Mon Jul 31 02:36:23 UTC 2023 I: starting to build htscodecs/bullseye/amd64 on jenkins on '2023-07-31 02:36' Mon Jul 31 02:36:23 UTC 2023 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/amd64_9/5427/console.log Mon Jul 31 02:36:23 UTC 2023 I: Downloading source for bullseye/htscodecs=0.5-3 --2023-07-31 02:36:23-- http://cdn-fastly.deb.debian.org/debian/pool/main/h/htscodecs/htscodecs_0.5-3.dsc Connecting to 78.137.99.97:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2013 (2.0K) [text/prs.lines.tag] Saving to: ‘htscodecs_0.5-3.dsc’ 0K . 100% 140M=0s 2023-07-31 02:36:23 (140 MB/s) - ‘htscodecs_0.5-3.dsc’ saved [2013/2013] Mon Jul 31 02:36:23 UTC 2023 I: htscodecs_0.5-3.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: htscodecs Binary: libhtscodecs2, libhtscodecs-dev Architecture: any Version: 0.5-3 Maintainer: Debian Med Packaging Team Uploaders: Michael R. Crusoe Homepage: https://github.com/jkbonfield/htscodecs/ Standards-Version: 4.5.0 Vcs-Browser: https://salsa.debian.org/med-team/htscodecs Vcs-Git: https://salsa.debian.org/med-team/htscodecs.git Build-Depends: debhelper-compat (= 12), libbz2-dev Package-List: libhtscodecs-dev deb libdevel optional arch=any libhtscodecs2 deb libs optional arch=any Checksums-Sha1: 4a9e54e9ac0fcbd563b77fb7680f673ef454a75c 2728301 htscodecs_0.5.orig.tar.gz cae7c50f115520a9efc3c0c82e6af7645af5a869 6752 htscodecs_0.5-3.debian.tar.xz Checksums-Sha256: bac6883e37b474ad8ce04d61204f513301eb884aaaf5f4e6d69c4e9fb3368328 2728301 htscodecs_0.5.orig.tar.gz a906f7484a2108f72a8130f6a5248fbbd810381cae95e9c51225b065071dbec0 6752 htscodecs_0.5-3.debian.tar.xz Files: db609a11f3c4ef4a268b73250af71686 2728301 htscodecs_0.5.orig.tar.gz ce7d0689e62213d56265355e1c9ee3ed 6752 htscodecs_0.5-3.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQIzBAEBCgAdFiEEck1gkzcRPHEFUNdHPCZ2P2xn5uIFAl5L4oQACgkQPCZ2P2xn 5uLpXw/9Hsw127KX2p3AxH6XIVZ+vx7CiQnvbyzZnXosRwbzV+mRIelIw5lvmq3N 2xup4bRFdFAVy4G7gBlE7p0VEla4KfOKteq7SN6Zk8UDGMwOF27Z7hM/WArufFqU Nz6xAj+zQYfiBnc2hokYmxUoHUlujjVsu1FHxa/PKvhKcUU7Ow5k9cYp9qq41TJF fE73U014McPFQfZrYENatp5Ne5VoQz4vcEKxdpuc9SUd0PvFtMPZbihzc8xNTEOi Dwezipca/u5khR25uybCihTndZnWKmnUPlmz95323RIYYZUeYnmx4vlWGXxFmR1R Zet5e5hkr9vUrqMyKmFbfF82/PmmIJSHUq9tUQXOOkomPHPMbyFRnOIsg1XDezuS qCUKzXh3gUNBZXBd+/UWsvzbXy7JNFxqtK/DeUnuMaH4NMXpGqJsC/7l/9z+gqXU Ll0z3QAiFcRNs8V8GJcrIXv5F61Bdx+EkAs0yRFYtXAvR/yVL5xq2PvjoVN0rNj0 NoHwejJDjkz8CEGIw0rSS6kPfN1X5Demb20ca3I8Rx1pc2X3tSMKWLojavZeOcaP zLpZFxaWjPGPKUy3YSkh2+NTg9+/LU2A/Ddj90Afwv1LMp3XhXY+Hip210BD19lW Yp5bje0YHXRryE5Bz00KDKjnUW0D7NbMkTJoQCT1lcwrUQDuarA= =eKxO -----END PGP SIGNATURE----- Mon Jul 31 02:36:23 UTC 2023 I: Checking whether the package is not for us Mon Jul 31 02:36:23 UTC 2023 I: Starting 1st build on remote node ionos1-amd64.debian.net. Mon Jul 31 02:36:23 UTC 2023 I: Preparing to do remote build '1' on ionos1-amd64.debian.net. Mon Jul 31 02:38:13 UTC 2023 I: Deleting $TMPDIR on ionos1-amd64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Sun Jul 30 14:36:26 -12 2023 I: pbuilder-time-stamp: 1690770986 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bullseye-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [htscodecs_0.5-3.dsc] I: copying [./htscodecs_0.5.orig.tar.gz] I: copying [./htscodecs_0.5-3.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/tmp/dpkg-verify-sig.EZaf8gCd/trustedkeys.kbx': General error gpgv: Signature made Tue Feb 18 01:11:32 2020 -12 gpgv: using RSA key 724D609337113C710550D7473C26763F6C67E6E2 gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./htscodecs_0.5-3.dsc dpkg-source: info: extracting htscodecs in htscodecs-0.5 dpkg-source: info: unpacking htscodecs_0.5.orig.tar.gz dpkg-source: info: unpacking htscodecs_0.5-3.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying big-endian dpkg-source: info: applying ship_varint_h dpkg-source: info: applying link_with_libm I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/3962516/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='amd64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=15 ' DISTRIBUTION='bullseye' HOME='/root' HOST_ARCH='amd64' IFS=' ' INVOCATION_ID='bfa922fd65d34e79a668ecec83f55042' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='3962516' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.CogtofR1/pbuilderrc_uzQi --distribution bullseye --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.CogtofR1/b1 --logfile b1/build.log htscodecs_0.5-3.dsc' SUDO_GID='110' SUDO_UID='105' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://78.137.99.97:3128' I: uname -a Linux ionos1-amd64 6.1.0-10-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.38-2 (2023-07-27) x86_64 GNU/Linux I: ls -l /bin total 5476 -rwxr-xr-x 1 root root 1234376 Mar 27 2022 bash -rwxr-xr-x 3 root root 38984 Jul 20 2020 bunzip2 -rwxr-xr-x 3 root root 38984 Jul 20 2020 bzcat lrwxrwxrwx 1 root root 6 Jul 20 2020 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2225 Jul 20 2020 bzdiff lrwxrwxrwx 1 root root 6 Jul 20 2020 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4877 Sep 4 2019 bzexe lrwxrwxrwx 1 root root 6 Jul 20 2020 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3775 Jul 20 2020 bzgrep -rwxr-xr-x 3 root root 38984 Jul 20 2020 bzip2 -rwxr-xr-x 1 root root 18424 Jul 20 2020 bzip2recover lrwxrwxrwx 1 root root 6 Jul 20 2020 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Jul 20 2020 bzmore -rwxr-xr-x 1 root root 43936 Sep 23 2020 cat -rwxr-xr-x 1 root root 72672 Sep 23 2020 chgrp -rwxr-xr-x 1 root root 64448 Sep 23 2020 chmod -rwxr-xr-x 1 root root 72672 Sep 23 2020 chown -rwxr-xr-x 1 root root 151168 Sep 23 2020 cp -rwxr-xr-x 1 root root 125560 Dec 10 2020 dash -rwxr-xr-x 1 root root 113664 Sep 23 2020 date -rwxr-xr-x 1 root root 80968 Sep 23 2020 dd -rwxr-xr-x 1 root root 93936 Sep 23 2020 df -rwxr-xr-x 1 root root 147176 Sep 23 2020 dir -rwxr-xr-x 1 root root 84440 Jan 20 2022 dmesg lrwxrwxrwx 1 root root 8 Nov 6 2019 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Nov 6 2019 domainname -> hostname -rwxr-xr-x 1 root root 39712 Sep 23 2020 echo -rwxr-xr-x 1 root root 28 Jan 24 2023 egrep -rwxr-xr-x 1 root root 39680 Sep 23 2020 false -rwxr-xr-x 1 root root 28 Jan 24 2023 fgrep -rwxr-xr-x 1 root root 69032 Jan 20 2022 findmnt -rwsr-xr-x 1 root root 34896 Feb 26 2021 fusermount -rwxr-xr-x 1 root root 203072 Jan 24 2023 grep -rwxr-xr-x 2 root root 2346 Apr 9 2022 gunzip -rwxr-xr-x 1 root root 6447 Apr 9 2022 gzexe -rwxr-xr-x 1 root root 98048 Apr 9 2022 gzip -rwxr-xr-x 1 root root 22600 Nov 6 2019 hostname -rwxr-xr-x 1 root root 72840 Sep 23 2020 ln -rwxr-xr-x 1 root root 56952 Feb 7 2020 login -rwxr-xr-x 1 root root 147176 Sep 23 2020 ls -rwxr-xr-x 1 root root 149736 Jan 20 2022 lsblk -rwxr-xr-x 1 root root 85184 Sep 23 2020 mkdir -rwxr-xr-x 1 root root 76896 Sep 23 2020 mknod -rwxr-xr-x 1 root root 48064 Sep 23 2020 mktemp -rwxr-xr-x 1 root root 59632 Jan 20 2022 more -rwsr-xr-x 1 root root 55528 Jan 20 2022 mount -rwxr-xr-x 1 root root 18664 Jan 20 2022 mountpoint -rwxr-xr-x 1 root root 147080 Sep 23 2020 mv lrwxrwxrwx 1 root root 8 Nov 6 2019 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Dec 16 2021 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 43872 Sep 23 2020 pwd lrwxrwxrwx 1 root root 4 Mar 27 2022 rbash -> bash -rwxr-xr-x 1 root root 52032 Sep 23 2020 readlink -rwxr-xr-x 1 root root 72704 Sep 23 2020 rm -rwxr-xr-x 1 root root 52032 Sep 23 2020 rmdir -rwxr-xr-x 1 root root 27472 Sep 27 2020 run-parts -rwxr-xr-x 1 root root 122224 Dec 22 2018 sed lrwxrwxrwx 1 root root 4 Jul 6 21:24 sh -> dash -rwxr-xr-x 1 root root 43808 Sep 23 2020 sleep -rwxr-xr-x 1 root root 84928 Sep 23 2020 stty -rwsr-xr-x 1 root root 71912 Jan 20 2022 su -rwxr-xr-x 1 root root 39744 Sep 23 2020 sync -rwxr-xr-x 1 root root 531928 Feb 16 2021 tar -rwxr-xr-x 1 root root 14456 Sep 27 2020 tempfile -rwxr-xr-x 1 root root 101408 Sep 23 2020 touch -rwxr-xr-x 1 root root 39680 Sep 23 2020 true -rwxr-xr-x 1 root root 14328 Feb 26 2021 ulockmgr_server -rwsr-xr-x 1 root root 35040 Jan 20 2022 umount -rwxr-xr-x 1 root root 39744 Sep 23 2020 uname -rwxr-xr-x 2 root root 2346 Apr 9 2022 uncompress -rwxr-xr-x 1 root root 147176 Sep 23 2020 vdir -rwxr-xr-x 1 root root 63744 Jan 20 2022 wdctl lrwxrwxrwx 1 root root 8 Nov 6 2019 ypdomainname -> hostname -rwxr-xr-x 1 root root 1984 Apr 9 2022 zcat -rwxr-xr-x 1 root root 1678 Apr 9 2022 zcmp -rwxr-xr-x 1 root root 5898 Apr 9 2022 zdiff -rwxr-xr-x 1 root root 29 Apr 9 2022 zegrep -rwxr-xr-x 1 root root 29 Apr 9 2022 zfgrep -rwxr-xr-x 1 root root 2081 Apr 9 2022 zforce -rwxr-xr-x 1 root root 8049 Apr 9 2022 zgrep -rwxr-xr-x 1 root root 2206 Apr 9 2022 zless -rwxr-xr-x 1 root root 1842 Apr 9 2022 zmore -rwxr-xr-x 1 root root 4577 Apr 9 2022 znew I: user script /srv/workspace/pbuilder/3962516/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 12), libbz2-dev dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19707 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 12); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on libbz2-dev; however: Package libbz2-dev is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libbz2-dev{a} libdebhelper-perl{a} libelf1{a} libfile-stripnondeterminism-perl{a} libicu67{a} libmagic-mgc{a} libmagic1{a} libpipeline1{a} libsigsegv2{a} libsub-override-perl{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} po-debconf{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: bzip2-doc curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 32 newly installed, 0 to remove and 0 not upgraded. Need to get 18.3 MB of archives. After unpacking 67.8 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian bullseye/main amd64 bsdextrautils amd64 2.36.1-8+deb11u1 [145 kB] Get: 2 http://deb.debian.org/debian bullseye/main amd64 libuchardet0 amd64 0.0.7-1 [67.8 kB] Get: 3 http://deb.debian.org/debian bullseye/main amd64 groff-base amd64 1.22.4-6 [936 kB] Get: 4 http://deb.debian.org/debian bullseye/main amd64 libpipeline1 amd64 1.5.3-1 [34.3 kB] Get: 5 http://deb.debian.org/debian bullseye/main amd64 man-db amd64 2.9.4-2 [1354 kB] Get: 6 http://deb.debian.org/debian bullseye/main amd64 sensible-utils all 0.0.14 [14.8 kB] Get: 7 http://deb.debian.org/debian bullseye/main amd64 libmagic-mgc amd64 1:5.39-3 [273 kB] Get: 8 http://deb.debian.org/debian bullseye/main amd64 libmagic1 amd64 1:5.39-3 [126 kB] Get: 9 http://deb.debian.org/debian bullseye/main amd64 file amd64 1:5.39-3 [69.1 kB] Get: 10 http://deb.debian.org/debian bullseye/main amd64 gettext-base amd64 0.21-4 [175 kB] Get: 11 http://deb.debian.org/debian bullseye/main amd64 libsigsegv2 amd64 2.13-1 [34.8 kB] Get: 12 http://deb.debian.org/debian bullseye/main amd64 m4 amd64 1.4.18-5 [204 kB] Get: 13 http://deb.debian.org/debian bullseye/main amd64 autoconf all 2.69-14 [313 kB] Get: 14 http://deb.debian.org/debian bullseye/main amd64 autotools-dev all 20180224.1+nmu1 [77.1 kB] Get: 15 http://deb.debian.org/debian bullseye/main amd64 automake all 1:1.16.3-2 [814 kB] Get: 16 http://deb.debian.org/debian bullseye/main amd64 autopoint all 0.21-4 [510 kB] Get: 17 http://deb.debian.org/debian bullseye/main amd64 libdebhelper-perl all 13.3.4 [189 kB] Get: 18 http://deb.debian.org/debian bullseye/main amd64 libtool all 2.4.6-15 [513 kB] Get: 19 http://deb.debian.org/debian bullseye/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 20 http://deb.debian.org/debian bullseye/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 21 http://deb.debian.org/debian bullseye/main amd64 libsub-override-perl all 0.09-2 [10.2 kB] Get: 22 http://deb.debian.org/debian bullseye/main amd64 libfile-stripnondeterminism-perl all 1.12.0-1 [26.3 kB] Get: 23 http://deb.debian.org/debian bullseye/main amd64 dh-strip-nondeterminism all 1.12.0-1 [15.4 kB] Get: 24 http://deb.debian.org/debian bullseye/main amd64 libelf1 amd64 0.183-1 [165 kB] Get: 25 http://deb.debian.org/debian bullseye/main amd64 dwz amd64 0.13+20210201-1 [175 kB] Get: 26 http://deb.debian.org/debian bullseye/main amd64 libicu67 amd64 67.1-7 [8622 kB] Get: 27 http://deb.debian.org/debian bullseye/main amd64 libxml2 amd64 2.9.10+dfsg-6.7+deb11u4 [693 kB] Get: 28 http://deb.debian.org/debian bullseye/main amd64 gettext amd64 0.21-4 [1311 kB] Get: 29 http://deb.debian.org/debian bullseye/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get: 30 http://deb.debian.org/debian bullseye/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 31 http://deb.debian.org/debian bullseye/main amd64 debhelper all 13.3.4 [1049 kB] Get: 32 http://deb.debian.org/debian bullseye/main amd64 libbz2-dev amd64 1.0.8-4 [30.1 kB] Fetched 18.3 MB in 0s (53.2 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package bsdextrautils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19707 files and directories currently installed.) Preparing to unpack .../00-bsdextrautils_2.36.1-8+deb11u1_amd64.deb ... Unpacking bsdextrautils (2.36.1-8+deb11u1) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../01-libuchardet0_0.0.7-1_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../02-groff-base_1.22.4-6_amd64.deb ... Unpacking groff-base (1.22.4-6) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../03-libpipeline1_1.5.3-1_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.3-1) ... Selecting previously unselected package man-db. Preparing to unpack .../04-man-db_2.9.4-2_amd64.deb ... Unpacking man-db (2.9.4-2) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../05-sensible-utils_0.0.14_all.deb ... Unpacking sensible-utils (0.0.14) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../06-libmagic-mgc_1%3a5.39-3_amd64.deb ... Unpacking libmagic-mgc (1:5.39-3) ... Selecting previously unselected package libmagic1:amd64. Preparing to unpack .../07-libmagic1_1%3a5.39-3_amd64.deb ... Unpacking libmagic1:amd64 (1:5.39-3) ... Selecting previously unselected package file. Preparing to unpack .../08-file_1%3a5.39-3_amd64.deb ... Unpacking file (1:5.39-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../09-gettext-base_0.21-4_amd64.deb ... Unpacking gettext-base (0.21-4) ... Selecting previously unselected package libsigsegv2:amd64. Preparing to unpack .../10-libsigsegv2_2.13-1_amd64.deb ... Unpacking libsigsegv2:amd64 (2.13-1) ... Selecting previously unselected package m4. Preparing to unpack .../11-m4_1.4.18-5_amd64.deb ... Unpacking m4 (1.4.18-5) ... Selecting previously unselected package autoconf. Preparing to unpack .../12-autoconf_2.69-14_all.deb ... Unpacking autoconf (2.69-14) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../13-autotools-dev_20180224.1+nmu1_all.deb ... Unpacking autotools-dev (20180224.1+nmu1) ... Selecting previously unselected package automake. Preparing to unpack .../14-automake_1%3a1.16.3-2_all.deb ... Unpacking automake (1:1.16.3-2) ... Selecting previously unselected package autopoint. Preparing to unpack .../15-autopoint_0.21-4_all.deb ... Unpacking autopoint (0.21-4) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../16-libdebhelper-perl_13.3.4_all.deb ... Unpacking libdebhelper-perl (13.3.4) ... Selecting previously unselected package libtool. Preparing to unpack .../17-libtool_2.4.6-15_all.deb ... Unpacking libtool (2.4.6-15) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../18-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../19-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libsub-override-perl. Preparing to unpack .../20-libsub-override-perl_0.09-2_all.deb ... Unpacking libsub-override-perl (0.09-2) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../21-libfile-stripnondeterminism-perl_1.12.0-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.12.0-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../22-dh-strip-nondeterminism_1.12.0-1_all.deb ... Unpacking dh-strip-nondeterminism (1.12.0-1) ... Selecting previously unselected package libelf1:amd64. Preparing to unpack .../23-libelf1_0.183-1_amd64.deb ... Unpacking libelf1:amd64 (0.183-1) ... Selecting previously unselected package dwz. Preparing to unpack .../24-dwz_0.13+20210201-1_amd64.deb ... Unpacking dwz (0.13+20210201-1) ... Selecting previously unselected package libicu67:amd64. Preparing to unpack .../25-libicu67_67.1-7_amd64.deb ... Unpacking libicu67:amd64 (67.1-7) ... Selecting previously unselected package libxml2:amd64. Preparing to unpack .../26-libxml2_2.9.10+dfsg-6.7+deb11u4_amd64.deb ... Unpacking libxml2:amd64 (2.9.10+dfsg-6.7+deb11u4) ... Selecting previously unselected package gettext. Preparing to unpack .../27-gettext_0.21-4_amd64.deb ... Unpacking gettext (0.21-4) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../28-intltool-debian_0.35.0+20060710.5_all.deb ... Unpacking intltool-debian (0.35.0+20060710.5) ... Selecting previously unselected package po-debconf. Preparing to unpack .../29-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../30-debhelper_13.3.4_all.deb ... Unpacking debhelper (13.3.4) ... Selecting previously unselected package libbz2-dev:amd64. Preparing to unpack .../31-libbz2-dev_1.0.8-4_amd64.deb ... Unpacking libbz2-dev:amd64 (1.0.8-4) ... Setting up libpipeline1:amd64 (1.5.3-1) ... Setting up bsdextrautils (2.36.1-8+deb11u1) ... update-alternatives: using /usr/bin/write.ul to provide /usr/bin/write (write) in auto mode Setting up libicu67:amd64 (67.1-7) ... Setting up libmagic-mgc (1:5.39-3) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libdebhelper-perl (13.3.4) ... Setting up libmagic1:amd64 (1:5.39-3) ... Setting up gettext-base (0.21-4) ... Setting up file (1:5.39-3) ... Setting up autotools-dev (20180224.1+nmu1) ... Setting up libsigsegv2:amd64 (2.13-1) ... Setting up autopoint (0.21-4) ... Setting up sensible-utils (0.0.14) ... Setting up libuchardet0:amd64 (0.0.7-1) ... Setting up libsub-override-perl (0.09-2) ... Setting up libelf1:amd64 (0.183-1) ... Setting up libxml2:amd64 (2.9.10+dfsg-6.7+deb11u4) ... Setting up libbz2-dev:amd64 (1.0.8-4) ... Setting up libfile-stripnondeterminism-perl (1.12.0-1) ... Setting up gettext (0.21-4) ... Setting up libtool (2.4.6-15) ... Setting up m4 (1.4.18-5) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up autoconf (2.69-14) ... Setting up dh-strip-nondeterminism (1.12.0-1) ... Setting up dwz (0.13+20210201-1) ... Setting up groff-base (1.22.4-6) ... Setting up automake (1:1.16.3-2) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.9.4-2) ... Not building database; man-db/auto-update is not 'true'. Setting up dh-autoreconf (20) ... Setting up debhelper (13.3.4) ... Processing triggers for libc-bin (2.31-13+deb11u6) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/htscodecs-0.5/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../htscodecs_0.5-3_source.changes dpkg-buildpackage: info: source package htscodecs dpkg-buildpackage: info: source version 0.5-3 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Michael R. Crusoe dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean dh_clean debian/rules binary dh binary dh_update_autotools_config dh_autoreconf libtoolize: putting auxiliary files in '.'. libtoolize: copying file './ltmain.sh' libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'. libtoolize: copying file 'm4/libtool.m4' libtoolize: copying file 'm4/ltoptions.m4' libtoolize: copying file 'm4/ltsugar.m4' libtoolize: copying file 'm4/ltversion.m4' libtoolize: copying file 'm4/lt~obsolete.m4' configure.ac:70: installing './compile' configure.ac:72: installing './config.guess' configure.ac:72: installing './config.sub' configure.ac:10: installing './install-sh' configure.ac:10: installing './missing' htscodecs/Makefile.am: installing './depcomp' parallel-tests: installing './test-driver' dh_auto_configure ./configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-option-checking --disable-silent-rules --libdir=\${prefix}/lib/x86_64-linux-gnu --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking whether to enable maintainer-specific portions of Makefiles... no checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking whether gcc understands -c and -o together... yes checking whether make supports the include directive... yes (GNU style) checking dependency style of gcc... none checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking how to print strings... printf checking for a sed that does not truncate output... /bin/sed checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for fgrep... /bin/grep -F checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ar... ar checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for a working dd... /bin/dd checking how to truncate binary pipes... /bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... no checking how to run the C preprocessor... gcc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... yes checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking for grep that handles long lines and -e... (cached) /bin/grep checking for C compiler warning flags... -Wall checking for inflateEnd in -lz... no configure: WARNING: "No functioning zlib found" checking for BZ2_bzBuffToBuffCompress in -lbz2... yes checking for ANSI C header files... (cached) yes checking for sys/wait.h that is POSIX.1 compatible... yes checking fcntl.h usability... yes checking fcntl.h presence... yes checking for fcntl.h... yes checking limits.h usability... yes checking limits.h presence... yes checking for limits.h... yes checking for unistd.h... (cached) yes checking malloc.h usability... yes checking malloc.h presence... yes checking for malloc.h... yes checking zlib.h usability... no checking zlib.h presence... no checking for zlib.h... no checking for library containing pthread_join... -lpthread checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating htscodecs/Makefile config.status: creating tests/Makefile config.status: creating config.h config.status: executing depfiles commands config.status: executing libtool commands dh_auto_build make -j15 make[1]: Entering directory '/build/htscodecs-0.5' make all-recursive make[2]: Entering directory '/build/htscodecs-0.5' Making all in htscodecs make[3]: Entering directory '/build/htscodecs-0.5/htscodecs' /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/build/htscodecs-0.5=. -fstack-protector-strong -Wformat -Werror=format-security -c -o pack.lo pack.c /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/build/htscodecs-0.5=. -fstack-protector-strong -Wformat -Werror=format-security -c -o rle.lo rle.c /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/build/htscodecs-0.5=. -fstack-protector-strong -Wformat -Werror=format-security -c -o fqzcomp_qual.lo fqzcomp_qual.c /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/build/htscodecs-0.5=. -fstack-protector-strong -Wformat -Werror=format-security -c -o rANS_static.lo rANS_static.c /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/build/htscodecs-0.5=. -fstack-protector-strong -Wformat -Werror=format-security -c -o rANS_static4x16pr.lo rANS_static4x16pr.c /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/build/htscodecs-0.5=. -fstack-protector-strong -Wformat -Werror=format-security -c -o tokenise_name3.lo tokenise_name3.c /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/build/htscodecs-0.5=. -fstack-protector-strong -Wformat -Werror=format-security -c -o arith_dynamic.lo arith_dynamic.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/build/htscodecs-0.5=. -fstack-protector-strong -Wformat -Werror=format-security -c rle.c -fPIC -DPIC -o .libs/rle.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/build/htscodecs-0.5=. -fstack-protector-strong -Wformat -Werror=format-security -c fqzcomp_qual.c -fPIC -DPIC -o .libs/fqzcomp_qual.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/build/htscodecs-0.5=. -fstack-protector-strong -Wformat -Werror=format-security -c pack.c -fPIC -DPIC -o .libs/pack.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/build/htscodecs-0.5=. -fstack-protector-strong -Wformat -Werror=format-security -c tokenise_name3.c -fPIC -DPIC -o .libs/tokenise_name3.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/build/htscodecs-0.5=. -fstack-protector-strong -Wformat -Werror=format-security -c rANS_static.c -fPIC -DPIC -o .libs/rANS_static.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/build/htscodecs-0.5=. -fstack-protector-strong -Wformat -Werror=format-security -c arith_dynamic.c -fPIC -DPIC -o .libs/arith_dynamic.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/build/htscodecs-0.5=. -fstack-protector-strong -Wformat -Werror=format-security -c rANS_static4x16pr.c -fPIC -DPIC -o .libs/rANS_static4x16pr.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/build/htscodecs-0.5=. -fstack-protector-strong -Wformat -Werror=format-security -c rle.c -o rle.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/build/htscodecs-0.5=. -fstack-protector-strong -Wformat -Werror=format-security -c pack.c -o pack.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/build/htscodecs-0.5=. -fstack-protector-strong -Wformat -Werror=format-security -c rANS_static.c -o rANS_static.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/build/htscodecs-0.5=. -fstack-protector-strong -Wformat -Werror=format-security -c tokenise_name3.c -o tokenise_name3.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/build/htscodecs-0.5=. -fstack-protector-strong -Wformat -Werror=format-security -c arith_dynamic.c -o arith_dynamic.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/build/htscodecs-0.5=. -fstack-protector-strong -Wformat -Werror=format-security -c fqzcomp_qual.c -o fqzcomp_qual.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/build/htscodecs-0.5=. -fstack-protector-strong -Wformat -Werror=format-security -c rANS_static4x16pr.c -o rANS_static4x16pr.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=link gcc -Wall -g -O2 -fdebug-prefix-map=/build/htscodecs-0.5=. -fstack-protector-strong -Wformat -Werror=format-security -version-info 2:0:0 -Wl,-z,relro -Wl,-z,now -o libhtscodecs.la -rpath /usr/lib/x86_64-linux-gnu pack.lo rle.lo fqzcomp_qual.lo rANS_static.lo rANS_static4x16pr.lo tokenise_name3.lo arith_dynamic.lo -lm -lpthread -lbz2 libtool: link: gcc -shared -fPIC -DPIC .libs/pack.o .libs/rle.o .libs/fqzcomp_qual.o .libs/rANS_static.o .libs/rANS_static4x16pr.o .libs/tokenise_name3.o .libs/arith_dynamic.o -lm -lpthread -lbz2 -g -O2 -fstack-protector-strong -Wl,-z -Wl,relro -Wl,-z -Wl,now -Wl,-soname -Wl,libhtscodecs.so.2 -o .libs/libhtscodecs.so.2.0.0 libtool: link: (cd ".libs" && rm -f "libhtscodecs.so.2" && ln -s "libhtscodecs.so.2.0.0" "libhtscodecs.so.2") libtool: link: (cd ".libs" && rm -f "libhtscodecs.so" && ln -s "libhtscodecs.so.2.0.0" "libhtscodecs.so") libtool: link: ar cr .libs/libhtscodecs.a pack.o rle.o fqzcomp_qual.o rANS_static.o rANS_static4x16pr.o tokenise_name3.o arith_dynamic.o libtool: link: ranlib .libs/libhtscodecs.a libtool: link: ( cd ".libs" && rm -f "libhtscodecs.la" && ln -s "../libhtscodecs.la" "libhtscodecs.la" ) make[3]: Leaving directory '/build/htscodecs-0.5/htscodecs' Making all in tests make[3]: Entering directory '/build/htscodecs-0.5/tests' gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/build/htscodecs-0.5=. -fstack-protector-strong -Wformat -Werror=format-security -c -o rANS_static4x16pr_test.o rANS_static4x16pr_test.c gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/build/htscodecs-0.5=. -fstack-protector-strong -Wformat -Werror=format-security -c -o tokenise_name3_test.o tokenise_name3_test.c gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/build/htscodecs-0.5=. -fstack-protector-strong -Wformat -Werror=format-security -c -o arith_dynamic_test.o arith_dynamic_test.c gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/build/htscodecs-0.5=. -fstack-protector-strong -Wformat -Werror=format-security -c -o rANS_static_test.o rANS_static_test.c gcc -DHAVE_CONFIG_H -I. -I.. -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -Wall -g -O2 -fdebug-prefix-map=/build/htscodecs-0.5=. -fstack-protector-strong -Wformat -Werror=format-security -c -o fqzcomp_qual_test.o fqzcomp_qual_test.c /bin/bash ../libtool --tag=CC --mode=link gcc -Wall -g -O2 -fdebug-prefix-map=/build/htscodecs-0.5=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o tokenise_name3 tokenise_name3_test.o ../htscodecs/libhtscodecs.la -lpthread -lbz2 /bin/bash ../libtool --tag=CC --mode=link gcc -Wall -g -O2 -fdebug-prefix-map=/build/htscodecs-0.5=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o rans4x16pr rANS_static4x16pr_test.o ../htscodecs/libhtscodecs.la -lpthread -lbz2 /bin/bash ../libtool --tag=CC --mode=link gcc -Wall -g -O2 -fdebug-prefix-map=/build/htscodecs-0.5=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o rans4x8 rANS_static_test.o ../htscodecs/libhtscodecs.la -lpthread -lbz2 /bin/bash ../libtool --tag=CC --mode=link gcc -Wall -g -O2 -fdebug-prefix-map=/build/htscodecs-0.5=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o arith_dynamic arith_dynamic_test.o ../htscodecs/libhtscodecs.la -lpthread -lbz2 libtool: link: gcc -Wall -g -O2 -fdebug-prefix-map=/build/htscodecs-0.5=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/tokenise_name3 tokenise_name3_test.o ../htscodecs/.libs/libhtscodecs.so -lpthread -lbz2 libtool: link: gcc -Wall -g -O2 -fdebug-prefix-map=/build/htscodecs-0.5=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/rans4x16pr rANS_static4x16pr_test.o ../htscodecs/.libs/libhtscodecs.so -lpthread -lbz2 libtool: link: gcc -Wall -g -O2 -fdebug-prefix-map=/build/htscodecs-0.5=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/arith_dynamic arith_dynamic_test.o ../htscodecs/.libs/libhtscodecs.so -lpthread -lbz2 libtool: link: gcc -Wall -g -O2 -fdebug-prefix-map=/build/htscodecs-0.5=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/rans4x8 rANS_static_test.o ../htscodecs/.libs/libhtscodecs.so -lpthread -lbz2 /bin/bash ../libtool --tag=CC --mode=link gcc -Wall -g -O2 -fdebug-prefix-map=/build/htscodecs-0.5=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -Wl,-z,now -o fqzcomp_qual fqzcomp_qual_test.o ../htscodecs/libhtscodecs.la -lpthread -lbz2 libtool: link: gcc -Wall -g -O2 -fdebug-prefix-map=/build/htscodecs-0.5=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -Wl,-z -Wl,now -o .libs/fqzcomp_qual fqzcomp_qual_test.o ../htscodecs/.libs/libhtscodecs.so -lpthread -lbz2 make[3]: Leaving directory '/build/htscodecs-0.5/tests' make[3]: Entering directory '/build/htscodecs-0.5' make[3]: Leaving directory '/build/htscodecs-0.5' make[2]: Leaving directory '/build/htscodecs-0.5' make[1]: Leaving directory '/build/htscodecs-0.5' debian/rules override_dh_auto_test make[1]: Entering directory '/build/htscodecs-0.5' make check make[2]: Entering directory '/build/htscodecs-0.5' Making check in htscodecs make[3]: Entering directory '/build/htscodecs-0.5/htscodecs' make[3]: Nothing to be done for 'check'. make[3]: Leaving directory '/build/htscodecs-0.5/htscodecs' Making check in tests make[3]: Entering directory '/build/htscodecs-0.5/tests' make check-TESTS make[4]: Entering directory '/build/htscodecs-0.5/tests' make[5]: Entering directory '/build/htscodecs-0.5/tests' PASS: rans4x8.test PASS: rans4x16.test PASS: arith.test PASS: tok3.test PASS: fqzcomp.test ============================================================================ Testsuite summary for htscodecs 0.5 ============================================================================ # TOTAL: 5 # PASS: 5 # SKIP: 0 # XFAIL: 0 # FAIL: 0 # XPASS: 0 # ERROR: 0 ============================================================================ make[5]: Leaving directory '/build/htscodecs-0.5/tests' make[4]: Leaving directory '/build/htscodecs-0.5/tests' make[3]: Leaving directory '/build/htscodecs-0.5/tests' make[3]: Entering directory '/build/htscodecs-0.5' make[3]: Leaving directory '/build/htscodecs-0.5' make[2]: Leaving directory '/build/htscodecs-0.5' make[1]: Leaving directory '/build/htscodecs-0.5' create-stamp debian/debhelper-build-stamp dh_prep dh_auto_install make -j1 install DESTDIR=/build/htscodecs-0.5/debian/tmp AM_UPDATE_INFO_DIR=no make[1]: Entering directory '/build/htscodecs-0.5' Making install in htscodecs make[2]: Entering directory '/build/htscodecs-0.5/htscodecs' make[3]: Entering directory '/build/htscodecs-0.5/htscodecs' /bin/mkdir -p '/build/htscodecs-0.5/debian/tmp/usr/lib/x86_64-linux-gnu' /bin/bash ../libtool --mode=install /usr/bin/install -c libhtscodecs.la '/build/htscodecs-0.5/debian/tmp/usr/lib/x86_64-linux-gnu' libtool: install: /usr/bin/install -c .libs/libhtscodecs.so.2.0.0 /build/htscodecs-0.5/debian/tmp/usr/lib/x86_64-linux-gnu/libhtscodecs.so.2.0.0 libtool: install: (cd /build/htscodecs-0.5/debian/tmp/usr/lib/x86_64-linux-gnu && { ln -s -f libhtscodecs.so.2.0.0 libhtscodecs.so.2 || { rm -f libhtscodecs.so.2 && ln -s libhtscodecs.so.2.0.0 libhtscodecs.so.2; }; }) libtool: install: (cd /build/htscodecs-0.5/debian/tmp/usr/lib/x86_64-linux-gnu && { ln -s -f libhtscodecs.so.2.0.0 libhtscodecs.so || { rm -f libhtscodecs.so && ln -s libhtscodecs.so.2.0.0 libhtscodecs.so; }; }) libtool: install: /usr/bin/install -c .libs/libhtscodecs.lai /build/htscodecs-0.5/debian/tmp/usr/lib/x86_64-linux-gnu/libhtscodecs.la libtool: install: /usr/bin/install -c .libs/libhtscodecs.a /build/htscodecs-0.5/debian/tmp/usr/lib/x86_64-linux-gnu/libhtscodecs.a libtool: install: chmod 644 /build/htscodecs-0.5/debian/tmp/usr/lib/x86_64-linux-gnu/libhtscodecs.a libtool: install: ranlib /build/htscodecs-0.5/debian/tmp/usr/lib/x86_64-linux-gnu/libhtscodecs.a libtool: warning: remember to run 'libtool --finish /usr/lib/x86_64-linux-gnu' make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/build/htscodecs-0.5/htscodecs' make[2]: Leaving directory '/build/htscodecs-0.5/htscodecs' Making install in tests make[2]: Entering directory '/build/htscodecs-0.5/tests' make[3]: Entering directory '/build/htscodecs-0.5/tests' make[3]: Nothing to be done for 'install-exec-am'. make[3]: Nothing to be done for 'install-data-am'. make[3]: Leaving directory '/build/htscodecs-0.5/tests' make[2]: Leaving directory '/build/htscodecs-0.5/tests' make[2]: Entering directory '/build/htscodecs-0.5' make[3]: Entering directory '/build/htscodecs-0.5' make[3]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/build/htscodecs-0.5/debian/tmp/usr/include' /bin/mkdir -p '/build/htscodecs-0.5/debian/tmp/usr/include/htscodecs' /usr/bin/install -c -m 644 htscodecs/arith_dynamic.h htscodecs/fqzcomp_qual.h htscodecs/rANS_static.h htscodecs/rANS_static4x16.h htscodecs/tokenise_name3.h htscodecs/pack.h htscodecs/varint.h htscodecs/rle.h '/build/htscodecs-0.5/debian/tmp/usr/include/htscodecs' make[3]: Leaving directory '/build/htscodecs-0.5' make[2]: Leaving directory '/build/htscodecs-0.5' make[1]: Leaving directory '/build/htscodecs-0.5' dh_install dh_installdocs dh_installchangelogs debian/rules override_dh_installexamples make[1]: Entering directory '/build/htscodecs-0.5' rm -Rf tests/.libs tests/tok* tests/test.out tests/*.o tests/*log \ tests/Makefile tests/Makefile.in tests/arith_dynamic tests/fqzcomp_qual \ tests/rans4x16pr tests/rans4x8 dh_installexamples make[1]: Leaving directory '/build/htscodecs-0.5' dh_perl dh_link dh_strip_nondeterminism dh_compress dh_fixperms dh_missing dh_missing: warning: usr/lib/x86_64-linux-gnu/libhtscodecs.a exists in debian/tmp but is not installed to anywhere dh_missing: warning: usr/lib/x86_64-linux-gnu/libhtscodecs.la exists in debian/tmp but is not installed to anywhere The following debhelper tools have reported what they installed (with files per package) * dh_install: libhtscodecs-dev (2), libhtscodecs2 (2) * dh_installdocs: libhtscodecs-dev (0), libhtscodecs2 (0) * dh_installexamples: libhtscodecs-dev (1), libhtscodecs2 (0) If the missing files are installed by another tool, please file a bug against it. When filing the report, if the tool is not part of debhelper itself, please reference the "Logging helpers and dh_missing" section from the "PROGRAMMING" guide for debhelper (10.6.3+). (in the debhelper package: /usr/share/doc/debhelper/PROGRAMMING.gz) Be sure to test with dpkg-buildpackage -A/-B as the results may vary when only a subset is built If the omission is intentional or no other helper can take care of this consider adding the paths to debian/not-installed. Remember to be careful with paths containing "x86_64-linux-gnu", where you might need to use a wildcard or (assuming compat 13+) e.g. ${DEB_HOST_MULTIARCH} in debian/not-installed to ensure it works on all architectures (see #961104). dh_dwz dh_strip dh_makeshlibs dh_shlibdeps dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'libhtscodecs-dev' in '../libhtscodecs-dev_0.5-3_amd64.deb'. dpkg-deb: building package 'libhtscodecs2' in '../libhtscodecs2_0.5-3_amd64.deb'. dpkg-deb: building package 'libhtscodecs2-dbgsym' in '../libhtscodecs2-dbgsym_0.5-3_amd64.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../htscodecs_0.5-3_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/3962516 and its subdirectories I: Current time: Sun Jul 30 14:38:13 -12 2023 I: pbuilder-time-stamp: 1690771093 Mon Jul 31 02:38:14 UTC 2023 I: 1st build successful. Starting 2nd build on remote node ionos5-amd64.debian.net. Mon Jul 31 02:38:14 UTC 2023 I: Preparing to do remote build '2' on ionos5-amd64.debian.net. Mon Jul 31 02:46:42 UTC 2023 I: Deleting $TMPDIR on ionos5-amd64.debian.net. Mon Jul 31 02:46:42 UTC 2023 I: htscodecs_0.5-3_amd64.changes: Format: 1.8 Date: Tue, 18 Feb 2020 14:11:10 +0100 Source: htscodecs Binary: libhtscodecs-dev libhtscodecs2 libhtscodecs2-dbgsym Architecture: amd64 Version: 0.5-3 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Michael R. Crusoe Description: libhtscodecs-dev - Development headers for custom compression for CRAM and others libhtscodecs2 - Custom compression for CRAM and others Changes: htscodecs (0.5-3) unstable; urgency=medium . * The packages are Multi-Arch: same. * Add a patch from upstream to fix building on big endian systems * Rules-Requires-Root: no Checksums-Sha1: 7bfaf5f03127c22443278accf1947fc225eb127b 5556 htscodecs_0.5-3_amd64.buildinfo 260ad4b7b2de792e6936c2e1dd7baeae586a2839 2517612 libhtscodecs-dev_0.5-3_amd64.deb 7025030f10f70f63e90b2cc55f1c96607d646bea 157788 libhtscodecs2-dbgsym_0.5-3_amd64.deb 23cefd2b796443052f553c71413e59ea5f914469 48300 libhtscodecs2_0.5-3_amd64.deb Checksums-Sha256: 76bab935e2296eca3d9f41a008ecebb15a43dff2b792ce28750e9f65f8b17e10 5556 htscodecs_0.5-3_amd64.buildinfo d77f49e6bfb3d31d61da5579a83833c55a9813926f82efb2de1e911e6c657a92 2517612 libhtscodecs-dev_0.5-3_amd64.deb b3f51654d58a2b5f4b12b5e0049e441ed57af741e32e8a1730a2c5620c9ecfb5 157788 libhtscodecs2-dbgsym_0.5-3_amd64.deb e3ac2ea25852e4bfc0943eef7b1eef205244d2da085482da9b3dbc9f5dcf2263 48300 libhtscodecs2_0.5-3_amd64.deb Files: 115329f2086ced7aae54a89dd70b86a3 5556 science optional htscodecs_0.5-3_amd64.buildinfo 71d72c2b687cac08ce0c5f9300f95bb4 2517612 libdevel optional libhtscodecs-dev_0.5-3_amd64.deb 26f04a2942521cee39f9adf58920194c 157788 debug optional libhtscodecs2-dbgsym_0.5-3_amd64.deb 22c7ad44852f764a16da434f2416c40c 48300 libs optional libhtscodecs2_0.5-3_amd64.deb Mon Jul 31 02:46:43 UTC 2023 I: diffoscope 243 will be used to compare the two builds: # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.CogtofR1/htscodecs_0.5-3.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.CogtofR1/htscodecs_0.5-3.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.CogtofR1/htscodecs_0.5-3.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.CogtofR1/b1/htscodecs_0.5-3_amd64.changes /srv/reproducible-results/rbuild-debian/r-b-build.CogtofR1/b2/htscodecs_0.5-3_amd64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.248s) 0.248s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.039s) 0.038s 12 calls diffoscope.comparators.binary.FilesystemFile 0.000s 10 calls abc.DotChangesFile ## specialize (total time: 0.000s) 0.000s 1 call specialize Mon Jul 31 02:46:44 UTC 2023 I: diffoscope 243 found no differences in the changes files, and a .buildinfo file also exists. Mon Jul 31 02:46:44 UTC 2023 I: htscodecs from bullseye built successfully and reproducibly on amd64. Mon Jul 31 02:46:45 UTC 2023 I: Submitting .buildinfo files to external archives: Mon Jul 31 02:46:45 UTC 2023 I: Submitting 8.0K b1/htscodecs_0.5-3_amd64.buildinfo.asc Mon Jul 31 02:46:45 UTC 2023 I: Submitting 8.0K b2/htscodecs_0.5-3_amd64.buildinfo.asc Mon Jul 31 02:46:46 UTC 2023 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Mon Jul 31 02:46:46 UTC 2023 I: Done submitting .buildinfo files. Mon Jul 31 02:46:46 UTC 2023 I: Removing signed htscodecs_0.5-3_amd64.buildinfo.asc files: removed './b1/htscodecs_0.5-3_amd64.buildinfo.asc' removed './b2/htscodecs_0.5-3_amd64.buildinfo.asc'