Thu Apr 20 15:25:45 UTC 2023 I: starting to build libwfa2/bookworm/i386 on jenkins on '2023-04-20 15:25' Thu Apr 20 15:25:45 UTC 2023 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/i386_9/11282/console.log Thu Apr 20 15:25:45 UTC 2023 I: Downloading source for bookworm/libwfa2=2.3.3-1 --2023-04-20 15:25:46-- http://cdn-fastly.deb.debian.org/debian/pool/main/libw/libwfa2/libwfa2_2.3.3-1.dsc Connecting to 78.137.99.97:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2015 (2.0K) [text/prs.lines.tag] Saving to: ‘libwfa2_2.3.3-1.dsc’ 0K . 100% 149M=0s 2023-04-20 15:25:46 (149 MB/s) - ‘libwfa2_2.3.3-1.dsc’ saved [2015/2015] Thu Apr 20 15:25:46 UTC 2023 I: libwfa2_2.3.3-1.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: libwfa2 Binary: libwfa2-0, libwfa2-dev Architecture: any Version: 2.3.3-1 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille Homepage: https://github.com/smarco/WFA2-lib Standards-Version: 4.6.2 Vcs-Browser: https://salsa.debian.org/med-team/libwfa2 Vcs-Git: https://salsa.debian.org/med-team/libwfa2.git Build-Depends: debhelper-compat (= 13), d-shlibs, cmake, pkg-config Package-List: libwfa2-0 deb libs optional arch=any libwfa2-dev deb libdevel optional arch=any Checksums-Sha1: 17937ff2f103a414f2d27e9e85099d19cbabfafb 4151690 libwfa2_2.3.3.orig.tar.gz 0ef1edcedf04429b1db5dcf82acae0132d8623b9 3164 libwfa2_2.3.3-1.debian.tar.xz Checksums-Sha256: 2569650cdba395f42513a4d2c9175724a736047bb7da99a162c0abdbd651698f 4151690 libwfa2_2.3.3.orig.tar.gz e69597809ab3a13190d81efa305ead6c096dc72e5ffc31a31239ec14b598493b 3164 libwfa2_2.3.3-1.debian.tar.xz Files: 18374bd39147733bc378f8357c359515 4151690 libwfa2_2.3.3.orig.tar.gz c578fe85c33d78bc26db54557b8f2a5b 3164 libwfa2_2.3.3-1.debian.tar.xz -----BEGIN PGP SIGNATURE----- iQJFBAEBCAAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAmP7igMRHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtFTcQ/7BullZhGXIoRfqC9aZctMzsYfwc8jkS7F r3iE1j+KN2G7crZKIjKQRvc76fEViMX4H6TKH4vUNzs894F5rUdlCoO7Q/7wJQwo s8RxkJgcV0H6zD/DL2Ftgi/dbzNhBtiHSEcomK8mL6E5GP7opQAq39QozfowH7Qs pD7+l5UAEitRIyIffzha/i35n/bYBMoLT7GlU0QKtn3GOaFYhQyT4JAKPFcHnwGD c4KuYKplUvMhxrH2EoUbdfQh+tA4c2DFycwarJIG1vDcQ6x1Y98vVBICYX6h7pRi 7BtaGYv+qnFdr7w1Rpt+nV+xSKB7a0lJHMUPql1ryaj/SjCtbNTSw3AJ5jCZGgIP 0MZkbDiOB7ovKECyzmuz2RdF8wmrBE5lnEzN54nvfqg1UpuokgxELDg5Xq3DYu7n t0LTI+8BAlMd8n/+LQ3x83NyoNyk1UuEpju11kPU0wlQ560SVcWY63qoeI2IhfED OkbwixL1jbXGwlrBn4qbPmtKwJ4Lp8W/7SwZO5kMNg13JUWpx1kv7TjYXVSFPIDg X0uVO8D4pgZC9RGqiSEd4b0ytN8VKZp/Ad4xSIBI2xVeLifdLBpG2WSqRjmY9C/C aUDdCzsCqAvVsyixyANKVfMjvY/zhI4gCTj6enyHnynZH092WfVLNNAbpKCHkEx3 NCOM74mGllA= =GAuA -----END PGP SIGNATURE----- Thu Apr 20 15:25:46 UTC 2023 I: Checking whether the package is not for us Thu Apr 20 15:25:46 UTC 2023 I: Starting 1st build on remote node ionos2-i386.debian.net. Thu Apr 20 15:25:46 UTC 2023 I: Preparing to do remote build '1' on ionos2-i386.debian.net. Thu Apr 20 15:26:22 UTC 2023 I: Deleting $TMPDIR on ionos2-i386.debian.net. W: cgroups are not available on the host, not using them. unshare: unshare failed: Cannot allocate memory W: pbuilder: unshare CLONE_NEWNET not available I: pbuilder: network access is available during build! I: Current time: Thu Apr 20 03:25:47 -12 2023 I: pbuilder-time-stamp: 1682004347 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bookworm-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: using eatmydata during job I: Copying source file I: copying [libwfa2_2.3.3-1.dsc] I: copying [./libwfa2_2.3.3.orig.tar.gz] I: copying [./libwfa2_2.3.3-1.debian.tar.xz] I: Extracting source gpgv: Signature made Sun Feb 26 04:34:11 2023 -12 gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./libwfa2_2.3.3-1.dsc: no acceptable signature found dpkg-source: info: extracting libwfa2 in libwfa2-2.3.3 dpkg-source: info: unpacking libwfa2_2.3.3.orig.tar.gz dpkg-source: info: unpacking libwfa2_2.3.3-1.debian.tar.xz I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/15159/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='i386' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=8' DISTRIBUTION='bookworm' HOME='/root' HOST_ARCH='i386' IFS=' ' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' LD_LIBRARY_PATH='/usr/lib/libeatmydata' LD_PRELOAD='libeatmydata.so' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='15159' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.GdKvL0JY/pbuilderrc_wyTF --distribution bookworm --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.GdKvL0JY/b1 --logfile b1/build.log libwfa2_2.3.3-1.dsc' SUDO_GID='112' SUDO_UID='107' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/sbin/chroot' http_proxy='http://78.137.99.97:3128' I: uname -a Linux ionos2-i386 5.10.0-21-686-pae #1 SMP Debian 5.10.162-1 (2023-01-21) i686 GNU/Linux I: ls -l /bin total 6036 -rwxr-xr-x 1 root root 1408088 Feb 12 08:21 bash -rwxr-xr-x 3 root root 38404 Sep 18 2022 bunzip2 -rwxr-xr-x 3 root root 38404 Sep 18 2022 bzcat lrwxrwxrwx 1 root root 6 Sep 18 2022 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2225 Sep 18 2022 bzdiff lrwxrwxrwx 1 root root 6 Sep 18 2022 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4893 Nov 27 2021 bzexe lrwxrwxrwx 1 root root 6 Sep 18 2022 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3775 Sep 18 2022 bzgrep -rwxr-xr-x 3 root root 38404 Sep 18 2022 bzip2 -rwxr-xr-x 1 root root 17892 Sep 18 2022 bzip2recover lrwxrwxrwx 1 root root 6 Sep 18 2022 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Sep 18 2022 bzmore -rwxr-xr-x 1 root root 42920 Sep 20 2022 cat -rwxr-xr-x 1 root root 79816 Sep 20 2022 chgrp -rwxr-xr-x 1 root root 67496 Sep 20 2022 chmod -rwxr-xr-x 1 root root 79816 Sep 20 2022 chown -rwxr-xr-x 1 root root 162024 Sep 20 2022 cp -rwxr-xr-x 1 root root 136916 Jan 5 01:20 dash -rwxr-xr-x 1 root root 137160 Sep 20 2022 date -rwxr-xr-x 1 root root 100364 Sep 20 2022 dd -rwxr-xr-x 1 root root 108940 Sep 20 2022 df -rwxr-xr-x 1 root root 162152 Sep 20 2022 dir -rwxr-xr-x 1 root root 87760 Mar 22 22:20 dmesg lrwxrwxrwx 1 root root 8 Dec 19 01:33 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Dec 19 01:33 domainname -> hostname -rwxr-xr-x 1 root root 38760 Sep 20 2022 echo -rwxr-xr-x 1 root root 41 Jan 24 02:43 egrep -rwxr-xr-x 1 root root 34664 Sep 20 2022 false -rwxr-xr-x 1 root root 41 Jan 24 02:43 fgrep -rwxr-xr-x 1 root root 84272 Mar 22 22:20 findmnt -rwsr-xr-x 1 root root 30240 Mar 22 20:38 fusermount -rwxr-xr-x 1 root root 218680 Jan 24 02:43 grep -rwxr-xr-x 2 root root 2346 Apr 9 2022 gunzip -rwxr-xr-x 1 root root 6447 Apr 9 2022 gzexe -rwxr-xr-x 1 root root 100952 Apr 9 2022 gzip -rwxr-xr-x 1 root root 21916 Dec 19 01:33 hostname -rwxr-xr-x 1 root root 75756 Sep 20 2022 ln -rwxr-xr-x 1 root root 55600 Mar 22 23:43 login -rwxr-xr-x 1 root root 162152 Sep 20 2022 ls -rwxr-xr-x 1 root root 214568 Mar 22 22:20 lsblk -rwxr-xr-x 1 root root 96328 Sep 20 2022 mkdir -rwxr-xr-x 1 root root 84008 Sep 20 2022 mknod -rwxr-xr-x 1 root root 38792 Sep 20 2022 mktemp -rwxr-xr-x 1 root root 63016 Mar 22 22:20 more -rwsr-xr-x 1 root root 58912 Mar 22 22:20 mount -rwxr-xr-x 1 root root 13856 Mar 22 22:20 mountpoint -rwxr-xr-x 1 root root 157932 Sep 20 2022 mv lrwxrwxrwx 1 root root 8 Dec 19 01:33 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Apr 2 18:25 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 38792 Sep 20 2022 pwd lrwxrwxrwx 1 root root 4 Feb 12 08:21 rbash -> bash -rwxr-xr-x 1 root root 51080 Sep 20 2022 readlink -rwxr-xr-x 1 root root 75720 Sep 20 2022 rm -rwxr-xr-x 1 root root 51080 Sep 20 2022 rmdir -rwxr-xr-x 1 root root 22308 Nov 2 04:31 run-parts -rwxr-xr-x 1 root root 133224 Jan 5 07:55 sed lrwxrwxrwx 1 root root 4 Jan 5 01:20 sh -> dash -rwxr-xr-x 1 root root 38760 Sep 20 2022 sleep -rwxr-xr-x 1 root root 87976 Sep 20 2022 stty -rwsr-xr-x 1 root root 83492 Mar 22 22:20 su -rwxr-xr-x 1 root root 38792 Sep 20 2022 sync -rwxr-xr-x 1 root root 598456 Apr 6 02:25 tar -rwxr-xr-x 1 root root 13860 Nov 2 04:31 tempfile -rwxr-xr-x 1 root root 120776 Sep 20 2022 touch -rwxr-xr-x 1 root root 34664 Sep 20 2022 true -rwxr-xr-x 1 root root 17892 Mar 22 20:38 ulockmgr_server -rwsr-xr-x 1 root root 30236 Mar 22 22:20 umount -rwxr-xr-x 1 root root 38760 Sep 20 2022 uname -rwxr-xr-x 2 root root 2346 Apr 9 2022 uncompress -rwxr-xr-x 1 root root 162152 Sep 20 2022 vdir -rwxr-xr-x 1 root root 71216 Mar 22 22:20 wdctl lrwxrwxrwx 1 root root 8 Dec 19 01:33 ypdomainname -> hostname -rwxr-xr-x 1 root root 1984 Apr 9 2022 zcat -rwxr-xr-x 1 root root 1678 Apr 9 2022 zcmp -rwxr-xr-x 1 root root 6460 Apr 9 2022 zdiff -rwxr-xr-x 1 root root 29 Apr 9 2022 zegrep -rwxr-xr-x 1 root root 29 Apr 9 2022 zfgrep -rwxr-xr-x 1 root root 2081 Apr 9 2022 zforce -rwxr-xr-x 1 root root 8103 Apr 9 2022 zgrep -rwxr-xr-x 1 root root 2206 Apr 9 2022 zless -rwxr-xr-x 1 root root 1842 Apr 9 2022 zmore -rwxr-xr-x 1 root root 4577 Apr 9 2022 znew I: user script /srv/workspace/pbuilder/15159/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: i386 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), d-shlibs, cmake, pkg-config dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19604 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on d-shlibs; however: Package d-shlibs is not installed. pbuilder-satisfydepends-dummy depends on cmake; however: Package cmake is not installed. pbuilder-satisfydepends-dummy depends on pkg-config; however: Package pkg-config is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} cmake{a} cmake-data{a} d-shlibs{a} debhelper{a} dh-autoreconf{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} intltool-debian{a} libarchive-zip-perl{a} libarchive13{a} libbrotli1{a} libcurl4{a} libdebhelper-perl{a} libelf1{a} libexpat1{a} libfile-stripnondeterminism-perl{a} libicu72{a} libjsoncpp25{a} libldap-2.5-0{a} libmagic-mgc{a} libmagic1{a} libnghttp2-14{a} libpipeline1{a} libpkgconf3{a} libproc2-0{a} libpsl5{a} librhash0{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libssh2-1{a} libsub-override-perl{a} libtool{a} libuchardet0{a} libuv1{a} libxml2{a} m4{a} man-db{a} pkg-config{a} pkgconf{a} pkgconf-bin{a} po-debconf{a} procps{a} sensible-utils{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl libarchive-cpio-perl libldap-common libltdl-dev libmail-sendmail-perl libsasl2-modules lynx psmisc publicsuffix wget 0 packages upgraded, 53 newly installed, 0 to remove and 0 not upgraded. Need to get 33.9 MB of archives. After unpacking 124 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian bookworm/main i386 libproc2-0 i386 2:4.0.2-3 [63.7 kB] Get: 2 http://deb.debian.org/debian bookworm/main i386 procps i386 2:4.0.2-3 [706 kB] Get: 3 http://deb.debian.org/debian bookworm/main i386 sensible-utils all 0.0.17+nmu1 [19.0 kB] Get: 4 http://deb.debian.org/debian bookworm/main i386 libmagic-mgc i386 1:5.44-3 [305 kB] Get: 5 http://deb.debian.org/debian bookworm/main i386 libmagic1 i386 1:5.44-3 [114 kB] Get: 6 http://deb.debian.org/debian bookworm/main i386 file i386 1:5.44-3 [42.5 kB] Get: 7 http://deb.debian.org/debian bookworm/main i386 gettext-base i386 0.21-12 [162 kB] Get: 8 http://deb.debian.org/debian bookworm/main i386 libuchardet0 i386 0.0.7-1 [67.9 kB] Get: 9 http://deb.debian.org/debian bookworm/main i386 groff-base i386 1.22.4-10 [932 kB] Get: 10 http://deb.debian.org/debian bookworm/main i386 bsdextrautils i386 2.38.1-5+b1 [90.3 kB] Get: 11 http://deb.debian.org/debian bookworm/main i386 libpipeline1 i386 1.5.7-1 [40.0 kB] Get: 12 http://deb.debian.org/debian bookworm/main i386 man-db i386 2.11.2-2 [1397 kB] Get: 13 http://deb.debian.org/debian bookworm/main i386 m4 i386 1.4.19-3 [294 kB] Get: 14 http://deb.debian.org/debian bookworm/main i386 autoconf all 2.71-3 [332 kB] Get: 15 http://deb.debian.org/debian bookworm/main i386 autotools-dev all 20220109.1 [51.6 kB] Get: 16 http://deb.debian.org/debian bookworm/main i386 automake all 1:1.16.5-1.3 [823 kB] Get: 17 http://deb.debian.org/debian bookworm/main i386 autopoint all 0.21-12 [495 kB] Get: 18 http://deb.debian.org/debian bookworm/main i386 libicu72 i386 72.1-3 [9541 kB] Get: 19 http://deb.debian.org/debian bookworm/main i386 libxml2 i386 2.9.14+dfsg-1.1+b3 [720 kB] Get: 20 http://deb.debian.org/debian bookworm/main i386 libarchive13 i386 3.6.2-1 [385 kB] Get: 21 http://deb.debian.org/debian bookworm/main i386 libbrotli1 i386 1.0.9-2+b6 [275 kB] Get: 22 http://deb.debian.org/debian bookworm/main i386 libsasl2-modules-db i386 2.1.28+dfsg-10 [21.4 kB] Get: 23 http://deb.debian.org/debian bookworm/main i386 libsasl2-2 i386 2.1.28+dfsg-10 [62.7 kB] Get: 24 http://deb.debian.org/debian bookworm/main i386 libldap-2.5-0 i386 2.5.13+dfsg-5 [196 kB] Get: 25 http://deb.debian.org/debian bookworm/main i386 libnghttp2-14 i386 1.52.0-1 [79.8 kB] Get: 26 http://deb.debian.org/debian bookworm/main i386 libpsl5 i386 0.21.2-1 [59.3 kB] Get: 27 http://deb.debian.org/debian bookworm/main i386 librtmp1 i386 2.4+20151223.gitfa8646d.1-2+b2 [64.3 kB] Get: 28 http://deb.debian.org/debian bookworm/main i386 libssh2-1 i386 1.10.0-3+b1 [187 kB] Get: 29 http://deb.debian.org/debian bookworm/main i386 libcurl4 i386 7.88.1-8 [419 kB] Get: 30 http://deb.debian.org/debian bookworm/main i386 libexpat1 i386 2.5.0-1 [103 kB] Get: 31 http://deb.debian.org/debian bookworm/main i386 libjsoncpp25 i386 1.9.5-4 [86.2 kB] Get: 32 http://deb.debian.org/debian bookworm/main i386 librhash0 i386 1.4.3-3 [149 kB] Get: 33 http://deb.debian.org/debian bookworm/main i386 libuv1 i386 1.44.2-1 [147 kB] Get: 34 http://deb.debian.org/debian bookworm/main i386 cmake-data all 3.25.1-1 [2026 kB] Get: 35 http://deb.debian.org/debian bookworm/main i386 cmake i386 3.25.1-1 [9767 kB] Get: 36 http://deb.debian.org/debian bookworm/main i386 d-shlibs all 0.104 [18.6 kB] Get: 37 http://deb.debian.org/debian bookworm/main i386 libdebhelper-perl all 13.11.4 [81.2 kB] Get: 38 http://deb.debian.org/debian bookworm/main i386 libtool all 2.4.7-5 [517 kB] Get: 39 http://deb.debian.org/debian bookworm/main i386 dh-autoreconf all 20 [17.1 kB] Get: 40 http://deb.debian.org/debian bookworm/main i386 libarchive-zip-perl all 1.68-1 [104 kB] Get: 41 http://deb.debian.org/debian bookworm/main i386 libsub-override-perl all 0.09-4 [9304 B] Get: 42 http://deb.debian.org/debian bookworm/main i386 libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get: 43 http://deb.debian.org/debian bookworm/main i386 dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get: 44 http://deb.debian.org/debian bookworm/main i386 libelf1 i386 0.188-2.1 [179 kB] Get: 45 http://deb.debian.org/debian bookworm/main i386 dwz i386 0.15-1 [118 kB] Get: 46 http://deb.debian.org/debian bookworm/main i386 gettext i386 0.21-12 [1311 kB] Get: 47 http://deb.debian.org/debian bookworm/main i386 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 48 http://deb.debian.org/debian bookworm/main i386 po-debconf all 1.0.21+nmu1 [248 kB] Get: 49 http://deb.debian.org/debian bookworm/main i386 debhelper all 13.11.4 [942 kB] Get: 50 http://deb.debian.org/debian bookworm/main i386 libpkgconf3 i386 1.8.1-1 [38.3 kB] Get: 51 http://deb.debian.org/debian bookworm/main i386 pkgconf-bin i386 1.8.1-1 [29.8 kB] Get: 52 http://deb.debian.org/debian bookworm/main i386 pkgconf i386 1.8.1-1 [25.9 kB] Get: 53 http://deb.debian.org/debian bookworm/main i386 pkg-config i386 1.8.1-1 [13.7 kB] Fetched 33.9 MB in 1s (46.2 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libproc2-0:i386. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19604 files and directories currently installed.) Preparing to unpack .../00-libproc2-0_2%3a4.0.2-3_i386.deb ... Unpacking libproc2-0:i386 (2:4.0.2-3) ... Selecting previously unselected package procps. Preparing to unpack .../01-procps_2%3a4.0.2-3_i386.deb ... Unpacking procps (2:4.0.2-3) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../02-sensible-utils_0.0.17+nmu1_all.deb ... Unpacking sensible-utils (0.0.17+nmu1) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../03-libmagic-mgc_1%3a5.44-3_i386.deb ... Unpacking libmagic-mgc (1:5.44-3) ... Selecting previously unselected package libmagic1:i386. Preparing to unpack .../04-libmagic1_1%3a5.44-3_i386.deb ... Unpacking libmagic1:i386 (1:5.44-3) ... Selecting previously unselected package file. Preparing to unpack .../05-file_1%3a5.44-3_i386.deb ... Unpacking file (1:5.44-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../06-gettext-base_0.21-12_i386.deb ... Unpacking gettext-base (0.21-12) ... Selecting previously unselected package libuchardet0:i386. Preparing to unpack .../07-libuchardet0_0.0.7-1_i386.deb ... Unpacking libuchardet0:i386 (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../08-groff-base_1.22.4-10_i386.deb ... Unpacking groff-base (1.22.4-10) ... 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Setting up pkgconf-bin (1.8.1-1) ... Setting up libsasl2-2:i386 (2.1.28+dfsg-10) ... Setting up autoconf (2.71-3) ... Setting up sensible-utils (0.0.17+nmu1) ... Setting up librhash0:i386 (1.4.3-3) ... Setting up libuchardet0:i386 (0.0.7-1) ... Setting up procps (2:4.0.2-3) ... Setting up libsub-override-perl (0.09-4) ... Setting up libssh2-1:i386 (1.10.0-3+b1) ... Setting up cmake-data (3.25.1-1) ... Setting up libelf1:i386 (0.188-2.1) ... Setting up libxml2:i386 (2.9.14+dfsg-1.1+b3) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.13.1-1) ... Setting up gettext (0.21-12) ... Setting up libtool (2.4.7-5) ... Setting up libarchive13:i386 (3.6.2-1) ... Setting up libldap-2.5-0:i386 (2.5.13+dfsg-5) ... Setting up pkgconf:i386 (1.8.1-1) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... 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Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/libwfa2-2.3.3/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../libwfa2_2.3.3-1_source.changes dpkg-buildpackage: info: source package libwfa2 dpkg-buildpackage: info: source version 2.3.3-1 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Andreas Tille dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 debian/rules clean dh clean --buildsystem=cmake dh_auto_clean -O--buildsystem=cmake dh_autoreconf_clean -O--buildsystem=cmake dh_clean -O--buildsystem=cmake debian/rules binary dh binary --buildsystem=cmake dh_update_autotools_config -O--buildsystem=cmake dh_autoreconf -O--buildsystem=cmake dh_auto_configure -O--buildsystem=cmake cd obj-i686-linux-gnu && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_USE_PACKAGE_REGISTRY=OFF -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DFETCHCONTENT_FULLY_DISCONNECTED=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run -DCMAKE_SKIP_INSTALL_ALL_DEPENDENCY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/i386-linux-gnu .. -- The C compiler identification is GNU 12.2.0 -- The CXX compiler identification is GNU 12.2.0 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/cc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Found PkgConfig: /usr/bin/pkg-config (found version "1.8.1") -- -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success -- Found Threads: TRUE -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY FETCHCONTENT_FULLY_DISCONNECTED -- Build files have been written to: /build/libwfa2-2.3.3/obj-i686-linux-gnu dh_auto_build -O--buildsystem=cmake cd obj-i686-linux-gnu && make -j8 "INSTALL=install --strip-program=true" VERBOSE=1 make[1]: Entering directory '/build/libwfa2-2.3.3/obj-i686-linux-gnu' /usr/bin/cmake -S/build/libwfa2-2.3.3 -B/build/libwfa2-2.3.3/obj-i686-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /build/libwfa2-2.3.3/obj-i686-linux-gnu/CMakeFiles /build/libwfa2-2.3.3/obj-i686-linux-gnu//CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/build/libwfa2-2.3.3/obj-i686-linux-gnu' make -f CMakeFiles/wfa2_static.dir/build.make CMakeFiles/wfa2_static.dir/depend make -f CMakeFiles/wfa2.dir/build.make CMakeFiles/wfa2.dir/depend make[3]: Entering directory '/build/libwfa2-2.3.3/obj-i686-linux-gnu' cd /build/libwfa2-2.3.3/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libwfa2-2.3.3 /build/libwfa2-2.3.3 /build/libwfa2-2.3.3/obj-i686-linux-gnu /build/libwfa2-2.3.3/obj-i686-linux-gnu /build/libwfa2-2.3.3/obj-i686-linux-gnu/CMakeFiles/wfa2.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/libwfa2-2.3.3/obj-i686-linux-gnu' cd /build/libwfa2-2.3.3/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libwfa2-2.3.3 /build/libwfa2-2.3.3 /build/libwfa2-2.3.3/obj-i686-linux-gnu /build/libwfa2-2.3.3/obj-i686-linux-gnu /build/libwfa2-2.3.3/obj-i686-linux-gnu/CMakeFiles/wfa2_static.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/libwfa2-2.3.3/obj-i686-linux-gnu' make[3]: Leaving directory '/build/libwfa2-2.3.3/obj-i686-linux-gnu' make -f CMakeFiles/wfa2.dir/build.make CMakeFiles/wfa2.dir/build make -f CMakeFiles/wfa2_static.dir/build.make CMakeFiles/wfa2_static.dir/build make[3]: Entering directory '/build/libwfa2-2.3.3/obj-i686-linux-gnu' make[3]: Entering directory '/build/libwfa2-2.3.3/obj-i686-linux-gnu' [ 1%] Building C object CMakeFiles/wfa2.dir/wavefront/wavefront_align.c.o [ 3%] Building C object CMakeFiles/wfa2.dir/wavefront/wavefront_aligner.c.o [ 3%] Building C object CMakeFiles/wfa2_static.dir/wavefront/wavefront_align.c.o [ 4%] Building C object CMakeFiles/wfa2_static.dir/wavefront/wavefront_attributes.c.o /usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -Dwfa2_EXPORTS -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time 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CMakeFiles/wfa2_static.dir/wavefront/wavefront_aligner.c.o /usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2_static.dir/wavefront/wavefront_aligner.c.o -MF CMakeFiles/wfa2_static.dir/wavefront/wavefront_aligner.c.o.d -o CMakeFiles/wfa2_static.dir/wavefront/wavefront_aligner.c.o -c /build/libwfa2-2.3.3/wavefront/wavefront_aligner.c /usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -Dwfa2_EXPORTS -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2.dir/wavefront/wavefront_attributes.c.o -MF CMakeFiles/wfa2.dir/wavefront/wavefront_attributes.c.o.d -o CMakeFiles/wfa2.dir/wavefront/wavefront_attributes.c.o -c /build/libwfa2-2.3.3/wavefront/wavefront_attributes.c [ 9%] Building C object CMakeFiles/wfa2.dir/wavefront/wavefront_backtrace_buffer.c.o [ 9%] Building C object CMakeFiles/wfa2_static.dir/wavefront/wavefront_backtrace_buffer.c.o /usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -Dwfa2_EXPORTS -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2.dir/wavefront/wavefront_backtrace_buffer.c.o -MF CMakeFiles/wfa2.dir/wavefront/wavefront_backtrace_buffer.c.o.d -o CMakeFiles/wfa2.dir/wavefront/wavefront_backtrace_buffer.c.o -c /build/libwfa2-2.3.3/wavefront/wavefront_backtrace_buffer.c /usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2_static.dir/wavefront/wavefront_backtrace_buffer.c.o -MF CMakeFiles/wfa2_static.dir/wavefront/wavefront_backtrace_buffer.c.o.d -o CMakeFiles/wfa2_static.dir/wavefront/wavefront_backtrace_buffer.c.o -c /build/libwfa2-2.3.3/wavefront/wavefront_backtrace_buffer.c /build/libwfa2-2.3.3/wavefront/wavefront_backtrace_buffer.c: In function ‘wf_backtrace_buffer_compact_marked’: /build/libwfa2-2.3.3/wavefront/wavefront_backtrace_buffer.c:522:61: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 3 has type ‘bt_block_idx_t’ {aka ‘unsigned int’} [-Wformat=] 522 | fprintf(stderr,"[WFA::BacktraceBuffer] Compacted from %lu MB to %lu MB (%2.2f%%)", | ~~^ | | | long unsigned int | %u /build/libwfa2-2.3.3/wavefront/wavefront_backtrace_buffer.c:522:71: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 4 has type ‘bt_block_idx_t’ {aka ‘unsigned int’} [-Wformat=] 522 | fprintf(stderr,"[WFA::BacktraceBuffer] Compacted from %lu MB to %lu MB (%2.2f%%)", | ~~^ | | | long unsigned int | %u /build/libwfa2-2.3.3/wavefront/wavefront_backtrace_buffer.c: In function ‘wf_backtrace_buffer_compact_marked’: /build/libwfa2-2.3.3/wavefront/wavefront_backtrace_buffer.c:522:61: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 3 has type ‘bt_block_idx_t’ {aka ‘unsigned int’} [-Wformat=] 522 | fprintf(stderr,"[WFA::BacktraceBuffer] Compacted from %lu MB to %lu MB (%2.2f%%)", | ~~^ | | | long unsigned int | %u /build/libwfa2-2.3.3/wavefront/wavefront_backtrace_buffer.c:522:71: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 4 has type ‘bt_block_idx_t’ {aka ‘unsigned int’} [-Wformat=] 522 | fprintf(stderr,"[WFA::BacktraceBuffer] Compacted from %lu MB to %lu MB (%2.2f%%)", | ~~^ | | | long unsigned int | %u [ 10%] Building C object CMakeFiles/wfa2.dir/wavefront/wavefront_backtrace.c.o /usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -Dwfa2_EXPORTS -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2.dir/wavefront/wavefront_backtrace.c.o -MF CMakeFiles/wfa2.dir/wavefront/wavefront_backtrace.c.o.d -o CMakeFiles/wfa2.dir/wavefront/wavefront_backtrace.c.o -c /build/libwfa2-2.3.3/wavefront/wavefront_backtrace.c [ 11%] Building C object CMakeFiles/wfa2_static.dir/wavefront/wavefront_backtrace.c.o /usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2_static.dir/wavefront/wavefront_backtrace.c.o -MF CMakeFiles/wfa2_static.dir/wavefront/wavefront_backtrace.c.o.d -o CMakeFiles/wfa2_static.dir/wavefront/wavefront_backtrace.c.o -c /build/libwfa2-2.3.3/wavefront/wavefront_backtrace.c [ 13%] Building C object CMakeFiles/wfa2.dir/wavefront/wavefront_backtrace_offload.c.o /usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -Dwfa2_EXPORTS -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2.dir/wavefront/wavefront_backtrace_offload.c.o -MF CMakeFiles/wfa2.dir/wavefront/wavefront_backtrace_offload.c.o.d -o CMakeFiles/wfa2.dir/wavefront/wavefront_backtrace_offload.c.o -c /build/libwfa2-2.3.3/wavefront/wavefront_backtrace_offload.c [ 14%] Building C object CMakeFiles/wfa2_static.dir/wavefront/wavefront_backtrace_offload.c.o /usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2_static.dir/wavefront/wavefront_backtrace_offload.c.o -MF CMakeFiles/wfa2_static.dir/wavefront/wavefront_backtrace_offload.c.o.d -o CMakeFiles/wfa2_static.dir/wavefront/wavefront_backtrace_offload.c.o -c /build/libwfa2-2.3.3/wavefront/wavefront_backtrace_offload.c [ 15%] Building C object CMakeFiles/wfa2.dir/wavefront/wavefront_bialign.c.o /usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -Dwfa2_EXPORTS -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2.dir/wavefront/wavefront_bialign.c.o -MF CMakeFiles/wfa2.dir/wavefront/wavefront_bialign.c.o.d -o CMakeFiles/wfa2.dir/wavefront/wavefront_bialign.c.o -c /build/libwfa2-2.3.3/wavefront/wavefront_bialign.c [ 16%] Building C object CMakeFiles/wfa2_static.dir/wavefront/wavefront_bialign.c.o /usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2_static.dir/wavefront/wavefront_bialign.c.o -MF CMakeFiles/wfa2_static.dir/wavefront/wavefront_bialign.c.o.d -o CMakeFiles/wfa2_static.dir/wavefront/wavefront_bialign.c.o -c /build/libwfa2-2.3.3/wavefront/wavefront_bialign.c [ 17%] Building C object CMakeFiles/wfa2_static.dir/wavefront/wavefront_bialigner.c.o /usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2_static.dir/wavefront/wavefront_bialigner.c.o -MF CMakeFiles/wfa2_static.dir/wavefront/wavefront_bialigner.c.o.d -o CMakeFiles/wfa2_static.dir/wavefront/wavefront_bialigner.c.o -c /build/libwfa2-2.3.3/wavefront/wavefront_bialigner.c [ 19%] Building C object CMakeFiles/wfa2.dir/wavefront/wavefront_bialigner.c.o /usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -Dwfa2_EXPORTS -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC 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-I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2_static.dir/wavefront/wavefront.c.o -MF CMakeFiles/wfa2_static.dir/wavefront/wavefront.c.o.d -o CMakeFiles/wfa2_static.dir/wavefront/wavefront.c.o -c /build/libwfa2-2.3.3/wavefront/wavefront.c [ 22%] Building C object CMakeFiles/wfa2_static.dir/wavefront/wavefront_components.c.o /usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2_static.dir/wavefront/wavefront_components.c.o -MF CMakeFiles/wfa2_static.dir/wavefront/wavefront_components.c.o.d -o CMakeFiles/wfa2_static.dir/wavefront/wavefront_components.c.o -c /build/libwfa2-2.3.3/wavefront/wavefront_components.c [ 23%] Building C object CMakeFiles/wfa2.dir/wavefront/wavefront_components.c.o /usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -Dwfa2_EXPORTS -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2.dir/wavefront/wavefront_components.c.o -MF CMakeFiles/wfa2.dir/wavefront/wavefront_components.c.o.d -o CMakeFiles/wfa2.dir/wavefront/wavefront_components.c.o -c /build/libwfa2-2.3.3/wavefront/wavefront_components.c [ 25%] Building C object CMakeFiles/wfa2_static.dir/wavefront/wavefront_compute_affine2p.c.o [ 26%] Building C object CMakeFiles/wfa2.dir/wavefront/wavefront_compute_affine2p.c.o /usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2_static.dir/wavefront/wavefront_compute_affine2p.c.o -MF CMakeFiles/wfa2_static.dir/wavefront/wavefront_compute_affine2p.c.o.d -o CMakeFiles/wfa2_static.dir/wavefront/wavefront_compute_affine2p.c.o -c /build/libwfa2-2.3.3/wavefront/wavefront_compute_affine2p.c /usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -Dwfa2_EXPORTS -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2.dir/wavefront/wavefront_compute_affine2p.c.o -MF CMakeFiles/wfa2.dir/wavefront/wavefront_compute_affine2p.c.o.d -o CMakeFiles/wfa2.dir/wavefront/wavefront_compute_affine2p.c.o -c /build/libwfa2-2.3.3/wavefront/wavefront_compute_affine2p.c [ 27%] Building C object CMakeFiles/wfa2.dir/wavefront/wavefront_compute_affine.c.o /usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -Dwfa2_EXPORTS -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2.dir/wavefront/wavefront_compute_affine.c.o -MF CMakeFiles/wfa2.dir/wavefront/wavefront_compute_affine.c.o.d -o CMakeFiles/wfa2.dir/wavefront/wavefront_compute_affine.c.o -c /build/libwfa2-2.3.3/wavefront/wavefront_compute_affine.c [ 28%] Building C object CMakeFiles/wfa2_static.dir/wavefront/wavefront_compute_affine.c.o /usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time 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/usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2_static.dir/wavefront/wavefront_compute.c.o -MF CMakeFiles/wfa2_static.dir/wavefront/wavefront_compute.c.o.d -o CMakeFiles/wfa2_static.dir/wavefront/wavefront_compute.c.o -c /build/libwfa2-2.3.3/wavefront/wavefront_compute.c [ 32%] Building C object CMakeFiles/wfa2.dir/wavefront/wavefront_compute_edit.c.o /usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -Dwfa2_EXPORTS -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2.dir/wavefront/wavefront_compute_edit.c.o -MF CMakeFiles/wfa2.dir/wavefront/wavefront_compute_edit.c.o.d -o CMakeFiles/wfa2.dir/wavefront/wavefront_compute_edit.c.o -c /build/libwfa2-2.3.3/wavefront/wavefront_compute_edit.c [ 33%] Building C object CMakeFiles/wfa2_static.dir/wavefront/wavefront_compute_edit.c.o /usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2_static.dir/wavefront/wavefront_compute_edit.c.o -MF CMakeFiles/wfa2_static.dir/wavefront/wavefront_compute_edit.c.o.d -o CMakeFiles/wfa2_static.dir/wavefront/wavefront_compute_edit.c.o -c /build/libwfa2-2.3.3/wavefront/wavefront_compute_edit.c [ 34%] Building C object CMakeFiles/wfa2_static.dir/wavefront/wavefront_compute_linear.c.o /usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2_static.dir/wavefront/wavefront_compute_linear.c.o -MF CMakeFiles/wfa2_static.dir/wavefront/wavefront_compute_linear.c.o.d -o CMakeFiles/wfa2_static.dir/wavefront/wavefront_compute_linear.c.o -c /build/libwfa2-2.3.3/wavefront/wavefront_compute_linear.c [ 36%] Building C object CMakeFiles/wfa2_static.dir/wavefront/wavefront_debug.c.o [ 36%] Building C object CMakeFiles/wfa2.dir/wavefront/wavefront_compute_linear.c.o /usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -Dwfa2_EXPORTS -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2.dir/wavefront/wavefront_compute_linear.c.o -MF CMakeFiles/wfa2.dir/wavefront/wavefront_compute_linear.c.o.d -o CMakeFiles/wfa2.dir/wavefront/wavefront_compute_linear.c.o -c /build/libwfa2-2.3.3/wavefront/wavefront_compute_linear.c /usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2_static.dir/wavefront/wavefront_debug.c.o -MF CMakeFiles/wfa2_static.dir/wavefront/wavefront_debug.c.o.d -o CMakeFiles/wfa2_static.dir/wavefront/wavefront_debug.c.o -c /build/libwfa2-2.3.3/wavefront/wavefront_debug.c [ 38%] Building C object CMakeFiles/wfa2_static.dir/wavefront/wavefront_display.c.o /usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2_static.dir/wavefront/wavefront_display.c.o -MF CMakeFiles/wfa2_static.dir/wavefront/wavefront_display.c.o.d -o CMakeFiles/wfa2_static.dir/wavefront/wavefront_display.c.o -c /build/libwfa2-2.3.3/wavefront/wavefront_display.c /build/libwfa2-2.3.3/wavefront/wavefront_debug.c: In function ‘wavefront_report_lite’: /build/libwfa2-2.3.3/wavefront/wavefront_debug.c:142:23: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 3 has type ‘uint64_t’ {aka ‘long long unsigned int’} [-Wformat=] 142 | fprintf(stream,"\t%luMB\t",CONVERT_B_TO_MB(memory_used)); | ~~^ | | | long unsigned int | %llu /build/libwfa2-2.3.3/wavefront/wavefront_debug.c: In function ‘wavefront_report_verbose_begin’: /build/libwfa2-2.3.3/wavefront/wavefront_debug.c:188:38: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 4 has type ‘uint64_t’ {aka ‘long long unsigned int’} [-Wformat=] 188 | fprintf(stream," Memory.mode=(%d,%luMB,%luMB,%luMB)\n", | ~~^ | | | long unsigned int | %llu /build/libwfa2-2.3.3/wavefront/wavefront_debug.c:188:44: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 5 has type ‘uint64_t’ {aka ‘long long unsigned int’} [-Wformat=] 188 | fprintf(stream," Memory.mode=(%d,%luMB,%luMB,%luMB)\n", | ~~^ | | | long unsigned int | %llu /build/libwfa2-2.3.3/wavefront/wavefront_debug.c:188:50: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 6 has type ‘uint64_t’ {aka ‘long long unsigned int’} [-Wformat=] 188 | fprintf(stream," Memory.mode=(%d,%luMB,%luMB,%luMB)\n", | ~~^ | | | long unsigned int | %llu /build/libwfa2-2.3.3/wavefront/wavefront_debug.c: In function ‘wavefront_report_verbose_end’: /build/libwfa2-2.3.3/wavefront/wavefront_debug.c:201:34: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 3 has type ‘uint64_t’ {aka ‘long long unsigned int’} [-Wformat=] 201 | fprintf(stream," Memory.used=%luMB", | ~~^ | | | long unsigned int | %llu [ 39%] Building C object CMakeFiles/wfa2.dir/wavefront/wavefront_debug.c.o /usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -Dwfa2_EXPORTS -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2.dir/wavefront/wavefront_debug.c.o -MF CMakeFiles/wfa2.dir/wavefront/wavefront_debug.c.o.d -o CMakeFiles/wfa2.dir/wavefront/wavefront_debug.c.o -c /build/libwfa2-2.3.3/wavefront/wavefront_debug.c [ 40%] Building C object CMakeFiles/wfa2_static.dir/wavefront/wavefront_extend.c.o /usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2_static.dir/wavefront/wavefront_extend.c.o -MF CMakeFiles/wfa2_static.dir/wavefront/wavefront_extend.c.o.d -o CMakeFiles/wfa2_static.dir/wavefront/wavefront_extend.c.o -c /build/libwfa2-2.3.3/wavefront/wavefront_extend.c [ 41%] Building C object CMakeFiles/wfa2.dir/wavefront/wavefront_display.c.o /usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -Dwfa2_EXPORTS -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2.dir/wavefront/wavefront_display.c.o -MF CMakeFiles/wfa2.dir/wavefront/wavefront_display.c.o.d -o CMakeFiles/wfa2.dir/wavefront/wavefront_display.c.o -c /build/libwfa2-2.3.3/wavefront/wavefront_display.c [ 42%] Building C object CMakeFiles/wfa2.dir/wavefront/wavefront_extend.c.o /usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -Dwfa2_EXPORTS -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2.dir/wavefront/wavefront_extend.c.o -MF CMakeFiles/wfa2.dir/wavefront/wavefront_extend.c.o.d -o CMakeFiles/wfa2.dir/wavefront/wavefront_extend.c.o -c /build/libwfa2-2.3.3/wavefront/wavefront_extend.c [ 44%] Building C object CMakeFiles/wfa2_static.dir/wavefront/wavefront_heuristic.c.o /usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2_static.dir/wavefront/wavefront_heuristic.c.o -MF CMakeFiles/wfa2_static.dir/wavefront/wavefront_heuristic.c.o.d -o CMakeFiles/wfa2_static.dir/wavefront/wavefront_heuristic.c.o -c /build/libwfa2-2.3.3/wavefront/wavefront_heuristic.c [ 45%] Building C object CMakeFiles/wfa2.dir/wavefront/wavefront_heuristic.c.o /usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -Dwfa2_EXPORTS -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2.dir/wavefront/wavefront_heuristic.c.o -MF CMakeFiles/wfa2.dir/wavefront/wavefront_heuristic.c.o.d -o CMakeFiles/wfa2.dir/wavefront/wavefront_heuristic.c.o -c /build/libwfa2-2.3.3/wavefront/wavefront_heuristic.c /build/libwfa2-2.3.3/wavefront/wavefront_debug.c: In function ‘wavefront_report_lite’: /build/libwfa2-2.3.3/wavefront/wavefront_debug.c:142:23: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 3 has type ‘uint64_t’ {aka ‘long long unsigned int’} [-Wformat=] 142 | fprintf(stream,"\t%luMB\t",CONVERT_B_TO_MB(memory_used)); | ~~^ | | | long unsigned int | %llu /build/libwfa2-2.3.3/wavefront/wavefront_debug.c: In function ‘wavefront_report_verbose_begin’: /build/libwfa2-2.3.3/wavefront/wavefront_debug.c:188:38: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 4 has type ‘uint64_t’ {aka ‘long long unsigned int’} [-Wformat=] 188 | fprintf(stream," Memory.mode=(%d,%luMB,%luMB,%luMB)\n", | ~~^ | | | long unsigned int | %llu /build/libwfa2-2.3.3/wavefront/wavefront_debug.c:188:44: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 5 has type ‘uint64_t’ {aka ‘long long unsigned int’} [-Wformat=] 188 | fprintf(stream," Memory.mode=(%d,%luMB,%luMB,%luMB)\n", | ~~^ | | | long unsigned int | %llu /build/libwfa2-2.3.3/wavefront/wavefront_debug.c:188:50: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 6 has type ‘uint64_t’ {aka ‘long long unsigned int’} [-Wformat=] 188 | fprintf(stream," Memory.mode=(%d,%luMB,%luMB,%luMB)\n", | ~~^ | | | long unsigned int | %llu /build/libwfa2-2.3.3/wavefront/wavefront_debug.c: In function ‘wavefront_report_verbose_end’: /build/libwfa2-2.3.3/wavefront/wavefront_debug.c:201:34: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 3 has type ‘uint64_t’ {aka ‘long long unsigned int’} [-Wformat=] 201 | fprintf(stream," Memory.used=%luMB", | ~~^ | | | long unsigned int | %llu [ 46%] Building C object CMakeFiles/wfa2_static.dir/wavefront/wavefront_pcigar.c.o /usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2_static.dir/wavefront/wavefront_pcigar.c.o -MF CMakeFiles/wfa2_static.dir/wavefront/wavefront_pcigar.c.o.d -o CMakeFiles/wfa2_static.dir/wavefront/wavefront_pcigar.c.o -c /build/libwfa2-2.3.3/wavefront/wavefront_pcigar.c [ 47%] Building C object CMakeFiles/wfa2_static.dir/wavefront/wavefront_penalties.c.o /usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2_static.dir/wavefront/wavefront_penalties.c.o -MF CMakeFiles/wfa2_static.dir/wavefront/wavefront_penalties.c.o.d -o CMakeFiles/wfa2_static.dir/wavefront/wavefront_penalties.c.o -c /build/libwfa2-2.3.3/wavefront/wavefront_penalties.c [ 48%] Building C object CMakeFiles/wfa2.dir/wavefront/wavefront_pcigar.c.o /usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -Dwfa2_EXPORTS -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2.dir/wavefront/wavefront_pcigar.c.o -MF CMakeFiles/wfa2.dir/wavefront/wavefront_pcigar.c.o.d -o CMakeFiles/wfa2.dir/wavefront/wavefront_pcigar.c.o -c /build/libwfa2-2.3.3/wavefront/wavefront_pcigar.c [ 50%] Building C object CMakeFiles/wfa2_static.dir/wavefront/wavefront_plot.c.o /usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2_static.dir/wavefront/wavefront_plot.c.o -MF CMakeFiles/wfa2_static.dir/wavefront/wavefront_plot.c.o.d -o CMakeFiles/wfa2_static.dir/wavefront/wavefront_plot.c.o -c /build/libwfa2-2.3.3/wavefront/wavefront_plot.c [ 51%] Building C object CMakeFiles/wfa2.dir/wavefront/wavefront_penalties.c.o /usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -Dwfa2_EXPORTS -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2.dir/wavefront/wavefront_penalties.c.o -MF CMakeFiles/wfa2.dir/wavefront/wavefront_penalties.c.o.d -o CMakeFiles/wfa2.dir/wavefront/wavefront_penalties.c.o -c /build/libwfa2-2.3.3/wavefront/wavefront_penalties.c [ 52%] Building C object CMakeFiles/wfa2_static.dir/wavefront/wavefront_slab.c.o [ 53%] Building C object CMakeFiles/wfa2.dir/wavefront/wavefront_plot.c.o /usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2_static.dir/wavefront/wavefront_slab.c.o -MF CMakeFiles/wfa2_static.dir/wavefront/wavefront_slab.c.o.d -o CMakeFiles/wfa2_static.dir/wavefront/wavefront_slab.c.o -c /build/libwfa2-2.3.3/wavefront/wavefront_slab.c /usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -Dwfa2_EXPORTS -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2.dir/wavefront/wavefront_plot.c.o -MF CMakeFiles/wfa2.dir/wavefront/wavefront_plot.c.o.d -o CMakeFiles/wfa2.dir/wavefront/wavefront_plot.c.o -c /build/libwfa2-2.3.3/wavefront/wavefront_plot.c [ 54%] Building C object CMakeFiles/wfa2_static.dir/wavefront/wavefront_unialign.c.o /usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2_static.dir/wavefront/wavefront_unialign.c.o -MF CMakeFiles/wfa2_static.dir/wavefront/wavefront_unialign.c.o.d -o CMakeFiles/wfa2_static.dir/wavefront/wavefront_unialign.c.o -c /build/libwfa2-2.3.3/wavefront/wavefront_unialign.c [ 55%] Building C object CMakeFiles/wfa2.dir/wavefront/wavefront_slab.c.o /usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -Dwfa2_EXPORTS -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2.dir/wavefront/wavefront_slab.c.o -MF CMakeFiles/wfa2.dir/wavefront/wavefront_slab.c.o.d -o CMakeFiles/wfa2.dir/wavefront/wavefront_slab.c.o -c /build/libwfa2-2.3.3/wavefront/wavefront_slab.c [ 57%] Building C object CMakeFiles/wfa2_static.dir/system/mm_stack.c.o /usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2_static.dir/system/mm_stack.c.o -MF CMakeFiles/wfa2_static.dir/system/mm_stack.c.o.d -o CMakeFiles/wfa2_static.dir/system/mm_stack.c.o -c /build/libwfa2-2.3.3/system/mm_stack.c [ 58%] Building C object CMakeFiles/wfa2.dir/wavefront/wavefront_unialign.c.o /usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -Dwfa2_EXPORTS -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2.dir/wavefront/wavefront_unialign.c.o -MF CMakeFiles/wfa2.dir/wavefront/wavefront_unialign.c.o.d -o CMakeFiles/wfa2.dir/wavefront/wavefront_unialign.c.o -c /build/libwfa2-2.3.3/wavefront/wavefront_unialign.c /build/libwfa2-2.3.3/wavefront/wavefront_unialign.c: In function ‘wavefront_unialign_print_status’: /build/libwfa2-2.3.3/wavefront/wavefront_unialign.c:485:7: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 7 has type ‘uint64_t’ {aka ‘long long unsigned int’} [-Wformat=] 485 | "] SequenceLength=(%d,%d) Score %d (~ %2.3f%% aligned). " | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/libwfa2-2.3.3/wavefront/wavefront_unialign.c:486:41: note: format string is defined here 486 | "MemoryUsed(WF-Slab,BT-buffer)=(%lu MB,%lu MB). " | ~~^ | | | long unsigned int | %llu /build/libwfa2-2.3.3/wavefront/wavefront_unialign.c:485:7: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 8 has type ‘uint64_t’ {aka ‘long long unsigned int’} [-Wformat=] 485 | "] SequenceLength=(%d,%d) Score %d (~ %2.3f%% aligned). " | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/libwfa2-2.3.3/wavefront/wavefront_unialign.c:486:48: note: format string is defined here 486 | "MemoryUsed(WF-Slab,BT-buffer)=(%lu MB,%lu MB). " | ~~^ | | | long unsigned int | %llu [ 59%] Building C object CMakeFiles/wfa2.dir/system/mm_stack.c.o /usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -Dwfa2_EXPORTS -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2.dir/system/mm_stack.c.o -MF CMakeFiles/wfa2.dir/system/mm_stack.c.o.d -o CMakeFiles/wfa2.dir/system/mm_stack.c.o -c /build/libwfa2-2.3.3/system/mm_stack.c [ 60%] Building C object CMakeFiles/wfa2_static.dir/system/mm_allocator.c.o /usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2_static.dir/system/mm_allocator.c.o -MF CMakeFiles/wfa2_static.dir/system/mm_allocator.c.o.d -o CMakeFiles/wfa2_static.dir/system/mm_allocator.c.o -c /build/libwfa2-2.3.3/system/mm_allocator.c [ 61%] Building C object CMakeFiles/wfa2_static.dir/system/profiler_counter.c.o /usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2_static.dir/system/profiler_counter.c.o -MF CMakeFiles/wfa2_static.dir/system/profiler_counter.c.o.d -o CMakeFiles/wfa2_static.dir/system/profiler_counter.c.o -c /build/libwfa2-2.3.3/system/profiler_counter.c /build/libwfa2-2.3.3/wavefront/wavefront_unialign.c: In function ‘wavefront_unialign_print_status’: /build/libwfa2-2.3.3/wavefront/wavefront_unialign.c:485:7: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 7 has type ‘uint64_t’ {aka ‘long long unsigned int’} [-Wformat=] 485 | "] SequenceLength=(%d,%d) Score %d (~ %2.3f%% aligned). " | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/libwfa2-2.3.3/wavefront/wavefront_unialign.c:486:41: note: format string is defined here 486 | "MemoryUsed(WF-Slab,BT-buffer)=(%lu MB,%lu MB). " | ~~^ | | | long unsigned int | %llu /build/libwfa2-2.3.3/wavefront/wavefront_unialign.c:485:7: warning: format ‘%lu’ expects argument of type ‘long unsigned int’, but argument 8 has type ‘uint64_t’ {aka ‘long long unsigned int’} [-Wformat=] 485 | "] SequenceLength=(%d,%d) Score %d (~ %2.3f%% aligned). " | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/libwfa2-2.3.3/wavefront/wavefront_unialign.c:486:48: note: format string is defined here 486 | "MemoryUsed(WF-Slab,BT-buffer)=(%lu MB,%lu MB). " | ~~^ | | | long unsigned int | %llu [ 63%] Building C object CMakeFiles/wfa2.dir/system/mm_allocator.c.o /usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -Dwfa2_EXPORTS -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2.dir/system/mm_allocator.c.o -MF CMakeFiles/wfa2.dir/system/mm_allocator.c.o.d -o CMakeFiles/wfa2.dir/system/mm_allocator.c.o -c /build/libwfa2-2.3.3/system/mm_allocator.c [ 64%] Building C object CMakeFiles/wfa2_static.dir/system/profiler_timer.c.o /usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT 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-I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2_static.dir/utils/bitmap.c.o -MF CMakeFiles/wfa2_static.dir/utils/bitmap.c.o.d -o CMakeFiles/wfa2_static.dir/utils/bitmap.c.o -c /build/libwfa2-2.3.3/utils/bitmap.c [ 67%] Building C object CMakeFiles/wfa2.dir/system/profiler_timer.c.o /usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -Dwfa2_EXPORTS -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2.dir/system/profiler_timer.c.o -MF CMakeFiles/wfa2.dir/system/profiler_timer.c.o.d -o CMakeFiles/wfa2.dir/system/profiler_timer.c.o -c /build/libwfa2-2.3.3/system/profiler_timer.c [ 69%] Building C object CMakeFiles/wfa2.dir/utils/bitmap.c.o /usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -Dwfa2_EXPORTS -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2.dir/utils/bitmap.c.o -MF CMakeFiles/wfa2.dir/utils/bitmap.c.o.d -o CMakeFiles/wfa2.dir/utils/bitmap.c.o -c /build/libwfa2-2.3.3/utils/bitmap.c [ 70%] Building C object CMakeFiles/wfa2_static.dir/utils/dna_text.c.o /usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2_static.dir/utils/dna_text.c.o -MF CMakeFiles/wfa2_static.dir/utils/dna_text.c.o.d -o CMakeFiles/wfa2_static.dir/utils/dna_text.c.o -c /build/libwfa2-2.3.3/utils/dna_text.c [ 71%] Building C object CMakeFiles/wfa2_static.dir/utils/sequence_buffer.c.o [ 72%] Building C object CMakeFiles/wfa2_static.dir/utils/vector.c.o /usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2_static.dir/utils/vector.c.o -MF CMakeFiles/wfa2_static.dir/utils/vector.c.o.d -o CMakeFiles/wfa2_static.dir/utils/vector.c.o -c /build/libwfa2-2.3.3/utils/vector.c /usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2_static.dir/utils/sequence_buffer.c.o -MF CMakeFiles/wfa2_static.dir/utils/sequence_buffer.c.o.d -o CMakeFiles/wfa2_static.dir/utils/sequence_buffer.c.o -c /build/libwfa2-2.3.3/utils/sequence_buffer.c [ 73%] Building C object CMakeFiles/wfa2_static.dir/utils/commons.c.o /usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2_static.dir/utils/commons.c.o -MF CMakeFiles/wfa2_static.dir/utils/commons.c.o.d -o CMakeFiles/wfa2_static.dir/utils/commons.c.o -c /build/libwfa2-2.3.3/utils/commons.c [ 75%] Building C object CMakeFiles/wfa2.dir/utils/dna_text.c.o /usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -Dwfa2_EXPORTS -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2.dir/utils/dna_text.c.o -MF CMakeFiles/wfa2.dir/utils/dna_text.c.o.d -o CMakeFiles/wfa2.dir/utils/dna_text.c.o -c /build/libwfa2-2.3.3/utils/dna_text.c [ 76%] Building C object CMakeFiles/wfa2_static.dir/utils/heatmap.c.o /usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2_static.dir/utils/heatmap.c.o -MF CMakeFiles/wfa2_static.dir/utils/heatmap.c.o.d -o CMakeFiles/wfa2_static.dir/utils/heatmap.c.o -c /build/libwfa2-2.3.3/utils/heatmap.c [ 77%] Building C object CMakeFiles/wfa2.dir/utils/sequence_buffer.c.o /usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -Dwfa2_EXPORTS -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2.dir/utils/sequence_buffer.c.o -MF CMakeFiles/wfa2.dir/utils/sequence_buffer.c.o.d -o CMakeFiles/wfa2.dir/utils/sequence_buffer.c.o -c /build/libwfa2-2.3.3/utils/sequence_buffer.c [ 78%] Building C object CMakeFiles/wfa2.dir/utils/vector.c.o /usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -Dwfa2_EXPORTS -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2.dir/utils/vector.c.o -MF CMakeFiles/wfa2.dir/utils/vector.c.o.d -o CMakeFiles/wfa2.dir/utils/vector.c.o -c /build/libwfa2-2.3.3/utils/vector.c [ 79%] Building C object CMakeFiles/wfa2_static.dir/utils/string_padded.c.o /usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2_static.dir/utils/string_padded.c.o -MF CMakeFiles/wfa2_static.dir/utils/string_padded.c.o.d -o CMakeFiles/wfa2_static.dir/utils/string_padded.c.o -c /build/libwfa2-2.3.3/utils/string_padded.c [ 80%] Building C object CMakeFiles/wfa2.dir/utils/commons.c.o /usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -Dwfa2_EXPORTS -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2.dir/utils/commons.c.o -MF CMakeFiles/wfa2.dir/utils/commons.c.o.d -o CMakeFiles/wfa2.dir/utils/commons.c.o -c /build/libwfa2-2.3.3/utils/commons.c [ 82%] Building C object CMakeFiles/wfa2_static.dir/alignment/affine2p_penalties.c.o /usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2_static.dir/alignment/affine2p_penalties.c.o -MF CMakeFiles/wfa2_static.dir/alignment/affine2p_penalties.c.o.d -o CMakeFiles/wfa2_static.dir/alignment/affine2p_penalties.c.o -c /build/libwfa2-2.3.3/alignment/affine2p_penalties.c [ 83%] Building C object CMakeFiles/wfa2_static.dir/alignment/affine_penalties.c.o /usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 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/usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2_static.dir/alignment/cigar.c.o -MF CMakeFiles/wfa2_static.dir/alignment/cigar.c.o.d -o CMakeFiles/wfa2_static.dir/alignment/cigar.c.o -c /build/libwfa2-2.3.3/alignment/cigar.c [ 86%] Building C object CMakeFiles/wfa2_static.dir/alignment/score_matrix.c.o /usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2_static.dir/alignment/score_matrix.c.o -MF CMakeFiles/wfa2_static.dir/alignment/score_matrix.c.o.d -o CMakeFiles/wfa2_static.dir/alignment/score_matrix.c.o -c /build/libwfa2-2.3.3/alignment/score_matrix.c [ 88%] Building C object CMakeFiles/wfa2.dir/utils/string_padded.c.o /usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -Dwfa2_EXPORTS -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2.dir/utils/string_padded.c.o -MF CMakeFiles/wfa2.dir/utils/string_padded.c.o.d -o CMakeFiles/wfa2.dir/utils/string_padded.c.o -c /build/libwfa2-2.3.3/utils/string_padded.c [ 89%] Building C object CMakeFiles/wfa2.dir/alignment/affine2p_penalties.c.o /usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -Dwfa2_EXPORTS -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat 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CMakeFiles/wfa2.dir/alignment/cigar.c.o /usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -Dwfa2_EXPORTS -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2.dir/alignment/cigar.c.o -MF CMakeFiles/wfa2.dir/alignment/cigar.c.o.d -o CMakeFiles/wfa2.dir/alignment/cigar.c.o -c /build/libwfa2-2.3.3/alignment/cigar.c /usr/bin/cc -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -Dwfa2_EXPORTS -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -MD -MT CMakeFiles/wfa2.dir/alignment/score_matrix.c.o -MF CMakeFiles/wfa2.dir/alignment/score_matrix.c.o.d -o CMakeFiles/wfa2.dir/alignment/score_matrix.c.o -c /build/libwfa2-2.3.3/alignment/score_matrix.c [ 94%] Linking C static library libwfa2.a /usr/bin/cmake -P CMakeFiles/wfa2_static.dir/cmake_clean_target.cmake /usr/bin/cmake -E cmake_link_script CMakeFiles/wfa2_static.dir/link.txt --verbose=1 /usr/bin/ar qc libwfa2.a CMakeFiles/wfa2_static.dir/wavefront/wavefront_align.c.o CMakeFiles/wfa2_static.dir/wavefront/wavefront_aligner.c.o CMakeFiles/wfa2_static.dir/wavefront/wavefront_attributes.c.o CMakeFiles/wfa2_static.dir/wavefront/wavefront_backtrace_buffer.c.o CMakeFiles/wfa2_static.dir/wavefront/wavefront_backtrace.c.o CMakeFiles/wfa2_static.dir/wavefront/wavefront_backtrace_offload.c.o CMakeFiles/wfa2_static.dir/wavefront/wavefront_bialign.c.o CMakeFiles/wfa2_static.dir/wavefront/wavefront_bialigner.c.o CMakeFiles/wfa2_static.dir/wavefront/wavefront.c.o CMakeFiles/wfa2_static.dir/wavefront/wavefront_components.c.o CMakeFiles/wfa2_static.dir/wavefront/wavefront_compute_affine2p.c.o CMakeFiles/wfa2_static.dir/wavefront/wavefront_compute_affine.c.o CMakeFiles/wfa2_static.dir/wavefront/wavefront_compute.c.o CMakeFiles/wfa2_static.dir/wavefront/wavefront_compute_edit.c.o CMakeFiles/wfa2_static.dir/wavefront/wavefront_compute_linear.c.o CMakeFiles/wfa2_static.dir/wavefront/wavefront_debug.c.o CMakeFiles/wfa2_static.dir/wavefront/wavefront_display.c.o CMakeFiles/wfa2_static.dir/wavefront/wavefront_extend.c.o CMakeFiles/wfa2_static.dir/wavefront/wavefront_heuristic.c.o CMakeFiles/wfa2_static.dir/wavefront/wavefront_pcigar.c.o CMakeFiles/wfa2_static.dir/wavefront/wavefront_penalties.c.o CMakeFiles/wfa2_static.dir/wavefront/wavefront_plot.c.o CMakeFiles/wfa2_static.dir/wavefront/wavefront_slab.c.o CMakeFiles/wfa2_static.dir/wavefront/wavefront_unialign.c.o CMakeFiles/wfa2_static.dir/system/mm_stack.c.o CMakeFiles/wfa2_static.dir/system/mm_allocator.c.o CMakeFiles/wfa2_static.dir/system/profiler_counter.c.o CMakeFiles/wfa2_static.dir/system/profiler_timer.c.o CMakeFiles/wfa2_static.dir/utils/bitmap.c.o CMakeFiles/wfa2_static.dir/utils/dna_text.c.o CMakeFiles/wfa2_static.dir/utils/sequence_buffer.c.o CMakeFiles/wfa2_static.dir/utils/vector.c.o CMakeFiles/wfa2_static.dir/utils/commons.c.o CMakeFiles/wfa2_static.dir/utils/heatmap.c.o CMakeFiles/wfa2_static.dir/utils/string_padded.c.o CMakeFiles/wfa2_static.dir/alignment/affine2p_penalties.c.o CMakeFiles/wfa2_static.dir/alignment/affine_penalties.c.o CMakeFiles/wfa2_static.dir/alignment/cigar.c.o CMakeFiles/wfa2_static.dir/alignment/score_matrix.c.o /usr/bin/ranlib libwfa2.a make[3]: Leaving directory '/build/libwfa2-2.3.3/obj-i686-linux-gnu' [ 94%] Built target wfa2_static [ 95%] Linking C shared library libwfa2.so /usr/bin/cmake -E cmake_link_script CMakeFiles/wfa2.dir/link.txt --verbose=1 /usr/bin/cc -fPIC -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libwfa2.so.0 -o libwfa2.so.0 CMakeFiles/wfa2.dir/wavefront/wavefront_align.c.o CMakeFiles/wfa2.dir/wavefront/wavefront_aligner.c.o CMakeFiles/wfa2.dir/wavefront/wavefront_attributes.c.o CMakeFiles/wfa2.dir/wavefront/wavefront_backtrace_buffer.c.o CMakeFiles/wfa2.dir/wavefront/wavefront_backtrace.c.o CMakeFiles/wfa2.dir/wavefront/wavefront_backtrace_offload.c.o CMakeFiles/wfa2.dir/wavefront/wavefront_bialign.c.o CMakeFiles/wfa2.dir/wavefront/wavefront_bialigner.c.o CMakeFiles/wfa2.dir/wavefront/wavefront.c.o CMakeFiles/wfa2.dir/wavefront/wavefront_components.c.o CMakeFiles/wfa2.dir/wavefront/wavefront_compute_affine2p.c.o CMakeFiles/wfa2.dir/wavefront/wavefront_compute_affine.c.o CMakeFiles/wfa2.dir/wavefront/wavefront_compute.c.o CMakeFiles/wfa2.dir/wavefront/wavefront_compute_edit.c.o CMakeFiles/wfa2.dir/wavefront/wavefront_compute_linear.c.o CMakeFiles/wfa2.dir/wavefront/wavefront_debug.c.o CMakeFiles/wfa2.dir/wavefront/wavefront_display.c.o CMakeFiles/wfa2.dir/wavefront/wavefront_extend.c.o CMakeFiles/wfa2.dir/wavefront/wavefront_heuristic.c.o CMakeFiles/wfa2.dir/wavefront/wavefront_pcigar.c.o CMakeFiles/wfa2.dir/wavefront/wavefront_penalties.c.o CMakeFiles/wfa2.dir/wavefront/wavefront_plot.c.o CMakeFiles/wfa2.dir/wavefront/wavefront_slab.c.o CMakeFiles/wfa2.dir/wavefront/wavefront_unialign.c.o CMakeFiles/wfa2.dir/system/mm_stack.c.o CMakeFiles/wfa2.dir/system/mm_allocator.c.o CMakeFiles/wfa2.dir/system/profiler_counter.c.o CMakeFiles/wfa2.dir/system/profiler_timer.c.o CMakeFiles/wfa2.dir/utils/bitmap.c.o CMakeFiles/wfa2.dir/utils/dna_text.c.o CMakeFiles/wfa2.dir/utils/sequence_buffer.c.o CMakeFiles/wfa2.dir/utils/vector.c.o CMakeFiles/wfa2.dir/utils/commons.c.o CMakeFiles/wfa2.dir/utils/heatmap.c.o CMakeFiles/wfa2.dir/utils/string_padded.c.o CMakeFiles/wfa2.dir/alignment/affine2p_penalties.c.o CMakeFiles/wfa2.dir/alignment/affine_penalties.c.o CMakeFiles/wfa2.dir/alignment/cigar.c.o CMakeFiles/wfa2.dir/alignment/score_matrix.c.o /usr/bin/cmake -E cmake_symlink_library libwfa2.so.0 libwfa2.so.0 libwfa2.so make[3]: Leaving directory '/build/libwfa2-2.3.3/obj-i686-linux-gnu' [ 95%] Built target wfa2 make -f CMakeFiles/wfa2cpp_static.dir/build.make CMakeFiles/wfa2cpp_static.dir/depend make -f CMakeFiles/wfa2cpp.dir/build.make CMakeFiles/wfa2cpp.dir/depend make[3]: Entering directory '/build/libwfa2-2.3.3/obj-i686-linux-gnu' cd /build/libwfa2-2.3.3/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libwfa2-2.3.3 /build/libwfa2-2.3.3 /build/libwfa2-2.3.3/obj-i686-linux-gnu /build/libwfa2-2.3.3/obj-i686-linux-gnu /build/libwfa2-2.3.3/obj-i686-linux-gnu/CMakeFiles/wfa2cpp_static.dir/DependInfo.cmake --color= make[3]: Entering directory '/build/libwfa2-2.3.3/obj-i686-linux-gnu' cd /build/libwfa2-2.3.3/obj-i686-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /build/libwfa2-2.3.3 /build/libwfa2-2.3.3 /build/libwfa2-2.3.3/obj-i686-linux-gnu /build/libwfa2-2.3.3/obj-i686-linux-gnu /build/libwfa2-2.3.3/obj-i686-linux-gnu/CMakeFiles/wfa2cpp.dir/DependInfo.cmake --color= make[3]: Leaving directory '/build/libwfa2-2.3.3/obj-i686-linux-gnu' make[3]: Leaving directory '/build/libwfa2-2.3.3/obj-i686-linux-gnu' make -f CMakeFiles/wfa2cpp_static.dir/build.make CMakeFiles/wfa2cpp_static.dir/build make -f CMakeFiles/wfa2cpp.dir/build.make CMakeFiles/wfa2cpp.dir/build make[3]: Entering directory '/build/libwfa2-2.3.3/obj-i686-linux-gnu' make[3]: Entering directory '/build/libwfa2-2.3.3/obj-i686-linux-gnu' [ 96%] Building CXX object CMakeFiles/wfa2cpp.dir/bindings/cpp/WFAligner.cpp.o [ 97%] Building CXX object CMakeFiles/wfa2cpp_static.dir/bindings/cpp/WFAligner.cpp.o /usr/bin/c++ -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -Dwfa2cpp_EXPORTS -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=gnu++17 -MD -MT CMakeFiles/wfa2cpp.dir/bindings/cpp/WFAligner.cpp.o -MF CMakeFiles/wfa2cpp.dir/bindings/cpp/WFAligner.cpp.o.d -o CMakeFiles/wfa2cpp.dir/bindings/cpp/WFAligner.cpp.o -c /build/libwfa2-2.3.3/bindings/cpp/WFAligner.cpp /usr/bin/c++ -DVERSION=\"v2.3\" -DWFA2LIB_VERSION=\"v2.3\" -I/build/libwfa2-2.3.3/. -I/build/libwfa2-2.3.3/wavefront -I/build/libwfa2-2.3.3/utils -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -std=gnu++17 -MD -MT CMakeFiles/wfa2cpp_static.dir/bindings/cpp/WFAligner.cpp.o -MF CMakeFiles/wfa2cpp_static.dir/bindings/cpp/WFAligner.cpp.o.d -o CMakeFiles/wfa2cpp_static.dir/bindings/cpp/WFAligner.cpp.o -c /build/libwfa2-2.3.3/bindings/cpp/WFAligner.cpp [ 98%] Linking CXX static library libwfa2cpp.a /usr/bin/cmake -P CMakeFiles/wfa2cpp_static.dir/cmake_clean_target.cmake /usr/bin/cmake -E cmake_link_script CMakeFiles/wfa2cpp_static.dir/link.txt --verbose=1 [100%] Linking CXX shared library libwfa2cpp.so /usr/bin/cmake -E cmake_link_script CMakeFiles/wfa2cpp.dir/link.txt --verbose=1 /usr/bin/ar qc libwfa2cpp.a CMakeFiles/wfa2cpp_static.dir/bindings/cpp/WFAligner.cpp.o /usr/bin/ranlib libwfa2cpp.a /usr/bin/c++ -fPIC -g -O2 -ffile-prefix-map=/build/libwfa2-2.3.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libwfa2cpp.so.0 -o libwfa2cpp.so.0 CMakeFiles/wfa2cpp.dir/bindings/cpp/WFAligner.cpp.o -Wl,-rpath,/build/libwfa2-2.3.3/obj-i686-linux-gnu: libwfa2.so.0 make[3]: Leaving directory '/build/libwfa2-2.3.3/obj-i686-linux-gnu' [100%] Built target wfa2cpp_static /usr/bin/cmake -E cmake_symlink_library libwfa2cpp.so.0 libwfa2cpp.so.0 libwfa2cpp.so make[3]: Leaving directory '/build/libwfa2-2.3.3/obj-i686-linux-gnu' [100%] Built target wfa2cpp make[2]: Leaving directory '/build/libwfa2-2.3.3/obj-i686-linux-gnu' /usr/bin/cmake -E cmake_progress_start /build/libwfa2-2.3.3/obj-i686-linux-gnu/CMakeFiles 0 make[1]: Leaving directory '/build/libwfa2-2.3.3/obj-i686-linux-gnu' dh_auto_test -O--buildsystem=cmake cd obj-i686-linux-gnu && make -j8 test ARGS\+=--verbose ARGS\+=-j8 make[1]: Entering directory '/build/libwfa2-2.3.3/obj-i686-linux-gnu' Running tests... /usr/bin/ctest --force-new-ctest-process --verbose -j8 UpdateCTestConfiguration from :/build/libwfa2-2.3.3/obj-i686-linux-gnu/DartConfiguration.tcl UpdateCTestConfiguration from :/build/libwfa2-2.3.3/obj-i686-linux-gnu/DartConfiguration.tcl Test project /build/libwfa2-2.3.3/obj-i686-linux-gnu Constructing a list of tests Done constructing a list of tests Updating test list for fixtures Added 0 tests to meet fixture requirements Checking test dependency graph... Checking test dependency graph end test 1 Start 1: wfa2lib 1: Test command: /build/libwfa2-2.3.3/tests/wfa.utest.sh 1: Working Directory: /build/libwfa2-2.3.3 1: Test timeout computed to be: 10000000 1: + BIN=./bin/align_benchmark 1: + INPUT=./tests/wfa.utest.seq 1: + OUTPUT=./tests 1: + LOG=./tests/wfa.utest.log 1: + rm './tests/*.alg' './tests/*.log*' 1: rm: cannot remove './tests/*.alg': No such file or directory 1: rm: cannot remove './tests/*.log*': No such file or directory 1: + for opt in "--check=correct","test" "--wfa-score-only","test.score" "--wfa-memory-mode=med --check=correct","test.pb" "--wfa-memory-mode=ultralow --check=correct","test.biwfa" "--wfa-memory-mode=ultralow --wfa-score-only","test.biwfa.score" 1: + IFS=, 1: + set -- --check=correct test 1: + IFS=' ' 1: + MODE=--check=correct 1: + PREFIX=test 1: + echo '>>> Testing '\''test'\'' (--check=correct)' 1: >>> Testing 'test' (--check=correct) 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.indel.alg -a indel-wfa --check=correct 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.edit.alg -a edit-wfa --check=correct 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.affine.alg -a gap-affine-wfa --check=correct 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.affine2p.alg -a gap-affine2p-wfa --check=correct 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.affine.p0.alg -a gap-affine-wfa --check=correct --affine-penalties=0,1,2,1 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.affine.p1.alg -a gap-affine-wfa --check=correct --affine-penalties=0,3,1,4 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.affine.p2.alg -a gap-affine-wfa --check=correct --affine-penalties=0,5,3,2 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.affine.p3.alg -a gap-affine-wfa --check=correct --affine-penalties=-5,1,2,1 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.affine.p4.alg -a gap-affine-wfa --check=correct --affine-penalties=-2,3,1,4 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.affine.p5.alg -a gap-affine-wfa --check=correct --affine-penalties=-3,5,3,2 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.affine.wfapt0.alg -a gap-affine-wfa --check=correct --wfa-heuristic=wfa-adaptive --wfa-heuristic-parameters=10,50,1 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.affine.wfapt1.alg -a gap-affine-wfa --check=correct --wfa-heuristic=wfa-adaptive --wfa-heuristic-parameters=10,50,10 1: + for opt in "--check=correct","test" "--wfa-score-only","test.score" "--wfa-memory-mode=med --check=correct","test.pb" "--wfa-memory-mode=ultralow --check=correct","test.biwfa" "--wfa-memory-mode=ultralow --wfa-score-only","test.biwfa.score" 1: + IFS=, 1: + set -- --wfa-score-only test.score 1: + IFS=' ' 1: + MODE=--wfa-score-only 1: + PREFIX=test.score 1: + echo '>>> Testing '\''test.score'\'' (--wfa-score-only)' 1: >>> Testing 'test.score' (--wfa-score-only) 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.score.indel.alg -a indel-wfa --wfa-score-only 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.score.edit.alg -a edit-wfa --wfa-score-only 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.score.affine.alg -a gap-affine-wfa --wfa-score-only 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.score.affine2p.alg -a gap-affine2p-wfa --wfa-score-only 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.score.affine.p0.alg -a gap-affine-wfa --wfa-score-only --affine-penalties=0,1,2,1 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.score.affine.p1.alg -a gap-affine-wfa --wfa-score-only --affine-penalties=0,3,1,4 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.score.affine.p2.alg -a gap-affine-wfa --wfa-score-only --affine-penalties=0,5,3,2 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.score.affine.p3.alg -a gap-affine-wfa --wfa-score-only --affine-penalties=-5,1,2,1 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.score.affine.p4.alg -a gap-affine-wfa --wfa-score-only --affine-penalties=-2,3,1,4 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.score.affine.p5.alg -a gap-affine-wfa --wfa-score-only --affine-penalties=-3,5,3,2 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.score.affine.wfapt0.alg -a gap-affine-wfa --wfa-score-only --wfa-heuristic=wfa-adaptive --wfa-heuristic-parameters=10,50,1 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.score.affine.wfapt1.alg -a gap-affine-wfa --wfa-score-only --wfa-heuristic=wfa-adaptive --wfa-heuristic-parameters=10,50,10 1: + for opt in "--check=correct","test" "--wfa-score-only","test.score" "--wfa-memory-mode=med --check=correct","test.pb" "--wfa-memory-mode=ultralow --check=correct","test.biwfa" "--wfa-memory-mode=ultralow --wfa-score-only","test.biwfa.score" 1: + IFS=, 1: + set -- '--wfa-memory-mode=med --check=correct' test.pb 1: + IFS=' ' 1: + MODE='--wfa-memory-mode=med --check=correct' 1: + PREFIX=test.pb 1: + echo '>>> Testing '\''test.pb'\'' (--wfa-memory-mode=med --check=correct)' 1: >>> Testing 'test.pb' (--wfa-memory-mode=med --check=correct) 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.pb.indel.alg -a indel-wfa --wfa-memory-mode=med --check=correct 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.pb.edit.alg -a edit-wfa --wfa-memory-mode=med --check=correct 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.pb.affine.alg -a gap-affine-wfa --wfa-memory-mode=med --check=correct 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.pb.affine2p.alg -a gap-affine2p-wfa --wfa-memory-mode=med --check=correct 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.pb.affine.p0.alg -a gap-affine-wfa --wfa-memory-mode=med --check=correct --affine-penalties=0,1,2,1 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.pb.affine.p1.alg -a gap-affine-wfa --wfa-memory-mode=med --check=correct --affine-penalties=0,3,1,4 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.pb.affine.p2.alg -a gap-affine-wfa --wfa-memory-mode=med --check=correct --affine-penalties=0,5,3,2 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.pb.affine.p3.alg -a gap-affine-wfa --wfa-memory-mode=med --check=correct --affine-penalties=-5,1,2,1 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.pb.affine.p4.alg -a gap-affine-wfa --wfa-memory-mode=med --check=correct --affine-penalties=-2,3,1,4 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.pb.affine.p5.alg -a gap-affine-wfa --wfa-memory-mode=med --check=correct --affine-penalties=-3,5,3,2 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.pb.affine.wfapt0.alg -a gap-affine-wfa --wfa-memory-mode=med --check=correct --wfa-heuristic=wfa-adaptive --wfa-heuristic-parameters=10,50,1 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.pb.affine.wfapt1.alg -a gap-affine-wfa --wfa-memory-mode=med --check=correct --wfa-heuristic=wfa-adaptive --wfa-heuristic-parameters=10,50,10 1: + for opt in "--check=correct","test" "--wfa-score-only","test.score" "--wfa-memory-mode=med --check=correct","test.pb" "--wfa-memory-mode=ultralow --check=correct","test.biwfa" "--wfa-memory-mode=ultralow --wfa-score-only","test.biwfa.score" 1: + IFS=, 1: + set -- '--wfa-memory-mode=ultralow --check=correct' test.biwfa 1: + IFS=' ' 1: + MODE='--wfa-memory-mode=ultralow --check=correct' 1: + PREFIX=test.biwfa 1: + echo '>>> Testing '\''test.biwfa'\'' (--wfa-memory-mode=ultralow --check=correct)' 1: >>> Testing 'test.biwfa' (--wfa-memory-mode=ultralow --check=correct) 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.biwfa.indel.alg -a indel-wfa --wfa-memory-mode=ultralow --check=correct 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.biwfa.edit.alg -a edit-wfa --wfa-memory-mode=ultralow --check=correct 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.biwfa.affine.alg -a gap-affine-wfa --wfa-memory-mode=ultralow --check=correct 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.biwfa.affine2p.alg -a gap-affine2p-wfa --wfa-memory-mode=ultralow --check=correct 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.biwfa.affine.p0.alg -a gap-affine-wfa --wfa-memory-mode=ultralow --check=correct --affine-penalties=0,1,2,1 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.biwfa.affine.p1.alg -a gap-affine-wfa --wfa-memory-mode=ultralow --check=correct --affine-penalties=0,3,1,4 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.biwfa.affine.p2.alg -a gap-affine-wfa --wfa-memory-mode=ultralow --check=correct --affine-penalties=0,5,3,2 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.biwfa.affine.p3.alg -a gap-affine-wfa --wfa-memory-mode=ultralow --check=correct --affine-penalties=-5,1,2,1 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.biwfa.affine.p4.alg -a gap-affine-wfa --wfa-memory-mode=ultralow --check=correct --affine-penalties=-2,3,1,4 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.biwfa.affine.p5.alg -a gap-affine-wfa --wfa-memory-mode=ultralow --check=correct --affine-penalties=-3,5,3,2 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.biwfa.affine.wfapt0.alg -a gap-affine-wfa --wfa-memory-mode=ultralow --check=correct --wfa-heuristic=wfa-adaptive --wfa-heuristic-parameters=10,50,1 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.biwfa.affine.wfapt1.alg -a gap-affine-wfa --wfa-memory-mode=ultralow --check=correct --wfa-heuristic=wfa-adaptive --wfa-heuristic-parameters=10,50,10 1: + for opt in "--check=correct","test" "--wfa-score-only","test.score" "--wfa-memory-mode=med --check=correct","test.pb" "--wfa-memory-mode=ultralow --check=correct","test.biwfa" "--wfa-memory-mode=ultralow --wfa-score-only","test.biwfa.score" 1: + IFS=, 1: + set -- '--wfa-memory-mode=ultralow --wfa-score-only' test.biwfa.score 1: + IFS=' ' 1: + MODE='--wfa-memory-mode=ultralow --wfa-score-only' 1: + PREFIX=test.biwfa.score 1: + echo '>>> Testing '\''test.biwfa.score'\'' (--wfa-memory-mode=ultralow --wfa-score-only)' 1: >>> Testing 'test.biwfa.score' (--wfa-memory-mode=ultralow --wfa-score-only) 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.biwfa.score.indel.alg -a indel-wfa --wfa-memory-mode=ultralow --wfa-score-only 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.biwfa.score.edit.alg -a edit-wfa --wfa-memory-mode=ultralow --wfa-score-only 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.biwfa.score.affine.alg -a gap-affine-wfa --wfa-memory-mode=ultralow --wfa-score-only 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.biwfa.score.affine2p.alg -a gap-affine2p-wfa --wfa-memory-mode=ultralow --wfa-score-only 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.biwfa.score.affine.p0.alg -a gap-affine-wfa --wfa-memory-mode=ultralow --wfa-score-only --affine-penalties=0,1,2,1 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.biwfa.score.affine.p1.alg -a gap-affine-wfa --wfa-memory-mode=ultralow --wfa-score-only --affine-penalties=0,3,1,4 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.biwfa.score.affine.p2.alg -a gap-affine-wfa --wfa-memory-mode=ultralow --wfa-score-only --affine-penalties=0,5,3,2 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.biwfa.score.affine.p3.alg -a gap-affine-wfa --wfa-memory-mode=ultralow --wfa-score-only --affine-penalties=-5,1,2,1 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.biwfa.score.affine.p4.alg -a gap-affine-wfa --wfa-memory-mode=ultralow --wfa-score-only --affine-penalties=-2,3,1,4 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.biwfa.score.affine.p5.alg -a gap-affine-wfa --wfa-memory-mode=ultralow --wfa-score-only --affine-penalties=-3,5,3,2 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.biwfa.score.affine.wfapt0.alg -a gap-affine-wfa --wfa-memory-mode=ultralow --wfa-score-only --wfa-heuristic=wfa-adaptive --wfa-heuristic-parameters=10,50,1 1: + time -v ./bin/align_benchmark -i ./tests/wfa.utest.seq -o ./tests/test.biwfa.score.affine.wfapt1.alg -a gap-affine-wfa --wfa-memory-mode=ultralow --wfa-score-only --wfa-heuristic=wfa-adaptive --wfa-heuristic-parameters=10,50,10 1: + diff tests/wfa.utest.check/test.edit.alg tests/wfa.utest.check/test.pb.edit.alg 1: + diff tests/wfa.utest.check/test.indel.alg tests/wfa.utest.check/test.pb.indel.alg 1: + diff tests/wfa.utest.check/test.affine.alg tests/wfa.utest.check/test.pb.affine.alg 1: + diff tests/wfa.utest.check/test.affine2p.alg tests/wfa.utest.check/test.pb.affine2p.alg 1: + diff tests/wfa.utest.check/test.affine.p0.alg tests/wfa.utest.check/test.pb.affine.p0.alg 1: + diff tests/wfa.utest.check/test.affine.p1.alg tests/wfa.utest.check/test.pb.affine.p1.alg 1: + diff tests/wfa.utest.check/test.affine.p2.alg tests/wfa.utest.check/test.pb.affine.p2.alg 1: + diff tests/wfa.utest.check/test.affine.p3.alg tests/wfa.utest.check/test.pb.affine.p3.alg 1: + diff tests/wfa.utest.check/test.affine.p4.alg tests/wfa.utest.check/test.pb.affine.p4.alg 1: + diff tests/wfa.utest.check/test.affine.p5.alg tests/wfa.utest.check/test.pb.affine.p5.alg 1: + diff tests/wfa.utest.check/test.affine.wfapt0.alg tests/wfa.utest.check/test.pb.affine.wfapt0.alg 1: + diff tests/wfa.utest.check/test.affine.wfapt1.alg tests/wfa.utest.check/test.pb.affine.wfapt1.alg 1: + ./scripts/wfa.alg.cmp.score.sh tests/wfa.utest.check/test.edit.alg tests/wfa.utest.check/test.biwfa.edit.alg 1: + ./scripts/wfa.alg.cmp.score.sh tests/wfa.utest.check/test.indel.alg tests/wfa.utest.check/test.biwfa.indel.alg 1: + ./scripts/wfa.alg.cmp.score.sh tests/wfa.utest.check/test.affine.alg tests/wfa.utest.check/test.biwfa.affine.alg 1: + ./scripts/wfa.alg.cmp.score.sh tests/wfa.utest.check/test.affine2p.alg tests/wfa.utest.check/test.biwfa.affine2p.alg 1: + ./scripts/wfa.alg.cmp.score.sh tests/wfa.utest.check/test.affine.p0.alg tests/wfa.utest.check/test.biwfa.affine.p0.alg 1: + ./scripts/wfa.alg.cmp.score.sh tests/wfa.utest.check/test.affine.p1.alg tests/wfa.utest.check/test.biwfa.affine.p1.alg 1: + ./scripts/wfa.alg.cmp.score.sh tests/wfa.utest.check/test.affine.p2.alg tests/wfa.utest.check/test.biwfa.affine.p2.alg 1: + ./scripts/wfa.alg.cmp.score.sh tests/wfa.utest.check/test.affine.p3.alg tests/wfa.utest.check/test.biwfa.affine.p3.alg 1: + ./scripts/wfa.alg.cmp.score.sh tests/wfa.utest.check/test.affine.p4.alg tests/wfa.utest.check/test.biwfa.affine.p4.alg 1: + ./scripts/wfa.alg.cmp.score.sh tests/wfa.utest.check/test.affine.p5.alg tests/wfa.utest.check/test.biwfa.affine.p5.alg 1: + ./scripts/wfa.alg.cmp.score.sh tests/wfa.utest.check/test.affine.wfapt0.alg tests/wfa.utest.check/test.biwfa.affine.wfapt0.alg 1: + ./scripts/wfa.alg.cmp.score.sh tests/wfa.utest.check/test.affine.wfapt1.alg tests/wfa.utest.check/test.biwfa.affine.wfapt1.alg 1: + grep Alignments.Correct ./tests/wfa.utest.log 1: + grep Time.Alignment ./tests/wfa.utest.log 1: + awk '{if ($4 != "ms") print $3" "$4}' 1: + sort -n 1: + grep 'Maximum resident set size' ./tests/wfa.utest.log 1: + awk '{print $6}' 1: + sort -n 1: + echo -n '>>> Correct: ' 1: >>> Correct: + tail -n 4 ./tests/wfa.utest.log.time ./tests/wfa.utest.check/wfa.utest.log.time 1: ==> ./tests/wfa.utest.log.time <== 1: 1: ==> ./tests/wfa.utest.check/wfa.utest.log.time <== 1: 4.01 s 1: 5.01 s 1: 7.65 s 1: 13.33 s 1: + tail -n 4 ./tests/wfa.utest.log.mem ./tests/wfa.utest.check/wfa.utest.log.mem 1: ==> ./tests/wfa.utest.log.mem <== 1: 1: ==> ./tests/wfa.utest.check/wfa.utest.log.mem <== 1: 414740 1: 566220 1: 827568 1: 1783148 1: + ./tests/wfa.utest.cmp.sh ./tests ./tests/wfa.utest.check 1: > Comparing ./tests vs ./tests/wfa.utest.check 1: [UTest::*] ./tests/wfa.utest.check/*.alg doesn't exist. 1: + grep 'Exit status:' ./tests/wfa.utest.log 1: + sort 1: + uniq -c 1: + grep 'Command terminated by signal' ./tests/wfa.utest.log 1: + sort 1: + uniq -c 1: + cat ./tests/wfa.utest.log.correct 1: + awk '{print $5$6}' 1: + sort 1: + uniq -c 1/1 Test #1: wfa2lib .......................... Passed 0.16 sec 100% tests passed, 0 tests failed out of 1 Total Test time (real) = 0.16 sec make[1]: Leaving directory '/build/libwfa2-2.3.3/obj-i686-linux-gnu' create-stamp debian/debhelper-build-stamp dh_testroot -O--buildsystem=cmake dh_prep -O--buildsystem=cmake dh_auto_install -O--buildsystem=cmake cd obj-i686-linux-gnu && make -j8 install DESTDIR=/build/libwfa2-2.3.3/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[1]: Entering directory '/build/libwfa2-2.3.3/obj-i686-linux-gnu' /usr/bin/cmake -S/build/libwfa2-2.3.3 -B/build/libwfa2-2.3.3/obj-i686-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 make -f CMakeFiles/Makefile2 preinstall make[2]: Entering directory '/build/libwfa2-2.3.3/obj-i686-linux-gnu' make[2]: Nothing to be done for 'preinstall'. make[2]: Leaving directory '/build/libwfa2-2.3.3/obj-i686-linux-gnu' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "None" -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/lib/i386-linux-gnu/libwfa2.a -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/lib/i386-linux-gnu/libwfa2.so.0 -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/lib/i386-linux-gnu/libwfa2.so -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/include/wfa2lib/wavefront/wavefront.h -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/include/wfa2lib/wavefront/wavefront_align.h -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/include/wfa2lib/wavefront/wavefront_aligner.h -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/include/wfa2lib/wavefront/wavefront_attributes.h -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/include/wfa2lib/wavefront/wavefront_backtrace.h -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/include/wfa2lib/wavefront/wavefront_backtrace_buffer.h -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/include/wfa2lib/wavefront/wavefront_backtrace_offload.h -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/include/wfa2lib/wavefront/wavefront_bialign.h -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/include/wfa2lib/wavefront/wavefront_bialigner.h -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/include/wfa2lib/wavefront/wavefront_components.h -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/include/wfa2lib/wavefront/wavefront_compute.h -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/include/wfa2lib/wavefront/wavefront_compute_affine.h -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/include/wfa2lib/wavefront/wavefront_compute_affine2p.h -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/include/wfa2lib/wavefront/wavefront_compute_edit.h -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/include/wfa2lib/wavefront/wavefront_compute_linear.h -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/include/wfa2lib/wavefront/wavefront_debug.h -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/include/wfa2lib/wavefront/wavefront_display.h -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/include/wfa2lib/wavefront/wavefront_extend.h -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/include/wfa2lib/wavefront/wavefront_heuristic.h -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/include/wfa2lib/wavefront/wavefront_offset.h -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/include/wfa2lib/wavefront/wavefront_pcigar.h -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/include/wfa2lib/wavefront/wavefront_penalties.h -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/include/wfa2lib/wavefront/wavefront_plot.h -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/include/wfa2lib/wavefront/wavefront_slab.h -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/include/wfa2lib/wavefront/wavefront_unialign.h -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/include/wfa2lib/wavefront/wfa.h -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/include/wfa2lib/wavefront/wfa.hpp -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/include/wfa2lib/utils/bitmap.h -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/include/wfa2lib/utils/commons.h -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/include/wfa2lib/utils/dna_text.h -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/include/wfa2lib/utils/heatmap.h -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/include/wfa2lib/utils/sequence_buffer.h -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/include/wfa2lib/utils/string_padded.h -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/include/wfa2lib/utils/vector.h -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/include/wfa2lib/alignment/affine2p_penalties.h -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/include/wfa2lib/alignment/affine_penalties.h -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/include/wfa2lib/alignment/cigar.h -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/include/wfa2lib/alignment/linear_penalties.h -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/include/wfa2lib/alignment/score_matrix.h -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/include/wfa2lib/system/mm_allocator.h -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/include/wfa2lib/system/mm_stack.h -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/include/wfa2lib/system/profiler_counter.h -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/include/wfa2lib/system/profiler_timer.h -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/lib/i386-linux-gnu/libwfa2cpp.so.0 -- Set runtime path of "/build/libwfa2-2.3.3/debian/tmp/usr/lib/i386-linux-gnu/libwfa2cpp.so.0" to "" -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/lib/i386-linux-gnu/libwfa2cpp.so -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/lib/i386-linux-gnu/libwfa2cpp.a -- Installing: /build/libwfa2-2.3.3/debian/tmp/usr/include/wfa2lib/bindings/cpp/WFAligner.hpp make[1]: Leaving directory '/build/libwfa2-2.3.3/obj-i686-linux-gnu' debian/rules override_dh_install make[1]: Entering directory '/build/libwfa2-2.3.3' dh_install d-shlibmove --commit \ --multiarch \ --devunversioned \ --exclude-la \ --movedev debian/tmp/usr/include usr \ debian/tmp/usr/lib/*/*.so Library package automatic movement utility set -e install -d -m 755 debian/libwfa2-dev/usr/lib/i386-linux-gnu install -d -m 755 debian/libwfa2-0/usr/lib/i386-linux-gnu mv debian/tmp/usr/lib/i386-linux-gnu/libwfa2.a debian/libwfa2-dev/usr/lib/i386-linux-gnu mv debian/tmp/usr/lib/i386-linux-gnu/libwfa2.so debian/libwfa2-dev/usr/lib/i386-linux-gnu mv /build/libwfa2-2.3.3/debian/tmp/usr/lib/i386-linux-gnu/libwfa2.so.0 debian/libwfa2-0/usr/lib/i386-linux-gnu PKGDEV=libwfa2-dev PKGSHL=libwfa2-0 install -d -m 755 debian/libwfa2-dev/usr mv debian/tmp/usr/include debian/libwfa2-dev/usr make[1]: Leaving directory '/build/libwfa2-2.3.3' dh_installdocs -O--buildsystem=cmake dh_installchangelogs -O--buildsystem=cmake dh_installsystemduser -O--buildsystem=cmake dh_perl -O--buildsystem=cmake dh_link -O--buildsystem=cmake dh_strip_nondeterminism -O--buildsystem=cmake dh_compress -O--buildsystem=cmake dh_fixperms -O--buildsystem=cmake dh_missing -O--buildsystem=cmake dh_dwz -a -O--buildsystem=cmake dh_strip -a -O--buildsystem=cmake dh_makeshlibs -a -O--buildsystem=cmake dh_shlibdeps -a -O--buildsystem=cmake dpkg-shlibdeps: warning: symbol sqrt used by debian/libwfa2-0/usr/lib/i386-linux-gnu/libwfa2.so.0 found in none of the libraries dh_installdeb -O--buildsystem=cmake dh_gencontrol -O--buildsystem=cmake dpkg-gencontrol: warning: Depends field of package libwfa2-dev: substitution variable ${shlibs:Depends} used, but is not defined dh_md5sums -O--buildsystem=cmake dh_builddeb -O--buildsystem=cmake dpkg-deb: building package 'libwfa2-0' in '../libwfa2-0_2.3.3-1_i386.deb'. dpkg-deb: building package 'libwfa2-0-dbgsym' in '../libwfa2-0-dbgsym_2.3.3-1_i386.deb'. dpkg-deb: building package 'libwfa2-dev' in '../libwfa2-dev_2.3.3-1_i386.deb'. dpkg-genbuildinfo --build=binary -O../libwfa2_2.3.3-1_i386.buildinfo dpkg-genchanges --build=binary -O../libwfa2_2.3.3-1_i386.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: including full source code in upload I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/15159 and its subdirectories I: Current time: Thu Apr 20 03:26:22 -12 2023 I: pbuilder-time-stamp: 1682004382 Thu Apr 20 15:26:22 UTC 2023 I: 1st build successful. Starting 2nd build on remote node ionos6-i386.debian.net. Thu Apr 20 15:26:22 UTC 2023 I: Preparing to do remote build '2' on ionos6-i386.debian.net. Thu Apr 20 15:27:00 UTC 2023 I: Deleting $TMPDIR on ionos6-i386.debian.net. Thu Apr 20 15:27:00 UTC 2023 I: libwfa2_2.3.3-1_i386.changes: Format: 1.8 Date: Sun, 26 Feb 2023 17:31:54 +0100 Source: libwfa2 Binary: libwfa2-0 libwfa2-0-dbgsym libwfa2-dev Architecture: i386 Version: 2.3.3-1 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team Changed-By: Andreas Tille Description: libwfa2-0 - exact gap-affine algorithm (shared library) libwfa2-dev - exact gap-affine algorithm (development) Changes: libwfa2 (2.3.3-1) unstable; urgency=medium . * New upstream version * Add install scripts for libwfa2cpp Checksums-Sha1: 0cff5220c0d2a15cfef2b256257409c26130e856 164868 libwfa2-0-dbgsym_2.3.3-1_i386.deb 07b7413e63792cc6ca548feda525106e086ba757 66828 libwfa2-0_2.3.3-1_i386.deb 889bb34bd2ba9ae52ab2331efc5ddd0c855a7c8e 87088 libwfa2-dev_2.3.3-1_i386.deb 542f120703a41b16a7c12ced4018e963e75bd9d8 6430 libwfa2_2.3.3-1_i386.buildinfo Checksums-Sha256: 17be11f1a5a672e997aecc167e95ced87dc84cd17dbd6fe62cdd5360ce65349b 164868 libwfa2-0-dbgsym_2.3.3-1_i386.deb 385b89c48bdd09d4af9157a331403d62ac5d2e03c4c49b6c26270ceba275a628 66828 libwfa2-0_2.3.3-1_i386.deb 37dfeddf726ea5a3c04e6346f19822278e21a93df4ed12e33d148d0d96aaa000 87088 libwfa2-dev_2.3.3-1_i386.deb bd2bc11c021305c75ab83bf720e8259e5e60a6718bfab1f29b8a7fba3ffa149e 6430 libwfa2_2.3.3-1_i386.buildinfo Files: 78349b530115b863426b0ab7ae55ba3b 164868 debug optional libwfa2-0-dbgsym_2.3.3-1_i386.deb 718d086f79a741575b3b07ae9542b86a 66828 libs optional libwfa2-0_2.3.3-1_i386.deb 02c0bcc3ad2a57c63a162fe7c0ef4cec 87088 libdevel optional libwfa2-dev_2.3.3-1_i386.deb 0a638f9cb3f49de97b60ae91a3545f65 6430 science optional libwfa2_2.3.3-1_i386.buildinfo Thu Apr 20 15:27:22 UTC 2023 I: diffoscope 240 will be used to compare the two builds: # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.GdKvL0JY/libwfa2_2.3.3-1.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.GdKvL0JY/libwfa2_2.3.3-1.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.GdKvL0JY/libwfa2_2.3.3-1.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.GdKvL0JY/b1/libwfa2_2.3.3-1_i386.changes /srv/reproducible-results/rbuild-debian/r-b-build.GdKvL0JY/b2/libwfa2_2.3.3-1_i386.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 5.226s) 5.226s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.155s) 0.155s 12 calls diffoscope.comparators.binary.FilesystemFile 0.000s 10 calls abc.DotChangesFile ## specialize (total time: 0.000s) 0.000s 1 call specialize Thu Apr 20 15:27:29 UTC 2023 I: diffoscope 240 found no differences in the changes files, and a .buildinfo file also exists. Thu Apr 20 15:27:29 UTC 2023 I: libwfa2 from bookworm built successfully and reproducibly on i386. Thu Apr 20 15:27:30 UTC 2023 I: Submitting .buildinfo files to external archives: Thu Apr 20 15:27:30 UTC 2023 I: Submitting 8.0K b1/libwfa2_2.3.3-1_i386.buildinfo.asc Thu Apr 20 15:27:31 UTC 2023 I: Submitting 8.0K b2/libwfa2_2.3.3-1_i386.buildinfo.asc Thu Apr 20 15:27:32 UTC 2023 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Thu Apr 20 15:27:32 UTC 2023 I: Done submitting .buildinfo files. Thu Apr 20 15:27:32 UTC 2023 I: Removing signed libwfa2_2.3.3-1_i386.buildinfo.asc files: removed './b1/libwfa2_2.3.3-1_i386.buildinfo.asc' removed './b2/libwfa2_2.3.3-1_i386.buildinfo.asc'