtfbs-perl-0.7.1' dh_perl dh_pdl make[1]: Leaving directory '/build/reproducible-path/libtfbs-perl-0.7.1' dh_link dh_strip_nondeterminism dh_compress debian/rules override_dh_fixperms make[1]: Entering directory '/build/reproducible-path/libtfbs-perl-0.7.1' dh_fixperms find debian -name pwmsearch.bundle -exec chmod -x \{\} \; make[1]: Leaving directory '/build/reproducible-path/libtfbs-perl-0.7.1' dh_missing dh_dwz dh_strip dh_makeshlibs dh_shlibdeps dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'libtfbs-perl' in '../libtfbs-perl_0.7.1-3_amd64.deb'. dpkg-deb: building package 'libtfbs-perl-dbgsym' in '../libtfbs-perl-dbgsym_0.7.1-3_amd64.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../libtfbs-perl_0.7.1-3_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/647060 and its subdirectories I: Current time: Sun Aug 4 11:47:41 -12 2024 I: pbuilder-time-stamp: 1722815261 Sun Aug 4 23:47:44 UTC 2024 I: 1st build successful. Starting 2nd build on remote node ionos15-amd64.debian.net. Sun Aug 4 23:47:44 UTC 2024 I: Preparing to do remote build '2' on ionos15-amd64.debian.net. Sun Aug 4 23:49:01 UTC 2024 I: Deleting $TMPDIR on ionos15-amd64.debian.net. Sun Aug 4 23:49:02 UTC 2024 I: libtfbs-perl_0.7.1-3_amd64.changes: Format: 1.8 Date: Thu, 19 Sep 2019 17:34:02 +0200 Source: libtfbs-perl Binary: libtfbs-perl libtfbs-perl-dbgsym Architecture: amd64 Version: 0.7.1-3 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: libtfbs-perl - scanning DNA sequence with a position weight matrix Closes: 940674 Changes: libtfbs-perl (0.7.1-3) unstable; urgency=medium . [ Xavier Guimard ] * Fix autopkgtest control for autodep8+pkg-perl-autopkgtest transition Closes: #940674 . [ Andreas Tille ] * debhelper-compat 12 * Standards-Version: 4.4.0 * Remove trailing whitespace in debian/changelog * Set fields Upstream-Name, Upstream-Contact in debian/copyright. * Remove obsolete fields Name, Contact from debian/upstream/metadata. Checksums-Sha1: 5f63d72534c46b51968cc366f1a1c9778858f3f6 33236 libtfbs-perl-dbgsym_0.7.1-3_amd64.deb 403fc164c4d725504e47f4d8f9f0fab92110082d 7544 libtfbs-perl_0.7.1-3_amd64.buildinfo ef28120dfb269e2b15b0a67b0d023efc826fb8fa 233116 libtfbs-perl_0.7.1-3_amd64.deb Checksums-Sha256: 746a546cffa11e92a9f9defeb03d0b42c7fab5b9b8cd61a2c0ac7b75b1e6d1ba 33236 libtfbs-perl-dbgsym_0.7.1-3_amd64.deb 66a1dd6de374ea665ea384928aebe4dc5705c347d69f450ee10760d002798752 7544 libtfbs-perl_0.7.1-3_amd64.buildinfo 1f5e53f3918564a3c419f236cd23f415f3aa2117ea1d9cfa3690b9d2bb1f4378 233116 libtfbs-perl_0.7.1-3_amd64.deb Files: aeedce20aabdc14149776566d8c560a4 33236 debug optional libtfbs-perl-dbgsym_0.7.1-3_amd64.deb 39e7f2404cd7a30bbfdcc612e54d29d5 7544 perl optional libtfbs-perl_0.7.1-3_amd64.buildinfo dcf22c713fc06eb765de13ff616595b1 233116 perl optional libtfbs-perl_0.7.1-3_amd64.deb Sun Aug 4 23:49:03 UTC 2024 I: diffoscope 272 will be used to compare the two builds: Running as unit: rb-diffoscope-amd64_27-28959.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.jx7FiKVg/libtfbs-perl_0.7.1-3.diffoscope.html --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.jx7FiKVg/b1/libtfbs-perl_0.7.1-3_amd64.changes /srv/reproducible-results/rbuild-debian/r-b-build.jx7FiKVg/b2/libtfbs-perl_0.7.1-3_amd64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.272s) 0.272s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.020s) 0.020s 12 calls diffoscope.comparators.binary.FilesystemFile ## specialize (total time: 0.000s) 0.000s 1 call specialize Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 539ms CPU time consumed: 543ms Sun Aug 4 23:49:04 UTC 2024 I: diffoscope 272 found no differences in the changes files, and a .buildinfo file also exists. Sun Aug 4 23:49:04 UTC 2024 I: libtfbs-perl from bullseye built successfully and reproducibly on amd64. Sun Aug 4 23:49:05 UTC 2024 I: Submitting .buildinfo files to external archives: Sun Aug 4 23:49:05 UTC 2024 I: Submitting 12K b1/libtfbs-perl_0.7.1-3_amd64.buildinfo.asc Sun Aug 4 23:49:07 UTC 2024 I: Submitting 12K b2/libtfbs-perl_0.7.1-3_amd64.buildinfo.asc Sun Aug 4 23:49:08 UTC 2024 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Sun Aug 4 23:49:08 UTC 2024 I: Done submitting .buildinfo files. Sun Aug 4 23:49:08 UTC 2024 I: Removing signed libtfbs-perl_0.7.1-3_amd64.buildinfo.asc files: removed './b1/libtfbs-perl_0.7.1-3_amd64.buildinfo.asc' removed './b2/libtfbs-perl_0.7.1-3_amd64.buildinfo.asc'