Sun Nov 7 14:43:37 UTC 2021 I: starting to build ctdconverter/bullseye/amd64 on jenkins on '2021-11-07 14:43' Sun Nov 7 14:43:37 UTC 2021 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/amd64_1/6274/console.log Sun Nov 7 14:43:37 UTC 2021 I: Downloading source for bullseye/ctdconverter=2.1-3 --2021-11-07 14:43:37-- http://cdn-fastly.deb.debian.org/debian/pool/main/c/ctdconverter/ctdconverter_2.1-3.dsc Connecting to 78.137.99.97:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2138 (2.1K) Saving to: ‘ctdconverter_2.1-3.dsc’ 0K .. 100% 12.3M=0s 2021-11-07 14:43:37 (12.3 MB/s) - ‘ctdconverter_2.1-3.dsc’ saved [2138/2138] Sun Nov 7 14:43:37 UTC 2021 I: ctdconverter_2.1-3.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: ctdconverter Binary: ctdconverter Architecture: all Version: 2.1-3 Maintainer: Debian Med Packaging Team Uploaders: Michael R. Crusoe Homepage: https://github.com/WorkflowConversion/CTDConverter Standards-Version: 4.5.0 Vcs-Browser: https://salsa.debian.org/med-team/ctdconverter Vcs-Git: https://salsa.debian.org/med-team/ctdconverter.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13), dh-python, python3, python3-setuptools, python3-pkg-resources, python3-lxml, python3-ruamel.yaml, python3-ctdopts, help2man, 2to3 Package-List: ctdconverter deb science optional arch=all Checksums-Sha1: 145ec9dd465829165122b821011f3647cc3d7b98 38112 ctdconverter_2.1.orig.tar.gz d5859207f72e9eca9837ed32fba0d8cccabd0f3b 7216 ctdconverter_2.1-3.debian.tar.xz Checksums-Sha256: 3449a86f292bf9760103b6b33dfe1b35c36469f84dfb1fb204fac355c45a2a57 38112 ctdconverter_2.1.orig.tar.gz 0f3792b044b8fba1c468cd837bb3b7f8728c8212b9cc617e37d54709d7c42b3b 7216 ctdconverter_2.1-3.debian.tar.xz Files: ca7d31fba1e4ac94ca8231752476884b 38112 ctdconverter_2.1.orig.tar.gz 43bdb2ba49649ff929fe9c9c9a5a7694 7216 ctdconverter_2.1-3.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAl91r2MRHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtEgCw/8C3rSGtI19sOI7GUlrzmBuwGxpI1AUjlS c31l8VSiwQ03sL4NLC7zjryqmuMOYtQaFyCPLfd2Ec19Km4n9CQgwUSmErBuz8sR cE91oAsKM+HH9B+MNWX5LIf7J5nnxKGQot2HFUN/e2mPOzCv4/Xb3V2BQVwpgH0k U9pOE7tC+UZQcKB8bcp/ZKfUTInSsccutOOP3VEXKE3RIpXqpRVz10KD78tI8f8T kfmruHkmnOxFxdKb9AdmyQ3KDyNRwqIQDbN145Ye3MewUIjXBZIxCg/eMZiqzdz2 +uk6xp/RuACiiJP65i8De5e4EPBaD15PKjFxgiOhACSZ1kvMNQc6Zb1EIgXuW624 wKG7emMbX1P4lub/cdcCpP3aaCAYro6J5C5v0utSxlPFd4ESik1u8qYX/NDy4OHQ T2b3q/sTGyPSzk3q6NsQovuOc6jnlv1kzRm8naCAl5ey8vJN5pne4CeDLv2qjbuA NvnIuNLew6QN0T1Low79/EC7I3T9nb7de6h0JZAP2t2JFE/Qx5U4WM3W3CkDwaEo /ynkdh5J1L7qxQAanXl8nK27392t/1yEvTiAp5y9ad5zTAwhhNR/7WkAxk7/f6Qd JrBydp6XRjlpxkuM5aTdLTJm39NgkJE4B91lIlOX7PlGt8dbwbknJM2TWZxOQrSU PawlpU9Py/c= =+I1x -----END PGP SIGNATURE----- Sun Nov 7 14:43:37 UTC 2021 I: Checking whether the package is not for us Sun Nov 7 14:43:37 UTC 2021 I: Starting 1st build on remote node ionos1-amd64.debian.net. Sun Nov 7 14:43:37 UTC 2021 I: Preparing to do remote build '1' on ionos1-amd64.debian.net. Sun Nov 7 14:45:03 UTC 2021 I: Deleting $TMPDIR on ionos1-amd64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Sun Nov 7 02:43:40 -12 2021 I: pbuilder-time-stamp: 1636296220 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bullseye-reproducible-base.tgz] I: copying local configuration I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [ctdconverter_2.1-3.dsc] I: copying [./ctdconverter_2.1.orig.tar.gz] I: copying [./ctdconverter_2.1-3.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/tmp/dpkg-verify-sig.QPfLCZ2w/trustedkeys.kbx': General error gpgv: Signature made Wed Sep 30 22:28:51 2020 -12 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./ctdconverter_2.1-3.dsc dpkg-source: info: extracting ctdconverter in ctdconverter-2.1 dpkg-source: info: unpacking ctdconverter_2.1.orig.tar.gz dpkg-source: info: unpacking ctdconverter_2.1-3.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying add_setup.py.patch dpkg-source: info: applying upgrade_deprecated_strip dpkg-source: info: applying correct_name dpkg-source: info: applying py3_compat I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/544529/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='amd64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=15' DISTRIBUTION='' HOME='/root' HOST_ARCH='amd64' IFS=' ' INVOCATION_ID='b8e4175aaebe48659c7ec237cb527f7a' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='544529' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/tmp.ourC0BGxyv/pbuilderrc_Z7EG --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/tmp.ourC0BGxyv/b1 --logfile b1/build.log ctdconverter_2.1-3.dsc' SUDO_GID='110' SUDO_UID='105' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://78.137.99.97:3128' I: uname -a Linux ionos1-amd64 5.10.0-9-amd64 #1 SMP Debian 5.10.70-1 (2021-09-30) x86_64 GNU/Linux I: ls -l /bin total 5476 -rwxr-xr-x 1 root root 1234376 Aug 4 08:25 bash -rwxr-xr-x 3 root root 38984 Jul 20 2020 bunzip2 -rwxr-xr-x 3 root root 38984 Jul 20 2020 bzcat lrwxrwxrwx 1 root root 6 Jul 20 2020 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2225 Jul 20 2020 bzdiff lrwxrwxrwx 1 root root 6 Jul 20 2020 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4877 Sep 4 2019 bzexe lrwxrwxrwx 1 root root 6 Jul 20 2020 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3775 Jul 20 2020 bzgrep -rwxr-xr-x 3 root root 38984 Jul 20 2020 bzip2 -rwxr-xr-x 1 root root 18424 Jul 20 2020 bzip2recover lrwxrwxrwx 1 root root 6 Jul 20 2020 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Jul 20 2020 bzmore -rwxr-xr-x 1 root root 43936 Sep 23 2020 cat -rwxr-xr-x 1 root root 72672 Sep 23 2020 chgrp -rwxr-xr-x 1 root root 64448 Sep 23 2020 chmod -rwxr-xr-x 1 root root 72672 Sep 23 2020 chown -rwxr-xr-x 1 root root 151168 Sep 23 2020 cp -rwxr-xr-x 1 root root 125560 Dec 10 2020 dash -rwxr-xr-x 1 root root 113664 Sep 23 2020 date -rwxr-xr-x 1 root root 80968 Sep 23 2020 dd -rwxr-xr-x 1 root root 93936 Sep 23 2020 df -rwxr-xr-x 1 root root 147176 Sep 23 2020 dir -rwxr-xr-x 1 root root 84440 Jul 28 07:09 dmesg lrwxrwxrwx 1 root root 8 Nov 6 2019 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Nov 6 2019 domainname -> hostname -rwxr-xr-x 1 root root 39712 Sep 23 2020 echo -rwxr-xr-x 1 root root 28 Nov 9 2020 egrep -rwxr-xr-x 1 root root 39680 Sep 23 2020 false -rwxr-xr-x 1 root root 28 Nov 9 2020 fgrep -rwxr-xr-x 1 root root 69032 Jul 28 07:09 findmnt -rwsr-xr-x 1 root root 34896 Feb 26 2021 fusermount -rwxr-xr-x 1 root root 203072 Nov 9 2020 grep -rwxr-xr-x 2 root root 2346 Mar 2 2021 gunzip -rwxr-xr-x 1 root root 6376 Mar 2 2021 gzexe -rwxr-xr-x 1 root root 98048 Mar 2 2021 gzip -rwxr-xr-x 1 root root 22600 Nov 6 2019 hostname -rwxr-xr-x 1 root root 72840 Sep 23 2020 ln -rwxr-xr-x 1 root root 56952 Feb 7 2020 login -rwxr-xr-x 1 root root 147176 Sep 23 2020 ls -rwxr-xr-x 1 root root 149736 Jul 28 07:09 lsblk -rwxr-xr-x 1 root root 85184 Sep 23 2020 mkdir -rwxr-xr-x 1 root root 76896 Sep 23 2020 mknod -rwxr-xr-x 1 root root 48064 Sep 23 2020 mktemp -rwxr-xr-x 1 root root 59632 Jul 28 07:09 more -rwsr-xr-x 1 root root 55528 Jul 28 07:09 mount -rwxr-xr-x 1 root root 18664 Jul 28 07:09 mountpoint -rwxr-xr-x 1 root root 147080 Sep 23 2020 mv lrwxrwxrwx 1 root root 8 Nov 6 2019 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Apr 18 2021 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 43872 Sep 23 2020 pwd lrwxrwxrwx 1 root root 4 Aug 4 08:25 rbash -> bash -rwxr-xr-x 1 root root 52032 Sep 23 2020 readlink -rwxr-xr-x 1 root root 72704 Sep 23 2020 rm -rwxr-xr-x 1 root root 52032 Sep 23 2020 rmdir -rwxr-xr-x 1 root root 27472 Sep 27 2020 run-parts -rwxr-xr-x 1 root root 122224 Dec 22 2018 sed lrwxrwxrwx 1 root root 4 Oct 20 23:41 sh -> dash -rwxr-xr-x 1 root root 43808 Sep 23 2020 sleep -rwxr-xr-x 1 root root 84928 Sep 23 2020 stty -rwsr-xr-x 1 root root 71912 Jul 28 07:09 su -rwxr-xr-x 1 root root 39744 Sep 23 2020 sync -rwxr-xr-x 1 root root 531928 Feb 16 2021 tar -rwxr-xr-x 1 root root 14456 Sep 27 2020 tempfile -rwxr-xr-x 1 root root 101408 Sep 23 2020 touch -rwxr-xr-x 1 root root 39680 Sep 23 2020 true -rwxr-xr-x 1 root root 14328 Feb 26 2021 ulockmgr_server -rwsr-xr-x 1 root root 35040 Jul 28 07:09 umount -rwxr-xr-x 1 root root 39744 Sep 23 2020 uname -rwxr-xr-x 2 root root 2346 Mar 2 2021 uncompress -rwxr-xr-x 1 root root 147176 Sep 23 2020 vdir -rwxr-xr-x 1 root root 63744 Jul 28 07:09 wdctl lrwxrwxrwx 1 root root 8 Nov 6 2019 ypdomainname -> hostname -rwxr-xr-x 1 root root 1984 Mar 2 2021 zcat -rwxr-xr-x 1 root root 1678 Mar 2 2021 zcmp -rwxr-xr-x 1 root root 5880 Mar 2 2021 zdiff -rwxr-xr-x 1 root root 29 Mar 2 2021 zegrep -rwxr-xr-x 1 root root 29 Mar 2 2021 zfgrep -rwxr-xr-x 1 root root 2081 Mar 2 2021 zforce -rwxr-xr-x 1 root root 7585 Mar 2 2021 zgrep -rwxr-xr-x 1 root root 2206 Mar 2 2021 zless -rwxr-xr-x 1 root root 1842 Mar 2 2021 zmore -rwxr-xr-x 1 root root 4553 Mar 2 2021 znew I: user script /srv/workspace/pbuilder/544529/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-python, python3, python3-setuptools, python3-pkg-resources, python3-lxml, python3-ruamel.yaml, python3-ctdopts, help2man, 2to3 dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19655 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-python; however: Package dh-python is not installed. pbuilder-satisfydepends-dummy depends on python3; however: Package python3 is not installed. pbuilder-satisfydepends-dummy depends on python3-setuptools; however: Package python3-setuptools is not installed. pbuilder-satisfydepends-dummy depends on python3-pkg-resources; however: Package python3-pkg-resources is not installed. pbuilder-satisfydepends-dummy depends on python3-lxml; however: Package python3-lxml is not installed. pbuilder-satisfydepends-dummy depends on python3-ruamel.yaml; however: Package python3-ruamel.yaml is not installed. pbuilder-satisfydepends-dummy depends on python3-ctdopts; however: Package python3-ctdopts is not installed. pbuilder-satisfydepends-dummy depends on help2man; however: Package help2man is not installed. pbuilder-satisfydepends-dummy depends on 2to3; however: Package 2to3 is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: 2to3{a} autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} help2man{a} intltool-debian{a} libarchive-zip-perl{a} libdebhelper-perl{a} libelf1{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libicu67{a} liblocale-gettext-perl{a} libmagic-mgc{a} libmagic1{a} libmpdec3{a} libpipeline1{a} libpython3-stdlib{a} libpython3.9-minimal{a} libpython3.9-stdlib{a} libreadline8{a} libsigsegv2{a} libsub-override-perl{a} libtool{a} libuchardet0{a} libxml2{a} libxslt1.1{a} m4{a} man-db{a} media-types{a} po-debconf{a} python3{a} python3-ctdopts{a} python3-distutils{a} python3-lib2to3{a} python3-lxml{a} python3-minimal{a} python3-pkg-resources{a} python3-ruamel.yaml{a} python3-ruamel.yaml.clib{a} python3-setuptools{a} python3-tz{a} python3.9{a} python3.9-minimal{a} readline-common{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx python3-bs4 python3-html5lib wget 0 packages upgraded, 57 newly installed, 0 to remove and 0 not upgraded. Need to get 26.5 MB of archives. After unpacking 98.8 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian bullseye/main amd64 bsdextrautils amd64 2.36.1-8 [145 kB] Get: 2 http://deb.debian.org/debian bullseye/main amd64 libuchardet0 amd64 0.0.7-1 [67.8 kB] Get: 3 http://deb.debian.org/debian bullseye/main amd64 groff-base amd64 1.22.4-6 [936 kB] Get: 4 http://deb.debian.org/debian bullseye/main amd64 libpipeline1 amd64 1.5.3-1 [34.3 kB] Get: 5 http://deb.debian.org/debian bullseye/main amd64 man-db amd64 2.9.4-2 [1354 kB] Get: 6 http://deb.debian.org/debian bullseye/main amd64 liblocale-gettext-perl amd64 1.07-4+b1 [19.0 kB] Get: 7 http://deb.debian.org/debian bullseye/main amd64 libpython3.9-minimal amd64 3.9.2-1 [801 kB] Get: 8 http://deb.debian.org/debian bullseye/main amd64 libexpat1 amd64 2.2.10-2 [96.9 kB] Get: 9 http://deb.debian.org/debian bullseye/main amd64 python3.9-minimal amd64 3.9.2-1 [1955 kB] Get: 10 http://deb.debian.org/debian bullseye/main amd64 python3-minimal amd64 3.9.2-3 [38.2 kB] Get: 11 http://deb.debian.org/debian bullseye/main amd64 media-types all 4.0.0 [30.3 kB] Get: 12 http://deb.debian.org/debian bullseye/main amd64 libmpdec3 amd64 2.5.1-1 [87.7 kB] Get: 13 http://deb.debian.org/debian bullseye/main amd64 readline-common all 8.1-1 [73.7 kB] Get: 14 http://deb.debian.org/debian bullseye/main amd64 libreadline8 amd64 8.1-1 [169 kB] Get: 15 http://deb.debian.org/debian bullseye/main amd64 libpython3.9-stdlib amd64 3.9.2-1 [1684 kB] Get: 16 http://deb.debian.org/debian bullseye/main amd64 python3.9 amd64 3.9.2-1 [466 kB] Get: 17 http://deb.debian.org/debian bullseye/main amd64 libpython3-stdlib amd64 3.9.2-3 [21.4 kB] Get: 18 http://deb.debian.org/debian bullseye/main amd64 python3 amd64 3.9.2-3 [37.9 kB] Get: 19 http://deb.debian.org/debian bullseye/main amd64 sensible-utils all 0.0.14 [14.8 kB] Get: 20 http://deb.debian.org/debian bullseye/main amd64 libmagic-mgc amd64 1:5.39-3 [273 kB] Get: 21 http://deb.debian.org/debian bullseye/main amd64 libmagic1 amd64 1:5.39-3 [126 kB] Get: 22 http://deb.debian.org/debian bullseye/main amd64 file amd64 1:5.39-3 [69.1 kB] Get: 23 http://deb.debian.org/debian bullseye/main amd64 gettext-base amd64 0.21-4 [175 kB] Get: 24 http://deb.debian.org/debian bullseye/main amd64 python3-lib2to3 all 3.9.2-1 [77.8 kB] Get: 25 http://deb.debian.org/debian bullseye/main amd64 2to3 all 3.9.2-3 [22.4 kB] Get: 26 http://deb.debian.org/debian bullseye/main amd64 libsigsegv2 amd64 2.13-1 [34.8 kB] Get: 27 http://deb.debian.org/debian bullseye/main amd64 m4 amd64 1.4.18-5 [204 kB] Get: 28 http://deb.debian.org/debian bullseye/main amd64 autoconf all 2.69-14 [313 kB] Get: 29 http://deb.debian.org/debian bullseye/main amd64 autotools-dev all 20180224.1+nmu1 [77.1 kB] Get: 30 http://deb.debian.org/debian bullseye/main amd64 automake all 1:1.16.3-2 [814 kB] Get: 31 http://deb.debian.org/debian bullseye/main amd64 autopoint all 0.21-4 [510 kB] Get: 32 http://deb.debian.org/debian bullseye/main amd64 libdebhelper-perl all 13.3.4 [189 kB] Get: 33 http://deb.debian.org/debian bullseye/main amd64 libtool all 2.4.6-15 [513 kB] Get: 34 http://deb.debian.org/debian bullseye/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 35 http://deb.debian.org/debian bullseye/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 36 http://deb.debian.org/debian bullseye/main amd64 libsub-override-perl all 0.09-2 [10.2 kB] Get: 37 http://deb.debian.org/debian bullseye/main amd64 libfile-stripnondeterminism-perl all 1.12.0-1 [26.3 kB] Get: 38 http://deb.debian.org/debian bullseye/main amd64 dh-strip-nondeterminism all 1.12.0-1 [15.4 kB] Get: 39 http://deb.debian.org/debian bullseye/main amd64 libelf1 amd64 0.183-1 [165 kB] Get: 40 http://deb.debian.org/debian bullseye/main amd64 dwz amd64 0.13+20210201-1 [175 kB] Get: 41 http://deb.debian.org/debian bullseye/main amd64 libicu67 amd64 67.1-7 [8622 kB] Get: 42 http://deb.debian.org/debian bullseye/main amd64 libxml2 amd64 2.9.10+dfsg-6.7 [693 kB] Get: 43 http://deb.debian.org/debian bullseye/main amd64 gettext amd64 0.21-4 [1311 kB] Get: 44 http://deb.debian.org/debian bullseye/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get: 45 http://deb.debian.org/debian bullseye/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 46 http://deb.debian.org/debian bullseye/main amd64 debhelper all 13.3.4 [1049 kB] Get: 47 http://deb.debian.org/debian bullseye/main amd64 python3-distutils all 3.9.2-1 [143 kB] Get: 48 http://deb.debian.org/debian bullseye/main amd64 dh-python all 4.20201102+nmu1 [99.4 kB] Get: 49 http://deb.debian.org/debian bullseye/main amd64 help2man amd64 1.48.1 [190 kB] Get: 50 http://deb.debian.org/debian bullseye/main amd64 libxslt1.1 amd64 1.1.34-4 [239 kB] Get: 51 http://deb.debian.org/debian bullseye/main amd64 python3-tz all 2021.1-1 [34.8 kB] Get: 52 http://deb.debian.org/debian bullseye/main amd64 python3-ctdopts all 1.4-2 [22.5 kB] Get: 53 http://deb.debian.org/debian bullseye/main amd64 python3-lxml amd64 4.6.3+dfsg-0.1 [1091 kB] Get: 54 http://deb.debian.org/debian bullseye/main amd64 python3-pkg-resources all 52.0.0-4 [190 kB] Get: 55 http://deb.debian.org/debian bullseye/main amd64 python3-ruamel.yaml.clib amd64 0.2.2-1+b2 [132 kB] Get: 56 http://deb.debian.org/debian bullseye/main amd64 python3-ruamel.yaml all 0.16.12-2 [110 kB] Get: 57 http://deb.debian.org/debian bullseye/main amd64 python3-setuptools all 52.0.0-4 [366 kB] Fetched 26.5 MB in 1s (34.2 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package bsdextrautils. 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Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/ctdconverter-2.1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../ctdconverter_2.1-3_source.changes dpkg-buildpackage: info: source package ctdconverter dpkg-buildpackage: info: source version 2.1-3 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 debian/rules clean dh clean --with python3 --buildsystem=pybuild dh_auto_clean -O--buildsystem=pybuild I: pybuild base:232: python3.9 setup.py clean running clean removing '/build/ctdconverter-2.1/.pybuild/cpython3_3.9_ctdconverter/build' (and everything under it) 'build/bdist.linux-x86_64' does not exist -- can't clean it 'build/scripts-3.9' does not exist -- can't clean it dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild debian/rules binary dh binary --with python3 --buildsystem=pybuild dh_update_autotools_config -O--buildsystem=pybuild dh_autoreconf -O--buildsystem=pybuild dh_auto_configure -O--buildsystem=pybuild I: pybuild base:232: python3.9 setup.py config running config debian/rules override_dh_auto_build make[1]: Entering directory '/build/ctdconverter-2.1' 2to3 --write --nobackups --no-diffs convert.py galaxy/ cwl/ common/ RefactoringTool: Skipping optional fixer: buffer RefactoringTool: Skipping optional fixer: idioms RefactoringTool: Skipping optional fixer: set_literal RefactoringTool: Skipping optional fixer: ws_comma RefactoringTool: Refactored convert.py RefactoringTool: Refactored galaxy/converter.py RefactoringTool: No changes to cwl/converter.py RefactoringTool: No changes to common/exceptions.py RefactoringTool: No changes to common/logger.py RefactoringTool: Refactored common/utils.py RefactoringTool: Files that were modified: RefactoringTool: convert.py RefactoringTool: galaxy/converter.py RefactoringTool: cwl/converter.py RefactoringTool: common/exceptions.py RefactoringTool: common/logger.py RefactoringTool: common/utils.py dh_auto_build I: pybuild base:232: /usr/bin/python3 setup.py build running build running build_py copying convert.py -> /build/ctdconverter-2.1/.pybuild/cpython3_3.9_ctdconverter/build creating /build/ctdconverter-2.1/.pybuild/cpython3_3.9_ctdconverter/build/galaxy copying galaxy/converter.py -> /build/ctdconverter-2.1/.pybuild/cpython3_3.9_ctdconverter/build/galaxy copying galaxy/__init__.py -> /build/ctdconverter-2.1/.pybuild/cpython3_3.9_ctdconverter/build/galaxy creating /build/ctdconverter-2.1/.pybuild/cpython3_3.9_ctdconverter/build/cwl copying cwl/converter.py -> /build/ctdconverter-2.1/.pybuild/cpython3_3.9_ctdconverter/build/cwl copying cwl/__init__.py -> /build/ctdconverter-2.1/.pybuild/cpython3_3.9_ctdconverter/build/cwl creating /build/ctdconverter-2.1/.pybuild/cpython3_3.9_ctdconverter/build/common copying common/utils.py -> /build/ctdconverter-2.1/.pybuild/cpython3_3.9_ctdconverter/build/common copying common/logger.py -> /build/ctdconverter-2.1/.pybuild/cpython3_3.9_ctdconverter/build/common copying common/exceptions.py -> /build/ctdconverter-2.1/.pybuild/cpython3_3.9_ctdconverter/build/common copying common/__init__.py -> /build/ctdconverter-2.1/.pybuild/cpython3_3.9_ctdconverter/build/common make[1]: Leaving directory '/build/ctdconverter-2.1' dh_auto_test -O--buildsystem=pybuild I: pybuild base:232: cd /build/ctdconverter-2.1/.pybuild/cpython3_3.9_ctdconverter/build; python3.9 -m unittest discover -v ---------------------------------------------------------------------- Ran 0 tests in 0.000s OK create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=pybuild dh_prep -O--buildsystem=pybuild dh_auto_install -O--buildsystem=pybuild I: pybuild base:232: /usr/bin/python3 setup.py install --root /build/ctdconverter-2.1/debian/ctdconverter running install running build running build_py running install_lib creating /build/ctdconverter-2.1/debian/ctdconverter/usr creating /build/ctdconverter-2.1/debian/ctdconverter/usr/lib creating /build/ctdconverter-2.1/debian/ctdconverter/usr/lib/python3.9 creating /build/ctdconverter-2.1/debian/ctdconverter/usr/lib/python3.9/dist-packages creating /build/ctdconverter-2.1/debian/ctdconverter/usr/lib/python3.9/dist-packages/common creating /build/ctdconverter-2.1/debian/ctdconverter/usr/lib/python3.9/dist-packages/common/__pycache__ copying /build/ctdconverter-2.1/.pybuild/cpython3_3.9_ctdconverter/build/common/__pycache__/__init__.cpython-39.pyc -> /build/ctdconverter-2.1/debian/ctdconverter/usr/lib/python3.9/dist-packages/common/__pycache__ copying /build/ctdconverter-2.1/.pybuild/cpython3_3.9_ctdconverter/build/common/__init__.py -> /build/ctdconverter-2.1/debian/ctdconverter/usr/lib/python3.9/dist-packages/common copying /build/ctdconverter-2.1/.pybuild/cpython3_3.9_ctdconverter/build/common/exceptions.py -> /build/ctdconverter-2.1/debian/ctdconverter/usr/lib/python3.9/dist-packages/common copying /build/ctdconverter-2.1/.pybuild/cpython3_3.9_ctdconverter/build/common/logger.py -> /build/ctdconverter-2.1/debian/ctdconverter/usr/lib/python3.9/dist-packages/common copying /build/ctdconverter-2.1/.pybuild/cpython3_3.9_ctdconverter/build/common/utils.py -> /build/ctdconverter-2.1/debian/ctdconverter/usr/lib/python3.9/dist-packages/common creating /build/ctdconverter-2.1/debian/ctdconverter/usr/lib/python3.9/dist-packages/cwl creating /build/ctdconverter-2.1/debian/ctdconverter/usr/lib/python3.9/dist-packages/cwl/__pycache__ copying /build/ctdconverter-2.1/.pybuild/cpython3_3.9_ctdconverter/build/cwl/__pycache__/__init__.cpython-39.pyc -> /build/ctdconverter-2.1/debian/ctdconverter/usr/lib/python3.9/dist-packages/cwl/__pycache__ copying /build/ctdconverter-2.1/.pybuild/cpython3_3.9_ctdconverter/build/cwl/__init__.py -> /build/ctdconverter-2.1/debian/ctdconverter/usr/lib/python3.9/dist-packages/cwl copying /build/ctdconverter-2.1/.pybuild/cpython3_3.9_ctdconverter/build/cwl/converter.py -> /build/ctdconverter-2.1/debian/ctdconverter/usr/lib/python3.9/dist-packages/cwl creating /build/ctdconverter-2.1/debian/ctdconverter/usr/lib/python3.9/dist-packages/galaxy creating /build/ctdconverter-2.1/debian/ctdconverter/usr/lib/python3.9/dist-packages/galaxy/__pycache__ copying /build/ctdconverter-2.1/.pybuild/cpython3_3.9_ctdconverter/build/galaxy/__pycache__/__init__.cpython-39.pyc -> /build/ctdconverter-2.1/debian/ctdconverter/usr/lib/python3.9/dist-packages/galaxy/__pycache__ copying /build/ctdconverter-2.1/.pybuild/cpython3_3.9_ctdconverter/build/galaxy/__init__.py -> /build/ctdconverter-2.1/debian/ctdconverter/usr/lib/python3.9/dist-packages/galaxy copying /build/ctdconverter-2.1/.pybuild/cpython3_3.9_ctdconverter/build/galaxy/converter.py -> /build/ctdconverter-2.1/debian/ctdconverter/usr/lib/python3.9/dist-packages/galaxy copying /build/ctdconverter-2.1/.pybuild/cpython3_3.9_ctdconverter/build/convert.py -> /build/ctdconverter-2.1/debian/ctdconverter/usr/lib/python3.9/dist-packages byte-compiling /build/ctdconverter-2.1/debian/ctdconverter/usr/lib/python3.9/dist-packages/common/__init__.py to __init__.cpython-39.pyc byte-compiling /build/ctdconverter-2.1/debian/ctdconverter/usr/lib/python3.9/dist-packages/common/exceptions.py to exceptions.cpython-39.pyc byte-compiling /build/ctdconverter-2.1/debian/ctdconverter/usr/lib/python3.9/dist-packages/common/logger.py to logger.cpython-39.pyc byte-compiling /build/ctdconverter-2.1/debian/ctdconverter/usr/lib/python3.9/dist-packages/common/utils.py to utils.cpython-39.pyc byte-compiling /build/ctdconverter-2.1/debian/ctdconverter/usr/lib/python3.9/dist-packages/cwl/__init__.py to __init__.cpython-39.pyc byte-compiling /build/ctdconverter-2.1/debian/ctdconverter/usr/lib/python3.9/dist-packages/cwl/converter.py to converter.cpython-39.pyc byte-compiling /build/ctdconverter-2.1/debian/ctdconverter/usr/lib/python3.9/dist-packages/galaxy/__init__.py to __init__.cpython-39.pyc byte-compiling /build/ctdconverter-2.1/debian/ctdconverter/usr/lib/python3.9/dist-packages/galaxy/converter.py to converter.cpython-39.pyc /usr/lib/python3.9/dist-packages/galaxy/converter.py:397: SyntaxWarning: "is" with a literal. Did you mean "=="? byte-compiling /build/ctdconverter-2.1/debian/ctdconverter/usr/lib/python3.9/dist-packages/convert.py to convert.cpython-39.pyc running install_egg_info running egg_info creating ctdconverter.egg-info writing ctdconverter.egg-info/PKG-INFO writing dependency_links to ctdconverter.egg-info/dependency_links.txt writing entry points to ctdconverter.egg-info/entry_points.txt writing requirements to ctdconverter.egg-info/requires.txt writing top-level names to ctdconverter.egg-info/top_level.txt writing manifest file 'ctdconverter.egg-info/SOURCES.txt' reading manifest file 'ctdconverter.egg-info/SOURCES.txt' writing manifest file 'ctdconverter.egg-info/SOURCES.txt' Copying ctdconverter.egg-info to /build/ctdconverter-2.1/debian/ctdconverter/usr/lib/python3.9/dist-packages/ctdconverter-2.0.egg-info Skipping SOURCES.txt running install_scripts Installing CTDConverter script to /build/ctdconverter-2.1/debian/ctdconverter/usr/bin dh_installdocs -O--buildsystem=pybuild dh_installchangelogs -O--buildsystem=pybuild debian/rules override_dh_installman make[1]: Entering directory '/build/ctdconverter-2.1' help2man 'python3 convert.py' --include=debian/CTDConverter.help2man \ --no-info --version-string="2.1" \ --output=debian/CTDConverter.1 dh_installman make[1]: Leaving directory '/build/ctdconverter-2.1' dh_python3 -O--buildsystem=pybuild dh_installsystemduser -O--buildsystem=pybuild dh_perl -O--buildsystem=pybuild dh_link -O--buildsystem=pybuild dh_strip_nondeterminism -O--buildsystem=pybuild dh_compress -O--buildsystem=pybuild dh_fixperms -O--buildsystem=pybuild dh_missing -O--buildsystem=pybuild dh_installdeb -O--buildsystem=pybuild dh_gencontrol -O--buildsystem=pybuild dh_md5sums -O--buildsystem=pybuild dh_builddeb -O--buildsystem=pybuild dpkg-deb: building package 'ctdconverter' in '../ctdconverter_2.1-3_all.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../ctdconverter_2.1-3_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/544529 and its subdirectories I: Current time: Sun Nov 7 02:45:02 -12 2021 I: pbuilder-time-stamp: 1636296302 Sun Nov 7 14:45:03 UTC 2021 I: 1st build successful. Starting 2nd build on remote node ionos5-amd64.debian.net. Sun Nov 7 14:45:03 UTC 2021 I: Preparing to do remote build '2' on ionos5-amd64.debian.net. Sun Nov 7 14:45:42 UTC 2021 I: Deleting $TMPDIR on ionos5-amd64.debian.net. Sun Nov 7 14:45:43 UTC 2021 I: ctdconverter_2.1-3_amd64.changes: Format: 1.8 Date: Thu, 01 Oct 2020 11:29:40 +0200 Source: ctdconverter Binary: ctdconverter Architecture: all Version: 2.1-3 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: ctdconverter - Convert CTD files into Galaxy tool and CWL CommandLineTool files Closes: 971459 Changes: ctdconverter (2.1-3) unstable; urgency=medium . * Team upload. * Restrictions: superficial Closes: #971459 * debhelper-compat 13 (routine-update) Checksums-Sha1: 31692c8bd471430695d7742365223165d0c57eac 27784 ctdconverter_2.1-3_all.deb afaf54993b4a1eb324a920434ec61ce9f9e2cfef 5602 ctdconverter_2.1-3_amd64.buildinfo Checksums-Sha256: 417fdc8a2cc7715e4e9f8811dcfa0739049d5df4ab462d90e75baf7a4d7bce5b 27784 ctdconverter_2.1-3_all.deb e5ddf412aae2b44d35e96e440ff10056bbead525214005c1d96fc5f133dcca61 5602 ctdconverter_2.1-3_amd64.buildinfo Files: b920ce133ad50574d77ec2f75e337225 27784 science optional ctdconverter_2.1-3_all.deb a53db561871ca5599d1c88518069db21 5602 science optional ctdconverter_2.1-3_amd64.buildinfo Sun Nov 7 14:45:44 UTC 2021 I: will be used to compare the two builds: # Profiling output for: /usr/bin/diffoscope --html /srv/reproducible-results/rbuild-debian/tmp.ourC0BGxyv/ctdconverter_2.1-3.diffoscope.html --text /srv/reproducible-results/rbuild-debian/tmp.ourC0BGxyv/ctdconverter_2.1-3.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/tmp.ourC0BGxyv/ctdconverter_2.1-3.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/tmp.ourC0BGxyv/b1/ctdconverter_2.1-3_amd64.changes /srv/reproducible-results/rbuild-debian/tmp.ourC0BGxyv/b2/ctdconverter_2.1-3_amd64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.242s) 0.242s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.016s) 0.016s 10 calls diffoscope.comparators.binary.FilesystemFile 0.000s 8 calls abc.DotChangesFile Sun Nov 7 14:45:45 UTC 2021 I: found no differences in the changes files, and a .buildinfo file also exists. Sun Nov 7 14:45:45 UTC 2021 I: ctdconverter from bullseye built successfully and reproducibly on amd64. Sun Nov 7 14:45:46 UTC 2021 I: Submitting .buildinfo files to external archives: Sun Nov 7 14:45:46 UTC 2021 I: Submitting 8.0K b1/ctdconverter_2.1-3_amd64.buildinfo.asc Sun Nov 7 14:45:48 UTC 2021 I: Submitting 8.0K b2/ctdconverter_2.1-3_amd64.buildinfo.asc Sun Nov 7 14:45:50 UTC 2021 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Sun Nov 7 14:45:50 UTC 2021 I: Done submitting .buildinfo files. Sun Nov 7 14:45:50 UTC 2021 I: Removing signed ctdconverter_2.1-3_amd64.buildinfo.asc files: removed './b1/ctdconverter_2.1-3_amd64.buildinfo.asc' removed './b2/ctdconverter_2.1-3_amd64.buildinfo.asc'