Thu Aug 1 11:54:21 UTC 2024 I: starting to build adapterremoval/bullseye/amd64 on jenkins on '2024-08-01 11:54' Thu Aug 1 11:54:21 UTC 2024 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/amd64_9/12975/console.log Thu Aug 1 11:54:21 UTC 2024 I: Downloading source for bullseye/adapterremoval=2.3.1-3 --2024-08-01 11:54:21-- http://cdn-fastly.deb.debian.org/debian/pool/main/a/adapterremoval/adapterremoval_2.3.1-3.dsc Connecting to 46.16.76.132:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2211 (2.2K) [text/prs.lines.tag] Saving to: ‘adapterremoval_2.3.1-3.dsc’ 0K .. 100% 340M=0s 2024-08-01 11:54:21 (340 MB/s) - ‘adapterremoval_2.3.1-3.dsc’ saved [2211/2211] Thu Aug 1 11:54:21 UTC 2024 I: adapterremoval_2.3.1-3.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: adapterremoval Binary: adapterremoval, adapterremoval-examples Architecture: any all Version: 2.3.1-3 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille , Kevin Murray Homepage: https://github.com/MikkelSchubert/adapterremoval Standards-Version: 4.4.1 Vcs-Browser: https://salsa.debian.org/med-team/adapterremoval Vcs-Git: https://salsa.debian.org/med-team/adapterremoval.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 12), zlib1g-dev, libbz2-dev, libgtest-dev, markdown Package-List: adapterremoval deb science optional arch=any adapterremoval-examples deb science optional arch=all Checksums-Sha1: c89e2e8f5d11be30b3b5530c1f567df92c914b4d 1847061 adapterremoval_2.3.1.orig.tar.gz c2979fce39fa9a1e02594d9556f8b354e04022c3 10800 adapterremoval_2.3.1-3.debian.tar.xz Checksums-Sha256: 2ce750372e1a2e786484807034b321a2593827d5a783454541e0b3c9f788eb3b 1847061 adapterremoval_2.3.1.orig.tar.gz c8f59f7335a4173e3c2bbca79630192458f6527ef9fc19598b7f5eb814d6da25 10800 adapterremoval_2.3.1-3.debian.tar.xz Files: a07702f77c25c1f13635333632fe8af7 1847061 adapterremoval_2.3.1.orig.tar.gz 5ce4db0eb9f0efc226ac65adc3514ab0 10800 adapterremoval_2.3.1-3.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAl4YkagRHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtGrQw/5AecuLRU8kh6D4S2Lto+IXy2wM/dIkYQi Uli/+sSDmNLHVqKmQ16PKYnpjF2HeHr/v0SYGDZCs8b6JtgTq9SHaUYkql9o4x+9 lBUo9u2CBNWf8/e5oQ9uTNVtYZsxquqBLtYdEnIEoKP9F5WgiC4Pg0Mz6zchRz8S rWvIS0LyGhQ3wr1M6kW64atDjzl8Hs4qo78GcDEN59aDNE/adB1jLcY6jkBAA6cV 1Wy1Ck8znN8ggTKDegyf89Zq5+JpylxPwaCrjiyga5WXUtqWJ5UNdmBCaIMm2e8B OG41FrTQO9NuwElwahsHCm7bgimRJu0sFUgNcP05NipvmWCbbaMBmIz7enNph/+f nl2s87m8WD1lbaD78L7800ILNVgVB8FeCLPiT5XAqnWsaBOCwH2BbMcK8lwTQIhA geqP+o1QaypyrztinkMlolAzYiyiYSKlM7oCiD9VKJDkJvu3Hm1046SdtJ7jmpNv rsOEQU4pSZDdfXV8/HWivm1sDEXbATDYtQsFbg78ks49LRMxg+uJc08OC4PPVGQv vD0qUnrRHRsnCu9t7G3X0aTYBkRKFG4yxbD0kKXa9Vjnios45EWeHiKM+r7PA2PA HtgiRVp9XWuErlWh6Cu7RdUqBZcMnNTSjGLpbZ4Fz3DcM4eX5fwUb0qze4rTixpC Hb7HY6YVwBo= =FrQW -----END PGP SIGNATURE----- Thu Aug 1 11:54:21 UTC 2024 I: Checking whether the package is not for us Thu Aug 1 11:54:21 UTC 2024 I: Starting 1st build on remote node ionos1-amd64.debian.net. Thu Aug 1 11:54:21 UTC 2024 I: Preparing to do remote build '1' on ionos1-amd64.debian.net. Thu Aug 1 11:58:24 UTC 2024 I: Deleting $TMPDIR on ionos1-amd64.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Wed Jul 31 23:54:23 -12 2024 I: pbuilder-time-stamp: 1722513263 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bullseye-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: Copying source file I: copying [adapterremoval_2.3.1-3.dsc] I: copying [./adapterremoval_2.3.1.orig.tar.gz] I: copying [./adapterremoval_2.3.1-3.debian.tar.xz] I: Extracting source gpgv: unknown type of key resource 'trustedkeys.kbx' gpgv: keyblock resource '/tmp/dpkg-verify-sig.koIuUI1Y/trustedkeys.kbx': General error gpgv: Signature made Fri Jan 10 03:00:56 2020 -12 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./adapterremoval_2.3.1-3.dsc dpkg-source: info: extracting adapterremoval in adapterremoval-2.3.1 dpkg-source: info: unpacking adapterremoval_2.3.1.orig.tar.gz dpkg-source: info: unpacking adapterremoval_2.3.1-3.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying adapt-benchmarking.patch dpkg-source: info: applying reduce_benchmark_length.patch dpkg-source: info: applying delete_adapterremoval1x_completely.patch dpkg-source: info: applying 2to3.patch dpkg-source: info: applying fix_conversion.patch I: using fakeroot in build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/3592110/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build/reproducible-path' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='amd64' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all,-fixfilepath parallel=20 ' DISTRIBUTION='bullseye' HOME='/root' HOST_ARCH='amd64' IFS=' ' INVOCATION_ID='de37c80b99ca4c6d87ec6b70cc0e22e1' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='3592110' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.hcM5ykA4/pbuilderrc_A0oh --distribution bullseye --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bullseye-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.hcM5ykA4/b1 --logfile b1/build.log adapterremoval_2.3.1-3.dsc' SUDO_GID='110' SUDO_UID='105' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://46.16.76.132:3128' I: uname -a Linux ionos1-amd64 6.1.0-23-amd64 #1 SMP PREEMPT_DYNAMIC Debian 6.1.99-1 (2024-07-15) x86_64 GNU/Linux I: ls -l /bin total 5476 -rwxr-xr-x 1 root root 1234376 Mar 27 2022 bash -rwxr-xr-x 3 root root 38984 Jul 20 2020 bunzip2 -rwxr-xr-x 3 root root 38984 Jul 20 2020 bzcat lrwxrwxrwx 1 root root 6 Jul 20 2020 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2225 Jul 20 2020 bzdiff lrwxrwxrwx 1 root root 6 Jul 20 2020 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4877 Sep 4 2019 bzexe lrwxrwxrwx 1 root root 6 Jul 20 2020 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3775 Jul 20 2020 bzgrep -rwxr-xr-x 3 root root 38984 Jul 20 2020 bzip2 -rwxr-xr-x 1 root root 18424 Jul 20 2020 bzip2recover lrwxrwxrwx 1 root root 6 Jul 20 2020 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Jul 20 2020 bzmore -rwxr-xr-x 1 root root 43936 Sep 23 2020 cat -rwxr-xr-x 1 root root 72672 Sep 23 2020 chgrp -rwxr-xr-x 1 root root 64448 Sep 23 2020 chmod -rwxr-xr-x 1 root root 72672 Sep 23 2020 chown -rwxr-xr-x 1 root root 151168 Sep 23 2020 cp -rwxr-xr-x 1 root root 125560 Dec 10 2020 dash -rwxr-xr-x 1 root root 113664 Sep 23 2020 date -rwxr-xr-x 1 root root 80968 Sep 23 2020 dd -rwxr-xr-x 1 root root 93936 Sep 23 2020 df -rwxr-xr-x 1 root root 147176 Sep 23 2020 dir -rwxr-xr-x 1 root root 84440 Mar 27 22:09 dmesg lrwxrwxrwx 1 root root 8 Nov 6 2019 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Nov 6 2019 domainname -> hostname -rwxr-xr-x 1 root root 39712 Sep 23 2020 echo -rwxr-xr-x 1 root root 28 Jan 24 2023 egrep -rwxr-xr-x 1 root root 39680 Sep 23 2020 false -rwxr-xr-x 1 root root 28 Jan 24 2023 fgrep -rwxr-xr-x 1 root root 69032 Mar 27 22:09 findmnt -rwsr-xr-x 1 root root 34896 Feb 26 2021 fusermount -rwxr-xr-x 1 root root 203072 Jan 24 2023 grep -rwxr-xr-x 2 root root 2346 Apr 9 2022 gunzip -rwxr-xr-x 1 root root 6447 Apr 9 2022 gzexe -rwxr-xr-x 1 root root 98048 Apr 9 2022 gzip -rwxr-xr-x 1 root root 22600 Nov 6 2019 hostname -rwxr-xr-x 1 root root 72840 Sep 23 2020 ln -rwxr-xr-x 1 root root 56952 Feb 7 2020 login -rwxr-xr-x 1 root root 147176 Sep 23 2020 ls -rwxr-xr-x 1 root root 149736 Mar 27 22:09 lsblk -rwxr-xr-x 1 root root 85184 Sep 23 2020 mkdir -rwxr-xr-x 1 root root 76896 Sep 23 2020 mknod -rwxr-xr-x 1 root root 48064 Sep 23 2020 mktemp -rwxr-xr-x 1 root root 59632 Mar 27 22:09 more -rwsr-xr-x 1 root root 55528 Mar 27 22:09 mount -rwxr-xr-x 1 root root 18664 Mar 27 22:09 mountpoint -rwxr-xr-x 1 root root 147080 Sep 23 2020 mv lrwxrwxrwx 1 root root 8 Nov 6 2019 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Dec 16 2021 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 43872 Sep 23 2020 pwd lrwxrwxrwx 1 root root 4 Mar 27 2022 rbash -> bash -rwxr-xr-x 1 root root 52032 Sep 23 2020 readlink -rwxr-xr-x 1 root root 72704 Sep 23 2020 rm -rwxr-xr-x 1 root root 52032 Sep 23 2020 rmdir -rwxr-xr-x 1 root root 27472 Sep 27 2020 run-parts -rwxr-xr-x 1 root root 122224 Dec 22 2018 sed lrwxrwxrwx 1 root root 4 Jul 6 21:26 sh -> dash -rwxr-xr-x 1 root root 43808 Sep 23 2020 sleep -rwxr-xr-x 1 root root 84928 Sep 23 2020 stty -rwsr-xr-x 1 root root 71912 Mar 27 22:09 su -rwxr-xr-x 1 root root 39744 Sep 23 2020 sync -rwxr-xr-x 1 root root 531928 Jan 19 2024 tar -rwxr-xr-x 1 root root 14456 Sep 27 2020 tempfile -rwxr-xr-x 1 root root 101408 Sep 23 2020 touch -rwxr-xr-x 1 root root 39680 Sep 23 2020 true -rwxr-xr-x 1 root root 14328 Feb 26 2021 ulockmgr_server -rwsr-xr-x 1 root root 35040 Mar 27 22:09 umount -rwxr-xr-x 1 root root 39744 Sep 23 2020 uname -rwxr-xr-x 2 root root 2346 Apr 9 2022 uncompress -rwxr-xr-x 1 root root 147176 Sep 23 2020 vdir -rwxr-xr-x 1 root root 63744 Mar 27 22:09 wdctl lrwxrwxrwx 1 root root 8 Nov 6 2019 ypdomainname -> hostname -rwxr-xr-x 1 root root 1984 Apr 9 2022 zcat -rwxr-xr-x 1 root root 1678 Apr 9 2022 zcmp -rwxr-xr-x 1 root root 5898 Apr 9 2022 zdiff -rwxr-xr-x 1 root root 29 Apr 9 2022 zegrep -rwxr-xr-x 1 root root 29 Apr 9 2022 zfgrep -rwxr-xr-x 1 root root 2081 Apr 9 2022 zforce -rwxr-xr-x 1 root root 8049 Apr 9 2022 zgrep -rwxr-xr-x 1 root root 2206 Apr 9 2022 zless -rwxr-xr-x 1 root root 1842 Apr 9 2022 zmore -rwxr-xr-x 1 root root 4577 Apr 9 2022 znew I: user script /srv/workspace/pbuilder/3592110/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: amd64 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 12), zlib1g-dev, libbz2-dev, libgtest-dev, markdown dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19711 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 12); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on zlib1g-dev; however: Package zlib1g-dev is not installed. pbuilder-satisfydepends-dummy depends on libbz2-dev; however: Package libbz2-dev is not installed. pbuilder-satisfydepends-dummy depends on libgtest-dev; however: Package libgtest-dev is not installed. pbuilder-satisfydepends-dummy depends on markdown; however: Package markdown is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} googletest{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libbz2-dev{a} libdebhelper-perl{a} libelf1{a} libfile-stripnondeterminism-perl{a} libgtest-dev{a} libicu67{a} libmagic-mgc{a} libmagic1{a} libpipeline1{a} libsigsegv2{a} libsub-override-perl{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} markdown{a} po-debconf{a} sensible-utils{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: bzip2-doc curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 36 newly installed, 0 to remove and 0 not upgraded. Need to get 19.4 MB of archives. After unpacking 74.0 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian bullseye/main amd64 bsdextrautils amd64 2.36.1-8+deb11u2 [146 kB] Get: 2 http://deb.debian.org/debian bullseye/main amd64 libuchardet0 amd64 0.0.7-1 [67.8 kB] Get: 3 http://deb.debian.org/debian bullseye/main amd64 groff-base amd64 1.22.4-6 [936 kB] Get: 4 http://deb.debian.org/debian bullseye/main amd64 libpipeline1 amd64 1.5.3-1 [34.3 kB] Get: 5 http://deb.debian.org/debian bullseye/main amd64 man-db amd64 2.9.4-2 [1354 kB] Get: 6 http://deb.debian.org/debian bullseye/main amd64 sensible-utils all 0.0.14 [14.8 kB] Get: 7 http://deb.debian.org/debian bullseye/main amd64 libmagic-mgc amd64 1:5.39-3+deb11u1 [273 kB] Get: 8 http://deb.debian.org/debian bullseye/main amd64 libmagic1 amd64 1:5.39-3+deb11u1 [128 kB] Get: 9 http://deb.debian.org/debian bullseye/main amd64 file amd64 1:5.39-3+deb11u1 [69.2 kB] Get: 10 http://deb.debian.org/debian bullseye/main amd64 gettext-base amd64 0.21-4 [175 kB] Get: 11 http://deb.debian.org/debian bullseye/main amd64 libsigsegv2 amd64 2.13-1 [34.8 kB] Get: 12 http://deb.debian.org/debian bullseye/main amd64 m4 amd64 1.4.18-5 [204 kB] Get: 13 http://deb.debian.org/debian bullseye/main amd64 autoconf all 2.69-14 [313 kB] Get: 14 http://deb.debian.org/debian bullseye/main amd64 autotools-dev all 20180224.1+nmu1 [77.1 kB] Get: 15 http://deb.debian.org/debian bullseye/main amd64 automake all 1:1.16.3-2 [814 kB] Get: 16 http://deb.debian.org/debian bullseye/main amd64 autopoint all 0.21-4 [510 kB] Get: 17 http://deb.debian.org/debian bullseye/main amd64 libdebhelper-perl all 13.3.4 [189 kB] Get: 18 http://deb.debian.org/debian bullseye/main amd64 libtool all 2.4.6-15 [513 kB] Get: 19 http://deb.debian.org/debian bullseye/main amd64 dh-autoreconf all 20 [17.1 kB] Get: 20 http://deb.debian.org/debian bullseye/main amd64 libarchive-zip-perl all 1.68-1 [104 kB] Get: 21 http://deb.debian.org/debian bullseye/main amd64 libsub-override-perl all 0.09-2 [10.2 kB] Get: 22 http://deb.debian.org/debian bullseye/main amd64 libfile-stripnondeterminism-perl all 1.12.0-1 [26.3 kB] Get: 23 http://deb.debian.org/debian bullseye/main amd64 dh-strip-nondeterminism all 1.12.0-1 [15.4 kB] Get: 24 http://deb.debian.org/debian bullseye/main amd64 libelf1 amd64 0.183-1 [165 kB] Get: 25 http://deb.debian.org/debian bullseye/main amd64 dwz amd64 0.13+20210201-1 [175 kB] Get: 26 http://deb.debian.org/debian bullseye/main amd64 libicu67 amd64 67.1-7 [8622 kB] Get: 27 http://deb.debian.org/debian bullseye/main amd64 libxml2 amd64 2.9.10+dfsg-6.7+deb11u4 [693 kB] Get: 28 http://deb.debian.org/debian bullseye/main amd64 gettext amd64 0.21-4 [1311 kB] Get: 29 http://deb.debian.org/debian bullseye/main amd64 intltool-debian all 0.35.0+20060710.5 [26.8 kB] Get: 30 http://deb.debian.org/debian bullseye/main amd64 po-debconf all 1.0.21+nmu1 [248 kB] Get: 31 http://deb.debian.org/debian bullseye/main amd64 debhelper all 13.3.4 [1049 kB] Get: 32 http://deb.debian.org/debian bullseye/main amd64 googletest all 1.10.0.20201025-1.1 [629 kB] Get: 33 http://deb.debian.org/debian bullseye/main amd64 libbz2-dev amd64 1.0.8-4 [30.1 kB] Get: 34 http://deb.debian.org/debian bullseye/main amd64 libgtest-dev amd64 1.10.0.20201025-1.1 [226 kB] Get: 35 http://deb.debian.org/debian bullseye/main amd64 markdown all 1.0.1-10.1 [17.5 kB] Get: 36 http://deb.debian.org/debian bullseye/main amd64 zlib1g-dev amd64 1:1.2.11.dfsg-2+deb11u2 [191 kB] Fetched 19.4 MB in 1s (37.4 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package bsdextrautils. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19711 files and directories currently installed.) Preparing to unpack .../00-bsdextrautils_2.36.1-8+deb11u2_amd64.deb ... Unpacking bsdextrautils (2.36.1-8+deb11u2) ... Selecting previously unselected package libuchardet0:amd64. Preparing to unpack .../01-libuchardet0_0.0.7-1_amd64.deb ... Unpacking libuchardet0:amd64 (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../02-groff-base_1.22.4-6_amd64.deb ... Unpacking groff-base (1.22.4-6) ... Selecting previously unselected package libpipeline1:amd64. Preparing to unpack .../03-libpipeline1_1.5.3-1_amd64.deb ... Unpacking libpipeline1:amd64 (1.5.3-1) ... Selecting previously unselected package man-db. Preparing to unpack .../04-man-db_2.9.4-2_amd64.deb ... Unpacking man-db (2.9.4-2) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../05-sensible-utils_0.0.14_all.deb ... Unpacking sensible-utils (0.0.14) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../06-libmagic-mgc_1%3a5.39-3+deb11u1_amd64.deb ... Unpacking libmagic-mgc (1:5.39-3+deb11u1) ... Selecting previously unselected package libmagic1:amd64. Preparing to unpack .../07-libmagic1_1%3a5.39-3+deb11u1_amd64.deb ... Unpacking libmagic1:amd64 (1:5.39-3+deb11u1) ... Selecting previously unselected package file. Preparing to unpack .../08-file_1%3a5.39-3+deb11u1_amd64.deb ... Unpacking file (1:5.39-3+deb11u1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../09-gettext-base_0.21-4_amd64.deb ... Unpacking gettext-base (0.21-4) ... Selecting previously unselected package libsigsegv2:amd64. Preparing to unpack .../10-libsigsegv2_2.13-1_amd64.deb ... Unpacking libsigsegv2:amd64 (2.13-1) ... Selecting previously unselected package m4. Preparing to unpack .../11-m4_1.4.18-5_amd64.deb ... Unpacking m4 (1.4.18-5) ... Selecting previously unselected package autoconf. Preparing to unpack .../12-autoconf_2.69-14_all.deb ... Unpacking autoconf (2.69-14) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../13-autotools-dev_20180224.1+nmu1_all.deb ... Unpacking autotools-dev (20180224.1+nmu1) ... Selecting previously unselected package automake. Preparing to unpack .../14-automake_1%3a1.16.3-2_all.deb ... Unpacking automake (1:1.16.3-2) ... 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Setting up automake (1:1.16.3-2) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up po-debconf (1.0.21+nmu1) ... Setting up man-db (2.9.4-2) ... Not building database; man-db/auto-update is not 'true'. Setting up dh-autoreconf (20) ... Setting up debhelper (13.3.4) ... Processing triggers for libc-bin (2.31-13+deb11u10) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps Reading package lists... Building dependency tree... Reading state information... fakeroot is already the newest version (1.25.3-1.1). 0 upgraded, 0 newly installed, 0 to remove and 0 not upgraded. I: Building the package I: Running cd /build/reproducible-path/adapterremoval-2.3.1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../adapterremoval_2.3.1-3_source.changes dpkg-buildpackage: info: source package adapterremoval dpkg-buildpackage: info: source version 2.3.1-3 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 fakeroot debian/rules clean dh clean dh_auto_clean make -j20 clean make[1]: Entering directory '/build/reproducible-path/adapterremoval-2.3.1' Building AdapterRemoval with coverage instrumentation: no Building AdapterRemoval with debug information: no Cleaning tests ... Cleaning documentation ... Cleaning ... make[1]: Leaving directory '/build/reproducible-path/adapterremoval-2.3.1' dh_clean debian/rules build dh build dh_update_autotools_config dh_autoreconf dh_auto_configure debian/rules override_dh_auto_build make[1]: Entering directory '/build/reproducible-path/adapterremoval-2.3.1' dh_auto_build make -j20 "INSTALL=install --strip-program=true" make[2]: Entering directory '/build/reproducible-path/adapterremoval-2.3.1' Building AdapterRemoval with coverage instrumentation: no Building AdapterRemoval with debug information: no Building build/main/adapterset.o from src/adapterset.cpp Building build/main/alignment.o from src/alignment.cpp Building build/main/alignment_tables.o from src/alignment_tables.cpp Building build/main/argparse.o from src/argparse.cpp Building build/main/barcode_table.o from src/barcode_table.cpp Building build/main/debug.o from src/debug.cpp Building build/main/demultiplex.o from src/demultiplex.cpp Building build/main/fastq.o from src/fastq.cpp Building build/main/fastq_enc.o from src/fastq_enc.cpp Building build/main/fastq_io.o from src/fastq_io.cpp Building build/main/linereader.o from src/linereader.cpp Building build/main/linereader_joined.o from src/linereader_joined.cpp Building build/main/main_adapter_id.o from src/main_adapter_id.cpp Building build/main/main_adapter_rm.o from src/main_adapter_rm.cpp Building build/main/main_demultiplex.o from src/main_demultiplex.cpp Building build/main/managed_writer.o from src/managed_writer.cpp Building build/main/scheduler.o from src/scheduler.cpp Building build/main/strutils.o from src/strutils.cpp Building build/main/threads.o from src/threads.cpp Building build/main/timer.o from src/timer.cpp Building build/main/trimmed_reads.o from src/trimmed_reads.cpp Building build/main/userconfig.o from src/userconfig.cpp Building build/main/main.o from src/main.cpp Linking executable build/AdapterRemoval make[2]: Leaving directory '/build/reproducible-path/adapterremoval-2.3.1' markdown README.md > README.html make[1]: Leaving directory '/build/reproducible-path/adapterremoval-2.3.1' debian/rules override_dh_auto_test make[1]: Entering directory '/build/reproducible-path/adapterremoval-2.3.1' # dh_auto_test make test make[2]: Entering directory '/build/reproducible-path/adapterremoval-2.3.1' Building AdapterRemoval with coverage instrumentation: no Building AdapterRemoval with debug information: no Building build/tests/main_test.o from tests/unit/main_test.cpp Building build/tests/debug.o from src/debug.cpp Building build/tests/alignment.o from src/alignment.cpp Building build/tests/alignment_tables.o from src/alignment_tables.cpp Building build/tests/alignment_test.o from tests/unit/alignment_test.cpp Building build/tests/argparse.o from src/argparse.cpp Building build/tests/argparse_test.o from tests/unit/argparse_test.cpp Building build/tests/barcodes_test.o from tests/unit/barcodes_test.cpp Building build/tests/barcode_table.o from src/barcode_table.cpp Building build/tests/fastq.o from src/fastq.cpp Building build/tests/fastq_test.o from tests/unit/fastq_test.cpp Building build/tests/fastq_enc.o from src/fastq_enc.cpp Building build/tests/fastq_enc_test.o from tests/unit/fastq_enc_test.cpp Building build/tests/strutils.o from src/strutils.cpp Building build/tests/strutils_test.o from tests/unit/strutils_test.cpp Linking executable build/tests/main Running unit tests =============================================================================== All tests passed (807 assertions in 258 test cases) make[2]: Leaving directory '/build/reproducible-path/adapterremoval-2.3.1' make clean_tests make[2]: Entering directory '/build/reproducible-path/adapterremoval-2.3.1' Building AdapterRemoval with coverage instrumentation: no Building AdapterRemoval with debug information: no Cleaning tests ... removed 'build/tests/alignment_test.o' removed 'build/tests/alignment.o' removed 'build/tests/alignment_tables.o' removed 'build/tests/barcode_table.o' removed 'build/tests/fastq.deps' removed 'build/tests/strutils.o' removed 'build/tests/strutils.deps' removed 'build/tests/fastq_enc_test.deps' removed 'build/tests/fastq_test.o' removed 'build/tests/fastq_enc.o' removed 'build/tests/strutils_test.deps' removed 'build/tests/debug.deps' removed 'build/tests/fastq_enc.deps' removed 'build/tests/strutils_test.o' removed 'build/tests/argparse.o' removed 'build/tests/alignment_tables.deps' removed 'build/tests/fastq_test.deps' removed 'build/tests/main_test.o' removed 'build/tests/alignment.deps' removed 'build/tests/argparse_test.o' removed 'build/tests/fastq.o' removed 'build/tests/fastq_enc_test.o' removed 'build/tests/main_test.deps' removed 'build/tests/alignment_test.deps' removed 'build/tests/main' removed 'build/tests/argparse_test.deps' removed 'build/tests/barcodes_test.deps' removed 'build/tests/debug.o' removed 'build/tests/argparse.deps' removed 'build/tests/barcode_table.deps' removed 'build/tests/barcodes_test.o' removed directory 'build/tests' make[2]: Leaving directory '/build/reproducible-path/adapterremoval-2.3.1' make[1]: Leaving directory '/build/reproducible-path/adapterremoval-2.3.1' create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary dh binary dh_testroot dh_prep debian/rules override_dh_auto_install make[1]: Entering directory '/build/reproducible-path/adapterremoval-2.3.1' make PREFIX=/build/reproducible-path/adapterremoval-2.3.1/debian/adapterremoval/usr make[2]: Entering directory '/build/reproducible-path/adapterremoval-2.3.1' Building AdapterRemoval with coverage instrumentation: no Building AdapterRemoval with debug information: no make[2]: Nothing to be done for 'all'. make[2]: Leaving directory '/build/reproducible-path/adapterremoval-2.3.1' # Hmmm, this does nothing ... make[1]: Leaving directory '/build/reproducible-path/adapterremoval-2.3.1' dh_install dh_installdocs debian/rules override_dh_installchangelogs make[1]: Entering directory '/build/reproducible-path/adapterremoval-2.3.1' dh_installchangelogs CHANGES.md make[1]: Leaving directory '/build/reproducible-path/adapterremoval-2.3.1' dh_installman dh_perl dh_link dh_strip_nondeterminism dh_compress debian/rules override_dh_fixperms make[1]: Entering directory '/build/reproducible-path/adapterremoval-2.3.1' dh_fixperms find debian -name benchmark.sh -exec chmod +x \{\} \; make[1]: Leaving directory '/build/reproducible-path/adapterremoval-2.3.1' dh_missing dh_dwz dh_strip dh_makeshlibs dh_shlibdeps dh_installdeb dh_gencontrol dh_md5sums dh_builddeb dpkg-deb: building package 'adapterremoval' in '../adapterremoval_2.3.1-3_amd64.deb'. dpkg-deb: building package 'adapterremoval-examples' in '../adapterremoval-examples_2.3.1-3_all.deb'. dpkg-deb: building package 'adapterremoval-dbgsym' in '../adapterremoval-dbgsym_2.3.1-3_amd64.deb'. dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary >../adapterremoval_2.3.1-3_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/3592110 and its subdirectories I: Current time: Wed Jul 31 23:58:23 -12 2024 I: pbuilder-time-stamp: 1722513503 Thu Aug 1 11:58:25 UTC 2024 I: 1st build successful. Starting 2nd build on remote node ionos5-amd64.debian.net. Thu Aug 1 11:58:25 UTC 2024 I: Preparing to do remote build '2' on ionos5-amd64.debian.net. Thu Aug 1 12:00:47 UTC 2024 I: Deleting $TMPDIR on ionos5-amd64.debian.net. Thu Aug 1 12:00:48 UTC 2024 I: adapterremoval_2.3.1-3_amd64.changes: Format: 1.8 Date: Fri, 10 Jan 2020 15:43:41 +0100 Source: adapterremoval Binary: adapterremoval adapterremoval-dbgsym adapterremoval-examples Architecture: amd64 all Version: 2.3.1-3 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: adapterremoval - rapid adapter trimming, identification, and read merging of gene adapterremoval-examples - rapid adapter trimming, identification, and read merging (example Closes: 923772 Changes: adapterremoval (2.3.1-3) unstable; urgency=medium . * Fix build on some architectures Closes: #923772 * Set upstream metadata fields: Bug-Submit. Checksums-Sha1: 5ac219b01905409cc47558eaf16f88e0d6f81e3c 2848824 adapterremoval-dbgsym_2.3.1-3_amd64.deb 170f5751f065611bafd8ce47fbc2184272e19c1d 379600 adapterremoval-examples_2.3.1-3_all.deb 255b6c93a1107d58bb6d28e993d37059867bd780 5823 adapterremoval_2.3.1-3_amd64.buildinfo e92cc793cf88a07f6e31aeb7a450af4e1a3234de 195372 adapterremoval_2.3.1-3_amd64.deb Checksums-Sha256: bd31ca1c1c8068955255c4fd5fc06e49d4e90330dcd54a0cc337cb0b1192ab52 2848824 adapterremoval-dbgsym_2.3.1-3_amd64.deb b45200dca2be663a5fd81146a70aa01f9f2f6e62f2251b292e21f55531ff1de4 379600 adapterremoval-examples_2.3.1-3_all.deb e4f5639c9a0aa798cb72048cba84814586f6570c6ceaf714402116c7dd96c463 5823 adapterremoval_2.3.1-3_amd64.buildinfo 7cfc961552fe24ba6a369be0a902ae9f872ffcb0f9a5fd4f0c575ccbaa087e02 195372 adapterremoval_2.3.1-3_amd64.deb Files: bafe37c50f5ec7ac6baabd1e68334786 2848824 debug optional adapterremoval-dbgsym_2.3.1-3_amd64.deb be663a39e6a468994136898015a79cb5 379600 science optional adapterremoval-examples_2.3.1-3_all.deb 2618a3b69f1bc1ff30f6120fa48926bc 5823 science optional adapterremoval_2.3.1-3_amd64.buildinfo 9299765bdde4027531a13b4d7c338d79 195372 science optional adapterremoval_2.3.1-3_amd64.deb Thu Aug 1 12:00:49 UTC 2024 I: diffoscope 272 will be used to compare the two builds: Running as unit: rb-diffoscope-amd64_9-12975.service # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.hcM5ykA4/adapterremoval_2.3.1-3.diffoscope.html --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.hcM5ykA4/b1/adapterremoval_2.3.1-3_amd64.changes /srv/reproducible-results/rbuild-debian/r-b-build.hcM5ykA4/b2/adapterremoval_2.3.1-3_amd64.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.399s) 0.399s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.065s) 0.065s 12 calls diffoscope.comparators.binary.FilesystemFile ## specialize (total time: 0.000s) 0.000s 1 call specialize Finished with result: success Main processes terminated with: code=exited/status=0 Service runtime: 726ms CPU time consumed: 727ms Thu Aug 1 12:00:50 UTC 2024 I: diffoscope 272 found no differences in the changes files, and a .buildinfo file also exists. Thu Aug 1 12:00:50 UTC 2024 I: adapterremoval from bullseye built successfully and reproducibly on amd64. Thu Aug 1 12:00:51 UTC 2024 I: Submitting .buildinfo files to external archives: Thu Aug 1 12:00:51 UTC 2024 I: Submitting 8.0K b1/adapterremoval_2.3.1-3_amd64.buildinfo.asc Thu Aug 1 12:00:52 UTC 2024 I: Submitting 8.0K b2/adapterremoval_2.3.1-3_amd64.buildinfo.asc Thu Aug 1 12:00:53 UTC 2024 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Thu Aug 1 12:00:53 UTC 2024 I: Done submitting .buildinfo files. Thu Aug 1 12:00:53 UTC 2024 I: Removing signed adapterremoval_2.3.1-3_amd64.buildinfo.asc files: removed './b1/adapterremoval_2.3.1-3_amd64.buildinfo.asc' removed './b2/adapterremoval_2.3.1-3_amd64.buildinfo.asc'