Mon Jun 12 20:59:13 UTC 2023 I: starting to build cbflib/bookworm/i386 on jenkins on '2023-06-12 20:58' Mon Jun 12 20:59:13 UTC 2023 I: The jenkins build log is/was available at https://jenkins.debian.net/userContent/reproducible/debian/build_service/i386_9/946/console.log Mon Jun 12 20:59:13 UTC 2023 I: Downloading source for bookworm/cbflib=0.9.7+dfsg1-2 --2023-06-12 20:59:14-- http://cdn-fastly.deb.debian.org/debian/pool/main/c/cbflib/cbflib_0.9.7%2bdfsg1-2.dsc Connecting to 78.137.99.97:3128... connected. Proxy request sent, awaiting response... 200 OK Length: 2562 (2.5K) [text/prs.lines.tag] Saving to: ‘cbflib_0.9.7+dfsg1-2.dsc’ 0K .. 100% 215M=0s 2023-06-12 20:59:14 (215 MB/s) - ‘cbflib_0.9.7+dfsg1-2.dsc’ saved [2562/2562] Mon Jun 12 20:59:14 UTC 2023 I: cbflib_0.9.7+dfsg1-2.dsc -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 3.0 (quilt) Source: cbflib Binary: libcbf-dev, libcbf1, cbflib-bin, python3-pycbf, cbflib-doc Architecture: any all Version: 0.9.7+dfsg1-2 Maintainer: Debian PaN Maintainers Uploaders: Morten Kjeldgaard , Debian Science Maintainers , Teemu Ikonen , Picca Frédéric-Emmanuel , Homepage: http://www.bernstein-plus-sons.com/software/CBF/ Standards-Version: 4.6.0 Vcs-Browser: https://salsa.debian.org/science-team/cbflib Vcs-Git: https://salsa.debian.org/science-team/cbflib.git Build-Depends: debhelper-compat (= 13), dh-python, dh-sequence-python3, libhdf5-dev, pkg-config, python3-all-dev Package-List: cbflib-bin deb science optional arch=any cbflib-doc deb doc optional arch=all libcbf-dev deb libdevel optional arch=any libcbf1 deb libs optional arch=any python3-pycbf deb python optional arch=any Checksums-Sha1: 5e9ff347512cd1c7074684e524065cef6d16e18f 6012032 cbflib_0.9.7+dfsg1.orig.tar.xz 748b8cde361e710d3fb3e39b9691a89e24aaef64 25312 cbflib_0.9.7+dfsg1-2.debian.tar.xz Checksums-Sha256: fd58cfcbfce948c889b6448e9b3c12c06f4b3411c1072e966987dd79c16329cd 6012032 cbflib_0.9.7+dfsg1.orig.tar.xz 011d207b6221c8abb7e5510ce8046b684c2d10e6ed8db4d803e4f2797dbd43a5 25312 cbflib_0.9.7+dfsg1-2.debian.tar.xz Files: e570bec5c7d7890aeb57e7cb5d16e102 6012032 cbflib_0.9.7+dfsg1.orig.tar.xz 63bc71c0f07f39dbd92397e8f0fc90ef 25312 cbflib_0.9.7+dfsg1-2.debian.tar.xz Dgit: 2b6464c93db54663ff3c98493ecba9bdd5120207 debian archive/debian/0.9.7+dfsg1-2 https://git.dgit.debian.org/cbflib -----BEGIN PGP SIGNATURE----- iQJFBAEBCgAvFiEE2bRTt5m4gw2UXmoKW/VOXhK5ALsFAmLz5FERHHBpY2NhQGRl Ymlhbi5vcmcACgkQW/VOXhK5ALtLeRAAndZnnegqvffYbmW6KylSBJbvs2cyEN7l pgp+LR0N4bCs+PxKuX+xPsQFWs1YH9Z9iYq9IWyw9kbda8JkYZ6wyqAc910rpGcC LCSPfdHaig+0Ofo2KRS7rN6cWnw9yxSHRDxUq9O4SCgxRGCnOrztXw7XwgcL4tGx iOYh6Ij499eVe1z7bdAWkltw9u+vSUaAwAUHh1iwp0+LYYlu5cpZmkI6IHKmFlI9 Js8wZahHwRupHGChLlb+CTBgtsnQwPdQbKmtSCi6BKufrZxKtKJNYIJIHSEfhbHv h9lG9hNVZOq3e4OOeAFN1fr58pP+U89ciAxElYrVhA8kTbCS3Pg6i0R4szzf8/oq mZ0f8JM5UBXgzXdFnBZ0Xy8kd7O6LKtOoApvrofD0YvPN/mtP5YVdptAYiAafaxr ZodT52GkMXxzaWm1iNO/9gBjKDiqfaRKkaeNpWbfU2GXWabAQQiz8oYOGtWBu/N/ JmLXKokiDC4H9UEx+NCYURIXGirOPEowCWk2raQwKSQnbA5ebNwcOwcfNTTQh2rP N4lBKZvdSFi6YFjAR7b91exzLYBuy5kfvZHe//LGIaAp02nfOMoCd7H3UP4tvbVk yZHHpmYpk39TYsRuOMbmEotxVKlR5VZBFY8fzxFiEblUBNhgnBdsLfjTuiQ6r2AS or9+EIDGThk= =MhgN -----END PGP SIGNATURE----- Mon Jun 12 20:59:14 UTC 2023 I: Checking whether the package is not for us Mon Jun 12 20:59:14 UTC 2023 I: Starting 1st build on remote node ionos2-i386.debian.net. Mon Jun 12 20:59:14 UTC 2023 I: Preparing to do remote build '1' on ionos2-i386.debian.net. Mon Jun 12 21:08:17 UTC 2023 I: Deleting $TMPDIR on ionos2-i386.debian.net. I: pbuilder: network access will be disabled during build I: Current time: Mon Jun 12 08:59:16 -12 2023 I: pbuilder-time-stamp: 1686603556 I: Building the build Environment I: extracting base tarball [/var/cache/pbuilder/bookworm-reproducible-base.tgz] I: copying local configuration W: --override-config is not set; not updating apt.conf Read the manpage for details. I: mounting /proc filesystem I: mounting /sys filesystem I: creating /{dev,run}/shm I: mounting /dev/pts filesystem I: redirecting /dev/ptmx to /dev/pts/ptmx I: policy-rc.d already exists I: using eatmydata during job I: Copying source file I: copying [cbflib_0.9.7+dfsg1-2.dsc] I: copying [./cbflib_0.9.7+dfsg1.orig.tar.xz] I: copying [./cbflib_0.9.7+dfsg1-2.debian.tar.xz] I: Extracting source gpgv: Signature made Wed Aug 10 05:01:05 2022 -12 gpgv: using RSA key D9B453B799B8830D945E6A0A5BF54E5E12B900BB gpgv: issuer "picca@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: cannot verify inline signature for ./cbflib_0.9.7+dfsg1-2.dsc: no acceptable signature found dpkg-source: info: extracting cbflib in cbflib-0.9.7+dfsg1 dpkg-source: info: unpacking cbflib_0.9.7+dfsg1.orig.tar.xz dpkg-source: info: unpacking cbflib_0.9.7+dfsg1-2.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying 0001-makefile-fix-Get-system-HDF5-config-from-pkg-config.patch dpkg-source: info: applying 0002-makefile-fix-Fix-CBFLIB_DONT_USE_LOCAL_TIFF-config-v.patch dpkg-source: info: applying 0003-makefile-fix-Allow-disabling-PyCBF-from-env-with-NOP.patch dpkg-source: info: applying 0004-makefile-fix-Install-libs-to-CBF_PREFIX-INSTALL_LIB.patch dpkg-source: info: applying 0005-makefile-fix-Install-lib-to-SOVERSION-and-add-symlin.patch dpkg-source: info: applying 0006-makefile-fix-Allow-disabling-libimg-and-libfcb-build.patch dpkg-source: info: applying 0007-makefile-fix-Do-not-link-example-progs-w.-libimg.patch dpkg-source: info: applying 0008-makefile-fix-Add-SONAME-to-linker-flags.patch dpkg-source: info: applying 0009-makefile-fix-Pick-up-CFLAGS-and-LDFLAGS-from-the-env.patch dpkg-source: info: applying 0010-makefile-fix-Prepend-CPPFLAGS-value-to-CFLAGS.patch dpkg-source: info: applying 0011-makefile-fix-Add-LDFLAGS-to-SOLDFLAGS-to-pick-up-har.patch dpkg-source: info: applying 0013-makefile-deb-Use-DESTDIR-usr-as-CBF_PREFIX.patch dpkg-source: info: applying 0014-makefile-deb-Do-not-build-tiff2cbf.patch dpkg-source: info: applying 0016-add-missing-LdFLAG-to-cbf_testxfelread.patch dpkg-source: info: applying 0017-Added-an-extra_compile_args-to-setup.py.patch dpkg-source: info: applying 0018-fix-the-FTBFS-with-missing-m4-Makefile.m4.patch dpkg-source: info: applying 0018-do-not-install-pycifrw-files.patch I: Not using root during the build. I: Installing the build-deps I: user script /srv/workspace/pbuilder/19863/tmp/hooks/D02_print_environment starting I: set BUILDDIR='/build' BUILDUSERGECOS='first user,first room,first work-phone,first home-phone,first other' BUILDUSERNAME='pbuilder1' BUILD_ARCH='i386' DEBIAN_FRONTEND='noninteractive' DEB_BUILD_OPTIONS='buildinfo=+all reproducible=+all parallel=8 ' DISTRIBUTION='bookworm' HOME='/root' HOST_ARCH='i386' IFS=' ' INVOCATION_ID='599b625df1894ce983d11ccc06e18743' LANG='C' LANGUAGE='en_US:en' LC_ALL='C' LD_LIBRARY_PATH='/usr/lib/libeatmydata' LD_PRELOAD='libeatmydata.so' MAIL='/var/mail/root' OPTIND='1' PATH='/usr/sbin:/usr/bin:/sbin:/bin:/usr/games' PBCURRENTCOMMANDLINEOPERATION='build' PBUILDER_OPERATION='build' PBUILDER_PKGDATADIR='/usr/share/pbuilder' PBUILDER_PKGLIBDIR='/usr/lib/pbuilder' PBUILDER_SYSCONFDIR='/etc' PPID='19863' PS1='# ' PS2='> ' PS4='+ ' PWD='/' SHELL='/bin/bash' SHLVL='2' SUDO_COMMAND='/usr/bin/timeout -k 18.1h 18h /usr/bin/ionice -c 3 /usr/bin/nice /usr/sbin/pbuilder --build --configfile /srv/reproducible-results/rbuild-debian/r-b-build.GPOBzfZj/pbuilderrc_B0oG --distribution bookworm --hookdir /etc/pbuilder/first-build-hooks --debbuildopts -b --basetgz /var/cache/pbuilder/bookworm-reproducible-base.tgz --buildresult /srv/reproducible-results/rbuild-debian/r-b-build.GPOBzfZj/b1 --logfile b1/build.log cbflib_0.9.7+dfsg1-2.dsc' SUDO_GID='112' SUDO_UID='107' SUDO_USER='jenkins' TERM='unknown' TZ='/usr/share/zoneinfo/Etc/GMT+12' USER='root' _='/usr/bin/systemd-run' http_proxy='http://78.137.99.97:3128' I: uname -a Linux ionos2-i386 6.1.0-9-686-pae #1 SMP PREEMPT_DYNAMIC Debian 6.1.27-1 (2023-05-08) i686 GNU/Linux I: ls -l /bin total 6036 -rwxr-xr-x 1 root root 1408088 Apr 23 09:24 bash -rwxr-xr-x 3 root root 38404 Sep 18 2022 bunzip2 -rwxr-xr-x 3 root root 38404 Sep 18 2022 bzcat lrwxrwxrwx 1 root root 6 Sep 18 2022 bzcmp -> bzdiff -rwxr-xr-x 1 root root 2225 Sep 18 2022 bzdiff lrwxrwxrwx 1 root root 6 Sep 18 2022 bzegrep -> bzgrep -rwxr-xr-x 1 root root 4893 Nov 27 2021 bzexe lrwxrwxrwx 1 root root 6 Sep 18 2022 bzfgrep -> bzgrep -rwxr-xr-x 1 root root 3775 Sep 18 2022 bzgrep -rwxr-xr-x 3 root root 38404 Sep 18 2022 bzip2 -rwxr-xr-x 1 root root 17892 Sep 18 2022 bzip2recover lrwxrwxrwx 1 root root 6 Sep 18 2022 bzless -> bzmore -rwxr-xr-x 1 root root 1297 Sep 18 2022 bzmore -rwxr-xr-x 1 root root 42920 Sep 20 2022 cat -rwxr-xr-x 1 root root 79816 Sep 20 2022 chgrp -rwxr-xr-x 1 root root 67496 Sep 20 2022 chmod -rwxr-xr-x 1 root root 79816 Sep 20 2022 chown -rwxr-xr-x 1 root root 162024 Sep 20 2022 cp -rwxr-xr-x 1 root root 136916 Jan 5 01:20 dash -rwxr-xr-x 1 root root 137160 Sep 20 2022 date -rwxr-xr-x 1 root root 100364 Sep 20 2022 dd -rwxr-xr-x 1 root root 108940 Sep 20 2022 df -rwxr-xr-x 1 root root 162152 Sep 20 2022 dir -rwxr-xr-x 1 root root 87760 Mar 22 22:20 dmesg lrwxrwxrwx 1 root root 8 Dec 19 01:33 dnsdomainname -> hostname lrwxrwxrwx 1 root root 8 Dec 19 01:33 domainname -> hostname -rwxr-xr-x 1 root root 38760 Sep 20 2022 echo -rwxr-xr-x 1 root root 41 Jan 24 02:43 egrep -rwxr-xr-x 1 root root 34664 Sep 20 2022 false -rwxr-xr-x 1 root root 41 Jan 24 02:43 fgrep -rwxr-xr-x 1 root root 84272 Mar 22 22:20 findmnt -rwsr-xr-x 1 root root 30240 Mar 22 20:38 fusermount -rwxr-xr-x 1 root root 218680 Jan 24 02:43 grep -rwxr-xr-x 2 root root 2346 Apr 9 2022 gunzip -rwxr-xr-x 1 root root 6447 Apr 9 2022 gzexe -rwxr-xr-x 1 root root 100952 Apr 9 2022 gzip -rwxr-xr-x 1 root root 21916 Dec 19 01:33 hostname -rwxr-xr-x 1 root root 75756 Sep 20 2022 ln -rwxr-xr-x 1 root root 55600 Mar 22 23:43 login -rwxr-xr-x 1 root root 162152 Sep 20 2022 ls -rwxr-xr-x 1 root root 214568 Mar 22 22:20 lsblk -rwxr-xr-x 1 root root 96328 Sep 20 2022 mkdir -rwxr-xr-x 1 root root 84008 Sep 20 2022 mknod -rwxr-xr-x 1 root root 38792 Sep 20 2022 mktemp -rwxr-xr-x 1 root root 63016 Mar 22 22:20 more -rwsr-xr-x 1 root root 58912 Mar 22 22:20 mount -rwxr-xr-x 1 root root 13856 Mar 22 22:20 mountpoint -rwxr-xr-x 1 root root 157932 Sep 20 2022 mv lrwxrwxrwx 1 root root 8 Dec 19 01:33 nisdomainname -> hostname lrwxrwxrwx 1 root root 14 Apr 2 18:25 pidof -> /sbin/killall5 -rwxr-xr-x 1 root root 38792 Sep 20 2022 pwd lrwxrwxrwx 1 root root 4 Apr 23 09:24 rbash -> bash -rwxr-xr-x 1 root root 51080 Sep 20 2022 readlink -rwxr-xr-x 1 root root 75720 Sep 20 2022 rm -rwxr-xr-x 1 root root 51080 Sep 20 2022 rmdir -rwxr-xr-x 1 root root 22308 Nov 2 2022 run-parts -rwxr-xr-x 1 root root 133224 Jan 5 07:55 sed lrwxrwxrwx 1 root root 4 Jan 5 01:20 sh -> dash -rwxr-xr-x 1 root root 38760 Sep 20 2022 sleep -rwxr-xr-x 1 root root 87976 Sep 20 2022 stty -rwsr-xr-x 1 root root 83492 Mar 22 22:20 su -rwxr-xr-x 1 root root 38792 Sep 20 2022 sync -rwxr-xr-x 1 root root 598456 Apr 6 02:25 tar -rwxr-xr-x 1 root root 13860 Nov 2 2022 tempfile -rwxr-xr-x 1 root root 120776 Sep 20 2022 touch -rwxr-xr-x 1 root root 34664 Sep 20 2022 true -rwxr-xr-x 1 root root 17892 Mar 22 20:38 ulockmgr_server -rwsr-xr-x 1 root root 30236 Mar 22 22:20 umount -rwxr-xr-x 1 root root 38760 Sep 20 2022 uname -rwxr-xr-x 2 root root 2346 Apr 9 2022 uncompress -rwxr-xr-x 1 root root 162152 Sep 20 2022 vdir -rwxr-xr-x 1 root root 71216 Mar 22 22:20 wdctl lrwxrwxrwx 1 root root 8 Dec 19 01:33 ypdomainname -> hostname -rwxr-xr-x 1 root root 1984 Apr 9 2022 zcat -rwxr-xr-x 1 root root 1678 Apr 9 2022 zcmp -rwxr-xr-x 1 root root 6460 Apr 9 2022 zdiff -rwxr-xr-x 1 root root 29 Apr 9 2022 zegrep -rwxr-xr-x 1 root root 29 Apr 9 2022 zfgrep -rwxr-xr-x 1 root root 2081 Apr 9 2022 zforce -rwxr-xr-x 1 root root 8103 Apr 9 2022 zgrep -rwxr-xr-x 1 root root 2206 Apr 9 2022 zless -rwxr-xr-x 1 root root 1842 Apr 9 2022 zmore -rwxr-xr-x 1 root root 4577 Apr 9 2022 znew I: user script /srv/workspace/pbuilder/19863/tmp/hooks/D02_print_environment finished -> Attempting to satisfy build-dependencies -> Creating pbuilder-satisfydepends-dummy package Package: pbuilder-satisfydepends-dummy Version: 0.invalid.0 Architecture: i386 Maintainer: Debian Pbuilder Team Description: Dummy package to satisfy dependencies with aptitude - created by pbuilder This package was created automatically by pbuilder to satisfy the build-dependencies of the package being currently built. Depends: debhelper-compat (= 13), dh-python, dh-sequence-python3, libhdf5-dev, pkg-config, python3-all-dev dpkg-deb: building package 'pbuilder-satisfydepends-dummy' in '/tmp/satisfydepends-aptitude/pbuilder-satisfydepends-dummy.deb'. Selecting previously unselected package pbuilder-satisfydepends-dummy. (Reading database ... 19599 files and directories currently installed.) Preparing to unpack .../pbuilder-satisfydepends-dummy.deb ... Unpacking pbuilder-satisfydepends-dummy (0.invalid.0) ... dpkg: pbuilder-satisfydepends-dummy: dependency problems, but configuring anyway as you requested: pbuilder-satisfydepends-dummy depends on debhelper-compat (= 13); however: Package debhelper-compat is not installed. pbuilder-satisfydepends-dummy depends on dh-python; however: Package dh-python is not installed. pbuilder-satisfydepends-dummy depends on dh-sequence-python3; however: Package dh-sequence-python3 is not installed. pbuilder-satisfydepends-dummy depends on libhdf5-dev; however: Package libhdf5-dev is not installed. pbuilder-satisfydepends-dummy depends on pkg-config; however: Package pkg-config is not installed. pbuilder-satisfydepends-dummy depends on python3-all-dev; however: Package python3-all-dev is not installed. Setting up pbuilder-satisfydepends-dummy (0.invalid.0) ... Reading package lists... Building dependency tree... Reading state information... Initializing package states... Writing extended state information... Building tag database... pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) pbuilder-satisfydepends-dummy is already installed at the requested version (0.invalid.0) The following NEW packages will be installed: autoconf{a} automake{a} autopoint{a} autotools-dev{a} bsdextrautils{a} debhelper{a} dh-autoreconf{a} dh-python{a} dh-strip-nondeterminism{a} dwz{a} file{a} gettext{a} gettext-base{a} groff-base{a} hdf5-helpers{a} intltool-debian{a} libaec-dev{a} libaec0{a} libarchive-zip-perl{a} libbrotli1{a} libcurl4{a} libcurl4-openssl-dev{a} libdebhelper-perl{a} libelf1{a} libexpat1{a} libexpat1-dev{a} libfile-stripnondeterminism-perl{a} libgfortran5{a} libhdf5-103-1{a} libhdf5-cpp-103-1{a} libhdf5-dev{a} libhdf5-fortran-102{a} libhdf5-hl-100{a} libhdf5-hl-cpp-100{a} libhdf5-hl-fortran-100{a} libicu72{a} libjpeg-dev{a} libjpeg62-turbo{a} libjpeg62-turbo-dev{a} libjs-jquery{a} libjs-sphinxdoc{a} libjs-underscore{a} libldap-2.5-0{a} libmagic-mgc{a} libmagic1{a} libnghttp2-14{a} libpipeline1{a} libpkgconf3{a} libpsl5{a} libpython3-all-dev{a} libpython3-dev{a} libpython3-stdlib{a} libpython3.11{a} libpython3.11-dev{a} libpython3.11-minimal{a} libpython3.11-stdlib{a} libreadline8{a} librtmp1{a} libsasl2-2{a} libsasl2-modules-db{a} libssh2-1{a} libssl-dev{a} libsub-override-perl{a} libsz2{a} libtool{a} libuchardet0{a} libxml2{a} m4{a} man-db{a} media-types{a} pkg-config{a} pkgconf{a} pkgconf-bin{a} po-debconf{a} python3{a} python3-all{a} python3-all-dev{a} python3-dev{a} python3-distutils{a} python3-lib2to3{a} python3-minimal{a} python3.11{a} python3.11-dev{a} python3.11-minimal{a} readline-common{a} sensible-utils{a} zlib1g-dev{a} The following packages are RECOMMENDED but will NOT be installed: ca-certificates curl javascript-common libarchive-cpio-perl libldap-common libltdl-dev libmail-sendmail-perl libsasl2-modules lynx publicsuffix wget 0 packages upgraded, 87 newly installed, 0 to remove and 0 not upgraded. Need to get 44.4 MB of archives. After unpacking 168 MB will be used. Writing extended state information... Get: 1 http://deb.debian.org/debian bookworm/main i386 libpython3.11-minimal i386 3.11.2-6 [813 kB] Get: 2 http://deb.debian.org/debian bookworm/main i386 libexpat1 i386 2.5.0-1 [103 kB] Get: 3 http://deb.debian.org/debian bookworm/main i386 python3.11-minimal i386 3.11.2-6 [2130 kB] Get: 4 http://deb.debian.org/debian bookworm/main i386 python3-minimal i386 3.11.2-1+b1 [26.3 kB] Get: 5 http://deb.debian.org/debian bookworm/main i386 media-types all 10.0.0 [26.1 kB] Get: 6 http://deb.debian.org/debian bookworm/main i386 readline-common all 8.2-1.3 [69.0 kB] Get: 7 http://deb.debian.org/debian bookworm/main i386 libreadline8 i386 8.2-1.3 [171 kB] Get: 8 http://deb.debian.org/debian bookworm/main i386 libpython3.11-stdlib i386 3.11.2-6 [1799 kB] Get: 9 http://deb.debian.org/debian bookworm/main i386 python3.11 i386 3.11.2-6 [572 kB] Get: 10 http://deb.debian.org/debian bookworm/main i386 libpython3-stdlib i386 3.11.2-1+b1 [9308 B] Get: 11 http://deb.debian.org/debian bookworm/main i386 python3 i386 3.11.2-1+b1 [26.3 kB] Get: 12 http://deb.debian.org/debian bookworm/main i386 sensible-utils all 0.0.17+nmu1 [19.0 kB] Get: 13 http://deb.debian.org/debian bookworm/main i386 libmagic-mgc i386 1:5.44-3 [305 kB] Get: 14 http://deb.debian.org/debian bookworm/main i386 libmagic1 i386 1:5.44-3 [114 kB] Get: 15 http://deb.debian.org/debian bookworm/main i386 file i386 1:5.44-3 [42.5 kB] Get: 16 http://deb.debian.org/debian bookworm/main i386 gettext-base i386 0.21-12 [162 kB] Get: 17 http://deb.debian.org/debian bookworm/main i386 libuchardet0 i386 0.0.7-1 [67.9 kB] Get: 18 http://deb.debian.org/debian bookworm/main i386 groff-base i386 1.22.4-10 [932 kB] Get: 19 http://deb.debian.org/debian bookworm/main i386 bsdextrautils i386 2.38.1-5+b1 [90.3 kB] Get: 20 http://deb.debian.org/debian bookworm/main i386 libpipeline1 i386 1.5.7-1 [40.0 kB] Get: 21 http://deb.debian.org/debian bookworm/main i386 man-db i386 2.11.2-2 [1397 kB] Get: 22 http://deb.debian.org/debian bookworm/main i386 m4 i386 1.4.19-3 [294 kB] Get: 23 http://deb.debian.org/debian bookworm/main i386 autoconf all 2.71-3 [332 kB] Get: 24 http://deb.debian.org/debian bookworm/main i386 autotools-dev all 20220109.1 [51.6 kB] Get: 25 http://deb.debian.org/debian bookworm/main i386 automake all 1:1.16.5-1.3 [823 kB] Get: 26 http://deb.debian.org/debian bookworm/main i386 autopoint all 0.21-12 [495 kB] Get: 27 http://deb.debian.org/debian bookworm/main i386 libdebhelper-perl all 13.11.4 [81.2 kB] Get: 28 http://deb.debian.org/debian bookworm/main i386 libtool all 2.4.7-5 [517 kB] Get: 29 http://deb.debian.org/debian bookworm/main i386 dh-autoreconf all 20 [17.1 kB] Get: 30 http://deb.debian.org/debian bookworm/main i386 libarchive-zip-perl all 1.68-1 [104 kB] Get: 31 http://deb.debian.org/debian bookworm/main i386 libsub-override-perl all 0.09-4 [9304 B] Get: 32 http://deb.debian.org/debian bookworm/main i386 libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB] Get: 33 http://deb.debian.org/debian bookworm/main i386 dh-strip-nondeterminism all 1.13.1-1 [8620 B] Get: 34 http://deb.debian.org/debian bookworm/main i386 libelf1 i386 0.188-2.1 [179 kB] Get: 35 http://deb.debian.org/debian bookworm/main i386 dwz i386 0.15-1 [118 kB] Get: 36 http://deb.debian.org/debian bookworm/main i386 libicu72 i386 72.1-3 [9541 kB] Get: 37 http://deb.debian.org/debian bookworm/main i386 libxml2 i386 2.9.14+dfsg-1.2 [720 kB] Get: 38 http://deb.debian.org/debian bookworm/main i386 gettext i386 0.21-12 [1311 kB] Get: 39 http://deb.debian.org/debian bookworm/main i386 intltool-debian all 0.35.0+20060710.6 [22.9 kB] Get: 40 http://deb.debian.org/debian bookworm/main i386 po-debconf all 1.0.21+nmu1 [248 kB] Get: 41 http://deb.debian.org/debian bookworm/main i386 debhelper all 13.11.4 [942 kB] Get: 42 http://deb.debian.org/debian bookworm/main i386 python3-lib2to3 all 3.11.2-3 [76.3 kB] Get: 43 http://deb.debian.org/debian bookworm/main i386 python3-distutils all 3.11.2-3 [131 kB] Get: 44 http://deb.debian.org/debian bookworm/main i386 dh-python all 5.20230130 [104 kB] Get: 45 http://deb.debian.org/debian bookworm/main i386 hdf5-helpers i386 1.10.8+repack1-1 [27.9 kB] Get: 46 http://deb.debian.org/debian bookworm/main i386 libaec0 i386 1.0.6-1+b1 [22.4 kB] Get: 47 http://deb.debian.org/debian bookworm/main i386 libsz2 i386 1.0.6-1+b1 [7884 B] Get: 48 http://deb.debian.org/debian bookworm/main i386 libaec-dev i386 1.0.6-1+b1 [21.5 kB] Get: 49 http://deb.debian.org/debian bookworm/main i386 libbrotli1 i386 1.0.9-2+b6 [275 kB] Get: 50 http://deb.debian.org/debian bookworm/main i386 libsasl2-modules-db i386 2.1.28+dfsg-10 [21.4 kB] Get: 51 http://deb.debian.org/debian bookworm/main i386 libsasl2-2 i386 2.1.28+dfsg-10 [62.7 kB] Get: 52 http://deb.debian.org/debian bookworm/main i386 libldap-2.5-0 i386 2.5.13+dfsg-5 [196 kB] Get: 53 http://deb.debian.org/debian bookworm/main i386 libnghttp2-14 i386 1.52.0-1 [79.8 kB] Get: 54 http://deb.debian.org/debian bookworm/main i386 libpsl5 i386 0.21.2-1 [59.3 kB] Get: 55 http://deb.debian.org/debian bookworm/main i386 librtmp1 i386 2.4+20151223.gitfa8646d.1-2+b2 [64.3 kB] Get: 56 http://deb.debian.org/debian bookworm/main i386 libssh2-1 i386 1.10.0-3+b1 [187 kB] Get: 57 http://deb.debian.org/debian bookworm/main i386 libcurl4 i386 7.88.1-10 [420 kB] Get: 58 http://deb.debian.org/debian bookworm/main i386 libcurl4-openssl-dev i386 7.88.1-10 [534 kB] Get: 59 http://deb.debian.org/debian bookworm/main i386 libexpat1-dev i386 2.5.0-1 [158 kB] Get: 60 http://deb.debian.org/debian bookworm/main i386 libgfortran5 i386 12.2.0-14 [698 kB] Get: 61 http://deb.debian.org/debian bookworm/main i386 libhdf5-103-1 i386 1.10.8+repack1-1 [1175 kB] Get: 62 http://deb.debian.org/debian bookworm/main i386 libhdf5-cpp-103-1 i386 1.10.8+repack1-1 [136 kB] Get: 63 http://deb.debian.org/debian bookworm/main i386 libhdf5-fortran-102 i386 1.10.8+repack1-1 [101 kB] Get: 64 http://deb.debian.org/debian bookworm/main i386 libhdf5-hl-100 i386 1.10.8+repack1-1 [79.3 kB] Get: 65 http://deb.debian.org/debian bookworm/main i386 libhdf5-hl-fortran-100 i386 1.10.8+repack1-1 [46.2 kB] Get: 66 http://deb.debian.org/debian bookworm/main i386 libhdf5-hl-cpp-100 i386 1.10.8+repack1-1 [26.0 kB] Get: 67 http://deb.debian.org/debian bookworm/main i386 zlib1g-dev i386 1:1.2.13.dfsg-1 [913 kB] Get: 68 http://deb.debian.org/debian bookworm/main i386 libjpeg62-turbo i386 1:2.1.5-2 [169 kB] Get: 69 http://deb.debian.org/debian bookworm/main i386 libjpeg62-turbo-dev i386 1:2.1.5-2 [304 kB] Get: 70 http://deb.debian.org/debian bookworm/main i386 libjpeg-dev i386 1:2.1.5-2 [71.8 kB] Get: 71 http://deb.debian.org/debian bookworm/main i386 libssl-dev i386 3.0.9-1 [2487 kB] Get: 72 http://deb.debian.org/debian bookworm/main i386 libhdf5-dev i386 1.10.8+repack1-1 [2754 kB] Get: 73 http://deb.debian.org/debian bookworm/main i386 libjs-jquery all 3.6.1+dfsg+~3.5.14-1 [326 kB] Get: 74 http://deb.debian.org/debian bookworm/main i386 libjs-underscore all 1.13.4~dfsg+~1.11.4-3 [116 kB] Get: 75 http://deb.debian.org/debian bookworm/main i386 libjs-sphinxdoc all 5.3.0-4 [130 kB] Get: 76 http://deb.debian.org/debian bookworm/main i386 libpkgconf3 i386 1.8.1-1 [38.3 kB] Get: 77 http://deb.debian.org/debian bookworm/main i386 libpython3.11 i386 3.11.2-6 [2013 kB] Get: 78 http://deb.debian.org/debian bookworm/main i386 libpython3.11-dev i386 3.11.2-6 [4906 kB] Get: 79 http://deb.debian.org/debian bookworm/main i386 libpython3-dev i386 3.11.2-1+b1 [9580 B] Get: 80 http://deb.debian.org/debian bookworm/main i386 libpython3-all-dev i386 3.11.2-1+b1 [1068 B] Get: 81 http://deb.debian.org/debian bookworm/main i386 pkgconf-bin i386 1.8.1-1 [29.8 kB] Get: 82 http://deb.debian.org/debian bookworm/main i386 pkgconf i386 1.8.1-1 [25.9 kB] Get: 83 http://deb.debian.org/debian bookworm/main i386 pkg-config i386 1.8.1-1 [13.7 kB] Get: 84 http://deb.debian.org/debian bookworm/main i386 python3-all i386 3.11.2-1+b1 [1056 B] Get: 85 http://deb.debian.org/debian bookworm/main i386 python3.11-dev i386 3.11.2-6 [615 kB] Get: 86 http://deb.debian.org/debian bookworm/main i386 python3-dev i386 3.11.2-1+b1 [26.2 kB] Get: 87 http://deb.debian.org/debian bookworm/main i386 python3-all-dev i386 3.11.2-1+b1 [1072 B] Fetched 44.4 MB in 2s (24.3 MB/s) debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libpython3.11-minimal:i386. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19599 files and directories currently installed.) Preparing to unpack .../libpython3.11-minimal_3.11.2-6_i386.deb ... Unpacking libpython3.11-minimal:i386 (3.11.2-6) ... Selecting previously unselected package libexpat1:i386. Preparing to unpack .../libexpat1_2.5.0-1_i386.deb ... Unpacking libexpat1:i386 (2.5.0-1) ... Selecting previously unselected package python3.11-minimal. Preparing to unpack .../python3.11-minimal_3.11.2-6_i386.deb ... Unpacking python3.11-minimal (3.11.2-6) ... Setting up libpython3.11-minimal:i386 (3.11.2-6) ... Setting up libexpat1:i386 (2.5.0-1) ... Setting up python3.11-minimal (3.11.2-6) ... Selecting previously unselected package python3-minimal. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 19915 files and directories currently installed.) Preparing to unpack .../0-python3-minimal_3.11.2-1+b1_i386.deb ... Unpacking python3-minimal (3.11.2-1+b1) ... Selecting previously unselected package media-types. Preparing to unpack .../1-media-types_10.0.0_all.deb ... Unpacking media-types (10.0.0) ... Selecting previously unselected package readline-common. Preparing to unpack .../2-readline-common_8.2-1.3_all.deb ... Unpacking readline-common (8.2-1.3) ... Selecting previously unselected package libreadline8:i386. Preparing to unpack .../3-libreadline8_8.2-1.3_i386.deb ... Unpacking libreadline8:i386 (8.2-1.3) ... Selecting previously unselected package libpython3.11-stdlib:i386. Preparing to unpack .../4-libpython3.11-stdlib_3.11.2-6_i386.deb ... Unpacking libpython3.11-stdlib:i386 (3.11.2-6) ... Selecting previously unselected package python3.11. Preparing to unpack .../5-python3.11_3.11.2-6_i386.deb ... Unpacking python3.11 (3.11.2-6) ... Selecting previously unselected package libpython3-stdlib:i386. Preparing to unpack .../6-libpython3-stdlib_3.11.2-1+b1_i386.deb ... Unpacking libpython3-stdlib:i386 (3.11.2-1+b1) ... Setting up python3-minimal (3.11.2-1+b1) ... Selecting previously unselected package python3. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 20349 files and directories currently installed.) Preparing to unpack .../00-python3_3.11.2-1+b1_i386.deb ... Unpacking python3 (3.11.2-1+b1) ... Selecting previously unselected package sensible-utils. Preparing to unpack .../01-sensible-utils_0.0.17+nmu1_all.deb ... Unpacking sensible-utils (0.0.17+nmu1) ... Selecting previously unselected package libmagic-mgc. Preparing to unpack .../02-libmagic-mgc_1%3a5.44-3_i386.deb ... Unpacking libmagic-mgc (1:5.44-3) ... Selecting previously unselected package libmagic1:i386. Preparing to unpack .../03-libmagic1_1%3a5.44-3_i386.deb ... Unpacking libmagic1:i386 (1:5.44-3) ... Selecting previously unselected package file. Preparing to unpack .../04-file_1%3a5.44-3_i386.deb ... Unpacking file (1:5.44-3) ... Selecting previously unselected package gettext-base. Preparing to unpack .../05-gettext-base_0.21-12_i386.deb ... Unpacking gettext-base (0.21-12) ... Selecting previously unselected package libuchardet0:i386. Preparing to unpack .../06-libuchardet0_0.0.7-1_i386.deb ... Unpacking libuchardet0:i386 (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../07-groff-base_1.22.4-10_i386.deb ... Unpacking groff-base (1.22.4-10) ... Selecting previously unselected package bsdextrautils. Preparing to unpack .../08-bsdextrautils_2.38.1-5+b1_i386.deb ... Unpacking bsdextrautils (2.38.1-5+b1) ... Selecting previously unselected package libpipeline1:i386. Preparing to unpack .../09-libpipeline1_1.5.7-1_i386.deb ... Unpacking libpipeline1:i386 (1.5.7-1) ... Selecting previously unselected package man-db. Preparing to unpack .../10-man-db_2.11.2-2_i386.deb ... Unpacking man-db (2.11.2-2) ... Selecting previously unselected package m4. Preparing to unpack .../11-m4_1.4.19-3_i386.deb ... Unpacking m4 (1.4.19-3) ... Selecting previously unselected package autoconf. Preparing to unpack .../12-autoconf_2.71-3_all.deb ... Unpacking autoconf (2.71-3) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../13-autotools-dev_20220109.1_all.deb ... Unpacking autotools-dev (20220109.1) ... Selecting previously unselected package automake. Preparing to unpack .../14-automake_1%3a1.16.5-1.3_all.deb ... Unpacking automake (1:1.16.5-1.3) ... Selecting previously unselected package autopoint. Preparing to unpack .../15-autopoint_0.21-12_all.deb ... Unpacking autopoint (0.21-12) ... Selecting previously unselected package libdebhelper-perl. Preparing to unpack .../16-libdebhelper-perl_13.11.4_all.deb ... Unpacking libdebhelper-perl (13.11.4) ... Selecting previously unselected package libtool. Preparing to unpack .../17-libtool_2.4.7-5_all.deb ... Unpacking libtool (2.4.7-5) ... Selecting previously unselected package dh-autoreconf. Preparing to unpack .../18-dh-autoreconf_20_all.deb ... Unpacking dh-autoreconf (20) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../19-libarchive-zip-perl_1.68-1_all.deb ... Unpacking libarchive-zip-perl (1.68-1) ... Selecting previously unselected package libsub-override-perl. Preparing to unpack .../20-libsub-override-perl_0.09-4_all.deb ... Unpacking libsub-override-perl (0.09-4) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../21-libfile-stripnondeterminism-perl_1.13.1-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (1.13.1-1) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../22-dh-strip-nondeterminism_1.13.1-1_all.deb ... Unpacking dh-strip-nondeterminism (1.13.1-1) ... Selecting previously unselected package libelf1:i386. Preparing to unpack .../23-libelf1_0.188-2.1_i386.deb ... Unpacking libelf1:i386 (0.188-2.1) ... Selecting previously unselected package dwz. Preparing to unpack .../24-dwz_0.15-1_i386.deb ... Unpacking dwz (0.15-1) ... Selecting previously unselected package libicu72:i386. Preparing to unpack .../25-libicu72_72.1-3_i386.deb ... Unpacking libicu72:i386 (72.1-3) ... Selecting previously unselected package libxml2:i386. Preparing to unpack .../26-libxml2_2.9.14+dfsg-1.2_i386.deb ... Unpacking libxml2:i386 (2.9.14+dfsg-1.2) ... Selecting previously unselected package gettext. Preparing to unpack .../27-gettext_0.21-12_i386.deb ... Unpacking gettext (0.21-12) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../28-intltool-debian_0.35.0+20060710.6_all.deb ... Unpacking intltool-debian (0.35.0+20060710.6) ... Selecting previously unselected package po-debconf. Preparing to unpack .../29-po-debconf_1.0.21+nmu1_all.deb ... Unpacking po-debconf (1.0.21+nmu1) ... Selecting previously unselected package debhelper. Preparing to unpack .../30-debhelper_13.11.4_all.deb ... Unpacking debhelper (13.11.4) ... Selecting previously unselected package python3-lib2to3. Preparing to unpack .../31-python3-lib2to3_3.11.2-3_all.deb ... Unpacking python3-lib2to3 (3.11.2-3) ... Selecting previously unselected package python3-distutils. Preparing to unpack .../32-python3-distutils_3.11.2-3_all.deb ... Unpacking python3-distutils (3.11.2-3) ... Selecting previously unselected package dh-python. Preparing to unpack .../33-dh-python_5.20230130_all.deb ... Unpacking dh-python (5.20230130) ... Selecting previously unselected package hdf5-helpers. Preparing to unpack .../34-hdf5-helpers_1.10.8+repack1-1_i386.deb ... Unpacking hdf5-helpers (1.10.8+repack1-1) ... Selecting previously unselected package libaec0:i386. Preparing to unpack .../35-libaec0_1.0.6-1+b1_i386.deb ... Unpacking libaec0:i386 (1.0.6-1+b1) ... Selecting previously unselected package libsz2:i386. Preparing to unpack .../36-libsz2_1.0.6-1+b1_i386.deb ... Unpacking libsz2:i386 (1.0.6-1+b1) ... Selecting previously unselected package libaec-dev:i386. Preparing to unpack .../37-libaec-dev_1.0.6-1+b1_i386.deb ... Unpacking libaec-dev:i386 (1.0.6-1+b1) ... Selecting previously unselected package libbrotli1:i386. Preparing to unpack .../38-libbrotli1_1.0.9-2+b6_i386.deb ... Unpacking libbrotli1:i386 (1.0.9-2+b6) ... Selecting previously unselected package libsasl2-modules-db:i386. Preparing to unpack .../39-libsasl2-modules-db_2.1.28+dfsg-10_i386.deb ... Unpacking libsasl2-modules-db:i386 (2.1.28+dfsg-10) ... Selecting previously unselected package libsasl2-2:i386. Preparing to unpack .../40-libsasl2-2_2.1.28+dfsg-10_i386.deb ... Unpacking libsasl2-2:i386 (2.1.28+dfsg-10) ... Selecting previously unselected package libldap-2.5-0:i386. Preparing to unpack .../41-libldap-2.5-0_2.5.13+dfsg-5_i386.deb ... Unpacking libldap-2.5-0:i386 (2.5.13+dfsg-5) ... Selecting previously unselected package libnghttp2-14:i386. Preparing to unpack .../42-libnghttp2-14_1.52.0-1_i386.deb ... Unpacking libnghttp2-14:i386 (1.52.0-1) ... Selecting previously unselected package libpsl5:i386. Preparing to unpack .../43-libpsl5_0.21.2-1_i386.deb ... Unpacking libpsl5:i386 (0.21.2-1) ... Selecting previously unselected package librtmp1:i386. Preparing to unpack .../44-librtmp1_2.4+20151223.gitfa8646d.1-2+b2_i386.deb ... Unpacking librtmp1:i386 (2.4+20151223.gitfa8646d.1-2+b2) ... Selecting previously unselected package libssh2-1:i386. Preparing to unpack .../45-libssh2-1_1.10.0-3+b1_i386.deb ... Unpacking libssh2-1:i386 (1.10.0-3+b1) ... Selecting previously unselected package libcurl4:i386. Preparing to unpack .../46-libcurl4_7.88.1-10_i386.deb ... Unpacking libcurl4:i386 (7.88.1-10) ... Selecting previously unselected package libcurl4-openssl-dev:i386. Preparing to unpack .../47-libcurl4-openssl-dev_7.88.1-10_i386.deb ... Unpacking libcurl4-openssl-dev:i386 (7.88.1-10) ... Selecting previously unselected package libexpat1-dev:i386. Preparing to unpack .../48-libexpat1-dev_2.5.0-1_i386.deb ... Unpacking libexpat1-dev:i386 (2.5.0-1) ... Selecting previously unselected package libgfortran5:i386. Preparing to unpack .../49-libgfortran5_12.2.0-14_i386.deb ... Unpacking libgfortran5:i386 (12.2.0-14) ... Selecting previously unselected package libhdf5-103-1:i386. Preparing to unpack .../50-libhdf5-103-1_1.10.8+repack1-1_i386.deb ... Unpacking libhdf5-103-1:i386 (1.10.8+repack1-1) ... Selecting previously unselected package libhdf5-cpp-103-1:i386. Preparing to unpack .../51-libhdf5-cpp-103-1_1.10.8+repack1-1_i386.deb ... Unpacking libhdf5-cpp-103-1:i386 (1.10.8+repack1-1) ... Selecting previously unselected package libhdf5-fortran-102:i386. Preparing to unpack .../52-libhdf5-fortran-102_1.10.8+repack1-1_i386.deb ... Unpacking libhdf5-fortran-102:i386 (1.10.8+repack1-1) ... Selecting previously unselected package libhdf5-hl-100:i386. Preparing to unpack .../53-libhdf5-hl-100_1.10.8+repack1-1_i386.deb ... Unpacking libhdf5-hl-100:i386 (1.10.8+repack1-1) ... Selecting previously unselected package libhdf5-hl-fortran-100:i386. Preparing to unpack .../54-libhdf5-hl-fortran-100_1.10.8+repack1-1_i386.deb ... Unpacking libhdf5-hl-fortran-100:i386 (1.10.8+repack1-1) ... Selecting previously unselected package libhdf5-hl-cpp-100:i386. Preparing to unpack .../55-libhdf5-hl-cpp-100_1.10.8+repack1-1_i386.deb ... Unpacking libhdf5-hl-cpp-100:i386 (1.10.8+repack1-1) ... Selecting previously unselected package zlib1g-dev:i386. Preparing to unpack .../56-zlib1g-dev_1%3a1.2.13.dfsg-1_i386.deb ... Unpacking zlib1g-dev:i386 (1:1.2.13.dfsg-1) ... Selecting previously unselected package libjpeg62-turbo:i386. Preparing to unpack .../57-libjpeg62-turbo_1%3a2.1.5-2_i386.deb ... Unpacking libjpeg62-turbo:i386 (1:2.1.5-2) ... Selecting previously unselected package libjpeg62-turbo-dev:i386. Preparing to unpack .../58-libjpeg62-turbo-dev_1%3a2.1.5-2_i386.deb ... Unpacking libjpeg62-turbo-dev:i386 (1:2.1.5-2) ... Selecting previously unselected package libjpeg-dev:i386. Preparing to unpack .../59-libjpeg-dev_1%3a2.1.5-2_i386.deb ... Unpacking libjpeg-dev:i386 (1:2.1.5-2) ... Selecting previously unselected package libssl-dev:i386. Preparing to unpack .../60-libssl-dev_3.0.9-1_i386.deb ... Unpacking libssl-dev:i386 (3.0.9-1) ... Selecting previously unselected package libhdf5-dev. 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Setting up libdebhelper-perl (13.11.4) ... Setting up libbrotli1:i386 (1.0.9-2+b6) ... Setting up libnghttp2-14:i386 (1.52.0-1) ... Setting up libmagic1:i386 (1:5.44-3) ... Setting up gettext-base (0.21-12) ... Setting up m4 (1.4.19-3) ... Setting up file (1:5.44-3) ... Setting up libaec0:i386 (1.0.6-1+b1) ... Setting up libsasl2-modules-db:i386 (2.1.28+dfsg-10) ... Setting up autotools-dev (20220109.1) ... Setting up libpkgconf3:i386 (1.8.1-1) ... Setting up libexpat1-dev:i386 (2.5.0-1) ... Setting up libjpeg62-turbo:i386 (1:2.1.5-2) ... Setting up libjpeg62-turbo-dev:i386 (1:2.1.5-2) ... Setting up librtmp1:i386 (2.4+20151223.gitfa8646d.1-2+b2) ... Setting up libssl-dev:i386 (3.0.9-1) ... Setting up autopoint (0.21-12) ... Setting up pkgconf-bin (1.8.1-1) ... Setting up libsasl2-2:i386 (2.1.28+dfsg-10) ... Setting up libgfortran5:i386 (12.2.0-14) ... Setting up autoconf (2.71-3) ... Setting up zlib1g-dev:i386 (1:1.2.13.dfsg-1) ... Setting up sensible-utils (0.0.17+nmu1) ... Setting up libuchardet0:i386 (0.0.7-1) ... Setting up libsub-override-perl (0.09-4) ... Setting up libssh2-1:i386 (1.10.0-3+b1) ... Setting up libjs-jquery (3.6.1+dfsg+~3.5.14-1) ... Setting up libelf1:i386 (0.188-2.1) ... Setting up readline-common (8.2-1.3) ... Setting up libxml2:i386 (2.9.14+dfsg-1.2) ... Setting up libsz2:i386 (1.0.6-1+b1) ... Setting up libjs-underscore (1.13.4~dfsg+~1.11.4-3) ... Setting up automake (1:1.16.5-1.3) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libfile-stripnondeterminism-perl (1.13.1-1) ... Setting up gettext (0.21-12) ... Setting up libtool (2.4.7-5) ... Setting up libreadline8:i386 (8.2-1.3) ... Setting up libaec-dev:i386 (1.0.6-1+b1) ... Setting up libjpeg-dev:i386 (1:2.1.5-2) ... Setting up libldap-2.5-0:i386 (2.5.13+dfsg-5) ... Setting up pkgconf:i386 (1.8.1-1) ... Setting up intltool-debian (0.35.0+20060710.6) ... Setting up dh-autoreconf (20) ... 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Building tag database... -> Finished parsing the build-deps I: Building the package I: Running cd /build/cbflib-0.9.7+dfsg1/ && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-buildpackage -us -uc -b && env PATH="/usr/sbin:/usr/bin:/sbin:/bin:/usr/games" HOME="/nonexistent/first-build" dpkg-genchanges -S > ../cbflib_0.9.7+dfsg1-2_source.changes dpkg-buildpackage: info: source package cbflib dpkg-buildpackage: info: source version 0.9.7+dfsg1-2 dpkg-buildpackage: info: source distribution unstable dpkg-buildpackage: info: source changed by Picca Frédéric-Emmanuel dpkg-source --before-build . dpkg-buildpackage: info: host architecture i386 debian/rules clean dh clean --no-parallel dh_auto_clean -O--no-parallel make -j1 distclean make[1]: Entering directory '/build/cbflib-0.9.7+dfsg1' ./.undosymlinks make[1]: Leaving directory '/build/cbflib-0.9.7+dfsg1' debian/rules execute_after_dh_auto_clean-arch make[1]: Entering directory '/build/cbflib-0.9.7+dfsg1' /usr/bin/make 'C++:=$(CXX)' /build/cbflib-0.9.7+dfsg1/pycbf/setup.py make[2]: Entering directory '/build/cbflib-0.9.7+dfsg1' (m4 -P -Dregexlib= -Dregexlib2= \ -Ddefine_macros="('SWIG_PYTHON_STRICT_BYTE_CHAR', None)" \ -Dextra_compile_args=-I/usr/include/hdf5/serial \ -Dregexlibdir=/build/cbflib-0.9.7+dfsg1/lib -Dhdf5_prefix= \ /build/cbflib-0.9.7+dfsg1/m4/setup_py.m4 > /build/cbflib-0.9.7+dfsg1/pycbf/setup.py) make[2]: Leaving directory '/build/cbflib-0.9.7+dfsg1' dh_auto_clean --buildsystem=pybuild --sourcedirectory=pycbf I: pybuild base:240: python3.11 setup.py clean /build/cbflib-0.9.7+dfsg1/pycbf/setup.py:7: DeprecationWarning: The distutils package is deprecated and slated for removal in Python 3.12. Use setuptools or check PEP 632 for potential alternatives from distutils.core import setup, Extension running clean removing '/build/cbflib-0.9.7+dfsg1/.pybuild/cpython3_3.11_pycbf/build' (and everything under it) 'build/bdist.linux-i386' does not exist -- can't clean it 'build/scripts-3.11' does not exist -- can't clean it rm -f pycbf/setup.py make[1]: Leaving directory '/build/cbflib-0.9.7+dfsg1' dh_autoreconf_clean -O--no-parallel dh_clean -O--no-parallel debian/rules binary dh binary --no-parallel dh_update_autotools_config -O--no-parallel dh_autoreconf -O--no-parallel dh_auto_configure -O--no-parallel debian/rules execute_after_dh_auto_configure-arch make[1]: Entering directory '/build/cbflib-0.9.7+dfsg1' /usr/bin/make 'C++:=$(CXX)' /build/cbflib-0.9.7+dfsg1/pycbf/setup.py make[2]: Entering directory '/build/cbflib-0.9.7+dfsg1' (m4 -P -Dregexlib= -Dregexlib2= \ -Ddefine_macros="('SWIG_PYTHON_STRICT_BYTE_CHAR', None)" \ -Dextra_compile_args=-I/usr/include/hdf5/serial \ -Dregexlibdir=/build/cbflib-0.9.7+dfsg1/lib -Dhdf5_prefix= \ /build/cbflib-0.9.7+dfsg1/m4/setup_py.m4 > /build/cbflib-0.9.7+dfsg1/pycbf/setup.py) make[2]: Leaving directory '/build/cbflib-0.9.7+dfsg1' dh_auto_configure --buildsystem=pybuild --sourcedirectory=pycbf I: pybuild base:240: python3.11 setup.py config /build/cbflib-0.9.7+dfsg1/pycbf/setup.py:7: DeprecationWarning: The distutils package is deprecated and slated for removal in Python 3.12. Use setuptools or check PEP 632 for potential alternatives from distutils.core import setup, Extension running config make[1]: Leaving directory '/build/cbflib-0.9.7+dfsg1' debian/rules override_dh_auto_build-arch make[1]: Entering directory '/build/cbflib-0.9.7+dfsg1' # build the C/C++ library dh_auto_build -- 'C++:=$(CXX)' shared all make -j1 "INSTALL=install --strip-program=true" C\+\+:=\$\(CXX\) shared all make[2]: Entering directory '/build/cbflib-0.9.7+dfsg1' rm -f /build/cbflib-0.9.7+dfsg1/solib/libcbf.so rm -f *.o mkdir -p /build/cbflib-0.9.7+dfsg1/solib gcc -g -O2 -ffile-prefix-map=/build/cbflib-0.9.7+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -Wall -D_USE_XOPEN_EXTENDED -fno-strict-aliasing -DCBF_REGEXLIB_REGEX -fPIC -I/build/cbflib-0.9.7+dfsg1/include -I/build/cbflib-0.9.7+dfsg1/src -I/usr/include/hdf5/serial -c /build/cbflib-0.9.7+dfsg1/src/cbf.c /build/cbflib-0.9.7+dfsg1/src/cbf_airy_disk.c /build/cbflib-0.9.7+dfsg1/src/cbf_alloc.c /build/cbflib-0.9.7+dfsg1/src/cbf_ascii.c /build/cbflib-0.9.7+dfsg1/src/cbf_binary.c /build/cbflib-0.9.7+dfsg1/src/cbf_byte_offset.c /build/cbflib-0.9.7+dfsg1/src/cbf_canonical.c /build/cbflib-0.9.7+dfsg1/src/cbf_codes.c /build/cbflib-0.9.7+dfsg1/src/cbf_compress.c /build/cbflib-0.9.7+dfsg1/src/cbf_context.c /build/cbflib-0.9.7+dfsg1/src/cbf_copy.c /build/cbflib-0.9.7+dfsg1/src/cbf_file.c /build/cbflib-0.9.7+dfsg1/src/cbf_getopt.c /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5_filter.c /build/cbflib-0.9.7+dfsg1/src/cbf_lex.c /build/cbflib-0.9.7+dfsg1/src/cbf_minicbf_header.c /build/cbflib-0.9.7+dfsg1/src/cbf_nibble_offset.c /build/cbflib-0.9.7+dfsg1/src/cbf_packed.c /build/cbflib-0.9.7+dfsg1/src/cbf_predictor.c /build/cbflib-0.9.7+dfsg1/src/cbf_read_binary.c /build/cbflib-0.9.7+dfsg1/src/cbf_read_mime.c /build/cbflib-0.9.7+dfsg1/src/cbf_simple.c /build/cbflib-0.9.7+dfsg1/src/cbf_string.c /build/cbflib-0.9.7+dfsg1/src/cbf_stx.c /build/cbflib-0.9.7+dfsg1/src/cbf_tree.c /build/cbflib-0.9.7+dfsg1/src/cbf_uncompressed.c /build/cbflib-0.9.7+dfsg1/src/cbf_write.c /build/cbflib-0.9.7+dfsg1/src/cbf_write_binary.c /build/cbflib-0.9.7+dfsg1/src/cbf_ws.c /build/cbflib-0.9.7+dfsg1/src/cbff.c /build/cbflib-0.9.7+dfsg1/src/md5c.c /build/cbflib-0.9.7+dfsg1/src/img.c /build/cbflib-0.9.7+dfsg1/src/fgetln.c /build/cbflib-0.9.7+dfsg1/src/cbf.c: In function 'cbf_select_saveframe': /build/cbflib-0.9.7+dfsg1/src/cbf.c:2498:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 2498 | if (!handle) | ^~ In file included from /build/cbflib-0.9.7+dfsg1/src/cbf.c:256: /build/cbflib-0.9.7+dfsg1/include/cbf.h:895:24: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 895 | #define cbf_failnez(f) { int err; err = (f); if (err) return err; } | ^ /build/cbflib-0.9.7+dfsg1/src/cbf.c:2505:5: note: in expansion of macro 'cbf_failnez' 2505 | cbf_failnez (cbf_find_parent (&node, handle->node, CBF_DATABLOCK)) | ^~~~~~~~~~~ /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c: In function 'cbf_configParse_extractVector': /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4361:17: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 4361 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",*ln); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~ | | | size_t {aka unsigned int} /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4361:17: note: in definition of macro 'REQUIRE_NOT_EOL' 4361 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",*ln); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4361:49: note: format string is defined here 4361 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",*ln); \ | ~~^ | | | long unsigned int | %u /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4361:17: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 4361 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",*ln); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~ | | | size_t {aka unsigned int} /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4361:17: note: in definition of macro 'REQUIRE_NOT_EOL' 4361 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",*ln); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4361:49: note: format string is defined here 4361 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",*ln); \ | ~~^ | | | long unsigned int | %u /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4375:61: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 4375 | fprintf(logFile,"Config parsing error on line %lu: expected a number, got '%s'\n",*ln,*buf); | ~~^ ~~~ | | | | long unsigned int size_t {aka unsigned int} | %u /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4361:17: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 4361 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",*ln); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~ | | | size_t {aka unsigned int} /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4361:17: note: in definition of macro 'REQUIRE_NOT_EOL' 4361 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",*ln); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4361:49: note: format string is defined here 4361 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",*ln); \ | ~~^ | | | long unsigned int | %u /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4383:61: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 4383 | fprintf(logFile,"Config parsing error on line %lu: expected a number, got '%s'\n",*ln,*buf); | ~~^ ~~~ | | | | long unsigned int size_t {aka unsigned int} | %u /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4361:17: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 4361 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",*ln); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~ | | | size_t {aka unsigned int} /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4361:17: note: in definition of macro 'REQUIRE_NOT_EOL' 4361 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",*ln); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4361:49: note: format string is defined here 4361 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",*ln); \ | ~~^ | | | long unsigned int | %u /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4391:61: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 4391 | fprintf(logFile,"Config parsing error on line %lu: expected a number, got '%s'\n",*ln,*buf); | ~~^ ~~~ | | | | long unsigned int size_t {aka unsigned int} | %u /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4361:17: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 4361 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",*ln); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~ | | | size_t {aka unsigned int} /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4361:17: note: in definition of macro 'REQUIRE_NOT_EOL' 4361 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",*ln); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4361:49: note: format string is defined here 4361 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",*ln); \ | ~~^ | | | long unsigned int | %u /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c: In function 'cbf_config_parse': /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4456:17: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 4456 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ | | | size_t {aka unsigned int} /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4456:17: note: in definition of macro 'REQUIRE_NOT_EOL' 4456 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4456:49: note: format string is defined here 4456 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \ | ~~^ | | | long unsigned int | %u /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4489:69: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 4489 | fprintf(logFile,"Config parsing error on line %lu: Duplicate axis definition for minicbf axis '%s'\n",ln,tkn); | ~~^ ~~ | | | | long unsigned int size_t {aka unsigned int} | %u /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4456:17: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 4456 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ | | | size_t {aka unsigned int} /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4456:17: note: in definition of macro 'REQUIRE_NOT_EOL' 4456 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4456:49: note: format string is defined here 4456 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \ | ~~^ | | | long unsigned int | %u /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4440:17: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 4440 | fprintf(logFile,"Config parsing error on line %lu: expected " #TKN ", got '%s'\n",ln,tkn); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ | | | size_t {aka unsigned int} /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4440:17: note: in definition of macro 'REQUIRE_TOKEN' 4440 | fprintf(logFile,"Config parsing error on line %lu: expected " #TKN ", got '%s'\n",ln,tkn); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4456:17: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 4456 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ | | | size_t {aka unsigned int} /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4456:17: note: in definition of macro 'REQUIRE_NOT_EOL' 4456 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4456:49: note: format string is defined here 4456 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \ | ~~^ | | | long unsigned int | %u /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4502:69: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 4502 | fprintf(logFile,"Config parsing error on line %lu: Duplicate axis definition for Nexus axis '%s'\n",ln,tkn); | ~~^ ~~ | | | | long unsigned int size_t {aka unsigned int} | %u /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4448:17: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 4448 | fprintf(logFile,"Config parsing error on line %lu: expected '\\n', got '%s'\n",ln,tkn); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ | | | size_t {aka unsigned int} /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4448:17: note: in definition of macro 'REQUIRE_EOL' 4448 | fprintf(logFile,"Config parsing error on line %lu: expected '\\n', got '%s'\n",ln,tkn); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4448:49: note: format string is defined here 4448 | fprintf(logFile,"Config parsing error on line %lu: expected '\\n', got '%s'\n",ln,tkn); \ | ~~^ | | | long unsigned int | %u /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4456:17: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 4456 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ | | | size_t {aka unsigned int} /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4456:17: note: in definition of macro 'REQUIRE_NOT_EOL' 4456 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4456:49: note: format string is defined here 4456 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \ | ~~^ | | | long unsigned int | %u /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4440:17: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 4440 | fprintf(logFile,"Config parsing error on line %lu: expected " #TKN ", got '%s'\n",ln,tkn); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ | | | size_t {aka unsigned int} /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4440:17: note: in definition of macro 'REQUIRE_TOKEN' 4440 | fprintf(logFile,"Config parsing error on line %lu: expected " #TKN ", got '%s'\n",ln,tkn); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4456:17: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 4456 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ | | | size_t {aka unsigned int} /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4456:17: note: in definition of macro 'REQUIRE_NOT_EOL' 4456 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4456:49: note: format string is defined here 4456 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \ | ~~^ | | | long unsigned int | %u /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4464:17: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 4464 | fprintf(logFile,"Config parsing error on line %lu: Nexus axis '%s' not defined\n",ln,tkn); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ | | | size_t {aka unsigned int} /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4464:17: note: in definition of macro 'REQUIRE_NEXUS_AXIS' 4464 | fprintf(logFile,"Config parsing error on line %lu: Nexus axis '%s' not defined\n",ln,tkn); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4464:49: note: format string is defined here 4464 | fprintf(logFile,"Config parsing error on line %lu: Nexus axis '%s' not defined\n",ln,tkn); \ | ~~^ | | | long unsigned int | %u /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4448:17: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 4448 | fprintf(logFile,"Config parsing error on line %lu: expected '\\n', got '%s'\n",ln,tkn); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ | | | size_t {aka unsigned int} /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4448:17: note: in definition of macro 'REQUIRE_EOL' 4448 | fprintf(logFile,"Config parsing error on line %lu: expected '\\n', got '%s'\n",ln,tkn); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4448:49: note: format string is defined here 4448 | fprintf(logFile,"Config parsing error on line %lu: expected '\\n', got '%s'\n",ln,tkn); \ | ~~^ | | | long unsigned int | %u /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4527:69: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 4527 | fprintf(logFile,"Config parsing error on line %lu: Nexus axis '%s' not defined\n",ln,tkn); | ~~^ ~~ | | | | long unsigned int size_t {aka unsigned int} | %u /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4456:17: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 4456 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ | | | size_t {aka unsigned int} /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4456:17: note: in definition of macro 'REQUIRE_NOT_EOL' 4456 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4456:49: note: format string is defined here 4456 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \ | ~~^ | | | long unsigned int | %u /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4456:17: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 4456 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ | | | size_t {aka unsigned int} /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4456:17: note: in definition of macro 'REQUIRE_NOT_EOL' 4456 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4456:49: note: format string is defined here 4456 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \ | ~~^ | | | long unsigned int | %u /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4464:17: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 4464 | fprintf(logFile,"Config parsing error on line %lu: Nexus axis '%s' not defined\n",ln,tkn); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ | | | size_t {aka unsigned int} /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4464:17: note: in definition of macro 'REQUIRE_NEXUS_AXIS' 4464 | fprintf(logFile,"Config parsing error on line %lu: Nexus axis '%s' not defined\n",ln,tkn); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4464:49: note: format string is defined here 4464 | fprintf(logFile,"Config parsing error on line %lu: Nexus axis '%s' not defined\n",ln,tkn); \ | ~~^ | | | long unsigned int | %u /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4448:17: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 4448 | fprintf(logFile,"Config parsing error on line %lu: expected '\\n', got '%s'\n",ln,tkn); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ | | | size_t {aka unsigned int} /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4448:17: note: in definition of macro 'REQUIRE_EOL' 4448 | fprintf(logFile,"Config parsing error on line %lu: expected '\\n', got '%s'\n",ln,tkn); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4448:49: note: format string is defined here 4448 | fprintf(logFile,"Config parsing error on line %lu: expected '\\n', got '%s'\n",ln,tkn); \ | ~~^ | | | long unsigned int | %u /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4456:17: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 4456 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ | | | size_t {aka unsigned int} /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4456:17: note: in definition of macro 'REQUIRE_NOT_EOL' 4456 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4456:49: note: format string is defined here 4456 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \ | ~~^ | | | long unsigned int | %u /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4464:17: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 4464 | fprintf(logFile,"Config parsing error on line %lu: Nexus axis '%s' not defined\n",ln,tkn); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ | | | size_t {aka unsigned int} /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4464:17: note: in definition of macro 'REQUIRE_NEXUS_AXIS' 4464 | fprintf(logFile,"Config parsing error on line %lu: Nexus axis '%s' not defined\n",ln,tkn); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4464:49: note: format string is defined here 4464 | fprintf(logFile,"Config parsing error on line %lu: Nexus axis '%s' not defined\n",ln,tkn); \ | ~~^ | | | long unsigned int | %u /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4448:17: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 4448 | fprintf(logFile,"Config parsing error on line %lu: expected '\\n', got '%s'\n",ln,tkn); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ | | | size_t {aka unsigned int} /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4448:17: note: in definition of macro 'REQUIRE_EOL' 4448 | fprintf(logFile,"Config parsing error on line %lu: expected '\\n', got '%s'\n",ln,tkn); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4448:49: note: format string is defined here 4448 | fprintf(logFile,"Config parsing error on line %lu: expected '\\n', got '%s'\n",ln,tkn); \ | ~~^ | | | long unsigned int | %u /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c: In function 'cbf_write_nx2cbf__entry_op': /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:21473:31: warning: unused variable 'nxpdb_found' [-Wunused-variable] 21473 | const int nxpdb_found = _cbf_Attrval(object,"NXpdb_class", &NXpdb_class); | ^~~~~~~~~~~ /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c: In function 'cbf_write_nx2cbf': /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:22527:25: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 22527 | if (pixel_offset_name[i]) free((void*)pixel_offset_name[i]);pixel_offset_name[i]=NULL; | ^~ /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:22527:85: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 22527 | if (pixel_offset_name[i]) free((void*)pixel_offset_name[i]);pixel_offset_name[i]=NULL; | ^~~~~~~~~~~~~~~~~ /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:22528:25: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 22528 | if (pixel_offset_long_name[i]) free((void*)pixel_offset_long_name[i]);pixel_offset_long_name[i]=NULL; | ^~ /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:22528:95: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 22528 | if (pixel_offset_long_name[i]) free((void*)pixel_offset_long_name[i]);pixel_offset_long_name[i]=NULL; | ^~~~~~~~~~~~~~~~~~~~~~ /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:22529:25: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 22529 | if (pixel_size_name[i]) free((void*)pixel_size_name[i]);pixel_size_name[i]=NULL; | ^~ /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:22529:81: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 22529 | if (pixel_size_name[i]) free((void*)pixel_size_name[i]);pixel_size_name[i]=NULL; | ^~~~~~~~~~~~~~~ /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c: In function 'cbf_h5ds_store_as_column': /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:28703:16: warning: unused variable 'byte_order' [-Wunused-variable] 28703 | char * byte_order; | ^~~~~~~~~~ /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:28681:14: warning: unused variable 'buffer' [-Wunused-variable] 28681 | char buffer[25]; | ^~~~~~ /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c: In function 'cbf_object_visit': /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:30485:36: warning: unused variable 'atnexus' [-Wunused-variable] 30485 | int save_innexus, innexus, atnexus; /* within or at NXentry */ | ^~~~~~~ /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c: In function 'cbf_read_h5file_group': /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:31721:13: warning: unused variable 'errorcode' [-Wunused-variable] 31721 | int errorcode = 0; | ^~~~~~~~~ /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:31717:19: warning: unused variable 'node' [-Wunused-variable] 31717 | cbf_node *node; | ^~~~ /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c: At top level: /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:9141:16: warning: 'cbf_require_nxdetectors' defined but not used [-Wunused-function] 9141 | static int cbf_require_nxdetectors(const cbf_handle handle, | ^~~~~~~~~~~~~~~~~~~~~~~ /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c: In function 'cbf_create_h5handle2': /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:17990:28: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 17990 | svnrev[ii] = '\0'; | ~~~~~~~~~~~^~~~~~ /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:17956:14: note: at offset -1 into destination object 'svnrev' of size 12 17956 | char svnrev[] = CBF_SVN_REVISION_STRING; | ^~~~~~ /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:18018:9: warning: '__builtin___strncat_chk' output may be truncated copying 10 bytes from a string of length 11 [-Wstringop-truncation] 18018 | strncat(buffer,svnrev+irev,10); | ^ /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:18020:9: warning: '__builtin___strncat_chk' output may be truncated copying 50 bytes from a string of length 53 [-Wstringop-truncation] 18020 | strncat(buffer,svndate+idate,50); | ^ /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c: In function 'cbf_create_h5handle2u': /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:18072:28: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 18072 | svnrev[ii] = '\0'; | ~~~~~~~~~~~^~~~~~ /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:18038:14: note: at offset -1 into destination object 'svnrev' of size 12 18038 | char svnrev[] = CBF_SVN_REVISION_STRING; | ^~~~~~ /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:18100:9: warning: '__builtin___strncat_chk' output may be truncated copying 10 bytes from a string of length 11 [-Wstringop-truncation] 18100 | strncat(buffer,svnrev+irev,10); | ^ /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:18102:9: warning: '__builtin___strncat_chk' output may be truncated copying 50 bytes from a string of length 53 [-Wstringop-truncation] 18102 | strncat(buffer,svndate+idate,50); | ^ In file included from /usr/include/stdio.h:906, from /usr/include/hdf5/serial/H5Epublic.h:20, from /usr/include/hdf5/serial/hdf5.h:26, from /build/cbflib-0.9.7+dfsg1/include/cbf.h:253, from /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:258: In function 'sprintf', inlined from 'cbf_H5Dread_element_as_string' at /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:3440:21: /usr/include/i386-linux-gnu/bits/stdio2.h:30:10: warning: null destination pointer [-Wformat-overflow=] 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c: In function 'cbf_write_h5category': /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:16861:30: warning: 'row' may be used uninitialized [-Wmaybe-uninitialized] 16861 | cbf_failnez (cbf_get_columnrow (&text, category->child [column], row)); | ^~~~~~~~~~~~~~~~~ /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:15949:30: note: 'row' was declared here 15949 | unsigned int column, row; | ^~~ /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5_filter.c: In function 'cbf_h5z_filter': /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5_filter.c:799:71: warning: format '%ld' expects argument of type 'long int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 799 | sprintf (text, "X-Binary-Element-Type: \"signed %ld-bit real IEEE\"\n", | ~~^ | | | long int | %d /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5_filter.c:803:75: warning: format '%ld' expects argument of type 'long int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 803 | sprintf (text, "X-Binary-Element-Type: \"signed %ld-bit integer\"\n", | ~~^ | | | long int | %d /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5_filter.c:806:77: warning: format '%ld' expects argument of type 'long int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 806 | sprintf (text, "X-Binary-Element-Type: \"unsigned %ld-bit integer\"\n", | ~~^ | | | long int | %d /build/cbflib-0.9.7+dfsg1/src/cbf_minicbf_header.c: In function 'cbf_append_string.part.0': /build/cbflib-0.9.7+dfsg1/src/cbf_minicbf_header.c:325:9: warning: '__builtin_strncpy' output truncated before terminating nul copying as many bytes from a string as its length [-Wstringop-truncation] 325 | strncpy(*dst,src,srclen); | ^ /build/cbflib-0.9.7+dfsg1/src/cbf_minicbf_header.c:302:18: note: length computed here 302 | srclen = strlen(src); | ^~~~~~~~~~~ /build/cbflib-0.9.7+dfsg1/src/cbf_minicbf_header.c: In function 'cbf_set_minicbf_header': /build/cbflib-0.9.7+dfsg1/src/cbf_minicbf_header.c:325:9: warning: '__builtin_strncpy' output truncated before terminating nul copying 1 byte from a string of the same length [-Wstringop-truncation] 325 | strncpy(*dst,src,srclen); | ^ /build/cbflib-0.9.7+dfsg1/src/cbf_nibble_offset.c: In function 'cbf_decompress_nibble_offset': /build/cbflib-0.9.7+dfsg1/src/cbf_nibble_offset.c:1396:45: warning: right shift count >= width of type [-Wshift-count-overflow] 1396 | if ((((long)delta[0]>>32)&0xFFFFFFFFL)==0x80000000L&&(((long)delta[0]&0xFFFFFFFFl)==0L)) { | ^~ /build/cbflib-0.9.7+dfsg1/src/cbf_nibble_offset.c:1400:49: warning: right shift count >= width of type [-Wshift-count-overflow] 1400 | if ((((long)delta[0]>>32)&0x80000000L) == 0x80000000L) { | ^~ /build/cbflib-0.9.7+dfsg1/src/cbf_nibble_offset.c: In function 'cbf_compress_nibble_offset': /build/cbflib-0.9.7+dfsg1/src/cbf_nibble_offset.c:936:21: warning: 'dmode' may be used uninitialized [-Wmaybe-uninitialized] 936 | curmode = dmode[inrun]; | ~~~~~~~~^~~~~~~~~~~~~~ /build/cbflib-0.9.7+dfsg1/src/cbf_nibble_offset.c:579:13: note: 'dmode' declared here 579 | int dmode[CBF_NIBBLE_RUN],maxmode,minmode,newmode,nextmaxmode,tempmode; | ^~~~~ /build/cbflib-0.9.7+dfsg1/src/cbf_stx.c:828:26: warning: 'yytname' defined but not used [-Wunused-const-variable=] 828 | static const char *const yytname[] = | ^~~~~~~ /build/cbflib-0.9.7+dfsg1/src/cbf_ws.c: In function 'cbf_find_bracketstring': /build/cbflib-0.9.7+dfsg1/src/cbf_ws.c:1075:26: warning: array subscript -1 is outside array bounds of 'int[536870911]' [-Warray-bounds] 1075 | tokentype[depth-1]= *stringtype; | ~~~~~~~~~^~~~~~~~~ gcc -o /build/cbflib-0.9.7+dfsg1/solib/libcbf.so *.o -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname -Wl,libcbf.so.1 -lm -L/usr/lib/i386-linux-gnu/hdf5/serial -lhdf5 rm -f *.o (cd /build/cbflib-0.9.7+dfsg1/m4; m4 -P -Dfcb_bytes_in_rec=131072 fcb_exit_binary.m4) > /build/cbflib-0.9.7+dfsg1/src/fcb_exit_binary.f90 (cd /build/cbflib-0.9.7+dfsg1/m4; m4 -P -Dfcb_bytes_in_rec=131072 fcb_next_binary.m4) > /build/cbflib-0.9.7+dfsg1/src/fcb_next_binary.f90 (cd /build/cbflib-0.9.7+dfsg1/m4; m4 -P -Dfcb_bytes_in_rec=131072 fcb_open_cifin.m4) > /build/cbflib-0.9.7+dfsg1/src/fcb_open_cifin.f90 (cd /build/cbflib-0.9.7+dfsg1/m4; m4 -P -Dfcb_bytes_in_rec=131072 fcb_packed.m4) > /build/cbflib-0.9.7+dfsg1/src/fcb_packed.f90 (cd /build/cbflib-0.9.7+dfsg1/m4; m4 -P -Dfcb_bytes_in_rec=131072 fcb_read_bits.m4) > /build/cbflib-0.9.7+dfsg1/src/fcb_read_bits.f90 (cd /build/cbflib-0.9.7+dfsg1/m4; m4 -P -Dfcb_bytes_in_rec=131072 fcb_read_image.m4) > /build/cbflib-0.9.7+dfsg1/src/fcb_read_image.f90 (cd /build/cbflib-0.9.7+dfsg1/m4; m4 -P -Dfcb_bytes_in_rec=131072 fcb_read_xds_i2.m4) > /build/cbflib-0.9.7+dfsg1/src/fcb_read_xds_i2.f90 chmod a+x .symlinks chmod a+x .undosymlinks chmod a+x doc/.symlinks chmod a+x doc/.undosymlinks ./.symlinks --use_ln touch symlinksdone rm -f /build/cbflib-0.9.7+dfsg1/lib/libcbf.a rm -f *.o mkdir -p /build/cbflib-0.9.7+dfsg1/lib gcc -g -O2 -ffile-prefix-map=/build/cbflib-0.9.7+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -Wall -D_USE_XOPEN_EXTENDED -fno-strict-aliasing -DCBF_REGEXLIB_REGEX \ -DCBF_FILTER_STATIC -I/build/cbflib-0.9.7+dfsg1/include -I/build/cbflib-0.9.7+dfsg1/src -I/usr/include/hdf5/serial -c /build/cbflib-0.9.7+dfsg1/src/cbf.c /build/cbflib-0.9.7+dfsg1/src/cbf_airy_disk.c /build/cbflib-0.9.7+dfsg1/src/cbf_alloc.c /build/cbflib-0.9.7+dfsg1/src/cbf_ascii.c /build/cbflib-0.9.7+dfsg1/src/cbf_binary.c /build/cbflib-0.9.7+dfsg1/src/cbf_byte_offset.c /build/cbflib-0.9.7+dfsg1/src/cbf_canonical.c /build/cbflib-0.9.7+dfsg1/src/cbf_codes.c /build/cbflib-0.9.7+dfsg1/src/cbf_compress.c /build/cbflib-0.9.7+dfsg1/src/cbf_context.c /build/cbflib-0.9.7+dfsg1/src/cbf_copy.c /build/cbflib-0.9.7+dfsg1/src/cbf_file.c /build/cbflib-0.9.7+dfsg1/src/cbf_getopt.c /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5_filter.c /build/cbflib-0.9.7+dfsg1/src/cbf_lex.c /build/cbflib-0.9.7+dfsg1/src/cbf_minicbf_header.c /build/cbflib-0.9.7+dfsg1/src/cbf_nibble_offset.c /build/cbflib-0.9.7+dfsg1/src/cbf_packed.c /build/cbflib-0.9.7+dfsg1/src/cbf_predictor.c /build/cbflib-0.9.7+dfsg1/src/cbf_read_binary.c /build/cbflib-0.9.7+dfsg1/src/cbf_read_mime.c /build/cbflib-0.9.7+dfsg1/src/cbf_simple.c /build/cbflib-0.9.7+dfsg1/src/cbf_string.c /build/cbflib-0.9.7+dfsg1/src/cbf_stx.c /build/cbflib-0.9.7+dfsg1/src/cbf_tree.c /build/cbflib-0.9.7+dfsg1/src/cbf_uncompressed.c /build/cbflib-0.9.7+dfsg1/src/cbf_write.c /build/cbflib-0.9.7+dfsg1/src/cbf_write_binary.c /build/cbflib-0.9.7+dfsg1/src/cbf_ws.c /build/cbflib-0.9.7+dfsg1/src/cbff.c /build/cbflib-0.9.7+dfsg1/src/md5c.c /build/cbflib-0.9.7+dfsg1/src/img.c /build/cbflib-0.9.7+dfsg1/src/fgetln.c /build/cbflib-0.9.7+dfsg1/src/cbf.c: In function 'cbf_select_saveframe': /build/cbflib-0.9.7+dfsg1/src/cbf.c:2498:3: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 2498 | if (!handle) | ^~ In file included from /build/cbflib-0.9.7+dfsg1/src/cbf.c:256: /build/cbflib-0.9.7+dfsg1/include/cbf.h:895:24: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 895 | #define cbf_failnez(f) { int err; err = (f); if (err) return err; } | ^ /build/cbflib-0.9.7+dfsg1/src/cbf.c:2505:5: note: in expansion of macro 'cbf_failnez' 2505 | cbf_failnez (cbf_find_parent (&node, handle->node, CBF_DATABLOCK)) | ^~~~~~~~~~~ /build/cbflib-0.9.7+dfsg1/src/cbf_codes.c: In function 'cbf_frombase32k': /build/cbflib-0.9.7+dfsg1/src/cbf_codes.c:1357:16: warning: '*enc' may be used uninitialized [-Wmaybe-uninitialized] 1357 | if((enc[0] == '\xFF' && enc[1] == '\xFE' && cbf_isBigEndian() == 0) || (enc[0] == '\xFE' && enc[1] == '\xFF' && cbf_isBigEndian() !=0)) | ~~~^~~ /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c: In function 'cbf_configParse_extractVector': /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4361:17: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 4361 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",*ln); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~ | | | size_t {aka unsigned int} /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4361:17: note: in definition of macro 'REQUIRE_NOT_EOL' 4361 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",*ln); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4361:49: note: format string is defined here 4361 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",*ln); \ | ~~^ | | | long unsigned int | %u /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4361:17: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 4361 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",*ln); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~ | | | size_t {aka unsigned int} /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4361:17: note: in definition of macro 'REQUIRE_NOT_EOL' 4361 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",*ln); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4361:49: note: format string is defined here 4361 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",*ln); \ | ~~^ | | | long unsigned int | %u /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4375:61: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 4375 | fprintf(logFile,"Config parsing error on line %lu: expected a number, got '%s'\n",*ln,*buf); | ~~^ ~~~ | | | | long unsigned int size_t {aka unsigned int} | %u /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4361:17: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 4361 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",*ln); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~ | | | size_t {aka unsigned int} /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4361:17: note: in definition of macro 'REQUIRE_NOT_EOL' 4361 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",*ln); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4361:49: note: format string is defined here 4361 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",*ln); \ | ~~^ | | | long unsigned int | %u /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4383:61: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 4383 | fprintf(logFile,"Config parsing error on line %lu: expected a number, got '%s'\n",*ln,*buf); | ~~^ ~~~ | | | | long unsigned int size_t {aka unsigned int} | %u /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4361:17: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 4361 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",*ln); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~ | | | size_t {aka unsigned int} /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4361:17: note: in definition of macro 'REQUIRE_NOT_EOL' 4361 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",*ln); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4361:49: note: format string is defined here 4361 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",*ln); \ | ~~^ | | | long unsigned int | %u /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4391:61: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 4391 | fprintf(logFile,"Config parsing error on line %lu: expected a number, got '%s'\n",*ln,*buf); | ~~^ ~~~ | | | | long unsigned int size_t {aka unsigned int} | %u /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4361:17: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 4361 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",*ln); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~ | | | size_t {aka unsigned int} /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4361:17: note: in definition of macro 'REQUIRE_NOT_EOL' 4361 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",*ln); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4361:49: note: format string is defined here 4361 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",*ln); \ | ~~^ | | | long unsigned int | %u /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c: In function 'cbf_config_parse': /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4456:17: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 4456 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ | | | size_t {aka unsigned int} /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4456:17: note: in definition of macro 'REQUIRE_NOT_EOL' 4456 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4456:49: note: format string is defined here 4456 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \ | ~~^ | | | long unsigned int | %u /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4489:69: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 4489 | fprintf(logFile,"Config parsing error on line %lu: Duplicate axis definition for minicbf axis '%s'\n",ln,tkn); | ~~^ ~~ | | | | long unsigned int size_t {aka unsigned int} | %u /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4456:17: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 4456 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ | | | size_t {aka unsigned int} /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4456:17: note: in definition of macro 'REQUIRE_NOT_EOL' 4456 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4456:49: note: format string is defined here 4456 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \ | ~~^ | | | long unsigned int | %u /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4440:17: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 4440 | fprintf(logFile,"Config parsing error on line %lu: expected " #TKN ", got '%s'\n",ln,tkn); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ | | | size_t {aka unsigned int} /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4440:17: note: in definition of macro 'REQUIRE_TOKEN' 4440 | fprintf(logFile,"Config parsing error on line %lu: expected " #TKN ", got '%s'\n",ln,tkn); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4456:17: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 4456 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ | | | size_t {aka unsigned int} /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4456:17: note: in definition of macro 'REQUIRE_NOT_EOL' 4456 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4456:49: note: format string is defined here 4456 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \ | ~~^ | | | long unsigned int | %u /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4502:69: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 4502 | fprintf(logFile,"Config parsing error on line %lu: Duplicate axis definition for Nexus axis '%s'\n",ln,tkn); | ~~^ ~~ | | | | long unsigned int size_t {aka unsigned int} | %u /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4448:17: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 4448 | fprintf(logFile,"Config parsing error on line %lu: expected '\\n', got '%s'\n",ln,tkn); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ | | | size_t {aka unsigned int} /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4448:17: note: in definition of macro 'REQUIRE_EOL' 4448 | fprintf(logFile,"Config parsing error on line %lu: expected '\\n', got '%s'\n",ln,tkn); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4448:49: note: format string is defined here 4448 | fprintf(logFile,"Config parsing error on line %lu: expected '\\n', got '%s'\n",ln,tkn); \ | ~~^ | | | long unsigned int | %u /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4456:17: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 4456 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ | | | size_t {aka unsigned int} /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4456:17: note: in definition of macro 'REQUIRE_NOT_EOL' 4456 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4456:49: note: format string is defined here 4456 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \ | ~~^ | | | long unsigned int | %u /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4440:17: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 4440 | fprintf(logFile,"Config parsing error on line %lu: expected " #TKN ", got '%s'\n",ln,tkn); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ | | | size_t {aka unsigned int} /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4440:17: note: in definition of macro 'REQUIRE_TOKEN' 4440 | fprintf(logFile,"Config parsing error on line %lu: expected " #TKN ", got '%s'\n",ln,tkn); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4456:17: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 4456 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ | | | size_t {aka unsigned int} /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4456:17: note: in definition of macro 'REQUIRE_NOT_EOL' 4456 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4456:49: note: format string is defined here 4456 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \ | ~~^ | | | long unsigned int | %u /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4464:17: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 4464 | fprintf(logFile,"Config parsing error on line %lu: Nexus axis '%s' not defined\n",ln,tkn); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ | | | size_t {aka unsigned int} /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4464:17: note: in definition of macro 'REQUIRE_NEXUS_AXIS' 4464 | fprintf(logFile,"Config parsing error on line %lu: Nexus axis '%s' not defined\n",ln,tkn); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4464:49: note: format string is defined here 4464 | fprintf(logFile,"Config parsing error on line %lu: Nexus axis '%s' not defined\n",ln,tkn); \ | ~~^ | | | long unsigned int | %u /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4448:17: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 4448 | fprintf(logFile,"Config parsing error on line %lu: expected '\\n', got '%s'\n",ln,tkn); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ | | | size_t {aka unsigned int} /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4448:17: note: in definition of macro 'REQUIRE_EOL' 4448 | fprintf(logFile,"Config parsing error on line %lu: expected '\\n', got '%s'\n",ln,tkn); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4448:49: note: format string is defined here 4448 | fprintf(logFile,"Config parsing error on line %lu: expected '\\n', got '%s'\n",ln,tkn); \ | ~~^ | | | long unsigned int | %u /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4527:69: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 4527 | fprintf(logFile,"Config parsing error on line %lu: Nexus axis '%s' not defined\n",ln,tkn); | ~~^ ~~ | | | | long unsigned int size_t {aka unsigned int} | %u /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4456:17: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 4456 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ | | | size_t {aka unsigned int} /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4456:17: note: in definition of macro 'REQUIRE_NOT_EOL' 4456 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4456:49: note: format string is defined here 4456 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \ | ~~^ | | | long unsigned int | %u /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4456:17: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 4456 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ | | | size_t {aka unsigned int} /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4456:17: note: in definition of macro 'REQUIRE_NOT_EOL' 4456 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4456:49: note: format string is defined here 4456 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \ | ~~^ | | | long unsigned int | %u /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4464:17: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 4464 | fprintf(logFile,"Config parsing error on line %lu: Nexus axis '%s' not defined\n",ln,tkn); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ | | | size_t {aka unsigned int} /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4464:17: note: in definition of macro 'REQUIRE_NEXUS_AXIS' 4464 | fprintf(logFile,"Config parsing error on line %lu: Nexus axis '%s' not defined\n",ln,tkn); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4464:49: note: format string is defined here 4464 | fprintf(logFile,"Config parsing error on line %lu: Nexus axis '%s' not defined\n",ln,tkn); \ | ~~^ | | | long unsigned int | %u /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4448:17: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 4448 | fprintf(logFile,"Config parsing error on line %lu: expected '\\n', got '%s'\n",ln,tkn); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ | | | size_t {aka unsigned int} /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4448:17: note: in definition of macro 'REQUIRE_EOL' 4448 | fprintf(logFile,"Config parsing error on line %lu: expected '\\n', got '%s'\n",ln,tkn); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4448:49: note: format string is defined here 4448 | fprintf(logFile,"Config parsing error on line %lu: expected '\\n', got '%s'\n",ln,tkn); \ | ~~^ | | | long unsigned int | %u /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4456:17: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 4456 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ | | | size_t {aka unsigned int} /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4456:17: note: in definition of macro 'REQUIRE_NOT_EOL' 4456 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4456:49: note: format string is defined here 4456 | fprintf(logFile,"Config parsing error on line %lu: unexpected newline\n",ln); \ | ~~^ | | | long unsigned int | %u /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4464:17: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 4464 | fprintf(logFile,"Config parsing error on line %lu: Nexus axis '%s' not defined\n",ln,tkn); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ | | | size_t {aka unsigned int} /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4464:17: note: in definition of macro 'REQUIRE_NEXUS_AXIS' 4464 | fprintf(logFile,"Config parsing error on line %lu: Nexus axis '%s' not defined\n",ln,tkn); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4464:49: note: format string is defined here 4464 | fprintf(logFile,"Config parsing error on line %lu: Nexus axis '%s' not defined\n",ln,tkn); \ | ~~^ | | | long unsigned int | %u /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4448:17: warning: format '%lu' expects argument of type 'long unsigned int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 4448 | fprintf(logFile,"Config parsing error on line %lu: expected '\\n', got '%s'\n",ln,tkn); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ | | | size_t {aka unsigned int} /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4448:17: note: in definition of macro 'REQUIRE_EOL' 4448 | fprintf(logFile,"Config parsing error on line %lu: expected '\\n', got '%s'\n",ln,tkn); \ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:4448:49: note: format string is defined here 4448 | fprintf(logFile,"Config parsing error on line %lu: expected '\\n', got '%s'\n",ln,tkn); \ | ~~^ | | | long unsigned int | %u /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c: In function 'cbf_write_nx2cbf__entry_op': /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:21473:31: warning: unused variable 'nxpdb_found' [-Wunused-variable] 21473 | const int nxpdb_found = _cbf_Attrval(object,"NXpdb_class", &NXpdb_class); | ^~~~~~~~~~~ /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c: In function 'cbf_write_nx2cbf': /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:22527:25: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 22527 | if (pixel_offset_name[i]) free((void*)pixel_offset_name[i]);pixel_offset_name[i]=NULL; | ^~ /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:22527:85: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 22527 | if (pixel_offset_name[i]) free((void*)pixel_offset_name[i]);pixel_offset_name[i]=NULL; | ^~~~~~~~~~~~~~~~~ /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:22528:25: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 22528 | if (pixel_offset_long_name[i]) free((void*)pixel_offset_long_name[i]);pixel_offset_long_name[i]=NULL; | ^~ /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:22528:95: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 22528 | if (pixel_offset_long_name[i]) free((void*)pixel_offset_long_name[i]);pixel_offset_long_name[i]=NULL; | ^~~~~~~~~~~~~~~~~~~~~~ /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:22529:25: warning: this 'if' clause does not guard... [-Wmisleading-indentation] 22529 | if (pixel_size_name[i]) free((void*)pixel_size_name[i]);pixel_size_name[i]=NULL; | ^~ /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:22529:81: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if' 22529 | if (pixel_size_name[i]) free((void*)pixel_size_name[i]);pixel_size_name[i]=NULL; | ^~~~~~~~~~~~~~~ /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c: In function 'cbf_h5ds_store_as_column': /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:28703:16: warning: unused variable 'byte_order' [-Wunused-variable] 28703 | char * byte_order; | ^~~~~~~~~~ /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:28681:14: warning: unused variable 'buffer' [-Wunused-variable] 28681 | char buffer[25]; | ^~~~~~ /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c: In function 'cbf_object_visit': /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:30485:36: warning: unused variable 'atnexus' [-Wunused-variable] 30485 | int save_innexus, innexus, atnexus; /* within or at NXentry */ | ^~~~~~~ /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c: In function 'cbf_read_h5file_group': /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:31721:13: warning: unused variable 'errorcode' [-Wunused-variable] 31721 | int errorcode = 0; | ^~~~~~~~~ /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:31717:19: warning: unused variable 'node' [-Wunused-variable] 31717 | cbf_node *node; | ^~~~ /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c: At top level: /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:9141:16: warning: 'cbf_require_nxdetectors' defined but not used [-Wunused-function] 9141 | static int cbf_require_nxdetectors(const cbf_handle handle, | ^~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:906, from /usr/include/hdf5/serial/H5Epublic.h:20, from /usr/include/hdf5/serial/hdf5.h:26, from /build/cbflib-0.9.7+dfsg1/include/cbf.h:253, from /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:258: In function 'sprintf', inlined from 'cbf_H5Dread_element_as_string' at /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:3440:21: /usr/include/i386-linux-gnu/bits/stdio2.h:30:10: warning: argument 1 null where non-null expected [-Wnonnull] 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /usr/include/i386-linux-gnu/bits/stdio2.h:30:10: note: in a call to built-in function '__builtin___sprintf_chk' /usr/include/i386-linux-gnu/bits/stdio2.h:30:10: warning: null destination pointer [-Wformat-overflow=] /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c: In function 'cbf_add_h5text_dataset_slab': /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:13579:29: warning: 'anondataset' may be used uninitialized [-Wmaybe-uninitialized] 13579 | cbf_h5reportneg(H5Olink(anondataset,hid,datasetname,H5P_DEFAULT,H5P_DEFAULT), CBF_FORMAT, errorcode); | ^~~~~~~ /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:13399:15: note: 'anondataset' was declared here 13399 | hid_t anondataset; | ^~~~~~~~~~~ /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c: In function 'cbf_require_h5text_dataset_slab': /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:13190:47: warning: 'anondataset' may be used uninitialized [-Wmaybe-uninitialized] 13190 | if (anondataset >= 0) H5Dclose(anondataset); | ^~~~~~~~~~~~~~~~~~~~~ /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:13050:15: note: 'anondataset' was declared here 13050 | hid_t anondataset; | ^~~~~~~~~~~ /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c: In function 'cbf_write_h5category': /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:16861:30: warning: 'row' may be used uninitialized [-Wmaybe-uninitialized] 16861 | cbf_failnez (cbf_get_columnrow (&text, category->child [column], row)); | ^~~~~~~~~~~~~~~~~ /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:15949:30: note: 'row' was declared here 15949 | unsigned int column, row; | ^~~ /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c: In function 'cbf_create_h5handle2': /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:17990:28: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 17990 | svnrev[ii] = '\0'; | ~~~~~~~~~~~^~~~~~ /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:17956:14: note: at offset -1 into destination object 'svnrev' of size 12 17956 | char svnrev[] = CBF_SVN_REVISION_STRING; | ^~~~~~ /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:18018:9: warning: '__builtin___strncat_chk' output may be truncated copying 10 bytes from a string of length 11 [-Wstringop-truncation] 18018 | strncat(buffer,svnrev+irev,10); | ^ /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:18020:9: warning: '__builtin___strncat_chk' output may be truncated copying 50 bytes from a string of length 53 [-Wstringop-truncation] 18020 | strncat(buffer,svndate+idate,50); | ^ /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c: In function 'cbf_create_h5handle2u': /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:18072:28: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 18072 | svnrev[ii] = '\0'; | ~~~~~~~~~~~^~~~~~ /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:18038:14: note: at offset -1 into destination object 'svnrev' of size 12 18038 | char svnrev[] = CBF_SVN_REVISION_STRING; | ^~~~~~ /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:18100:9: warning: '__builtin___strncat_chk' output may be truncated copying 10 bytes from a string of length 11 [-Wstringop-truncation] 18100 | strncat(buffer,svnrev+irev,10); | ^ /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5.c:18102:9: warning: '__builtin___strncat_chk' output may be truncated copying 50 bytes from a string of length 53 [-Wstringop-truncation] 18102 | strncat(buffer,svndate+idate,50); | ^ /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5_filter.c: In function 'cbf_h5z_filter': /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5_filter.c:799:71: warning: format '%ld' expects argument of type 'long int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 799 | sprintf (text, "X-Binary-Element-Type: \"signed %ld-bit real IEEE\"\n", | ~~^ | | | long int | %d /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5_filter.c:803:75: warning: format '%ld' expects argument of type 'long int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 803 | sprintf (text, "X-Binary-Element-Type: \"signed %ld-bit integer\"\n", | ~~^ | | | long int | %d /build/cbflib-0.9.7+dfsg1/src/cbf_hdf5_filter.c:806:77: warning: format '%ld' expects argument of type 'long int', but argument 3 has type 'size_t' {aka 'unsigned int'} [-Wformat=] 806 | sprintf (text, "X-Binary-Element-Type: \"unsigned %ld-bit integer\"\n", | ~~^ | | | long int | %d /build/cbflib-0.9.7+dfsg1/src/cbf_minicbf_header.c: In function 'cbf_append_string.part.0': /build/cbflib-0.9.7+dfsg1/src/cbf_minicbf_header.c:325:9: warning: '__builtin_strncpy' output truncated before terminating nul copying as many bytes from a string as its length [-Wstringop-truncation] 325 | strncpy(*dst,src,srclen); | ^ /build/cbflib-0.9.7+dfsg1/src/cbf_minicbf_header.c:302:18: note: length computed here 302 | srclen = strlen(src); | ^~~~~~~~~~~ /build/cbflib-0.9.7+dfsg1/src/cbf_minicbf_header.c: In function 'cbf_set_minicbf_header': /build/cbflib-0.9.7+dfsg1/src/cbf_minicbf_header.c:325:9: warning: '__builtin_strncpy' output truncated before terminating nul copying 1 byte from a string of the same length [-Wstringop-truncation] 325 | strncpy(*dst,src,srclen); | ^ /build/cbflib-0.9.7+dfsg1/src/cbf_nibble_offset.c: In function 'cbf_decompress_nibble_offset': /build/cbflib-0.9.7+dfsg1/src/cbf_nibble_offset.c:1396:45: warning: right shift count >= width of type [-Wshift-count-overflow] 1396 | if ((((long)delta[0]>>32)&0xFFFFFFFFL)==0x80000000L&&(((long)delta[0]&0xFFFFFFFFl)==0L)) { | ^~ /build/cbflib-0.9.7+dfsg1/src/cbf_nibble_offset.c:1400:49: warning: right shift count >= width of type [-Wshift-count-overflow] 1400 | if ((((long)delta[0]>>32)&0x80000000L) == 0x80000000L) { | ^~ /build/cbflib-0.9.7+dfsg1/src/cbf_nibble_offset.c: In function 'cbf_compress_nibble_offset': /build/cbflib-0.9.7+dfsg1/src/cbf_nibble_offset.c:936:21: warning: 'dmode' may be used uninitialized [-Wmaybe-uninitialized] 936 | curmode = dmode[inrun]; | ~~~~~~~~^~~~~~~~~~~~~~ /build/cbflib-0.9.7+dfsg1/src/cbf_nibble_offset.c:579:13: note: 'dmode' declared here 579 | int dmode[CBF_NIBBLE_RUN],maxmode,minmode,newmode,nextmaxmode,tempmode; | ^~~~~ /build/cbflib-0.9.7+dfsg1/src/cbf_stx.c:828:26: warning: 'yytname' defined but not used [-Wunused-const-variable=] 828 | static const char *const yytname[] = | ^~~~~~~ /build/cbflib-0.9.7+dfsg1/src/cbf_ws.c: In function 'cbf_find_bracketstring': /build/cbflib-0.9.7+dfsg1/src/cbf_ws.c:1075:26: warning: array subscript -1 is outside array bounds of 'int[536870911]' [-Warray-bounds] 1075 | tokentype[depth-1]= *stringtype; | ~~~~~~~~~^~~~~~~~~ /usr/bin/ar cr /build/cbflib-0.9.7+dfsg1/lib/libcbf.a *.o /usr/bin/ranlib /build/cbflib-0.9.7+dfsg1/lib/libcbf.a rm -f *.o mkdir -p /build/cbflib-0.9.7+dfsg1/bin gcc -g -O2 -ffile-prefix-map=/build/cbflib-0.9.7+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -Wall -D_USE_XOPEN_EXTENDED -fno-strict-aliasing -Wl,-z,relro -Wl,-z,now -DCBF_REGEXLIB_REGEX -D_SVID_SOURCE -I/build/cbflib-0.9.7+dfsg1/include -I/build/cbflib-0.9.7+dfsg1/src -I/usr/include/hdf5/serial \ /build/cbflib-0.9.7+dfsg1/examples/adscimg2cbf.c /build/cbflib-0.9.7+dfsg1/examples/adscimg2cbf_sub.c -L/build/cbflib-0.9.7+dfsg1/lib \ -lcbf -lm -L/usr/lib/i386-linux-gnu/hdf5/serial -lhdf5 -o /build/cbflib-0.9.7+dfsg1/bin/adscimg2cbf In file included from /usr/include/i386-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from /build/cbflib-0.9.7+dfsg1/examples/adscimg2cbf.c:1: /usr/include/features.h:194:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 194 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ In file included from /usr/include/hdf5/serial/H5public.h:35, from /usr/include/hdf5/serial/hdf5.h:22, from /build/cbflib-0.9.7+dfsg1/include/cbf.h:253, from /build/cbflib-0.9.7+dfsg1/examples/adscimg2cbf_sub.c:177: /usr/include/features.h:194:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 194 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /build/cbflib-0.9.7+dfsg1/examples/adscimg2cbf_sub.c: In function 'gethd.constprop': /build/cbflib-0.9.7+dfsg1/examples/adscimg2cbf_sub.c:263:3: warning: '__builtin_strncpy' output truncated before terminating nul copying as many bytes from a string as its length [-Wstringop-truncation] 263 | strncpy (newfield+1, field, l); | ^ /build/cbflib-0.9.7+dfsg1/examples/adscimg2cbf_sub.c:260:7: note: length computed here 260 | l = strlen (field); | ^~~~~~~~~~~~~~ /build/cbflib-0.9.7+dfsg1/examples/adscimg2cbf_sub.c: In function 'adscimg2cbf_sub2': /build/cbflib-0.9.7+dfsg1/examples/adscimg2cbf_sub.c:591:29: warning: '; ' directive writing 2 bytes into a region of size between 0 and 1023 [-Wformat-overflow=] 591 | sprintf(temp, "%s=%s;\n", s, s1); | ^~~ In file included from /usr/include/stdio.h:906, from /usr/include/hdf5/serial/H5Epublic.h:20, from /usr/include/hdf5/serial/hdf5.h:26: In function 'sprintf', inlined from 'adscimg2cbf_sub2' at /build/cbflib-0.9.7+dfsg1/examples/adscimg2cbf_sub.c:591:9: /usr/include/i386-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output 4 or more bytes (assuming 1027) into a destination of size 1024 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ /build/cbflib-0.9.7+dfsg1/examples/adscimg2cbf_sub.c: In function 'adscimg2cbf_sub2': /build/cbflib-0.9.7+dfsg1/examples/adscimg2cbf_sub.c:1842:53: warning: 'smooth_data_as_int' may be used uninitialized [-Wmaybe-uninitialized] 1842 | if (kj > 0 && smooth_data_as_int[ki*(1+fasthigh-fastlow+fastpadlow+fastpadhigh)/(bin+1)+kj-1] | ^ /build/cbflib-0.9.7+dfsg1/examples/adscimg2cbf_sub.c:526:14: note: 'smooth_data_as_int' was declared here 526 | int *smooth_data_as_int; | ^~~~~~~~~~~~~~~~~~ mkdir -p /build/cbflib-0.9.7+dfsg1/bin gcc -g -O2 -ffile-prefix-map=/build/cbflib-0.9.7+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -Wall -D_USE_XOPEN_EXTENDED -fno-strict-aliasing -Wl,-z,relro -Wl,-z,now -DCBF_REGEXLIB_REGEX -I/build/cbflib-0.9.7+dfsg1/include -I/build/cbflib-0.9.7+dfsg1/src -I/usr/include/hdf5/serial \ /build/cbflib-0.9.7+dfsg1/examples/arvai_test.c -L/build/cbflib-0.9.7+dfsg1/lib \ -lcbf -lm -L/usr/lib/i386-linux-gnu/hdf5/serial -lhdf5 -o /build/cbflib-0.9.7+dfsg1/bin/arvai_test /build/cbflib-0.9.7+dfsg1/examples/arvai_test.c: In function 'main': /build/cbflib-0.9.7+dfsg1/examples/arvai_test.c:62:12: warning: pointer 'data_buffer' used after 'free' [-Wuse-after-free] 62 | ierr = cbf_read_buffered_file (cbf, NULL, MSG_DIGESTNOW, data_buffer, data_buffer_len); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /build/cbflib-0.9.7+dfsg1/examples/arvai_test.c:59:9: note: call to 'free' here 59 | free((void *)data_buffer); | ^~~~~~~~~~~~~~~~~~~~~~~~~ mkdir -p /build/cbflib-0.9.7+dfsg1/bin gcc -g -O2 -ffile-prefix-map=/build/cbflib-0.9.7+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -Wall -D_USE_XOPEN_EXTENDED -fno-strict-aliasing -Wl,-z,relro -Wl,-z,now -DCBF_REGEXLIB_REGEX -D_SVID_SOURCE -I/build/cbflib-0.9.7+dfsg1/include -I/build/cbflib-0.9.7+dfsg1/src -I/usr/include/hdf5/serial \ /build/cbflib-0.9.7+dfsg1/examples/cbf2adscimg.c /build/cbflib-0.9.7+dfsg1/examples/cbf2adscimg_sub.c -L/build/cbflib-0.9.7+dfsg1/lib \ -lcbf -lm -L/usr/lib/i386-linux-gnu/hdf5/serial -lhdf5 -o /build/cbflib-0.9.7+dfsg1/bin/cbf2adscimg In file included from /usr/include/i386-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from /build/cbflib-0.9.7+dfsg1/examples/cbf2adscimg.c:1: /usr/include/features.h:194:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 194 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /build/cbflib-0.9.7+dfsg1/examples/cbf2adscimg.c: In function 'gethd': /build/cbflib-0.9.7+dfsg1/examples/cbf2adscimg.c:21:3: warning: '__builtin_strncpy' output truncated before terminating nul copying as many bytes from a string as its length [-Wstringop-truncation] 21 | strncpy (newfield+1, field, l); | ^ /build/cbflib-0.9.7+dfsg1/examples/cbf2adscimg.c:18:7: note: length computed here 18 | l = strlen (field); | ^~~~~~~~~~~~~~ In file included from /usr/include/hdf5/serial/H5public.h:35, from /usr/include/hdf5/serial/hdf5.h:22, from /build/cbflib-0.9.7+dfsg1/include/cbf.h:253, from /build/cbflib-0.9.7+dfsg1/examples/cbf2adscimg_sub.c:126: /usr/include/features.h:194:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 194 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /build/cbflib-0.9.7+dfsg1/examples/cbf2adscimg_sub.c: In function 'padhd': /build/cbflib-0.9.7+dfsg1/examples/cbf2adscimg_sub.c:217:3: warning: this 'for' clause does not guard... [-Wmisleading-indentation] 217 | for ( hp=header; *hp != '}'; hp++); hp++; | ^~~ /build/cbflib-0.9.7+dfsg1/examples/cbf2adscimg_sub.c:217:39: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for' 217 | for ( hp=header; *hp != '}'; hp++); hp++; | ^~ mkdir -p /build/cbflib-0.9.7+dfsg1/bin gcc -g -O2 -ffile-prefix-map=/build/cbflib-0.9.7+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -Wall -D_USE_XOPEN_EXTENDED -fno-strict-aliasing -Wl,-z,relro -Wl,-z,now -DCBF_REGEXLIB_REGEX -I/build/cbflib-0.9.7+dfsg1/include -I/build/cbflib-0.9.7+dfsg1/src -I/usr/include/hdf5/serial \ /build/cbflib-0.9.7+dfsg1/examples/cbf2nexus.c -L/build/cbflib-0.9.7+dfsg1/lib \ -lcbf -lm -L/usr/lib/i386-linux-gnu/hdf5/serial -lhdf5 \ -o /build/cbflib-0.9.7+dfsg1/bin/cbf2nexus mkdir -p /build/cbflib-0.9.7+dfsg1/bin g -O2 -ffile-prefix-map=/build/cbflib-0.9.7+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -Wall -D_USE_XOPEN_EXTENDED -fno-strict-aliasing -Wl,-z,relro -Wl,-z,now -DCBF_REGEXLIB_REGEX -I/build/cbflib-0.9.7+dfsg1/include -I/build/cbflib-0.9.7+dfsg1/src -I/usr/include/hdf5/serial \ /build/cbflib-0.9.7+dfsg1/examples/cif2c.c -L/build/cbflib-0.9.7+dfsg1/lib \ -lcbf -lm -L/usr/lib/i386-linux-gnu/hdf5/serial -lhdf5 -o /build/cbflib-0.9.7+dfsg1/bin/cif2c bash: line 1: g: command not found make[2]: [Makefile:2082: /build/cbflib-0.9.7+dfsg1/bin/cif2c] Error 127 (ignored) mkdir -p /build/cbflib-0.9.7+dfsg1/bin gcc -g -O2 -ffile-prefix-map=/build/cbflib-0.9.7+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -Wall -D_USE_XOPEN_EXTENDED -fno-strict-aliasing -Wl,-z,relro -Wl,-z,now -DCBF_REGEXLIB_REGEX -I/build/cbflib-0.9.7+dfsg1/include -I/build/cbflib-0.9.7+dfsg1/src -I/usr/include/hdf5/serial \ /build/cbflib-0.9.7+dfsg1/examples/cif2cbf.c -L/build/cbflib-0.9.7+dfsg1/lib \ -lcbf -lm -L/usr/lib/i386-linux-gnu/hdf5/serial -lhdf5 -o /build/cbflib-0.9.7+dfsg1/bin/cif2cbf /build/cbflib-0.9.7+dfsg1/examples/cif2cbf.c: In function 'main': /build/cbflib-0.9.7+dfsg1/examples/cif2cbf.c:2015:25: warning: '__builtin_strncpy' specified bound depends on the length of the source argument [-Wstringop-truncation] 2015 | strncpy(ndatablock_name+ndbsz-dbsz,db+idb,dbsz); | ^ /build/cbflib-0.9.7+dfsg1/examples/cif2cbf.c:2012:28: note: length computed here 2012 | dbsz = strlen(datablock_name+idb); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ mkdir -p /build/cbflib-0.9.7+dfsg1/bin gcc -g -O2 -ffile-prefix-map=/build/cbflib-0.9.7+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -Wall -D_USE_XOPEN_EXTENDED -fno-strict-aliasing -Wl,-z,relro -Wl,-z,now -DCBF_REGEXLIB_REGEX -D_SVID_SOURCE -I/build/cbflib-0.9.7+dfsg1/include -I/build/cbflib-0.9.7+dfsg1/src -I/usr/include/hdf5/serial \ /build/cbflib-0.9.7+dfsg1/examples/cbf_standardize_numbers.c /build/cbflib-0.9.7+dfsg1/src/fgetln.c -lm -o /build/cbflib-0.9.7+dfsg1/bin/cbf_standardize_numbers In file included from /usr/include/hdf5/serial/H5public.h:35, from /usr/include/hdf5/serial/hdf5.h:22, from /build/cbflib-0.9.7+dfsg1/include/cbf.h:253, from /build/cbflib-0.9.7+dfsg1/examples/cbf_standardize_numbers.c:9: /usr/include/features.h:194:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 194 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ /build/cbflib-0.9.7+dfsg1/examples/cbf_standardize_numbers.c: In function 'main': /build/cbflib-0.9.7+dfsg1/examples/cbf_standardize_numbers.c:61:24: warning: '%d' directive writing between 1 and 10 bytes into a region of size 8 [-Wformat-overflow=] 61 | sprintf(format,"%%.%dg ",(digits>0)?digits+1:0); | ^~ /build/cbflib-0.9.7+dfsg1/examples/cbf_standardize_numbers.c:61:20: note: directive argument in the range [0, 2147483647] 61 | sprintf(format,"%%.%dg ",(digits>0)?digits+1:0); | ^~~~~~~~~ In file included from /usr/include/stdio.h:906, from /usr/include/hdf5/serial/H5Epublic.h:20, from /usr/include/hdf5/serial/hdf5.h:26: In function 'sprintf', inlined from 'main' at /build/cbflib-0.9.7+dfsg1/examples/cbf_standardize_numbers.c:61:5: /usr/include/i386-linux-gnu/bits/stdio2.h:30:10: note: '__builtin___sprintf_chk' output between 6 and 15 bytes into a destination of size 10 30 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 | __glibc_objsize (__s), __fmt, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 32 | __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~ In file included from /usr/include/i386-linux-gnu/bits/libc-header-start.h:33, from /usr/include/stdio.h:27, from /build/cbflib-0.9.7+dfsg1/src/fgetln.c:30: /usr/include/features.h:194:3: warning: #warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" [-Wcpp] 194 | # warning "_BSD_SOURCE and _SVID_SOURCE are deprecated, use _DEFAULT_SOURCE" | ^~~~~~~ mkdir -p /build/cbflib-0.9.7+dfsg1/bin gcc -g -O2 -ffile-prefix-map=/build/cbflib-0.9.7+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -Wall -D_USE_XOPEN_EXTENDED -fno-strict-aliasing -Wl,-z,relro -Wl,-z,now -DCBF_REGEXLIB_REGEX -I/build/cbflib-0.9.7+dfsg1/include -I/build/cbflib-0.9.7+dfsg1/src -I/usr/include/hdf5/serial \ /build/cbflib-0.9.7+dfsg1/examples/convert_image.c /build/cbflib-0.9.7+dfsg1/src/img.c -L/build/cbflib-0.9.7+dfsg1/lib \ -lcbf -lm -L/usr/lib/i386-linux-gnu/hdf5/serial -lhdf5 -o /build/cbflib-0.9.7+dfsg1/bin/convert_image /build/cbflib-0.9.7+dfsg1/examples/convert_image.c: In function 'main': /build/cbflib-0.9.7+dfsg1/examples/convert_image.c:533:7: warning: variable 'transpose' set but not used [-Wunused-but-set-variable] 533 | int transpose; | ^~~~~~~~~ /usr/bin/ld: /tmp/cc0I0s0l.o: in function `main': ././examples/convert_image.c:672: warning: the use of `mktemp' is dangerous, better use `mkstemp' or `mkdtemp' mkdir -p /build/cbflib-0.9.7+dfsg1/bin gcc -g -O2 -ffile-prefix-map=/build/cbflib-0.9.7+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -Wall -D_USE_XOPEN_EXTENDED -fno-strict-aliasing -Wl,-z,relro -Wl,-z,now -DCBF_REGEXLIB_REGEX -I/build/cbflib-0.9.7+dfsg1/include -I/build/cbflib-0.9.7+dfsg1/src -I/usr/include/hdf5/serial \ /build/cbflib-0.9.7+dfsg1/examples/convert_minicbf.c -L/build/cbflib-0.9.7+dfsg1/lib \ -lcbf -lm -L/usr/lib/i386-linux-gnu/hdf5/serial -lhdf5 -o /build/cbflib-0.9.7+dfsg1/bin/convert_minicbf chmod 755 /build/cbflib-0.9.7+dfsg1/examples/batch_convert_minicbf.sh mkdir -p /build/cbflib-0.9.7+dfsg1/bin gcc -g -O2 -ffile-prefix-map=/build/cbflib-0.9.7+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -Wall -D_USE_XOPEN_EXTENDED -fno-strict-aliasing -Wl,-z,relro -Wl,-z,now -DCBF_REGEXLIB_REGEX -I/build/cbflib-0.9.7+dfsg1/include -I/build/cbflib-0.9.7+dfsg1/src -I/usr/include/hdf5/serial \ /build/cbflib-0.9.7+dfsg1/examples/img2cif.c -L/build/cbflib-0.9.7+dfsg1/lib \ -lcbf -lm -L/usr/lib/i386-linux-gnu/hdf5/serial -lhdf5 -o /build/cbflib-0.9.7+dfsg1/bin/img2cif mkdir -p /build/cbflib-0.9.7+dfsg1/bin gcc -g -O2 -ffile-prefix-map=/build/cbflib-0.9.7+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -Wall -D_USE_XOPEN_EXTENDED -fno-strict-aliasing -Wl,-z,relro -Wl,-z,now -DCBF_REGEXLIB_REGEX -I/build/cbflib-0.9.7+dfsg1/include -I/build/cbflib-0.9.7+dfsg1/src -I/usr/include/hdf5/serial \ /build/cbflib-0.9.7+dfsg1/examples/makecbf.c -L/build/cbflib-0.9.7+dfsg1/lib \ -lcbf -lm -L/usr/lib/i386-linux-gnu/hdf5/serial -lhdf5 -o /build/cbflib-0.9.7+dfsg1/bin/makecbf mkdir -p /build/cbflib-0.9.7+dfsg1/bin gcc -g -O2 -ffile-prefix-map=/build/cbflib-0.9.7+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -Wall -D_USE_XOPEN_EXTENDED -fno-strict-aliasing -Wl,-z,relro -Wl,-z,now -DCBF_REGEXLIB_REGEX -I/build/cbflib-0.9.7+dfsg1/include -I/build/cbflib-0.9.7+dfsg1/src -I/usr/include/hdf5/serial \ /build/cbflib-0.9.7+dfsg1/examples/minicbf2nexus.c -L/build/cbflib-0.9.7+dfsg1/lib \ -lcbf -lm -L/usr/lib/i386-linux-gnu/hdf5/serial -lhdf5 -o /build/cbflib-0.9.7+dfsg1/bin/minicbf2nexus mkdir -p /build/cbflib-0.9.7+dfsg1/bin gcc -g -O2 -ffile-prefix-map=/build/cbflib-0.9.7+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -Wall -D_USE_XOPEN_EXTENDED -fno-strict-aliasing -Wl,-z,relro -Wl,-z,now -DCBF_REGEXLIB_REGEX -I/build/cbflib-0.9.7+dfsg1/include -I/build/cbflib-0.9.7+dfsg1/src -I/usr/include/hdf5/serial \ /build/cbflib-0.9.7+dfsg1/examples/nexus2cbf.c -L/build/cbflib-0.9.7+dfsg1/lib \ -lcbf -lm -L/usr/lib/i386-linux-gnu/hdf5/serial -lhdf5 -o /build/cbflib-0.9.7+dfsg1/bin/nexus2cbf mkdir -p /build/cbflib-0.9.7+dfsg1/bin gcc -g -O2 -ffile-prefix-map=/build/cbflib-0.9.7+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -Wall -D_USE_XOPEN_EXTENDED -fno-strict-aliasing -Wl,-z,relro -Wl,-z,now -DCBF_REGEXLIB_REGEX -I/build/cbflib-0.9.7+dfsg1/include -I/build/cbflib-0.9.7+dfsg1/src -I/usr/include/hdf5/serial \ /build/cbflib-0.9.7+dfsg1/examples/roi_peaksearch.c /build/cbflib-0.9.7+dfsg1/examples/dps_peaksearch.c -L/build/cbflib-0.9.7+dfsg1/lib \ -lcbf -lm -L/usr/lib/i386-linux-gnu/hdf5/serial -lhdf5 -o /build/cbflib-0.9.7+dfsg1/bin/roi_peaksearch mkdir -p /build/cbflib-0.9.7+dfsg1/bin gcc -g -O2 -ffile-prefix-map=/build/cbflib-0.9.7+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -Wall -D_USE_XOPEN_EXTENDED -fno-strict-aliasing -Wl,-z,relro -Wl,-z,now -DCBF_REGEXLIB_REGEX -I/build/cbflib-0.9.7+dfsg1/include -I/build/cbflib-0.9.7+dfsg1/src -I/usr/include/hdf5/serial \ /build/cbflib-0.9.7+dfsg1/examples/sequence_match.c -L/build/cbflib-0.9.7+dfsg1/lib \ -lcbf -lm -L/usr/lib/i386-linux-gnu/hdf5/serial -lhdf5 -o /build/cbflib-0.9.7+dfsg1/bin/sequence_match mkdir -p /build/cbflib-0.9.7+dfsg1/bin g -O2 -ffile-prefix-map=/build/cbflib-0.9.7+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -Wall -D_USE_XOPEN_EXTENDED -fno-strict-aliasing -Wl,-z,relro -Wl,-z,now -DCBF_REGEXLIB_REGEX -I/build/cbflib-0.9.7+dfsg1/include -I/build/cbflib-0.9.7+dfsg1/src -I/usr/include/hdf5/serial \ /build/cbflib-0.9.7+dfsg1/examples/testcell.C -L/build/cbflib-0.9.7+dfsg1/lib \ -lcbf -lm -L/usr/lib/i386-linux-gnu/hdf5/serial -lhdf5 -o /build/cbflib-0.9.7+dfsg1/bin/testcell bash: line 1: g: command not found make[2]: [Makefile:2073: /build/cbflib-0.9.7+dfsg1/bin/testcell] Error 127 (ignored) mkdir -p /build/cbflib-0.9.7+dfsg1/bin gcc -g -O2 -ffile-prefix-map=/build/cbflib-0.9.7+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -Wall -D_USE_XOPEN_EXTENDED -fno-strict-aliasing -Wl,-z,relro -Wl,-z,now -DCBF_REGEXLIB_REGEX -I/build/cbflib-0.9.7+dfsg1/include -I/build/cbflib-0.9.7+dfsg1/src -I/usr/include/hdf5/serial \ /build/cbflib-0.9.7+dfsg1/examples/testalloc.c -L/build/cbflib-0.9.7+dfsg1/lib /build/cbflib-0.9.7+dfsg1/lib/libcbf.a \ -lm -o /build/cbflib-0.9.7+dfsg1/bin/testalloc.tmp mv /build/cbflib-0.9.7+dfsg1/bin/testalloc.tmp /build/cbflib-0.9.7+dfsg1/bin/testalloc mkdir -p /build/cbflib-0.9.7+dfsg1/bin gcc -g -O2 -ffile-prefix-map=/build/cbflib-0.9.7+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -Wall -D_USE_XOPEN_EXTENDED -fno-strict-aliasing -Wl,-z,relro -Wl,-z,now -DCBF_REGEXLIB_REGEX -I/build/cbflib-0.9.7+dfsg1/include -I/build/cbflib-0.9.7+dfsg1/src -I/usr/include/hdf5/serial \ /build/cbflib-0.9.7+dfsg1/examples/testreals.c -L/build/cbflib-0.9.7+dfsg1/lib \ -lcbf -lm -L/usr/lib/i386-linux-gnu/hdf5/serial -lhdf5 -o /build/cbflib-0.9.7+dfsg1/bin/testreals mkdir -p /build/cbflib-0.9.7+dfsg1/bin gcc -g -O2 -ffile-prefix-map=/build/cbflib-0.9.7+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -Wall -D_USE_XOPEN_EXTENDED -fno-strict-aliasing -Wl,-z,relro -Wl,-z,now -DCBF_REGEXLIB_REGEX -I/build/cbflib-0.9.7+dfsg1/include -I/build/cbflib-0.9.7+dfsg1/src -I/usr/include/hdf5/serial \ /build/cbflib-0.9.7+dfsg1/examples/testflat.c -L/build/cbflib-0.9.7+dfsg1/lib \ -lcbf -lm -L/usr/lib/i386-linux-gnu/hdf5/serial -lhdf5 -o /build/cbflib-0.9.7+dfsg1/bin/testflat mkdir -p /build/cbflib-0.9.7+dfsg1/bin gcc -g -O2 -ffile-prefix-map=/build/cbflib-0.9.7+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -Wall -D_USE_XOPEN_EXTENDED -fno-strict-aliasing -Wl,-z,relro -Wl,-z,now -DCBF_REGEXLIB_REGEX -I/build/cbflib-0.9.7+dfsg1/include -I/build/cbflib-0.9.7+dfsg1/src -I/usr/include/hdf5/serial \ /build/cbflib-0.9.7+dfsg1/examples/testflatpacked.c -L/build/cbflib-0.9.7+dfsg1/lib \ -lcbf -lm -L/usr/lib/i386-linux-gnu/hdf5/serial -lhdf5 -o /build/cbflib-0.9.7+dfsg1/bin/testflatpacked mkdir -p /build/cbflib-0.9.7+dfsg1/bin gcc -g -O2 -ffile-prefix-map=/build/cbflib-0.9.7+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -Wall -D_USE_XOPEN_EXTENDED -fno-strict-aliasing -Wl,-z,relro -Wl,-z,now -DCBF_REGEXLIB_REGEX -I/build/cbflib-0.9.7+dfsg1/include -I/build/cbflib-0.9.7+dfsg1/src -I/usr/include/hdf5/serial \ /build/cbflib-0.9.7+dfsg1/examples/testhdf5.c -L/build/cbflib-0.9.7+dfsg1/lib /build/cbflib-0.9.7+dfsg1/lib/libcbf.a \ -lm -L/usr/lib/i386-linux-gnu/hdf5/serial -lhdf5 \ -o /build/cbflib-0.9.7+dfsg1/bin/testhdf5.tmp mv /build/cbflib-0.9.7+dfsg1/bin/testhdf5.tmp /build/cbflib-0.9.7+dfsg1/bin/testhdf5 mkdir -p /build/cbflib-0.9.7+dfsg1/bin gcc -g -O2 -ffile-prefix-map=/build/cbflib-0.9.7+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -Wall -D_USE_XOPEN_EXTENDED -fno-strict-aliasing -Wl,-z,relro -Wl,-z,now -DCBF_REGEXLIB_REGEX -I/build/cbflib-0.9.7+dfsg1/include -I/build/cbflib-0.9.7+dfsg1/src -I/usr/include/hdf5/serial \ /build/cbflib-0.9.7+dfsg1/examples/test_cbf_airy_disk.c -L/build/cbflib-0.9.7+dfsg1/lib /build/cbflib-0.9.7+dfsg1/lib/libcbf.a \ -lm -o /build/cbflib-0.9.7+dfsg1/bin/test_cbf_airy_disk.tmp mv /build/cbflib-0.9.7+dfsg1/bin/test_cbf_airy_disk.tmp /build/cbflib-0.9.7+dfsg1/bin/test_cbf_airy_disk mkdir -p /build/cbflib-0.9.7+dfsg1/bin gcc -g -O2 -ffile-prefix-map=/build/cbflib-0.9.7+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -Wall -D_USE_XOPEN_EXTENDED -fno-strict-aliasing -Wl,-z,relro -Wl,-z,now -DCBF_REGEXLIB_REGEX -I/build/cbflib-0.9.7+dfsg1/include -I/build/cbflib-0.9.7+dfsg1/src -I/usr/include/hdf5/serial \ /build/cbflib-0.9.7+dfsg1/examples/cbf_testxfelread.c -L/build/cbflib-0.9.7+dfsg1/lib /build/cbflib-0.9.7+dfsg1/lib/libcbf.a \ -lm -o /build/cbflib-0.9.7+dfsg1/bin/cbf_testxfelread.tmp mv /build/cbflib-0.9.7+dfsg1/bin/cbf_testxfelread.tmp /build/cbflib-0.9.7+dfsg1/bin/cbf_testxfelread make[2]: Leaving directory '/build/cbflib-0.9.7+dfsg1' # build the python extension. dh_auto_build --buildsystem=pybuild --sourcedirectory=pycbf I: pybuild base:240: /usr/bin/python3 setup.py build /build/cbflib-0.9.7+dfsg1/pycbf/setup.py:7: DeprecationWarning: The distutils package is deprecated and slated for removal in Python 3.12. Use setuptools or check PEP 632 for potential alternatives from distutils.core import setup, Extension running build running build_py copying pycbf.py -> /build/cbflib-0.9.7+dfsg1/.pybuild/cpython3_3.11_pycbf/build running build_ext building '_pycbf' extension creating build creating build/src creating build/temp.linux-i386-3.11 i686-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/cbflib-0.9.7+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DSWIG_PYTHON_STRICT_BYTE_CHAR -I../include -I/include -I/usr/include/python3.11 -c ../src/cbf_simple.c -o build/temp.linux-i386-3.11/../src/cbf_simple.o -I/usr/include/hdf5/serial ../src/cbf_simple.c: In function 'cbf_get_array_section_pixel_sizes': ../src/cbf_simple.c:1688:23: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare] 1688 | for (ii=0; ii < (ssize_t)rank; ii++) { | ^ ../src/cbf_simple.c:1844:40: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare] 1844 | for (ii=0; ii < rank && ii < (ssize_t)(detector-> axes) && !error; ii++) { | ^ i686-linux-gnu-gcc -Wsign-compare -DNDEBUG -g -fwrapv -O2 -Wall -g -fstack-protector-strong -Wformat -Werror=format-security -g -fwrapv -O2 -g -O2 -ffile-prefix-map=/build/cbflib-0.9.7+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -DSWIG_PYTHON_STRICT_BYTE_CHAR -I../include -I/include -I/usr/include/python3.11 -c pycbf_wrap.c -o build/temp.linux-i386-3.11/pycbf_wrap.o -I/usr/include/hdf5/serial pycbf_wrap.c:4078: warning: "SWIG_PYTHON_STRICT_BYTE_CHAR" redefined 4078 | #define SWIG_PYTHON_STRICT_BYTE_CHAR | : note: this is the location of the previous definition pycbf_wrap.c: In function 'cbf_handle_struct_set_integerarray': pycbf_wrap.c:4139:15: warning: variable 'array' set but not used [-Wunused-but-set-variable] 4139 | void *array; | ^~~~~ pycbf_wrap.c:4138:21: warning: variable 'ele' set but not used [-Wunused-but-set-variable] 4138 | size_t els, ele; | ^~~ pycbf_wrap.c:4138:16: warning: variable 'els' set but not used [-Wunused-but-set-variable] 4138 | size_t els, ele; | ^~~ pycbf_wrap.c: In function 'cbf_handle_struct_set_integerarray_wdims': pycbf_wrap.c:4154:15: warning: variable 'array' set but not used [-Wunused-but-set-variable] 4154 | void *array; | ^~~~~ pycbf_wrap.c:4153:21: warning: variable 'ele' set but not used [-Wunused-but-set-variable] 4153 | size_t els, ele; | ^~~ pycbf_wrap.c:4153:16: warning: variable 'els' set but not used [-Wunused-but-set-variable] 4153 | size_t els, ele; | ^~~ pycbf_wrap.c: In function 'cbf_handle_struct_set_integerarray_wdims_fs': pycbf_wrap.c:4174:15: warning: variable 'array' set but not used [-Wunused-but-set-variable] 4174 | void *array; | ^~~~~ pycbf_wrap.c:4173:21: warning: variable 'ele' set but not used [-Wunused-but-set-variable] 4173 | size_t els, ele; | ^~~ pycbf_wrap.c:4173:16: warning: variable 'els' set but not used [-Wunused-but-set-variable] 4173 | size_t els, ele; | ^~~ pycbf_wrap.c: In function 'cbf_handle_struct_set_integerarray_wdims_sf': pycbf_wrap.c:4194:15: warning: variable 'array' set but not used [-Wunused-but-set-variable] 4194 | void *array; | ^~~~~ pycbf_wrap.c:4193:21: warning: variable 'ele' set but not used [-Wunused-but-set-variable] 4193 | size_t els, ele; | ^~~ pycbf_wrap.c:4193:16: warning: variable 'els' set but not used [-Wunused-but-set-variable] 4193 | size_t els, ele; | ^~~ pycbf_wrap.c: In function 'cbf_handle_struct_set_realarray': pycbf_wrap.c:4214:15: warning: variable 'array' set but not used [-Wunused-but-set-variable] 4214 | void *array; | ^~~~~ pycbf_wrap.c:4213:21: warning: variable 'ele' set but not used [-Wunused-but-set-variable] 4213 | size_t els, ele; | ^~~ pycbf_wrap.c:4213:16: warning: variable 'els' set but not used [-Wunused-but-set-variable] 4213 | size_t els, ele; | ^~~ pycbf_wrap.c: In function 'cbf_handle_struct_set_realarray_wdims': pycbf_wrap.c:4229:15: warning: variable 'array' set but not used [-Wunused-but-set-variable] 4229 | void *array; | ^~~~~ pycbf_wrap.c:4228:21: warning: variable 'ele' set but not used [-Wunused-but-set-variable] 4228 | size_t els, ele; | ^~~ pycbf_wrap.c:4228:16: warning: variable 'els' set but not used [-Wunused-but-set-variable] 4228 | size_t els, ele; | ^~~ pycbf_wrap.c: In function 'cbf_handle_struct_set_realarray_wdims_fs': pycbf_wrap.c:4249:15: warning: variable 'array' set but not used [-Wunused-but-set-variable] 4249 | void *array; | ^~~~~ pycbf_wrap.c:4248:21: warning: variable 'ele' set but not used [-Wunused-but-set-variable] 4248 | size_t els, ele; | ^~~ pycbf_wrap.c:4248:16: warning: variable 'els' set but not used [-Wunused-but-set-variable] 4248 | size_t els, ele; | ^~~ pycbf_wrap.c: In function 'cbf_handle_struct_set_realarray_wdims_sf': pycbf_wrap.c:4269:15: warning: variable 'array' set but not used [-Wunused-but-set-variable] 4269 | void *array; | ^~~~~ pycbf_wrap.c:4268:21: warning: variable 'ele' set but not used [-Wunused-but-set-variable] 4268 | size_t els, ele; | ^~~ pycbf_wrap.c:4268:16: warning: variable 'els' set but not used [-Wunused-but-set-variable] 4268 | size_t els, ele; | ^~~ pycbf_wrap.c: In function 'cbf_handle_struct_set_image': pycbf_wrap.c:4774:15: warning: variable 'array' set but not used [-Wunused-but-set-variable] 4774 | void *array; | ^~~~~ pycbf_wrap.c:4772:16: warning: variable 'els' set but not used [-Wunused-but-set-variable] 4772 | size_t els; | ^~~ pycbf_wrap.c: In function 'cbf_handle_struct_set_image_fs': pycbf_wrap.c:4790:15: warning: variable 'array' set but not used [-Wunused-but-set-variable] 4790 | void *array; | ^~~~~ pycbf_wrap.c:4788:16: warning: variable 'els' set but not used [-Wunused-but-set-variable] 4788 | size_t els; | ^~~ pycbf_wrap.c: In function 'cbf_handle_struct_set_image_sf': pycbf_wrap.c:4806:15: warning: variable 'array' set but not used [-Wunused-but-set-variable] 4806 | void *array; | ^~~~~ pycbf_wrap.c:4804:16: warning: variable 'els' set but not used [-Wunused-but-set-variable] 4804 | size_t els; | ^~~ pycbf_wrap.c: In function 'cbf_handle_struct_set_real_image': pycbf_wrap.c:4822:15: warning: variable 'array' set but not used [-Wunused-but-set-variable] 4822 | void *array; | ^~~~~ pycbf_wrap.c:4820:16: warning: variable 'els' set but not used [-Wunused-but-set-variable] 4820 | size_t els; | ^~~ pycbf_wrap.c: In function 'cbf_handle_struct_set_real_image_fs': pycbf_wrap.c:4838:15: warning: variable 'array' set but not used [-Wunused-but-set-variable] 4838 | void *array; | ^~~~~ pycbf_wrap.c:4836:16: warning: variable 'els' set but not used [-Wunused-but-set-variable] 4836 | size_t els; | ^~~ pycbf_wrap.c: In function 'cbf_handle_struct_set_real_image_sf': pycbf_wrap.c:4854:15: warning: variable 'array' set but not used [-Wunused-but-set-variable] 4854 | void *array; | ^~~~~ pycbf_wrap.c:4852:16: warning: variable 'els' set but not used [-Wunused-but-set-variable] 4852 | size_t els; | ^~~ pycbf_wrap.c: In function 'cbf_handle_struct_set_3d_image': pycbf_wrap.c:4870:15: warning: variable 'array' set but not used [-Wunused-but-set-variable] 4870 | void *array; | ^~~~~ pycbf_wrap.c:4868:16: warning: variable 'els' set but not used [-Wunused-but-set-variable] 4868 | size_t els; | ^~~ pycbf_wrap.c: In function 'cbf_handle_struct_set_3d_image_fs': pycbf_wrap.c:4886:15: warning: variable 'array' set but not used [-Wunused-but-set-variable] 4886 | void *array; | ^~~~~ pycbf_wrap.c:4884:16: warning: variable 'els' set but not used [-Wunused-but-set-variable] 4884 | size_t els; | ^~~ pycbf_wrap.c: In function 'cbf_handle_struct_set_3d_image_sf': pycbf_wrap.c:4902:15: warning: variable 'array' set but not used [-Wunused-but-set-variable] 4902 | void *array; | ^~~~~ pycbf_wrap.c:4900:16: warning: variable 'els' set but not used [-Wunused-but-set-variable] 4900 | size_t els; | ^~~ pycbf_wrap.c: In function 'cbf_handle_struct_set_real_3d_image': pycbf_wrap.c:4918:15: warning: variable 'array' set but not used [-Wunused-but-set-variable] 4918 | void *array; | ^~~~~ pycbf_wrap.c:4916:16: warning: variable 'els' set but not used [-Wunused-but-set-variable] 4916 | size_t els; | ^~~ pycbf_wrap.c: In function 'cbf_handle_struct_set_real_3d_image_fs': pycbf_wrap.c:4934:15: warning: variable 'array' set but not used [-Wunused-but-set-variable] 4934 | void *array; | ^~~~~ pycbf_wrap.c:4932:16: warning: variable 'els' set but not used [-Wunused-but-set-variable] 4932 | size_t els; | ^~~ pycbf_wrap.c: In function 'cbf_handle_struct_set_real_3d_image_sf': pycbf_wrap.c:4950:15: warning: variable 'array' set but not used [-Wunused-but-set-variable] 4950 | void *array; | ^~~~~ pycbf_wrap.c:4948:16: warning: variable 'els' set but not used [-Wunused-but-set-variable] 4948 | size_t els; | ^~~ pycbf_wrap.c: In function '_wrap_cbf_positioner_struct_matrix_set': pycbf_wrap.c:6313:13: warning: the comparison will always evaluate as 'true' for the pointer operand in 'arg2 + (sizetype)(ii * 32)' must not be NULL [-Waddress] 6313 | if (arg2[ii]) { | ^~~~ pycbf_wrap.c: At top level: pycbf_wrap.c:3155:16: warning: 'convert_iarray' defined but not used [-Wunused-function] 3155 | static int convert_iarray(PyObject *input, int *ptr, int size) { | ^~~~~~~~~~~~~~ pycbf_wrap.c:3131:17: warning: 'convert_larray' defined but not used [-Wunused-function] 3131 | static long convert_larray(PyObject *input, long *ptr, int size) { | ^~~~~~~~~~~~~~ i686-linux-gnu-gcc -shared -Wl,-O1 -Wl,-Bsymbolic-functions -g -fwrapv -O2 -Wl,-z,relro -Wl,-z,now -g -O2 -ffile-prefix-map=/build/cbflib-0.9.7+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 build/temp.linux-i386-3.11/../src/cbf_simple.o build/temp.linux-i386-3.11/pycbf_wrap.o -L../solib/ -L../lib/ -L/build/cbflib-0.9.7+dfsg1/lib -lcbf -o /build/cbflib-0.9.7+dfsg1/.pybuild/cpython3_3.11_pycbf/build/_pycbf.cpython-311-i386-linux-gnu.so make[1]: Leaving directory '/build/cbflib-0.9.7+dfsg1' debian/rules override_dh_auto_build-indep make[1]: Entering directory '/build/cbflib-0.9.7+dfsg1' # nothing to build here make[1]: Leaving directory '/build/cbflib-0.9.7+dfsg1' create-stamp debian/debhelper-build-stamp dh_testroot -O--no-parallel dh_prep -O--no-parallel debian/rules override_dh_auto_install-arch make[1]: Entering directory '/build/cbflib-0.9.7+dfsg1' # install the C/C++ library dh_auto_install make -j1 install DESTDIR=/build/cbflib-0.9.7\+dfsg1/debian/tmp AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[2]: Entering directory '/build/cbflib-0.9.7+dfsg1' mkdir -p /build/cbflib-0.9.7+dfsg1/bin g++ -g -O2 -ffile-prefix-map=/build/cbflib-0.9.7+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -Wall -D_USE_XOPEN_EXTENDED -fno-strict-aliasing -Wl,-z,relro -Wl,-z,now -DCBF_REGEXLIB_REGEX -I/build/cbflib-0.9.7+dfsg1/include -I/build/cbflib-0.9.7+dfsg1/src -I/usr/include/hdf5/serial \ /build/cbflib-0.9.7+dfsg1/examples/cif2c.c -L/build/cbflib-0.9.7+dfsg1/lib \ -lcbf -lm -L/usr/lib/i386-linux-gnu/hdf5/serial -lhdf5 -o /build/cbflib-0.9.7+dfsg1/bin/cif2c mkdir -p /build/cbflib-0.9.7+dfsg1/bin g++ -g -O2 -ffile-prefix-map=/build/cbflib-0.9.7+dfsg1=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -O3 -Wall -D_USE_XOPEN_EXTENDED -fno-strict-aliasing -Wl,-z,relro -Wl,-z,now -DCBF_REGEXLIB_REGEX -I/build/cbflib-0.9.7+dfsg1/include -I/build/cbflib-0.9.7+dfsg1/src -I/usr/include/hdf5/serial \ /build/cbflib-0.9.7+dfsg1/examples/testcell.C -L/build/cbflib-0.9.7+dfsg1/lib \ -lcbf -lm -L/usr/lib/i386-linux-gnu/hdf5/serial -lhdf5 -o /build/cbflib-0.9.7+dfsg1/bin/testcell mkdir -p /build/cbflib-0.9.7+dfsg1/debian/tmp/usr mkdir -p /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/lib/i386-linux-gnu mkdir -p /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin mkdir -p /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/include mkdir -p /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/include/cbflib chmod 755 /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/lib/i386-linux-gnu/libcbf.a chmod: cannot access '/build/cbflib-0.9.7+dfsg1/debian/tmp/usr/lib/i386-linux-gnu/libcbf.a': No such file or directory make[2]: [Makefile:1235: baseinstall] Error 1 (ignored) cp /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/lib/i386-linux-gnu/libcbf.a /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/lib/i386-linux-gnu/libcbf_old.a cp: cannot stat '/build/cbflib-0.9.7+dfsg1/debian/tmp/usr/lib/i386-linux-gnu/libcbf.a': No such file or directory make[2]: [Makefile:1236: baseinstall] Error 1 (ignored) cp /build/cbflib-0.9.7+dfsg1/lib/libcbf.a /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/lib/i386-linux-gnu/libcbf.a cp /build/cbflib-0.9.7+dfsg1/solib/libcbf.so /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/lib/i386-linux-gnu/libcbf.so.1.0.0 ln -s -f -r /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/lib/i386-linux-gnu/libcbf.so.1.0.0 /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/lib/i386-linux-gnu/libcbf.so.1 ln -s -f -r /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/lib/i386-linux-gnu/libcbf.so.1.0.0 /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/lib/i386-linux-gnu/libcbf.so cp /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/cbflib.ini /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/cbflib.ini_old cp: cannot stat '/build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/cbflib.ini': No such file or directory make[2]: [Makefile:1241: baseinstall] Error 1 (ignored) echo "LD_LIBRARY_PATH=/build/cbflib-0.9.7+dfsg1/debian/tmp/usr/LIB:/build/cbflib-0.9.7+dfsg1/lib:$LD_LIBRARY_PATH;export LD_LIBRARY_PATH;" > /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/cbflib.ini echo "HDF5_PLUGIN_PATH=/build/cbflib-0.9.7+dfsg1/debian/tmp/usr/lib:$HDF5_PLUGIN_PATH" >> /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/cbflib.ini echo "export HDF5_PLUGIN_PATH" >> /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/cbflib.ini cp /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/adscimg2cbf /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/adscimg2cbf_old cp: cannot stat '/build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/adscimg2cbf': No such file or directory make[2]: [Makefile:1245: baseinstall] Error 1 (ignored) cp /build/cbflib-0.9.7+dfsg1/bin/adscimg2cbf /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/adscimg2cbf cp /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/cbf2adscimg /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/cbf2adscimg_old cp: cannot stat '/build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/cbf2adscimg': No such file or directory make[2]: [Makefile:1247: baseinstall] Error 1 (ignored) cp /build/cbflib-0.9.7+dfsg1/bin/cbf2adscimg /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/cbf2adscimg cp /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/cbf_standardize_numbers \ /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/cbf_standardize_numbers_old cp: cannot stat '/build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/cbf_standardize_numbers': No such file or directory make[2]: [Makefile:1249: baseinstall] Error 1 (ignored) cp /build/cbflib-0.9.7+dfsg1/bin/cbf_standardize_numbers /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/cbf_standardize_numbers cp /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/convert_image /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/convert_image_old cp: cannot stat '/build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/convert_image': No such file or directory make[2]: [Makefile:1251: baseinstall] Error 1 (ignored) cp /build/cbflib-0.9.7+dfsg1/bin/convert_image /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/convert_image cp /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/convert_minicbf /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/convert_minicbf_old cp: cannot stat '/build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/convert_minicbf': No such file or directory make[2]: [Makefile:1253: baseinstall] Error 1 (ignored) cp /build/cbflib-0.9.7+dfsg1/bin/convert_minicbf /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/convert_minicbf cp /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/makecbf /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/makecbf_old cp: cannot stat '/build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/makecbf': No such file or directory make[2]: [Makefile:1255: baseinstall] Error 1 (ignored) cp /build/cbflib-0.9.7+dfsg1/bin/makecbf /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/makecbf cp /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/img2cif /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/img2cif_old cp: cannot stat '/build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/img2cif': No such file or directory make[2]: [Makefile:1257: baseinstall] Error 1 (ignored) cp /build/cbflib-0.9.7+dfsg1/bin/img2cif /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/img2cif cp /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/cif2cbf /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/cif2cbf_old cp: cannot stat '/build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/cif2cbf': No such file or directory make[2]: [Makefile:1259: baseinstall] Error 1 (ignored) cp /build/cbflib-0.9.7+dfsg1/bin/cif2cbf /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/cif2cbf cp /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/minicbf2nexus /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/minicbf2nexus_old cp: cannot stat '/build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/minicbf2nexus': No such file or directory make[2]: [Makefile:1261: baseinstall] Error 1 (ignored) cp /build/cbflib-0.9.7+dfsg1/bin/minicbf2nexus /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/minicbf2nexus cp /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/cbf2nexus /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/cbf2nexus_old cp: cannot stat '/build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/cbf2nexus': No such file or directory make[2]: [Makefile:1263: baseinstall] Error 1 (ignored) cp /build/cbflib-0.9.7+dfsg1/bin/cbf2nexus /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/cbf2nexus cp /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/nexus2cbf /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/nexus2cbf_old cp: cannot stat '/build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/nexus2cbf': No such file or directory make[2]: [Makefile:1265: baseinstall] Error 1 (ignored) cp /build/cbflib-0.9.7+dfsg1/bin/nexus2cbf /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/nexus2cbf cp /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/roi_peaksearch /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/roi_peaksearch_old cp: cannot stat '/build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/roi_peaksearch': No such file or directory make[2]: [Makefile:1267: baseinstall] Error 1 (ignored) cp /build/cbflib-0.9.7+dfsg1/bin/roi_peaksearch /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/roi_peaksearch cp /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/sequence_match /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/sequence_match_old cp: cannot stat '/build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/sequence_match': No such file or directory make[2]: [Makefile:1269: baseinstall] Error 1 (ignored) cp /build/cbflib-0.9.7+dfsg1/bin/sequence_match /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/sequence_match cp /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/testalloc /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/testalloc_old cp: cannot stat '/build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/testalloc': No such file or directory make[2]: [Makefile:1271: baseinstall] Error 1 (ignored) cp /build/cbflib-0.9.7+dfsg1/bin/testalloc /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/testalloc cp /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/arvai_test /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/arvai_test_old cp: cannot stat '/build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/arvai_test': No such file or directory make[2]: [Makefile:1273: baseinstall] Error 1 (ignored) cp /build/cbflib-0.9.7+dfsg1/bin/arvai_test /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/arvai_test cp /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/cif2c /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/cif2c_old cp: cannot stat '/build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/cif2c': No such file or directory make[2]: [Makefile:1275: baseinstall] Error 1 (ignored) cp /build/cbflib-0.9.7+dfsg1/bin/cif2c /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/cif2c cp /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/testreals /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/testreals_old cp: cannot stat '/build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/testreals': No such file or directory make[2]: [Makefile:1277: baseinstall] Error 1 (ignored) cp /build/cbflib-0.9.7+dfsg1/bin/testreals /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/testreals cp /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/testflat /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/testflat_old cp: cannot stat '/build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/testflat': No such file or directory make[2]: [Makefile:1279: baseinstall] Error 1 (ignored) cp /build/cbflib-0.9.7+dfsg1/bin/testflat /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/testflat cp /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/testflatpacked /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/testflatpacked_old cp: cannot stat '/build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/testflatpacked': No such file or directory make[2]: [Makefile:1281: baseinstall] Error 1 (ignored) cp /build/cbflib-0.9.7+dfsg1/bin/testflatpacked /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/testflatpacked #-cp /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/tiff2cbf /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/tiff2cbf_old #cp /build/cbflib-0.9.7+dfsg1/bin/tiff2cbf /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/tiff2cbf cp /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/test_cbf_airy_disk /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/test_cbf_airy_disk_old cp: cannot stat '/build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/test_cbf_airy_disk': No such file or directory make[2]: [Makefile:1285: baseinstall] Error 1 (ignored) cp /build/cbflib-0.9.7+dfsg1/bin/test_cbf_airy_disk /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/test_cbf_airy_disk cp /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/test_cbf_airy_disk /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/test_cbf_airy_disk_old cp /build/cbflib-0.9.7+dfsg1/bin/test_cbf_airy_disk /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/test_cbf_airy_disk cp /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/testhdf5 /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/testhdf5_old cp: cannot stat '/build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/testhdf5': No such file or directory make[2]: [Makefile:1289: baseinstall] Error 1 (ignored) cp /build/cbflib-0.9.7+dfsg1/bin/testhdf5 /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/testhdf5 cp /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/batch_convert_minicbf.sh /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/batch_convert_minicbf_old.sh cp: cannot stat '/build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/batch_convert_minicbf.sh': No such file or directory make[2]: [Makefile:1291: baseinstall] Error 1 (ignored) cp /build/cbflib-0.9.7+dfsg1/examples/batch_convert_minicbf.sh /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/batch_convert_minicbf.sh chmod -R 755 /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/include/cbflib rm -rf /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/include/cbflib_old cp -r /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/include/cbflib /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/include/cbflib_old rm -rf /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/include/cbflib cp -r /build/cbflib-0.9.7+dfsg1/include /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/include/cbflib chmod 644 /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/lib/i386-linux-gnu/libcbf.a chmod 644 /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/lib/i386-linux-gnu/libimg.a chmod: cannot access '/build/cbflib-0.9.7+dfsg1/debian/tmp/usr/lib/i386-linux-gnu/libimg.a': No such file or directory make[2]: [Makefile:1299: baseinstall] Error 1 (ignored) chmod 644 /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/lib/i386-linux-gnu/libfcb.a chmod: cannot access '/build/cbflib-0.9.7+dfsg1/debian/tmp/usr/lib/i386-linux-gnu/libfcb.a': No such file or directory make[2]: [Makefile:1300: baseinstall] Error 1 (ignored) chmod 755 /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/lib/i386-linux-gnu/libcbf.so chmod 755 /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/lib/i386-linux-gnu/libimg.so chmod: cannot access '/build/cbflib-0.9.7+dfsg1/debian/tmp/usr/lib/i386-linux-gnu/libimg.so': No such file or directory make[2]: [Makefile:1302: baseinstall] Error 1 (ignored) chmod 755 /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/lib/i386-linux-gnu/libfcb.so chmod: cannot access '/build/cbflib-0.9.7+dfsg1/debian/tmp/usr/lib/i386-linux-gnu/libfcb.so': No such file or directory make[2]: [Makefile:1303: baseinstall] Error 1 (ignored) chmod 755 /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/arvai_test chmod 755 /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/cbf2nexus chmod 755 /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/cbf_standardize_numbers chmod 755 /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/cif2c chmod 755 /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/cif2cbf chmod 755 /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/convert_image chmod 755 /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/convert_minicbf chmod 755 /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/img2cif chmod 755 /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/makecbf chmod 755 /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/minicbf2nexus chmod 755 /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/nexus2cbf chmod 755 /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/roi_peaksearch chmod 755 /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/sequence_match chmod 755 /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/testalloc chmod 755 /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/testflat chmod 755 /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/testflatpacked chmod 755 /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/testhdf5 chmod 755 /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/testreals chmod 755 /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/test_cbf_airy_disk chmod 755 /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/bin/batch_convert_minicbf.sh chmod 644 /build/cbflib-0.9.7+dfsg1/debian/tmp/usr/include/cbflib/*.h make[2]: Leaving directory '/build/cbflib-0.9.7+dfsg1' # install the python extension dh_auto_install --buildsystem=pybuild --sourcedirectory=pycbf I: pybuild base:240: /usr/bin/python3 setup.py install --root /build/cbflib-0.9.7+dfsg1/debian/python3-pycbf /build/cbflib-0.9.7+dfsg1/pycbf/setup.py:7: DeprecationWarning: The distutils package is deprecated and slated for removal in Python 3.12. Use setuptools or check PEP 632 for potential alternatives from distutils.core import setup, Extension running install running build running build_py running build_ext running install_lib creating /build/cbflib-0.9.7+dfsg1/debian/python3-pycbf creating /build/cbflib-0.9.7+dfsg1/debian/python3-pycbf/usr creating /build/cbflib-0.9.7+dfsg1/debian/python3-pycbf/usr/lib creating /build/cbflib-0.9.7+dfsg1/debian/python3-pycbf/usr/lib/python3.11 creating /build/cbflib-0.9.7+dfsg1/debian/python3-pycbf/usr/lib/python3.11/dist-packages copying /build/cbflib-0.9.7+dfsg1/.pybuild/cpython3_3.11_pycbf/build/_pycbf.cpython-311-i386-linux-gnu.so -> /build/cbflib-0.9.7+dfsg1/debian/python3-pycbf/usr/lib/python3.11/dist-packages copying /build/cbflib-0.9.7+dfsg1/.pybuild/cpython3_3.11_pycbf/build/pycbf.py -> /build/cbflib-0.9.7+dfsg1/debian/python3-pycbf/usr/lib/python3.11/dist-packages byte-compiling /build/cbflib-0.9.7+dfsg1/debian/python3-pycbf/usr/lib/python3.11/dist-packages/pycbf.py to pycbf.cpython-311.pyc running install_egg_info Writing /build/cbflib-0.9.7+dfsg1/debian/python3-pycbf/usr/lib/python3.11/dist-packages/_pycbf-0.0.0.egg-info make[1]: Leaving directory '/build/cbflib-0.9.7+dfsg1' debian/rules override_dh_auto_install-indep make[1]: Entering directory '/build/cbflib-0.9.7+dfsg1' # nothing to install here make[1]: Leaving directory '/build/cbflib-0.9.7+dfsg1' debian/rules override_dh_install-arch make[1]: Entering directory '/build/cbflib-0.9.7+dfsg1' # cbflib-bin dh_install -p cbflib-bin usr/bin/cbf2nexus dh_install -p cbflib-bin usr/bin/cif2cbf dh_install -p cbflib-bin usr/bin/convert_image dh_install -p cbflib-bin usr/bin/img2cif dh_install -p cbflib-bin usr/bin/makecbf # libcbf-dev dh_install -p libcbf-dev usr/include/cbflib/* dh_install -p libcbf-dev usr/lib/*/lib*.a dh_install -p libcbf-dev usr/lib/*/lib*.so # libcbf1 dh_install -p libcbf1 usr/lib/*/libcbf.so.* # Exclude duplicates (lintian check duplicate-files) dh_install -Xcif_img_1.3.2_22Jun05.html -Xcif_img_1.3.1.html make[1]: Leaving directory '/build/cbflib-0.9.7+dfsg1' debian/rules override_dh_install-indep make[1]: Entering directory '/build/cbflib-0.9.7+dfsg1' # cbflib-doc dh_install -p cbflib-doc doc/*.html usr/share/doc/cbflib-doc/html make[1]: Leaving directory '/build/cbflib-0.9.7+dfsg1' debian/rules override_dh_installdocs make[1]: Entering directory '/build/cbflib-0.9.7+dfsg1' # cbflib-doc dh_installdocs -p cbflib-doc html_graphics dh_installdocs: warning: Cannot auto-detect main package for cbflib-doc. If the default is wrong, please use --doc-main-package # libcbf-dev dh_installdocs -p libcbf-dev README dh_installdocs make[1]: Leaving directory '/build/cbflib-0.9.7+dfsg1' dh_installchangelogs -O--no-parallel debian/rules override_dh_installman make[1]: Entering directory '/build/cbflib-0.9.7+dfsg1' dh_installman -p cbflib-bin debian/manpages/* make[1]: Leaving directory '/build/cbflib-0.9.7+dfsg1' dh_python3 -O--no-parallel dh_installsystemduser -O--no-parallel dh_perl -O--no-parallel dh_link -O--no-parallel dh_strip_nondeterminism -O--no-parallel dh_compress -O--no-parallel dh_fixperms -O--no-parallel dh_missing -O--no-parallel dh_dwz -a -O--no-parallel dh_strip -a -O--no-parallel dh_makeshlibs -a -O--no-parallel dh_shlibdeps -a -O--no-parallel dh_installdeb -O--no-parallel dh_gencontrol -O--no-parallel dh_md5sums -O--no-parallel dh_builddeb -O--no-parallel dpkg-deb: building package 'cbflib-bin' in '../cbflib-bin_0.9.7+dfsg1-2_i386.deb'. dpkg-deb: building package 'libcbf1-dbgsym' in '../libcbf1-dbgsym_0.9.7+dfsg1-2_i386.deb'. dpkg-deb: building package 'python3-pycbf-dbgsym' in '../python3-pycbf-dbgsym_0.9.7+dfsg1-2_i386.deb'. dpkg-deb: building package 'cbflib-bin-dbgsym' in '../cbflib-bin-dbgsym_0.9.7+dfsg1-2_i386.deb'. dpkg-deb: building package 'libcbf-dev' in '../libcbf-dev_0.9.7+dfsg1-2_i386.deb'. dpkg-deb: building package 'python3-pycbf' in '../python3-pycbf_0.9.7+dfsg1-2_i386.deb'. dpkg-deb: building package 'cbflib-doc' in '../cbflib-doc_0.9.7+dfsg1-2_all.deb'. dpkg-deb: building package 'libcbf1' in '../libcbf1_0.9.7+dfsg1-2_i386.deb'. dpkg-genbuildinfo --build=binary -O../cbflib_0.9.7+dfsg1-2_i386.buildinfo dpkg-genchanges --build=binary -O../cbflib_0.9.7+dfsg1-2_i386.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) dpkg-genchanges: info: not including original source code in upload I: copying local configuration I: unmounting dev/ptmx filesystem I: unmounting dev/pts filesystem I: unmounting dev/shm filesystem I: unmounting proc filesystem I: unmounting sys filesystem I: cleaning the build env I: removing directory /srv/workspace/pbuilder/19863 and its subdirectories I: Current time: Mon Jun 12 09:08:16 -12 2023 I: pbuilder-time-stamp: 1686604096 Mon Jun 12 21:08:17 UTC 2023 I: 1st build successful. Starting 2nd build on remote node ionos6-i386.debian.net. Mon Jun 12 21:08:17 UTC 2023 I: Preparing to do remote build '2' on ionos6-i386.debian.net. Mon Jun 12 21:10:43 UTC 2023 I: Deleting $TMPDIR on ionos6-i386.debian.net. Mon Jun 12 21:10:43 UTC 2023 I: cbflib_0.9.7+dfsg1-2_i386.changes: Format: 1.8 Date: Wed, 10 Aug 2022 18:59:21 +0200 Source: cbflib Binary: cbflib-bin cbflib-bin-dbgsym cbflib-doc libcbf-dev libcbf1 libcbf1-dbgsym python3-pycbf python3-pycbf-dbgsym Architecture: i386 all Version: 0.9.7+dfsg1-2 Distribution: unstable Urgency: medium Maintainer: Debian PaN Maintainers Changed-By: Picca Frédéric-Emmanuel Description: cbflib-bin - utilities to manipulate CBF files cbflib-doc - documentation for CBFlib libcbf-dev - development files for CBFlib libcbf1 - shared library supporting CBFlib python3-pycbf - Python modules for CBFLib -- Python3 Changes: cbflib (0.9.7+dfsg1-2) unstable; urgency=medium . * Upstream build pycbf with -DSWIG_PYTHON_STRICT_BYTE_CHAR. Checksums-Sha1: a092c8eb3814f50d77f024b95c63d7b26b8a797d 3225240 cbflib-bin-dbgsym_0.9.7+dfsg1-2_i386.deb 03514e4d15f7a0a4a97056ad0dcfd35c8742e053 551116 cbflib-bin_0.9.7+dfsg1-2_i386.deb 319f22d02a364bfc4233ef3dd1431b2e27228ea9 343996 cbflib-doc_0.9.7+dfsg1-2_all.deb 58500a7e64322e59a4e31473735d8404609c1a74 8912 cbflib_0.9.7+dfsg1-2_i386.buildinfo c653cb39f318fc5c136cd55f56eb707d53724875 486476 libcbf-dev_0.9.7+dfsg1-2_i386.deb c7fbc392dc6167e89141ca0a5609130b6cd20dda 809092 libcbf1-dbgsym_0.9.7+dfsg1-2_i386.deb e79ff9c6ec7662f59fc47c313543703ff9afce1e 380472 libcbf1_0.9.7+dfsg1-2_i386.deb e37985b90c6943fd492c094c33a5a4ac531466c6 445500 python3-pycbf-dbgsym_0.9.7+dfsg1-2_i386.deb 956476152c163302d064158c8ad71f931ba6d8ea 165764 python3-pycbf_0.9.7+dfsg1-2_i386.deb Checksums-Sha256: b1f3a72b8977268179509846b4bd09ecd01534adf8c70783e7ec8d4b6123c9cb 3225240 cbflib-bin-dbgsym_0.9.7+dfsg1-2_i386.deb 3d3d1abbf19adcf7e8ac3ed017eac0b6fd802aac0f019f7de5e8695330fca994 551116 cbflib-bin_0.9.7+dfsg1-2_i386.deb 2a9570857ab219924cc57f586205866a8e5943c007a21c2d573fc1662e638fb6 343996 cbflib-doc_0.9.7+dfsg1-2_all.deb 8ef1f4eace9c43826129bd5da0d9e8b7e1833769ba21afda7848e7bdb402e90c 8912 cbflib_0.9.7+dfsg1-2_i386.buildinfo b6bbb7ed4670e805cb0606305abcdec8f0f312fb5818b0f585e380398aef53f9 486476 libcbf-dev_0.9.7+dfsg1-2_i386.deb 1594fa6a551e11ac93693189692edb8519e10c34dfa3ba3083c7a9596f854fba 809092 libcbf1-dbgsym_0.9.7+dfsg1-2_i386.deb 2f76e451f8eecc28d3bcfe0c193150685e05d2599027a664d19d9ce0930c607b 380472 libcbf1_0.9.7+dfsg1-2_i386.deb d57094e6263c75393dc6829fece6541a53331c94a3f2ac5a3053dc002687476b 445500 python3-pycbf-dbgsym_0.9.7+dfsg1-2_i386.deb 12518c2bb74ffe1cc61681490c2c8ced4d59d870b852b1c01c472f0f64e85b14 165764 python3-pycbf_0.9.7+dfsg1-2_i386.deb Files: b715407577cf9028a2e17d08607141b2 3225240 debug optional cbflib-bin-dbgsym_0.9.7+dfsg1-2_i386.deb 5b47c7e8f8893728e14725fdb572943e 551116 science optional cbflib-bin_0.9.7+dfsg1-2_i386.deb 7e7627807ceae711311baf67971e8580 343996 doc optional cbflib-doc_0.9.7+dfsg1-2_all.deb 6908f05b46331ffe868bc2ea4e2ffa78 8912 science optional cbflib_0.9.7+dfsg1-2_i386.buildinfo c9c54668bafd87c3838720ab60fa8fa1 486476 libdevel optional libcbf-dev_0.9.7+dfsg1-2_i386.deb ef7e43220345465f37c47c4c3a3e2a42 809092 debug optional libcbf1-dbgsym_0.9.7+dfsg1-2_i386.deb 2452e5ef2f7c02826b284b032a4c4c8c 380472 libs optional libcbf1_0.9.7+dfsg1-2_i386.deb d7df9625717157e51b614ba0ebf67e60 445500 debug optional python3-pycbf-dbgsym_0.9.7+dfsg1-2_i386.deb b90c4734d24f98cdc109d119d949e259 165764 python optional python3-pycbf_0.9.7+dfsg1-2_i386.deb Mon Jun 12 21:10:44 UTC 2023 I: diffoscope 242 will be used to compare the two builds: # Profiling output for: /usr/bin/diffoscope --timeout 7200 --html /srv/reproducible-results/rbuild-debian/r-b-build.GPOBzfZj/cbflib_0.9.7+dfsg1-2.diffoscope.html --text /srv/reproducible-results/rbuild-debian/r-b-build.GPOBzfZj/cbflib_0.9.7+dfsg1-2.diffoscope.txt --json /srv/reproducible-results/rbuild-debian/r-b-build.GPOBzfZj/cbflib_0.9.7+dfsg1-2.diffoscope.json --profile=- /srv/reproducible-results/rbuild-debian/r-b-build.GPOBzfZj/b1/cbflib_0.9.7+dfsg1-2_i386.changes /srv/reproducible-results/rbuild-debian/r-b-build.GPOBzfZj/b2/cbflib_0.9.7+dfsg1-2_i386.changes ## command (total time: 0.000s) 0.000s 1 call cmp (internal) ## has_same_content_as (total time: 0.000s) 0.000s 1 call abc.DotChangesFile ## main (total time: 0.388s) 0.388s 2 calls outputs 0.000s 1 call cleanup ## recognizes (total time: 0.087s) 0.087s 12 calls diffoscope.comparators.binary.FilesystemFile 0.000s 10 calls abc.DotChangesFile ## specialize (total time: 0.000s) 0.000s 1 call specialize Mon Jun 12 21:10:45 UTC 2023 I: diffoscope 242 found no differences in the changes files, and a .buildinfo file also exists. Mon Jun 12 21:10:45 UTC 2023 I: cbflib from bookworm built successfully and reproducibly on i386. Mon Jun 12 21:10:47 UTC 2023 I: Submitting .buildinfo files to external archives: Mon Jun 12 21:10:47 UTC 2023 I: Submitting 12K b1/cbflib_0.9.7+dfsg1-2_i386.buildinfo.asc Mon Jun 12 21:10:48 UTC 2023 I: Submitting 12K b2/cbflib_0.9.7+dfsg1-2_i386.buildinfo.asc Mon Jun 12 21:10:49 UTC 2023 I: Done submitting .buildinfo files to http://buildinfo.debian.net/api/submit. Mon Jun 12 21:10:49 UTC 2023 I: Done submitting .buildinfo files. Mon Jun 12 21:10:49 UTC 2023 I: Removing signed cbflib_0.9.7+dfsg1-2_i386.buildinfo.asc files: removed './b1/cbflib_0.9.7+dfsg1-2_i386.buildinfo.asc' removed './b2/cbflib_0.9.7+dfsg1-2_i386.buildinfo.asc'