Fri May 5 19:18:06 UTC 2023 I: starting to build optimir/bookworm/i386 on jenkins on '2023-05-05 19:17' Fri May 5 19:18:06 UTC 2023 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/i386_1/2166/console.log Fri May 5 19:18:06 UTC 2023 I: Downloading source for bookworm/optimir=1.2-1 --2023-05-05 19:18:06-- http://cdn-fastly.deb.debian.org/debian/pool/main/o/optimir/optimir_1.2-1.dsc Connecting to 78.137.99.97:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 1984 (1.9K) [text/prs.lines.tag] Saving to: ‘optimir_1.2-1.dsc’ 0K . 100% 93.9M=0s 2023-05-05 19:18:06 (93.9 MB/s) - ‘optimir_1.2-1.dsc’ saved [1984/1984] Fri May 5 19:18:06 UTC 2023 I: optimir_1.2-1.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: optimir Binary: optimir Architecture: all Version: 1.2-1 Maintainer: Debian Med Packaging Team Uploaders: Dylan Aïssi Homepage: https://github.com/FlorianThibord/OptimiR Standards-Version: 4.6.0 Vcs-Browser: https://salsa.debian.org/med-team/optimir Vcs-Git: https://salsa.debian.org/med-team/optimir.git Testsuite: autopkgtest Build-Depends: debhelper-compat (= 13), dh-python, python3, python3-setuptools Package-List: optimir deb science optional arch=all Checksums-Sha1: f5b0b31d4572ef7ae13df5720e4717251a7f7f16 1748155 optimir_1.2.orig.tar.gz fa713b693d170f487d25925182ad55d9d22f51b4 3476 optimir_1.2-1.debian.tar.xz Checksums-Sha256: de67c81c03ed3cb9faaba93388867faa8de57dfcada06544e6e762785545cb9b 1748155 optimir_1.2.orig.tar.gz 3bbcceb66d45a9f72d504791f4c162d6033ea48a9ded5a0acf40dfbac4af8340 3476 optimir_1.2-1.debian.tar.xz Files: 617473e1a1e467b85451c57c1875a86a 1748155 optimir_1.2.orig.tar.gz ae99593396619c23b7f71334d74b0765 3476 optimir_1.2-1.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJGBAEBCgAwFiEEmjwHvQbeL0FugTpdYS7xYT4FD1QFAmI0nSoSHGRhaXNzaUBk ZWJpYW4ub3JnAAoJEGEu8WE+BQ9UapwP/2cFN5Iq+LJ7nX0BWz8F6FfqvXSVZ31G PiF6bQ5Q98cvbi1UQgEa1N0HenWCC09HjM5+MVln4kgcgoKF17yDqaHrmPFe7ic5 Trhny37b4039f3yBaHnYzvviq2XKmUnyg/b0vAp9uz0prK8TnBZhe8j5ftbgox4r zLzpBJ2oriq0e5U6eAn2Gfuh4Qw+kxCa2St+SGiDhtpQ161aUc3hdueh/gio0qIm 45Yq9JTRQesF0/4k3XcFSB5PhZFqn9sEnfkDF1b/4hVrtf3NyfYJcxtp7LI+IJM7 5QRSLOmdEOFfTVvlXCYkoPi6ePlVPfeaq6ZPSpjKtv10AKlif9eckmbxH0wgGImo 3prd+K/A7nR4l0akWBuvgxuFupIE4a19N3citPssKwVQxxTmm8jOKNU2Z2uZKuUU ziGDdPeIrGquYT1rKnVUY9X4z73O/OE2HmX7783H/lzkq8IBwjE/D0dSpZIrvYFI mgLun0ce81dOvkbKDtc4JdPJswl+THgIp+7miVxOs66byrUEVApPoDaUqw8dRImD Sw1pOIx8aItTTpcuebIXF7yvwMqAYeF7/xWd/RtRLx6k4XFl08imckPIz3kFR/HZ yANF1sAtOeviIpBB8MMoufD/vEhJKmVEjvSjAryejGZXgc9xBNy5D0Qk9htnpMXQ DCEa2qTyRVEj =T9wn -----END PGP SIGNATURE----- Fri May 5 19:18:06 UTC 2023 I: Checking whether the package is not for us Fri May 5 19:18:06 UTC 2023 I: Starting 1st build on remote node ionos2-i386.debian.net. Fri May 5 19:18:06 UTC 2023 I: Preparing to do remote build '1' on ionos2-i386.debian.net. Fri May 5 19:19:13 UTC 2023 I: Deleting $TMPDIR on ionos2-i386.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Fri May 5 07:18:08 -12 2023 I: pbuilder-time-stamp: 1683314288 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bookworm-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: using eatmydata during job I: Copying source file I: copying [optimir_1.2-1.dsc] I: copying [./optimir_1.2.orig.tar.gz] I: copying [./optimir_1.2-1.debian.tar.xz] I: Extracting source gpgv: Signature made Fri Mar 18 02:54:34 2022 -12 gpgv: using RSA key 9A3C07BD06DE2F416E813A5D612EF1613E050F54 gpgv: issuer "daissi@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./optimir_1.2-1.dsc: no acceptable signature found dpkg-source: info: extracting optimir in optimir-1.2 dpkg-source: info: unpacking optimir_1.2.orig.tar.gz dpkg-source: info: unpacking optimir_1.2-1.debian.tar.xz I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/3895/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='i386' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=8' DISTRIBUTION='bookworm' HOME='/root' HOST_ARCH='i386' IFS=' ' INVOCATION_ID='0f2a0ccd8f4e4aa6820b9ce17951459b' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' LD_LIBRARY_PATH='/usr/lib/libeatmydata' LD_PRELOAD='libeatmydata.so' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='3895' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.meXzaQVs/pbuilderrc_ghMv --distribution bookworm --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.meXzaQVs/b1 --logfile b1/build.log optimir_1.2-1.dsc' SUDO_GID='112' SUDO_UID='107' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://78.137.99.97:3128' I: uname -a Linux ionos2-i386 5.10.0-22-686-pae #1 SMP Debian 5.10.178-3 (2023-04-22) i686 GNU/Linux I: ls -l /bin total 6036 -rwxr-xr-x 1 root root 1408088 Apr 23 09:24 bash -rwxr-xr-x 3 root root 38404 Sep 18 2022 bunzip2 -rwxr-xr-x 3 root root 38404 Sep 18 2022 bzcat lrwxrwxrwx 1 root root 6 Sep 18 2022 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2225 Sep 18 2022 bzdiff lrwxrwxrwx 1 root root 6 Sep 18 2022 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4893 Nov 27 2021 bzexe lrwxrwxrwx 1 root root 6 Sep 18 2022 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3775 Sep 18 2022 bzgrep -rwxr-xr-x 3 root root 38404 Sep 18 2022 bzip2 -rwxr-xr-x 1 root root 17892 Sep 18 2022 bzip2recover lrwxrwxrwx 1 root root 6 Sep 18 2022 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Sep 18 2022 bzmore -rwxr-xr-x 1 root root 42920 Sep 20 2022 cat -rwxr-xr-x 1 root root 79816 Sep 20 2022 chgrp -rwxr-xr-x 1 root root 67496 Sep 20 2022 chmod -rwxr-xr-x 1 root root 79816 Sep 20 2022 chown -rwxr-xr-x 1 root root 162024 Sep 20 2022 cp -rwxr-xr-x 1 root root 136916 Jan 5 01:20 dash -rwxr-xr-x 1 root root 137160 Sep 20 2022 date -rwxr-xr-x 1 root root 100364 Sep 20 2022 dd -rwxr-xr-x 1 root root 108940 Sep 20 2022 df -rwxr-xr-x 1 root root 162152 Sep 20 2022 dir -rwxr-xr-x 1 root root 87760 Mar 22 22:20 dmesg lrwxrwxrwx 1 root root 8 Dec 19 01:33 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Dec 19 01:33 domainname -> hostname -rwxr-xr-x 1 root root 38760 Sep 20 2022 echo -rwxr-xr-x 1 root root 41 Jan 24 02:43 egrep -rwxr-xr-x 1 root root 34664 Sep 20 2022 false -rwxr-xr-x 1 root root 41 Jan 24 02:43 fgrep -rwxr-xr-x 1 root root 84272 Mar 22 22:20 findmnt -rwsr-xr-x 1 root root 30240 Mar 22 20:38 fusermount -rwxr-xr-x 1 root root 218680 Jan 24 02:43 grep -rwxr-xr-x 2 root root 2346 Apr 9 2022 gunzip -rwxr-xr-x 1 root root 6447 Apr 9 2022 gzexe -rwxr-xr-x 1 root root 100952 Apr 9 2022 gzip -rwxr-xr-x 1 root root 21916 Dec 19 01:33 hostname -rwxr-xr-x 1 root root 75756 Sep 20 2022 ln -rwxr-xr-x 1 root root 55600 Mar 22 23:43 login -rwxr-xr-x 1 root root 162152 Sep 20 2022 ls -rwxr-xr-x 1 root root 214568 Mar 22 22:20 lsblk -rwxr-xr-x 1 root root 96328 Sep 20 2022 mkdir -rwxr-xr-x 1 root root 84008 Sep 20 2022 mknod -rwxr-xr-x 1 root root 38792 Sep 20 2022 mktemp -rwxr-xr-x 1 root root 63016 Mar 22 22:20 more -rwsr-xr-x 1 root root 58912 Mar 22 22:20 mount -rwxr-xr-x 1 root root 13856 Mar 22 22:20 mountpoint -rwxr-xr-x 1 root root 157932 Sep 20 2022 mv lrwxrwxrwx 1 root root 8 Dec 19 01:33 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Apr 2 18:25 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 38792 Sep 20 2022 pwd lrwxrwxrwx 1 root root 4 Apr 23 09:24 rbash -> bash -rwxr-xr-x 1 root root 51080 Sep 20 2022 readlink -rwxr-xr-x 1 root root 75720 Sep 20 2022 rm -rwxr-xr-x 1 root root 51080 Sep 20 2022 rmdir -rwxr-xr-x 1 root root 22308 Nov 2 2022 run-parts -rwxr-xr-x 1 root root 133224 Jan 5 07:55 sed lrwxrwxrwx 1 root root 4 Jan 5 01:20 sh -> dash -rwxr-xr-x 1 root root 38760 Sep 20 2022 sleep -rwxr-xr-x 1 root root 87976 Sep 20 2022 stty -rwsr-xr-x 1 root root 83492 Mar 22 22:20 su -rwxr-xr-x 1 root root 38792 Sep 20 2022 sync -rwxr-xr-x 1 root root 598456 Apr 6 02:25 tar -rwxr-xr-x 1 root root 13860 Nov 2 2022 tempfile -rwxr-xr-x 1 root root 120776 Sep 20 2022 touch -rwxr-xr-x 1 root root 34664 Sep 20 2022 true -rwxr-xr-x 1 root root 17892 Mar 22 20:38 ulockmgr_server -rwsr-xr-x 1 root root 30236 Mar 22 22:20 umount -rwxr-xr-x 1 root root 38760 Sep 20 2022 uname -rwxr-xr-x 2 root root 2346 Apr 9 2022 uncompress -rwxr-xr-x 1 root root 162152 Sep 20 2022 vdir -rwxr-xr-x 1 root root 71216 Mar 22 22:20 wdctl lrwxrwxrwx 1 root root 8 Dec 19 01:33 ypdomainname -> hostname -rwxr-xr-x 1 root root 1984 Apr 9 2022 zcat -rwxr-xr-x 1 root root 1678 Apr 9 2022 zcmp -rwxr-xr-x 1 root root 6460 Apr 9 2022 zdiff -rwxr-xr-x 1 root root 29 Apr 9 2022 zegrep -rwxr-xr-x 1 root root 29 Apr 9 2022 zfgrep -rwxr-xr-x 1 root root 2081 Apr 9 2022 zforce -rwxr-xr-x 1 root root 8103 Apr 9 2022 zgrep -rwxr-xr-x 1 root root 2206 Apr 9 2022 zless -rwxr-xr-x 1 root root 1842 Apr 9 2022 zmore -rwxr-xr-x 1 root root 4577 Apr 9 2022 znew I: user script /srv/workspace/pbuilder/3895/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: i386 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-python, python3, python3-setuptools dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19604 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-python; however: Package dh-python is not installed. pbuilder-satisfydepends-dummy depends on python3; however: Package python3 is not installed. pbuilder-satisfydepends-dummy depends on python3-setuptools; however: Package python3-setuptools is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libdebhelper-perl{a} libelf1{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libicu72{a} libmagic-mgc{a} libmagic1{a} libpipeline1{a} libpython3-stdlib{a} libpython3.11-minimal{a} libpython3.11-stdlib{a} libreadline8{a} libsub-override-perl{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} media-types{a} po-debconf{a} python3{a} python3-distutils{a} python3-lib2to3{a} python3-minimal{a} python3-pkg-resources{a} python3-setuptools{a} python3.11{a} python3.11-minimal{a} readline-common{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl libarchive-cpio-perl libltdl-dev libmail-sendmail-perl lynx wget 0 packages upgraded, 46 newly installed, 0 to remove and 0 not upgraded. Need to get 25.9 MB of archives. After unpacking 100 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian bookworm/main i386 libpython3.11-minimal i386 3.11.2-6 [813 kB] Get: 2 http://deb.debian.org/debian bookworm/main i386 libexpat1 i386 2.5.0-1 [103 kB] Get: 3 http://deb.debian.org/debian bookworm/main i386 python3.11-minimal i386 3.11.2-6 [2130 kB] Get: 4 http://deb.debian.org/debian bookworm/main i386 python3-minimal i386 3.11.2-1+b1 [26.3 kB] Get: 5 http://deb.debian.org/debian bookworm/main i386 media-types all 10.0.0 [26.1 kB] Get: 6 http://deb.debian.org/debian bookworm/main i386 readline-common all 8.2-1.3 [69.0 kB] Get: 7 http://deb.debian.org/debian bookworm/main i386 libreadline8 i386 8.2-1.3 [171 kB] Get: 8 http://deb.debian.org/debian bookworm/main i386 libpython3.11-stdlib i386 3.11.2-6 [1799 kB] Get: 9 http://deb.debian.org/debian bookworm/main i386 python3.11 i386 3.11.2-6 [572 kB] Get: 10 http://deb.debian.org/debian bookworm/main i386 libpython3-stdlib i386 3.11.2-1+b1 [9308 B] Get: 11 http://deb.debian.org/debian bookworm/main i386 python3 i386 3.11.2-1+b1 [26.3 kB] Get: 12 http://deb.debian.org/debian bookworm/main i386 sensible-utils all 0.0.17+nmu1 [19.0 kB] Get: 13 http://deb.debian.org/debian bookworm/main i386 libmagic-mgc i386 1:5.44-3 [305 kB] Get: 14 http://deb.debian.org/debian bookworm/main i386 libmagic1 i386 1:5.44-3 [114 kB] Get: 15 http://deb.debian.org/debian bookworm/main i386 file i386 1:5.44-3 [42.5 kB] Get: 16 http://deb.debian.org/debian bookworm/main i386 gettext-base i386 0.21-12 [162 kB] Get: 17 http://deb.debian.org/debian bookworm/main i386 libuchardet0 i386 0.0.7-1 [67.9 kB] Get: 18 http://deb.debian.org/debian bookworm/main i386 groff-base i386 1.22.4-10 [932 kB] Get: 19 http://deb.debian.org/debian bookworm/main i386 bsdextrautils i386 2.38.1-5+b1 [90.3 kB] Get: 20 http://deb.debian.org/debian bookworm/main i386 libpipeline1 i386 1.5.7-1 [40.0 kB] Get: 21 http://deb.debian.org/debian bookworm/main i386 man-db i386 2.11.2-2 [1397 kB] Get: 22 http://deb.debian.org/debian bookworm/main i386 m4 i386 1.4.19-3 [294 kB] Get: 23 http://deb.debian.org/debian bookworm/main i386 autoconf all 2.71-3 [332 kB] Get: 24 http://deb.debian.org/debian bookworm/main i386 autotools-dev all 20220109.1 [51.6 kB] Get: 25 http://deb.debian.org/debian bookworm/main i386 automake all 1:1.16.5-1.3 [823 kB] Get: 26 http://deb.debian.org/debian bookworm/main i386 autopoint all 0.21-12 [495 kB] Get: 27 http://deb.debian.org/debian bookworm/main i386 libdebhelper-perl all 13.11.4 [81.2 kB] Get: 28 http://deb.debian.org/debian bookworm/main i386 libtool all 2.4.7-5 [517 kB] Get: 29 http://deb.debian.org/debian bookworm/main i386 dh-autoreconf all 20 [17.1 kB] Get: 30 http://deb.debian.org/debian bookworm/main i386 libarchive-zip-perl all 1.68-1 [104 kB] Get: 31 http://deb.debian.org/debian bookworm/main i386 libsub-override-perl all 0.09-4 [9304 B] Get: 32 http://deb.debian.org/debian bookworm/main i386 libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get: 33 http://deb.debian.org/debian bookworm/main i386 dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get: 34 http://deb.debian.org/debian bookworm/main i386 libelf1 i386 0.188-2.1 [179 kB] Get: 35 http://deb.debian.org/debian bookworm/main i386 dwz i386 0.15-1 [118 kB] Get: 36 http://deb.debian.org/debian bookworm/main i386 libicu72 i386 72.1-3 [9541 kB] Get: 37 http://deb.debian.org/debian bookworm/main i386 libxml2 i386 2.9.14+dfsg-1.2 [720 kB] Get: 38 http://deb.debian.org/debian bookworm/main i386 gettext i386 0.21-12 [1311 kB] Get: 39 http://deb.debian.org/debian bookworm/main i386 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 40 http://deb.debian.org/debian bookworm/main i386 po-debconf all 1.0.21+nmu1 [248 kB] Get: 41 http://deb.debian.org/debian bookworm/main i386 debhelper all 13.11.4 [942 kB] Get: 42 http://deb.debian.org/debian bookworm/main i386 python3-lib2to3 all 3.11.2-2 [76.2 kB] Get: 43 http://deb.debian.org/debian bookworm/main i386 python3-distutils all 3.11.2-2 [131 kB] Get: 44 http://deb.debian.org/debian bookworm/main i386 dh-python all 5.20230130 [104 kB] Get: 45 http://deb.debian.org/debian bookworm/main i386 python3-pkg-resources all 66.1.1-1 [296 kB] Get: 46 http://deb.debian.org/debian bookworm/main i386 python3-setuptools all 66.1.1-1 [521 kB] Fetched 25.9 MB in 1s (25.7 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libpython3.11-minimal:i386. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19604 files and directories currently installed.) Preparing to unpack .../libpython3.11-minimal_3.11.2-6_i386.deb ... Unpacking libpython3.11-minimal:i386 (3.11.2-6) ... Selecting previously unselected package libexpat1:i386. Preparing to unpack .../libexpat1_2.5.0-1_i386.deb ... Unpacking libexpat1:i386 (2.5.0-1) ... Selecting previously unselected package python3.11-minimal. Preparing to unpack .../python3.11-minimal_3.11.2-6_i386.deb ... Unpacking python3.11-minimal (3.11.2-6) ... Setting up libpython3.11-minimal:i386 (3.11.2-6) ... Setting up libexpat1:i386 (2.5.0-1) ... Setting up python3.11-minimal (3.11.2-6) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19920 files and directories currently installed.) Preparing to unpack .../0-python3-minimal_3.11.2-1+b1_i386.deb ... Unpacking python3-minimal (3.11.2-1+b1) ... Selecting previously unselected package media-types. Preparing to unpack .../1-media-types_10.0.0_all.deb ... Unpacking media-types (10.0.0) ... Selecting previously unselected package readline-common. Preparing to unpack .../2-readline-common_8.2-1.3_all.deb ... Unpacking readline-common (8.2-1.3) ... Selecting previously unselected package libreadline8:i386. Preparing to unpack .../3-libreadline8_8.2-1.3_i386.deb ... Unpacking libreadline8:i386 (8.2-1.3) ... Selecting previously unselected package libpython3.11-stdlib:i386. Preparing to unpack .../4-libpython3.11-stdlib_3.11.2-6_i386.deb ... Unpacking libpython3.11-stdlib:i386 (3.11.2-6) ... Selecting previously unselected package python3.11. Preparing to unpack .../5-python3.11_3.11.2-6_i386.deb ... Unpacking python3.11 (3.11.2-6) ... Selecting previously unselected package libpython3-stdlib:i386. Preparing to unpack .../6-libpython3-stdlib_3.11.2-1+b1_i386.deb ... Unpacking libpython3-stdlib:i386 (3.11.2-1+b1) ... Setting up python3-minimal (3.11.2-1+b1) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20354 files and directories currently installed.) Preparing to unpack .../00-python3_3.11.2-1+b1_i386.deb ... Unpacking python3 (3.11.2-1+b1) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../01-sensible-utils_0.0.17+nmu1_all.deb ... 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Setting up sensible-utils (0.0.17+nmu1) ... Setting up libuchardet0:i386 (0.0.7-1) ... Setting up libsub-override-perl (0.09-4) ... Setting up libelf1:i386 (0.188-2.1) ... Setting up readline-common (8.2-1.3) ... Setting up libxml2:i386 (2.9.14+dfsg-1.2) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.13.1-1) ... Setting up gettext (0.21-12) ... Setting up libtool (2.4.7-5) ... Setting up libreadline8:i386 (8.2-1.3) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... Setting up dh-strip-nondeterminism (1.13.1-1) ... Setting up dwz (0.15-1) ... Setting up groff-base (1.22.4-10) ... Setting up po-debconf (1.0.21+nmu1) ... Setting up libpython3.11-stdlib:i386 (3.11.2-6) ... Setting up man-db (2.11.2-2) ... Not building database; man-db/auto-update is not 'true'. Setting up libpython3-stdlib:i386 (3.11.2-1+b1) ... Setting up python3.11 (3.11.2-6) ... Setting up debhelper (13.11.4) ... Setting up python3 (3.11.2-1+b1) ... Setting up python3-lib2to3 (3.11.2-2) ... Setting up python3-pkg-resources (66.1.1-1) ... Setting up python3-distutils (3.11.2-2) ... Setting up dh-python (5.20230130) ... Setting up python3-setuptools (66.1.1-1) ... Processing triggers for libc-bin (2.36-9) ... Reading package lists... Building dependency tree... Reading state information... Reading extended state information... Initializing package states... Writing extended state information... Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/optimir-1.2/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../optimir_1.2-1_source.changes dpkg-buildpackage: info: source package optimir dpkg-buildpackage: info: source version 1.2-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Dylan Aïssi dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 debian/rules clean dh clean --with python3 --buildsystem=pybuild dh_auto_clean -O--buildsystem=pybuild I: pybuild base:240: python3.11 setup.py clean running clean removing '/build/optimir-1.2/.pybuild/cpython3_3.11_optimir/build' (and everything under it) 'build/bdist.linux-i386' does not exist -- can't clean it 'build/scripts-3.11' does not exist -- can't clean it dh_autoreconf_clean -O--buildsystem=pybuild dh_clean -O--buildsystem=pybuild debian/rules binary dh binary --with python3 --buildsystem=pybuild dh_update_autotools_config -O--buildsystem=pybuild dh_autoreconf -O--buildsystem=pybuild dh_auto_configure -O--buildsystem=pybuild I: pybuild base:240: python3.11 setup.py config running config dh_auto_build -O--buildsystem=pybuild I: pybuild base:240: /usr/bin/python3 setup.py build running build running build_py creating /build/optimir-1.2/.pybuild/cpython3_3.11_optimir/build/optimir copying optimir/command_line.py -> /build/optimir-1.2/.pybuild/cpython3_3.11_optimir/build/optimir copying optimir/__init__.py -> /build/optimir-1.2/.pybuild/cpython3_3.11_optimir/build/optimir creating /build/optimir-1.2/.pybuild/cpython3_3.11_optimir/build/optimir/libs copying optimir/libs/annotate.py -> /build/optimir-1.2/.pybuild/cpython3_3.11_optimir/build/optimir/libs copying optimir/libs/read_collapser.py -> /build/optimir-1.2/.pybuild/cpython3_3.11_optimir/build/optimir/libs copying optimir/libs/filter_reads.py -> /build/optimir-1.2/.pybuild/cpython3_3.11_optimir/build/optimir/libs copying optimir/libs/summarize.py -> /build/optimir-1.2/.pybuild/cpython3_3.11_optimir/build/optimir/libs copying optimir/libs/post_process.py -> /build/optimir-1.2/.pybuild/cpython3_3.11_optimir/build/optimir/libs copying optimir/libs/mapping.py -> /build/optimir-1.2/.pybuild/cpython3_3.11_optimir/build/optimir/libs copying optimir/libs/library_preparation.py -> /build/optimir-1.2/.pybuild/cpython3_3.11_optimir/build/optimir/libs copying optimir/libs/consistency.py -> /build/optimir-1.2/.pybuild/cpython3_3.11_optimir/build/optimir/libs copying optimir/libs/get_counts.py -> /build/optimir-1.2/.pybuild/cpython3_3.11_optimir/build/optimir/libs copying optimir/libs/pre_process.py -> /build/optimir-1.2/.pybuild/cpython3_3.11_optimir/build/optimir/libs copying optimir/libs/process.py -> /build/optimir-1.2/.pybuild/cpython3_3.11_optimir/build/optimir/libs copying optimir/libs/__init__.py -> /build/optimir-1.2/.pybuild/cpython3_3.11_optimir/build/optimir/libs copying optimir/libs/scoring.py -> /build/optimir-1.2/.pybuild/cpython3_3.11_optimir/build/optimir/libs copying optimir/libs/essentials.py -> /build/optimir-1.2/.pybuild/cpython3_3.11_optimir/build/optimir/libs running egg_info creating OptimiR.egg-info writing OptimiR.egg-info/PKG-INFO writing dependency_links to OptimiR.egg-info/dependency_links.txt writing entry points to OptimiR.egg-info/entry_points.txt writing requirements to OptimiR.egg-info/requires.txt writing top-level names to OptimiR.egg-info/top_level.txt writing manifest file 'OptimiR.egg-info/SOURCES.txt' reading manifest file 'OptimiR.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE' writing manifest file 'OptimiR.egg-info/SOURCES.txt' /usr/lib/python3/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'optimir.resources.coordinates' as data is deprecated, please list it in `packages`. !! ############################ # Package would be ignored # ############################ Python recognizes 'optimir.resources.coordinates' as an importable package, but it is not listed in the `packages` configuration of setuptools. 'optimir.resources.coordinates' has been automatically added to the distribution only because it may contain data files, but this behavior is likely to change in future versions of setuptools (and therefore is considered deprecated). Please make sure that 'optimir.resources.coordinates' is included as a package by using the `packages` configuration field or the proper discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" and "data files" on setuptools documentation page. !! check.warn(importable) /usr/lib/python3/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'optimir.resources.fasta' as data is deprecated, please list it in `packages`. !! ############################ # Package would be ignored # ############################ Python recognizes 'optimir.resources.fasta' as an importable package, but it is not listed in the `packages` configuration of setuptools. 'optimir.resources.fasta' has been automatically added to the distribution only because it may contain data files, but this behavior is likely to change in future versions of setuptools (and therefore is considered deprecated). Please make sure that 'optimir.resources.fasta' is included as a package by using the `packages` configuration field or the proper discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" and "data files" on setuptools documentation page. !! check.warn(importable) creating /build/optimir-1.2/.pybuild/cpython3_3.11_optimir/build/optimir/resources creating /build/optimir-1.2/.pybuild/cpython3_3.11_optimir/build/optimir/resources/coordinates copying optimir/resources/coordinates/hsa_miRBase_v21.gff3 -> /build/optimir-1.2/.pybuild/cpython3_3.11_optimir/build/optimir/resources/coordinates copying optimir/resources/coordinates/hsa_miRBase_v22.gff3 -> /build/optimir-1.2/.pybuild/cpython3_3.11_optimir/build/optimir/resources/coordinates copying optimir/resources/coordinates/hsa_miRCarta_v1.1.gff3 -> /build/optimir-1.2/.pybuild/cpython3_3.11_optimir/build/optimir/resources/coordinates copying optimir/resources/coordinates/hsa_miRgeneDB_v2.gff3 -> /build/optimir-1.2/.pybuild/cpython3_3.11_optimir/build/optimir/resources/coordinates creating /build/optimir-1.2/.pybuild/cpython3_3.11_optimir/build/optimir/resources/fasta copying optimir/resources/fasta/hsa_hairpins_miRBase_v21.fa -> /build/optimir-1.2/.pybuild/cpython3_3.11_optimir/build/optimir/resources/fasta copying optimir/resources/fasta/hsa_hairpins_miRBase_v22.fa -> /build/optimir-1.2/.pybuild/cpython3_3.11_optimir/build/optimir/resources/fasta copying optimir/resources/fasta/hsa_hairpins_miRCarta_v1.1.fa -> /build/optimir-1.2/.pybuild/cpython3_3.11_optimir/build/optimir/resources/fasta copying optimir/resources/fasta/hsa_hairpins_miRgeneDB_v2.fa -> /build/optimir-1.2/.pybuild/cpython3_3.11_optimir/build/optimir/resources/fasta copying optimir/resources/fasta/hsa_matures_miRBase_v21.fa -> /build/optimir-1.2/.pybuild/cpython3_3.11_optimir/build/optimir/resources/fasta copying optimir/resources/fasta/hsa_matures_miRBase_v22.fa -> /build/optimir-1.2/.pybuild/cpython3_3.11_optimir/build/optimir/resources/fasta copying optimir/resources/fasta/hsa_matures_miRCarta_v1.1.fa -> /build/optimir-1.2/.pybuild/cpython3_3.11_optimir/build/optimir/resources/fasta copying optimir/resources/fasta/hsa_matures_miRgeneDB_v2.fa -> /build/optimir-1.2/.pybuild/cpython3_3.11_optimir/build/optimir/resources/fasta dh_auto_test -O--buildsystem=pybuild I: pybuild base:240: cd /build/optimir-1.2/.pybuild/cpython3_3.11_optimir/build; python3.11 -m unittest discover -v ---------------------------------------------------------------------- Ran 0 tests in 0.000s OK create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=pybuild dh_prep -O--buildsystem=pybuild dh_auto_install --destdir=debian/optimir/ -O--buildsystem=pybuild I: pybuild base:240: /usr/bin/python3 setup.py install --root /build/optimir-1.2/debian/optimir running install /usr/lib/python3/dist-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. warnings.warn( running build running build_py running egg_info writing OptimiR.egg-info/PKG-INFO writing dependency_links to OptimiR.egg-info/dependency_links.txt writing entry points to OptimiR.egg-info/entry_points.txt writing requirements to OptimiR.egg-info/requires.txt writing top-level names to OptimiR.egg-info/top_level.txt reading manifest file 'OptimiR.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE' writing manifest file 'OptimiR.egg-info/SOURCES.txt' /usr/lib/python3/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'optimir.resources.coordinates' as data is deprecated, please list it in `packages`. !! ############################ # Package would be ignored # ############################ Python recognizes 'optimir.resources.coordinates' as an importable package, but it is not listed in the `packages` configuration of setuptools. 'optimir.resources.coordinates' has been automatically added to the distribution only because it may contain data files, but this behavior is likely to change in future versions of setuptools (and therefore is considered deprecated). Please make sure that 'optimir.resources.coordinates' is included as a package by using the `packages` configuration field or the proper discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" and "data files" on setuptools documentation page. !! check.warn(importable) /usr/lib/python3/dist-packages/setuptools/command/build_py.py:202: SetuptoolsDeprecationWarning: Installing 'optimir.resources.fasta' as data is deprecated, please list it in `packages`. !! ############################ # Package would be ignored # ############################ Python recognizes 'optimir.resources.fasta' as an importable package, but it is not listed in the `packages` configuration of setuptools. 'optimir.resources.fasta' has been automatically added to the distribution only because it may contain data files, but this behavior is likely to change in future versions of setuptools (and therefore is considered deprecated). Please make sure that 'optimir.resources.fasta' is included as a package by using the `packages` configuration field or the proper discovery methods (for example by using `find_namespace_packages(...)`/`find_namespace:` instead of `find_packages(...)`/`find:`). You can read more about "package discovery" and "data files" on setuptools documentation page. !! check.warn(importable) running install_lib creating /build/optimir-1.2/debian/optimir/usr creating /build/optimir-1.2/debian/optimir/usr/lib creating /build/optimir-1.2/debian/optimir/usr/lib/python3.11 creating /build/optimir-1.2/debian/optimir/usr/lib/python3.11/dist-packages creating /build/optimir-1.2/debian/optimir/usr/lib/python3.11/dist-packages/optimir creating /build/optimir-1.2/debian/optimir/usr/lib/python3.11/dist-packages/optimir/resources creating /build/optimir-1.2/debian/optimir/usr/lib/python3.11/dist-packages/optimir/resources/coordinates copying /build/optimir-1.2/.pybuild/cpython3_3.11_optimir/build/optimir/resources/coordinates/hsa_miRBase_v22.gff3 -> /build/optimir-1.2/debian/optimir/usr/lib/python3.11/dist-packages/optimir/resources/coordinates copying /build/optimir-1.2/.pybuild/cpython3_3.11_optimir/build/optimir/resources/coordinates/hsa_miRBase_v21.gff3 -> /build/optimir-1.2/debian/optimir/usr/lib/python3.11/dist-packages/optimir/resources/coordinates copying /build/optimir-1.2/.pybuild/cpython3_3.11_optimir/build/optimir/resources/coordinates/hsa_miRCarta_v1.1.gff3 -> /build/optimir-1.2/debian/optimir/usr/lib/python3.11/dist-packages/optimir/resources/coordinates copying /build/optimir-1.2/.pybuild/cpython3_3.11_optimir/build/optimir/resources/coordinates/hsa_miRgeneDB_v2.gff3 -> /build/optimir-1.2/debian/optimir/usr/lib/python3.11/dist-packages/optimir/resources/coordinates creating /build/optimir-1.2/debian/optimir/usr/lib/python3.11/dist-packages/optimir/resources/fasta copying /build/optimir-1.2/.pybuild/cpython3_3.11_optimir/build/optimir/resources/fasta/hsa_hairpins_miRCarta_v1.1.fa -> /build/optimir-1.2/debian/optimir/usr/lib/python3.11/dist-packages/optimir/resources/fasta copying /build/optimir-1.2/.pybuild/cpython3_3.11_optimir/build/optimir/resources/fasta/hsa_hairpins_miRBase_v22.fa -> /build/optimir-1.2/debian/optimir/usr/lib/python3.11/dist-packages/optimir/resources/fasta copying /build/optimir-1.2/.pybuild/cpython3_3.11_optimir/build/optimir/resources/fasta/hsa_hairpins_miRBase_v21.fa -> /build/optimir-1.2/debian/optimir/usr/lib/python3.11/dist-packages/optimir/resources/fasta copying /build/optimir-1.2/.pybuild/cpython3_3.11_optimir/build/optimir/resources/fasta/hsa_matures_miRgeneDB_v2.fa -> /build/optimir-1.2/debian/optimir/usr/lib/python3.11/dist-packages/optimir/resources/fasta copying /build/optimir-1.2/.pybuild/cpython3_3.11_optimir/build/optimir/resources/fasta/hsa_matures_miRBase_v22.fa -> /build/optimir-1.2/debian/optimir/usr/lib/python3.11/dist-packages/optimir/resources/fasta copying /build/optimir-1.2/.pybuild/cpython3_3.11_optimir/build/optimir/resources/fasta/hsa_hairpins_miRgeneDB_v2.fa -> /build/optimir-1.2/debian/optimir/usr/lib/python3.11/dist-packages/optimir/resources/fasta copying /build/optimir-1.2/.pybuild/cpython3_3.11_optimir/build/optimir/resources/fasta/hsa_matures_miRBase_v21.fa -> /build/optimir-1.2/debian/optimir/usr/lib/python3.11/dist-packages/optimir/resources/fasta copying /build/optimir-1.2/.pybuild/cpython3_3.11_optimir/build/optimir/resources/fasta/hsa_matures_miRCarta_v1.1.fa -> /build/optimir-1.2/debian/optimir/usr/lib/python3.11/dist-packages/optimir/resources/fasta creating /build/optimir-1.2/debian/optimir/usr/lib/python3.11/dist-packages/optimir/__pycache__ copying /build/optimir-1.2/.pybuild/cpython3_3.11_optimir/build/optimir/__pycache__/__init__.cpython-311.pyc -> /build/optimir-1.2/debian/optimir/usr/lib/python3.11/dist-packages/optimir/__pycache__ creating /build/optimir-1.2/debian/optimir/usr/lib/python3.11/dist-packages/optimir/libs copying /build/optimir-1.2/.pybuild/cpython3_3.11_optimir/build/optimir/libs/annotate.py -> /build/optimir-1.2/debian/optimir/usr/lib/python3.11/dist-packages/optimir/libs copying /build/optimir-1.2/.pybuild/cpython3_3.11_optimir/build/optimir/libs/read_collapser.py -> /build/optimir-1.2/debian/optimir/usr/lib/python3.11/dist-packages/optimir/libs creating /build/optimir-1.2/debian/optimir/usr/lib/python3.11/dist-packages/optimir/libs/__pycache__ copying /build/optimir-1.2/.pybuild/cpython3_3.11_optimir/build/optimir/libs/__pycache__/__init__.cpython-311.pyc -> /build/optimir-1.2/debian/optimir/usr/lib/python3.11/dist-packages/optimir/libs/__pycache__ copying /build/optimir-1.2/.pybuild/cpython3_3.11_optimir/build/optimir/libs/filter_reads.py -> /build/optimir-1.2/debian/optimir/usr/lib/python3.11/dist-packages/optimir/libs copying /build/optimir-1.2/.pybuild/cpython3_3.11_optimir/build/optimir/libs/summarize.py -> /build/optimir-1.2/debian/optimir/usr/lib/python3.11/dist-packages/optimir/libs copying /build/optimir-1.2/.pybuild/cpython3_3.11_optimir/build/optimir/libs/post_process.py -> /build/optimir-1.2/debian/optimir/usr/lib/python3.11/dist-packages/optimir/libs copying /build/optimir-1.2/.pybuild/cpython3_3.11_optimir/build/optimir/libs/mapping.py -> /build/optimir-1.2/debian/optimir/usr/lib/python3.11/dist-packages/optimir/libs copying /build/optimir-1.2/.pybuild/cpython3_3.11_optimir/build/optimir/libs/library_preparation.py -> /build/optimir-1.2/debian/optimir/usr/lib/python3.11/dist-packages/optimir/libs copying /build/optimir-1.2/.pybuild/cpython3_3.11_optimir/build/optimir/libs/consistency.py -> /build/optimir-1.2/debian/optimir/usr/lib/python3.11/dist-packages/optimir/libs copying /build/optimir-1.2/.pybuild/cpython3_3.11_optimir/build/optimir/libs/get_counts.py -> /build/optimir-1.2/debian/optimir/usr/lib/python3.11/dist-packages/optimir/libs copying /build/optimir-1.2/.pybuild/cpython3_3.11_optimir/build/optimir/libs/pre_process.py -> /build/optimir-1.2/debian/optimir/usr/lib/python3.11/dist-packages/optimir/libs copying /build/optimir-1.2/.pybuild/cpython3_3.11_optimir/build/optimir/libs/process.py -> /build/optimir-1.2/debian/optimir/usr/lib/python3.11/dist-packages/optimir/libs copying /build/optimir-1.2/.pybuild/cpython3_3.11_optimir/build/optimir/libs/__init__.py -> /build/optimir-1.2/debian/optimir/usr/lib/python3.11/dist-packages/optimir/libs copying /build/optimir-1.2/.pybuild/cpython3_3.11_optimir/build/optimir/libs/scoring.py -> /build/optimir-1.2/debian/optimir/usr/lib/python3.11/dist-packages/optimir/libs copying /build/optimir-1.2/.pybuild/cpython3_3.11_optimir/build/optimir/libs/essentials.py -> /build/optimir-1.2/debian/optimir/usr/lib/python3.11/dist-packages/optimir/libs copying /build/optimir-1.2/.pybuild/cpython3_3.11_optimir/build/optimir/command_line.py -> /build/optimir-1.2/debian/optimir/usr/lib/python3.11/dist-packages/optimir copying /build/optimir-1.2/.pybuild/cpython3_3.11_optimir/build/optimir/__init__.py -> /build/optimir-1.2/debian/optimir/usr/lib/python3.11/dist-packages/optimir byte-compiling /build/optimir-1.2/debian/optimir/usr/lib/python3.11/dist-packages/optimir/libs/annotate.py to annotate.cpython-311.pyc byte-compiling /build/optimir-1.2/debian/optimir/usr/lib/python3.11/dist-packages/optimir/libs/read_collapser.py to read_collapser.cpython-311.pyc byte-compiling /build/optimir-1.2/debian/optimir/usr/lib/python3.11/dist-packages/optimir/libs/filter_reads.py to filter_reads.cpython-311.pyc byte-compiling /build/optimir-1.2/debian/optimir/usr/lib/python3.11/dist-packages/optimir/libs/summarize.py to summarize.cpython-311.pyc byte-compiling /build/optimir-1.2/debian/optimir/usr/lib/python3.11/dist-packages/optimir/libs/post_process.py to post_process.cpython-311.pyc byte-compiling /build/optimir-1.2/debian/optimir/usr/lib/python3.11/dist-packages/optimir/libs/mapping.py to mapping.cpython-311.pyc byte-compiling /build/optimir-1.2/debian/optimir/usr/lib/python3.11/dist-packages/optimir/libs/library_preparation.py to library_preparation.cpython-311.pyc byte-compiling /build/optimir-1.2/debian/optimir/usr/lib/python3.11/dist-packages/optimir/libs/consistency.py to consistency.cpython-311.pyc byte-compiling /build/optimir-1.2/debian/optimir/usr/lib/python3.11/dist-packages/optimir/libs/get_counts.py to get_counts.cpython-311.pyc /usr/lib/python3.11/dist-packages/optimir/libs/get_counts.py:453: SyntaxWarning: "is" with a literal. Did you mean "=="? byte-compiling /build/optimir-1.2/debian/optimir/usr/lib/python3.11/dist-packages/optimir/libs/pre_process.py to pre_process.cpython-311.pyc byte-compiling /build/optimir-1.2/debian/optimir/usr/lib/python3.11/dist-packages/optimir/libs/process.py to process.cpython-311.pyc byte-compiling /build/optimir-1.2/debian/optimir/usr/lib/python3.11/dist-packages/optimir/libs/__init__.py to __init__.cpython-311.pyc byte-compiling /build/optimir-1.2/debian/optimir/usr/lib/python3.11/dist-packages/optimir/libs/scoring.py to scoring.cpython-311.pyc byte-compiling /build/optimir-1.2/debian/optimir/usr/lib/python3.11/dist-packages/optimir/libs/essentials.py to essentials.cpython-311.pyc byte-compiling /build/optimir-1.2/debian/optimir/usr/lib/python3.11/dist-packages/optimir/command_line.py to command_line.cpython-311.pyc byte-compiling /build/optimir-1.2/debian/optimir/usr/lib/python3.11/dist-packages/optimir/__init__.py to __init__.cpython-311.pyc running install_egg_info Copying OptimiR.egg-info to /build/optimir-1.2/debian/optimir/usr/lib/python3.11/dist-packages/OptimiR-1.0.egg-info Skipping SOURCES.txt running install_scripts Installing optimir script to /build/optimir-1.2/debian/optimir/usr/bin dh_installdocs -O--buildsystem=pybuild dh_installchangelogs -O--buildsystem=pybuild dh_installexamples -O--buildsystem=pybuild debian/rules override_dh_installman make[1]: Entering directory '/build/optimir-1.2' dh_installman debian/optimir.1 make[1]: Leaving directory '/build/optimir-1.2' dh_python3 -O--buildsystem=pybuild dh_installsystemduser -O--buildsystem=pybuild dh_perl -O--buildsystem=pybuild dh_link -O--buildsystem=pybuild dh_strip_nondeterminism -O--buildsystem=pybuild dh_compress -O--buildsystem=pybuild dh_fixperms -O--buildsystem=pybuild dh_missing -O--buildsystem=pybuild dh_installdeb -O--buildsystem=pybuild dh_gencontrol -O--buildsystem=pybuild dpkg-gencontrol: warning: Depends field of package optimir: substitution variable ${shlibs:Depends} used, but is not defined dh_md5sums -O--buildsystem=pybuild dh_builddeb -O--buildsystem=pybuild dpkg-deb: building package 'optimir' in '../optimir_1.2-1_all.deb'. dpkg-genbuildinfo --build=binary -O../optimir_1.2-1_i386.buildinfo dpkg-genchanges --build=binary -O../optimir_1.2-1_i386.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/3895 and its subdirectories I: Current time: Fri May 5 07:19:12 -12 2023 I: pbuilder-time-stamp: 1683314352 Fri May 5 19:19:13 UTC 2023 I: 1st build successful. Starting 2nd build on remote node ionos6-i386.debian.net. Fri May 5 19:19:13 UTC 2023 I: Preparing to do remote build '2' on ionos6-i386.debian.net. Fri May 5 19:19:47 UTC 2023 I: Deleting $TMPDIR on ionos6-i386.debian.net. Fri May 5 19:19:47 UTC 2023 I: optimir_1.2-1_i386.changes: Format: 1.8 Date: Fri, 18 Mar 2022 15:43:54 +0100 Source: optimir Binary: optimir Architecture: all Version: 1.2-1 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Dylan Aïssi Description: optimir - Integrating genetic variations in miRNA alignment Changes: optimir (1.2-1) unstable; urgency=medium . * New upstream version * Drop patch applied upstream Checksums-Sha1: 495ebc93bc070085eef0af768b26db4df215de45 1028652 optimir_1.2-1_all.deb e968d53630894535039d0065e9470b06cc56225c 5355 optimir_1.2-1_i386.buildinfo Checksums-Sha256: d163cf5fffcdb155dbad207488c52052f73bbe7a876e90e799378589625d7186 1028652 optimir_1.2-1_all.deb dc57fb0d5abdbb3d7cfa6ebd55afa8cbb87a44fafc8617379f15e43680787a8f 5355 optimir_1.2-1_i386.buildinfo Files: a96b419a9f9afbab53944811c9a71c5e 1028652 science optional optimir_1.2-1_all.deb b25fcd067b9974b81217dfb36b8e28a9 5355 science optional optimir_1.2-1_i386.buildinfo Fri May 5 19:19:49 UTC 2023 I: diffoscope 241 will be used to compare the two builds: # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.meXzaQVs/optimir_1.2-1.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.meXzaQVs/optimir_1.2-1.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.meXzaQVs/optimir_1.2-1.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.meXzaQVs/b1/optimir_1.2-1_i386.changes /srv/reproducible-results/rbuild-debian/r-b-build.meXzaQVs/b2/optimir_1.2-1_i386.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.376s) 0.376s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.030s) 0.030s 12 calls diffoscope.comparators.binary.FilesystemFile 0.000s 10 calls abc.DotChangesFile ## specialize (total time: 0.000s) 0.000s 1 call specialize Fri May 5 19:25:31 UTC 2023 I: diffoscope 241 found no differences in the changes files, and a .buildinfo file also exists. Fri May 5 19:25:31 UTC 2023 I: optimir from bookworm built successfully and reproducibly on i386. Fri May 5 19:25:39 UTC 2023 I: Submitting .buildinfo files to external archives: Fri May 5 19:25:39 UTC 2023 I: Submitting 8.0K b1/optimir_1.2-1_i386.buildinfo.asc Fri May 5 19:25:40 UTC 2023 I: Submitting 8.0K b2/optimir_1.2-1_i386.buildinfo.asc Fri May 5 19:25:41 UTC 2023 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Fri May 5 19:25:41 UTC 2023 I: Done submitting .buildinfo files. Fri May 5 19:25:41 UTC 2023 I: Removing signed optimir_1.2-1_i386.buildinfo.asc files: removed './b1/optimir_1.2-1_i386.buildinfo.asc' removed './b2/optimir_1.2-1_i386.buildinfo.asc'